ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags1b16
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1GSTH2_ORYSA (O82451) Probable glutathione S-transferase GSTF2 (E... 44 1e-04
2GSTH1_ORYSA (O65857) Probable glutathione S-transferase GSTF1 (E... 43 3e-04
3GSTF1_MAIZE (P12653) Glutathione S-transferase I (EC 2.5.1.18) (... 42 7e-04
4GSTF2_WHEAT (P30111) Glutathione S-transferase 2 (EC 2.5.1.18) (... 35 0.047
5GSTF1_WHEAT (P30110) Glutathione S-transferase 1 (EC 2.5.1.18) (... 35 0.061
6GSTF4_MAIZE (P46420) Glutathione S-transferase IV (EC 2.5.1.18) ... 29 3.3
7GSTF_HYOMU (P46423) Glutathione S-transferase (EC 2.5.1.18) (GST... 29 4.4

>GSTH2_ORYSA (O82451) Probable glutathione S-transferase GSTF2 (EC 2.5.1.18)|
           (GST-II)
          Length = 214

 Score = 43.9 bits (102), Expect = 1e-04
 Identities = 16/20 (80%), Positives = 19/20 (95%)
 Frame = +3

Query: 3   PYASLFDAYPHVKAWWTDLL 62
           P+AS+ DAYPHVKAWWTDL+
Sbjct: 179 PHASVLDAYPHVKAWWTDLM 198



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>GSTH1_ORYSA (O65857) Probable glutathione S-transferase GSTF1 (EC 2.5.1.18)|
           (GST-I)
          Length = 219

 Score = 42.7 bits (99), Expect = 3e-04
 Identities = 16/20 (80%), Positives = 18/20 (90%)
 Frame = +3

Query: 3   PYASLFDAYPHVKAWWTDLL 62
           PYASLFD+YPHVKAWW  L+
Sbjct: 183 PYASLFDSYPHVKAWWERLM 202



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>GSTF1_MAIZE (P12653) Glutathione S-transferase I (EC 2.5.1.18) (GST-I) (GST-29)|
           (GST class-phi)
          Length = 213

 Score = 41.6 bits (96), Expect = 7e-04
 Identities = 15/20 (75%), Positives = 18/20 (90%)
 Frame = +3

Query: 3   PYASLFDAYPHVKAWWTDLL 62
           PYAS+ DAYPHVKAWW+ L+
Sbjct: 178 PYASVLDAYPHVKAWWSGLM 197



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>GSTF2_WHEAT (P30111) Glutathione S-transferase 2 (EC 2.5.1.18) (GST class-phi)|
          Length = 291

 Score = 35.4 bits (80), Expect = 0.047
 Identities = 13/20 (65%), Positives = 15/20 (75%)
 Frame = +3

Query: 3   PYASLFDAYPHVKAWWTDLL 62
           PYA +FD YP VKAWW  L+
Sbjct: 188 PYAKVFDEYPKVKAWWEMLM 207



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>GSTF1_WHEAT (P30110) Glutathione S-transferase 1 (EC 2.5.1.18) (GST class-phi)|
          Length = 229

 Score = 35.0 bits (79), Expect = 0.061
 Identities = 13/20 (65%), Positives = 15/20 (75%)
 Frame = +3

Query: 3   PYASLFDAYPHVKAWWTDLL 62
           PYA +FD YP VKAWW  L+
Sbjct: 188 PYAKVFDDYPKVKAWWEMLM 207



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>GSTF4_MAIZE (P46420) Glutathione S-transferase IV (EC 2.5.1.18) (GST-IV)|
           (GST-27) (GST class-phi)
          Length = 222

 Score = 29.3 bits (64), Expect = 3.3
 Identities = 11/18 (61%), Positives = 12/18 (66%)
 Frame = +3

Query: 6   YASLFDAYPHVKAWWTDL 59
           YA+L  A PHV AWW  L
Sbjct: 181 YAALVHALPHVSAWWQGL 198



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>GSTF_HYOMU (P46423) Glutathione S-transferase (EC 2.5.1.18) (GST class-phi)|
           (25 kDa auxin-binding protein)
          Length = 212

 Score = 28.9 bits (63), Expect = 4.4
 Identities = 11/17 (64%), Positives = 13/17 (76%)
 Frame = +3

Query: 12  SLFDAYPHVKAWWTDLL 62
           SLFD+ PHV AW  D+L
Sbjct: 183 SLFDSRPHVSAWCADIL 199


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,194,444
Number of Sequences: 219361
Number of extensions: 46162
Number of successful extensions: 110
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 110
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 110
length of database: 80,573,946
effective HSP length: 0
effective length of database: 80,573,946
effective search space used: 1933774704
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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