ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags1b16
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|AJ419775.1|HVU419775 Hordeum vulgare mRNA for glutathione-S-... 109 8e-22
2gb|BT009513.1| Triticum aestivum clone wr1.pk0098.b9:fis, full i... 101 2e-19
3emb|AJ440796.1|TAE440796 Triticum aestivum mRNA for glutathione ... 101 2e-19
4gb|BT009615.1| Triticum aestivum clone wre1n.pk0107.g10:fis, ful... 94 5e-17
5gb|BT009505.1| Triticum aestivum clone wr1.pk0088.e4:fis, full i... 94 5e-17
6gb|BT009482.1| Triticum aestivum clone wr1.pk0039.e11:fis, full ... 94 5e-17
7gb|AF387085.1|AF387085 Triticum aestivum glutathione S-transfera... 94 5e-17
8gb|AF184059.1|AF184059 Triticum aestivum glutathione S-transfera... 94 5e-17
9ref|NM_191357.1| Oryza sativa (japonica cultivar-group), predic... 72 2e-10
10dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 72 2e-10
11dbj|AP003239.3| Oryza sativa (japonica cultivar-group) genomic D... 72 2e-10
12dbj|AK099142.1| Oryza sativa (japonica cultivar-group) cDNA clon... 72 2e-10
13dbj|AK059818.1| Oryza sativa (japonica cultivar-group) cDNA clon... 72 2e-10
14dbj|AK058894.1| Oryza sativa (japonica cultivar-group) cDNA clon... 72 2e-10
15gb|AF062403.1|AF062403 Oryza sativa glutathione S-transferase II... 72 2e-10
16gb|BT017983.1| Zea mays clone EL01N0525D04.c mRNA sequence 56 1e-05
17gb|BT009173.1| Triticum aestivum clone wl1n.pk0107.g3:fis, full ... 56 1e-05
18gb|BT009155.1| Triticum aestivum clone wl1n.pk0068.a8:fis, full ... 56 1e-05
19gb|BT009142.1| Triticum aestivum clone wl1n.pk0053.d10:fis, full... 56 1e-05
20emb|X06754.1|ZMGST1 Maize mRNA for GSH gluthathione S-transferas... 56 1e-05
21gb|AY103561.1| Zea mays PCO151099 mRNA sequence 56 1e-05
22gb|M24889.1|SYNMZEA Artificial maize glutathione S-transferase g... 56 1e-05
23gb|M16902.1|MZEGSTIA2 Maize glutathione S-transferase gene (GST-... 56 1e-05
24gb|DQ093362.1| Puccinellia tenuiflora glutathione S-transferase ... 54 4e-05
25gb|M16901.1|MZEGSTIB Maize glutathione S-transferase (GST-I) mRN... 50 7e-04
26gb|AY823546.1| Pennisetum glaucum glutathione S-transferase mRNA... 48 0.003
27gb|AY553635.1| Cynodon dactylon glutathione s-transferase II mRN... 46 0.010
28ref|NM_193830.1| Oryza sativa (japonica cultivar-group), predic... 40 0.64
29dbj|AP002914.2| Oryza sativa (japonica cultivar-group) genomic D... 40 0.64
30gb|AC119181.11| Mus musculus chromosome 18, clone RP24-111I16, c... 36 9.9
31emb|AJ440793.1|TAE440793 Triticum aestivum mRNA for glutathione ... 36 9.9
32emb|AJ010454.1|AMY010454 Alopecurus myosuroides mRNA for glutath... 36 9.9
33gb|AC008014.5| Homo sapiens 12 BAC RPCI11-66E20 (Roswell Park Ca... 36 9.9
34emb|BX248229.14| Zebrafish DNA sequence from clone CH211-126P4 i... 36 9.9
35gb|AF244673.1|AF244673 Zea mays glutathione S-transferase GST 8 ... 36 9.9
36gb|AY104772.1| Zea mays PCO081428 mRNA sequence 36 9.9
37dbj|AP003082.3| Homo sapiens genomic DNA, chromosome 11 clone:RP... 36 9.9 
>emb|AJ419775.1|HVU419775 Hordeum vulgare mRNA for glutathione-S-transferase I subunit (gstI
           gene)
          Length = 895

 Score =  109 bits (55), Expect = 8e-22
 Identities = 60/62 (96%)
 Strand = Plus / Plus

                                                                       
Query: 5   ctatgcatctctgtttgacgcttacccgcatgtgaaggcctggtggactgacctgctgnc 64
           ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 615 ctatgcatctctgttcgacgcttacccgcatgtgaaggcctggtggactgacctgctgac 674

             
Query: 65  ga 66
           ||
Sbjct: 675 ga 676
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>gb|BT009513.1| Triticum aestivum clone wr1.pk0098.b9:fis, full insert mRNA
           sequence
          Length = 929

 Score =  101 bits (51), Expect = 2e-19
 Identities = 62/66 (93%)
 Strand = Plus / Plus

                                                                       
Query: 1   caccctatgcatctctgtttgacgcttacccgcatgtgaaggcctggtggactgacctgc 60
           |||||||||| |||||||| ||||| ||||||||||||||||||||||||||||||||||
Sbjct: 615 caccctatgcgtctctgttcgacgcgtacccgcatgtgaaggcctggtggactgacctgc 674

                 
Query: 61  tgncga 66
           || |||
Sbjct: 675 tggcga 680
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>emb|AJ440796.1|TAE440796 Triticum aestivum mRNA for glutathione transferase F1 (gstf1 gene)
          Length = 927

 Score =  101 bits (51), Expect = 2e-19
 Identities = 62/66 (93%)
 Strand = Plus / Plus

                                                                       
Query: 1   caccctatgcatctctgtttgacgcttacccgcatgtgaaggcctggtggactgacctgc 60
           |||||||||| |||||||| ||||| ||||||||||||||||||||||||||||||||||
Sbjct: 604 caccctatgcgtctctgttcgacgcgtacccgcatgtgaaggcctggtggactgacctgc 663

                 
Query: 61  tgncga 66
           || |||
Sbjct: 664 tggcga 669
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>gb|BT009615.1| Triticum aestivum clone wre1n.pk0107.g10:fis, full insert mRNA
           sequence
          Length = 925

 Score = 93.7 bits (47), Expect = 5e-17
 Identities = 56/59 (94%)
 Strand = Plus / Plus

                                                                      
Query: 1   caccctatgcatctctgtttgacgcttacccgcatgtgaaggcctggtggactgacctg 59
           ||||||| ||||||||||| ||||| |||||||||||||||||||||||||||||||||
Sbjct: 601 caccctacgcatctctgttcgacgcgtacccgcatgtgaaggcctggtggactgacctg 659
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>gb|BT009505.1| Triticum aestivum clone wr1.pk0088.e4:fis, full insert mRNA sequence
          Length = 1583

 Score = 93.7 bits (47), Expect = 5e-17
 Identities = 61/66 (92%)
 Strand = Plus / Plus

                                                                        
Query: 1    caccctatgcatctctgtttgacgcttacccgcatgtgaaggcctggtggactgacctgc 60
            ||||||| || |||||||| ||||| ||||||||||||||||||||||||||||||||||
Sbjct: 1251 caccctacgcgtctctgttcgacgcgtacccgcatgtgaaggcctggtggactgacctgc 1310

                  
Query: 61   tgncga 66
            || |||
Sbjct: 1311 tggcga 1316
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>gb|BT009482.1| Triticum aestivum clone wr1.pk0039.e11:fis, full insert mRNA
           sequence
          Length = 967

 Score = 93.7 bits (47), Expect = 5e-17
 Identities = 56/59 (94%)
 Strand = Plus / Minus

                                                                      
Query: 1   caccctatgcatctctgtttgacgcttacccgcatgtgaaggcctggtggactgacctg 59
           ||||||| ||||||||||| ||||| |||||||||||||||||||||||||||||||||
Sbjct: 360 caccctacgcatctctgttcgacgcgtacccgcatgtgaaggcctggtggactgacctg 302
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>gb|AF387085.1|AF387085 Triticum aestivum glutathione S-transferase mRNA, complete cds
          Length = 911

 Score = 93.7 bits (47), Expect = 5e-17
 Identities = 56/59 (94%)
 Strand = Plus / Plus

                                                                      
Query: 1   caccctatgcatctctgtttgacgcttacccgcatgtgaaggcctggtggactgacctg 59
           ||||||| ||||||||||| ||||| |||||||||||||||||||||||||||||||||
Sbjct: 600 caccctacgcatctctgttcgacgcgtacccgcatgtgaaggcctggtggactgacctg 658
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>gb|AF184059.1|AF184059 Triticum aestivum glutathione S-transferase (GST1) mRNA, complete
           cds
          Length = 914

 Score = 93.7 bits (47), Expect = 5e-17
 Identities = 56/59 (94%)
 Strand = Plus / Plus

                                                                      
Query: 1   caccctatgcatctctgtttgacgcttacccgcatgtgaaggcctggtggactgacctg 59
           ||||||| ||||||||||| ||||| |||||||||||||||||||||||||||||||||
Sbjct: 594 caccctacgcatctctgttcgacgcgtacccgcatgtgaaggcctggtggactgacctg 652
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>ref|NM_191357.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 648

 Score = 71.9 bits (36), Expect = 2e-10
 Identities = 42/44 (95%)
 Strand = Plus / Plus

                                                       
Query: 16  tgtttgacgcttacccgcatgtgaaggcctggtggactgacctg 59
           |||| ||||| |||||||||||||||||||||||||||||||||
Sbjct: 551 tgttggacgcatacccgcatgtgaaggcctggtggactgacctg 594
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 71.9 bits (36), Expect = 2e-10
 Identities = 42/44 (95%)
 Strand = Plus / Minus

                                                            
Query: 16       tgtttgacgcttacccgcatgtgaaggcctggtggactgacctg 59
                |||| ||||| |||||||||||||||||||||||||||||||||
Sbjct: 32141754 tgttggacgcatacccgcatgtgaaggcctggtggactgacctg 32141711



 Score = 40.1 bits (20), Expect = 0.64
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                    
Query: 15       ctgtttgacgcttacccgcatgtgaaggcctggtgg 50
                |||||||| || ||||| ||||||||||| ||||||
Sbjct: 15199134 ctgtttgatgcgtaccctcatgtgaaggcttggtgg 15199099
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>dbj|AP003239.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0403C05
          Length = 151085

 Score = 71.9 bits (36), Expect = 2e-10
 Identities = 42/44 (95%)
 Strand = Plus / Minus

                                                         
Query: 16    tgtttgacgcttacccgcatgtgaaggcctggtggactgacctg 59
             |||| ||||| |||||||||||||||||||||||||||||||||
Sbjct: 12507 tgttggacgcatacccgcatgtgaaggcctggtggactgacctg 12464
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>dbj|AK099142.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023055F24, full
           insert sequence
          Length = 1064

 Score = 71.9 bits (36), Expect = 2e-10
 Identities = 42/44 (95%)
 Strand = Plus / Plus

                                                       
Query: 16  tgtttgacgcttacccgcatgtgaaggcctggtggactgacctg 59
           |||| ||||| |||||||||||||||||||||||||||||||||
Sbjct: 727 tgttggacgcatacccgcatgtgaaggcctggtggactgacctg 770
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>dbj|AK059818.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-205-C06, full
           insert sequence
          Length = 1070

 Score = 71.9 bits (36), Expect = 2e-10
 Identities = 42/44 (95%)
 Strand = Plus / Plus

                                                       
Query: 16  tgtttgacgcttacccgcatgtgaaggcctggtggactgacctg 59
           |||| ||||| |||||||||||||||||||||||||||||||||
Sbjct: 733 tgttggacgcatacccgcatgtgaaggcctggtggactgacctg 776
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>dbj|AK058894.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-007-E12, full
           insert sequence
          Length = 963

 Score = 71.9 bits (36), Expect = 2e-10
 Identities = 42/44 (95%)
 Strand = Plus / Plus

                                                       
Query: 16  tgtttgacgcttacccgcatgtgaaggcctggtggactgacctg 59
           |||| ||||| |||||||||||||||||||||||||||||||||
Sbjct: 626 tgttggacgcatacccgcatgtgaaggcctggtggactgacctg 669
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>gb|AF062403.1|AF062403 Oryza sativa glutathione S-transferase II mRNA, complete cds
          Length = 1057

 Score = 71.9 bits (36), Expect = 2e-10
 Identities = 42/44 (95%)
 Strand = Plus / Plus

                                                       
Query: 16  tgtttgacgcttacccgcatgtgaaggcctggtggactgacctg 59
           |||| ||||| |||||||||||||||||||||||||||||||||
Sbjct: 650 tgttggacgcatacccgcatgtgaaggcctggtggactgacctg 693
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>gb|BT017983.1| Zea mays clone EL01N0525D04.c mRNA sequence
          Length = 978

 Score = 56.0 bits (28), Expect = 1e-05
 Identities = 43/48 (89%)
 Strand = Plus / Plus

                                                           
Query: 3   ccctatgcatctctgtttgacgcttacccgcatgtgaaggcctggtgg 50
           ||||| |||||| || | ||||| ||||||||||||||||||||||||
Sbjct: 628 ccctacgcatctgtgctcgacgcctacccgcatgtgaaggcctggtgg 675
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>gb|BT009173.1| Triticum aestivum clone wl1n.pk0107.g3:fis, full insert mRNA
           sequence
          Length = 588

 Score = 56.0 bits (28), Expect = 1e-05
 Identities = 43/48 (89%)
 Strand = Plus / Plus

                                                           
Query: 3   ccctatgcatctctgtttgacgcttacccgcatgtgaaggcctggtgg 50
           ||||| |||||| || | ||||| ||||||||||||||||||||||||
Sbjct: 264 ccctacgcatctgtgctcgacgcctacccgcatgtgaaggcctggtgg 311
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>gb|BT009155.1| Triticum aestivum clone wl1n.pk0068.a8:fis, full insert mRNA
           sequence
          Length = 942

 Score = 56.0 bits (28), Expect = 1e-05
 Identities = 43/48 (89%)
 Strand = Plus / Plus

                                                           
Query: 3   ccctatgcatctctgtttgacgcttacccgcatgtgaaggcctggtgg 50
           ||||| |||||| || | ||||| ||||||||||||||||||||||||
Sbjct: 628 ccctacgcatctgtgctcgacgcctacccgcatgtgaaggcctggtgg 675
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>gb|BT009142.1| Triticum aestivum clone wl1n.pk0053.d10:fis, full insert mRNA
           sequence
          Length = 943

 Score = 56.0 bits (28), Expect = 1e-05
 Identities = 43/48 (89%)
 Strand = Plus / Plus

                                                           
Query: 3   ccctatgcatctctgtttgacgcttacccgcatgtgaaggcctggtgg 50
           ||||| |||||| || | ||||| ||||||||||||||||||||||||
Sbjct: 622 ccctacgcatctgtgctcgacgcctacccgcatgtgaaggcctggtgg 669
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>emb|X06754.1|ZMGST1 Maize mRNA for GSH gluthathione S-transferase I (GST;EC 2.5.1.18)
          Length = 929

 Score = 56.0 bits (28), Expect = 1e-05
 Identities = 43/48 (89%)
 Strand = Plus / Plus

                                                           
Query: 3   ccctatgcatctctgtttgacgcttacccgcatgtgaaggcctggtgg 50
           ||||| |||||| || | ||||| ||||||||||||||||||||||||
Sbjct: 616 ccctacgcatctgtgctcgacgcctacccgcatgtgaaggcctggtgg 663
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>gb|AY103561.1| Zea mays PCO151099 mRNA sequence
          Length = 971

 Score = 56.0 bits (28), Expect = 1e-05
 Identities = 43/48 (89%)
 Strand = Plus / Plus

                                                           
Query: 3   ccctatgcatctctgtttgacgcttacccgcatgtgaaggcctggtgg 50
           ||||| |||||| || | ||||| ||||||||||||||||||||||||
Sbjct: 626 ccctacgcatctgtgctcgacgcctacccgcatgtgaaggcctggtgg 673
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>gb|M24889.1|SYNMZEA Artificial maize glutathione S-transferase gene, complete cds
          Length = 660

 Score = 56.0 bits (28), Expect = 1e-05
 Identities = 43/48 (89%)
 Strand = Plus / Plus

                                                           
Query: 3   ccctatgcatctctgtttgacgcttacccgcatgtgaaggcctggtgg 50
           ||||| |||||| || | ||||| ||||||||||||||||||||||||
Sbjct: 546 ccctacgcatctgtgctcgacgcctacccgcatgtgaaggcctggtgg 593
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>gb|M16902.1|MZEGSTIA2 Maize glutathione S-transferase gene (GST-I), exons 2 and 3
          Length = 1671

 Score = 56.0 bits (28), Expect = 1e-05
 Identities = 43/48 (89%)
 Strand = Plus / Plus

                                                            
Query: 3    ccctatgcatctctgtttgacgcttacccgcatgtgaaggcctggtgg 50
            ||||| |||||| || | ||||| ||||||||||||||||||||||||
Sbjct: 1291 ccctacgcatctgtgctcgacgcctacccgcatgtgaaggcctggtgg 1338
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>gb|DQ093362.1| Puccinellia tenuiflora glutathione S-transferase mRNA, partial cds
          Length = 201

 Score = 54.0 bits (27), Expect = 4e-05
 Identities = 45/51 (88%)
 Strand = Plus / Plus

                                                              
Query: 9   gcatctctgtttgacgcttacccgcatgtgaaggcctggtggactgacctg 59
           |||||| |||| ||||| || || |||||||| ||||||||||||||||||
Sbjct: 100 gcatctttgttcgacgcatatccacatgtgaaagcctggtggactgacctg 150
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>gb|M16901.1|MZEGSTIB Maize glutathione S-transferase (GST-I) mRNA, complete cds
          Length = 727

 Score = 50.1 bits (25), Expect = 7e-04
 Identities = 42/48 (87%)
 Strand = Plus / Plus

                                                           
Query: 3   ccctatgcatctctgtttgacgcttacccgcatgtgaaggcctggtgg 50
           ||||| |||||| || | ||||| ||||||||||||||||| ||||||
Sbjct: 553 ccctacgcatctgtgctcgacgcctacccgcatgtgaaggcntggtgg 600
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>gb|AY823546.1| Pennisetum glaucum glutathione S-transferase mRNA, complete cds
          Length = 1006

 Score = 48.1 bits (24), Expect = 0.003
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 27  tacccgcatgtgaaggcctggtgg 50
           ||||||||||||||||||||||||
Sbjct: 656 tacccgcatgtgaaggcctggtgg 679
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>gb|AY553635.1| Cynodon dactylon glutathione s-transferase II mRNA, complete cds
          Length = 1004

 Score = 46.1 bits (23), Expect = 0.010
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                      
Query: 33  catgtgaaggcctggtggactgacctg 59
           |||||||||||||||||||||| ||||
Sbjct: 636 catgtgaaggcctggtggactggcctg 662
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>ref|NM_193830.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 657

 Score = 40.1 bits (20), Expect = 0.64
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                               
Query: 15  ctgtttgacgcttacccgcatgtgaaggcctggtgg 50
           |||||||| || ||||| ||||||||||| ||||||
Sbjct: 559 ctgtttgatgcgtaccctcatgtgaaggcttggtgg 594
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>dbj|AP002914.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0493G01
          Length = 167587

 Score = 40.1 bits (20), Expect = 0.64
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                 
Query: 15    ctgtttgacgcttacccgcatgtgaaggcctggtgg 50
             |||||||| || ||||| ||||||||||| ||||||
Sbjct: 52507 ctgtttgatgcgtaccctcatgtgaaggcttggtgg 52472
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>gb|AC119181.11| Mus musculus chromosome 18, clone RP24-111I16, complete sequence
          Length = 195506

 Score = 36.2 bits (18), Expect = 9.9
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                
Query: 44     ctggtggactgacctgct 61
              ||||||||||||||||||
Sbjct: 168629 ctggtggactgacctgct 168646
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>emb|AJ440793.1|TAE440793 Triticum aestivum mRNA for glutathione transferase F4 (gstf4 gene)
          Length = 721

 Score = 36.2 bits (18), Expect = 9.9
 Identities = 21/22 (95%)
 Strand = Plus / Plus

                                 
Query: 30  ccgcatgtgaaggcctggtgga 51
           |||||||||||||| |||||||
Sbjct: 582 ccgcatgtgaaggcatggtgga 603
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>emb|AJ010454.1|AMY010454 Alopecurus myosuroides mRNA for glutathione transferase 2d
          Length = 851

 Score = 36.2 bits (18), Expect = 9.9
 Identities = 24/26 (92%)
 Strand = Plus / Plus

                                     
Query: 25  cttacccgcatgtgaaggcctggtgg 50
           |||||||||| || ||||||||||||
Sbjct: 616 cttacccgcacgtcaaggcctggtgg 641
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>gb|AC008014.5| Homo sapiens 12 BAC RPCI11-66E20 (Roswell Park Cancer Institute Human
            BAC Library) complete sequence
          Length = 167939

 Score = 36.2 bits (18), Expect = 9.9
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                              
Query: 37   tgaaggcctggtggactg 54
            ||||||||||||||||||
Sbjct: 8167 tgaaggcctggtggactg 8150
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>emb|BX248229.14| Zebrafish DNA sequence from clone CH211-126P4 in linkage group 2,
            complete sequence
          Length = 180233

 Score = 36.2 bits (18), Expect = 9.9
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                              
Query: 43   cctggtggactgacctgc 60
            ||||||||||||||||||
Sbjct: 9370 cctggtggactgacctgc 9353
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>gb|AF244673.1|AF244673 Zea mays glutathione S-transferase GST 8 mRNA, complete cds
          Length = 844

 Score = 36.2 bits (18), Expect = 9.9
 Identities = 27/30 (90%)
 Strand = Plus / Plus

                                         
Query: 21  gacgcttacccgcatgtgaaggcctggtgg 50
           ||||| |||||||| || ||||||||||||
Sbjct: 570 gacgcgtacccgcacgtcaaggcctggtgg 599
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>gb|AY104772.1| Zea mays PCO081428 mRNA sequence
          Length = 1021

 Score = 36.2 bits (18), Expect = 9.9
 Identities = 27/30 (90%)
 Strand = Plus / Plus

                                         
Query: 21  gacgcttacccgcatgtgaaggcctggtgg 50
           ||||| |||||||| || ||||||||||||
Sbjct: 722 gacgcgtacccgcacgtcaaggcctggtgg 751
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>dbj|AP003082.3| Homo sapiens genomic DNA, chromosome 11 clone:RP11-746C14, complete
              sequence
          Length = 189635

 Score = 36.2 bits (18), Expect = 9.9
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                
Query: 32     gcatgtgaaggcctggtg 49
              ||||||||||||||||||
Sbjct: 151298 gcatgtgaaggcctggtg 151281


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 331,679
Number of Sequences: 3902068
Number of extensions: 331679
Number of successful extensions: 19105
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 19050
Number of HSP's gapped (non-prelim): 55
length of query: 66
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 45
effective length of database: 17,151,101,840
effective search space: 771799582800
effective search space used: 771799582800
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 18 (36.2 bits)
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