| Clone Name | bags1b05 |
|---|---|
| Clone Library Name | barley_pub |
>RETM_DROME (Q9VMD6) Protein real-time| Length = 659 Score = 48.9 bits (115), Expect = 3e-06 Identities = 28/73 (38%), Positives = 39/73 (53%) Frame = +2 Query: 53 TXLRFLKAXKWNVPKAYKMLMDCLNWRLQNEIDSVLXKPILPADLYXSIRDTLLVGLTGY 232 T LRFL A W+V +AY ML D L WR ++ ID++L + PA + + G Sbjct: 246 TILRFLAARDWHVSQAYAMLCDSLRWRREHRIDALLAEYSKPA----VVVEHFPGGWHHL 301 Query: 233 SKQGQPVYAFGVG 271 K G+PVY +G Sbjct: 302 DKDGRPVYILRLG 314
>S14L1_HUMAN (Q92503) SEC14-like protein 1| Length = 715 Score = 42.4 bits (98), Expect = 3e-04 Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 2/85 (2%) Frame = +2 Query: 23 QNXHQG-YPRGTX-LRFLKAXKWNVPKAYKMLMDCLNWRLQNEIDSVLXKPILPADLYXS 196 Q H+G P+ LRFL+A +N+ KA +++ L WR Q+++D +L P L Sbjct: 267 QETHKGKIPKDEHILRFLRARDFNIDKAREIMCQSLTWRKQHQVDYILETWTPPQVL--- 323 Query: 197 IRDTLLVGLTGYSKQGQPVYAFGVG 271 +D G + K G+P+Y +G Sbjct: 324 -QDYYAGGWHHHDKDGRPLYVLRLG 347
>PATL4_ARATH (Q94C59) Patellin-4| Length = 540 Score = 38.9 bits (89), Expect = 0.003 Identities = 17/34 (50%), Positives = 25/34 (73%) Frame = +2 Query: 59 LRFLKAXKWNVPKAYKMLMDCLNWRLQNEIDSVL 160 L+FL+A + V +A++ML L WR QN+IDS+L Sbjct: 224 LKFLRARDFKVNEAFEMLKKTLKWRKQNKIDSIL 257
>YAS2_SCHPO (Q10138) Hypothetical protein C3H8.02 in chromosome I| Length = 444 Score = 38.1 bits (87), Expect = 0.005 Identities = 16/30 (53%), Positives = 20/30 (66%) Frame = +2 Query: 44 PRGTXLRFLKAXKWNVPKAYKMLMDCLNWR 133 P G LRFL+A KWNV A +M M ++WR Sbjct: 123 PDGLLLRFLRARKWNVEAALEMFMKTVHWR 152
>CSR1_ASHGO (Q757H2) Phosphatidylinositol transfer protein CSR1| Length = 436 Score = 36.2 bits (82), Expect = 0.019 Identities = 15/32 (46%), Positives = 20/32 (62%) Frame = +2 Query: 41 YPRGTXLRFLKAXKWNVPKAYKMLMDCLNWRL 136 YP LRF++A KW++ KA M+ L WRL Sbjct: 136 YPDNLLLRFVRARKWDINKAMIMMAHSLRWRL 167
>PATL6_ARATH (Q9SCU1) Patellin-6| Length = 409 Score = 35.8 bits (81), Expect = 0.025 Identities = 22/72 (30%), Positives = 37/72 (51%), Gaps = 2/72 (2%) Frame = +2 Query: 59 LRFLKAXKWNVPKAYKMLMDCLNWRLQNEIDSVLXKPILPADLYXSIRDTLLVGLTGYSK 238 L+FL+A + V + +ML CL WR + + + + + + DL + + GY K Sbjct: 86 LKFLRARDFKVADSLRMLEKCLEWREEFKAEKLTEEDLGFKDLEGKV-----AYMRGYDK 140 Query: 239 QGQPV--YAFGV 268 +G PV A+GV Sbjct: 141 EGHPVCYNAYGV 152
>SEC14_ASHGO (Q75DK1) SEC14 cytosolic factor| (Phosphatidylinositol/phosphatidylcholine transfer protein) (PI/PC TP) Length = 311 Score = 35.8 bits (81), Expect = 0.025 Identities = 15/35 (42%), Positives = 23/35 (65%) Frame = +2 Query: 53 TXLRFLKAXKWNVPKAYKMLMDCLNWRLQNEIDSV 157 T LRFL+A K++V A M +C WR +N +D++ Sbjct: 58 TLLRFLRARKFDVAAARAMFENCEKWRKENGVDTI 92
>PATL2_ARATH (Q56ZI2) Patellin-2| Length = 683 Score = 35.4 bits (80), Expect = 0.033 Identities = 20/65 (30%), Positives = 35/65 (53%) Frame = +2 Query: 59 LRFLKAXKWNVPKAYKMLMDCLNWRLQNEIDSVLXKPILPADLYXSIRDTLLVGLTGYSK 238 L+FL+A + V +A+ ML + + WR +N+ID ++ + + ++ LV G K Sbjct: 369 LKFLRARDFKVKEAFTMLKNTVQWRKENKIDDLVSEDLEGSEF------EKLVFTHGVDK 422 Query: 239 QGQPV 253 QG V Sbjct: 423 QGHVV 427
>YJX4_SCHPO (Q9UU99) Protein C23B6.04c in chromosome III| Length = 1008 Score = 35.4 bits (80), Expect = 0.033 Identities = 22/68 (32%), Positives = 32/68 (47%) Frame = +2 Query: 47 RGTXLRFLKAXKWNVPKAYKMLMDCLNWRLQNEIDSVLXKPILPADLYXSIRDTLLVGLT 226 R LR+L+A KW+V A K ++D L WR +++ + D T L Sbjct: 635 RECILRYLRATKWHVSNAKKRIVDTLVWRRHFGVNN------MDPDEIQEENATGKQVLL 688 Query: 227 GYSKQGQP 250 GY K G+P Sbjct: 689 GYDKDGRP 696
>SEC14_YARLI (P45816) SEC14 cytosolic factor| (Phosphatidylinositol/phosphatidylcholine transfer protein) (PI/PC TP) Length = 492 Score = 35.4 bits (80), Expect = 0.033 Identities = 24/77 (31%), Positives = 37/77 (48%), Gaps = 4/77 (5%) Frame = +2 Query: 53 TXLRFLKAXKWNVPKAYKMLMDCLNWRLQNEIDSVLXKPILPADLYXSIRDTLLVGLTGY 232 T LRFL+A K++VP A +M +C WR + +++L D + + + Y Sbjct: 56 TLLRFLRARKFDVPLAQEMWENCEKWRKEFGTNTIL------EDFWYKEKKEVAKLYPQY 109 Query: 233 ----SKQGQPVYAFGVG 271 K G+PVY VG Sbjct: 110 YHKTDKDGRPVYVENVG 126
>CRAL_HUMAN (P12271) Cellular retinaldehyde-binding protein (CRALBP)| Length = 316 Score = 34.7 bits (78), Expect = 0.056 Identities = 18/46 (39%), Positives = 26/46 (56%) Frame = +2 Query: 2 EPLXTTFQNXHQGYPRGTXLRFLKAXKWNVPKAYKMLMDCLNWRLQ 139 E L Q G LRF++A K+NV +AY++L +N+RLQ Sbjct: 77 EELAVAVAERVQEKDSGFFLRFIRARKFNVGRAYELLRGYVNFRLQ 122
>S14L4_HUMAN (Q9UDX3) SEC14-like protein 4 (Tocopherol-associated protein 3)| Length = 406 Score = 34.3 bits (77), Expect = 0.073 Identities = 22/67 (32%), Positives = 37/67 (55%), Gaps = 1/67 (1%) Frame = +2 Query: 59 LRFLKAXKWNVPKAYKMLMDCLNWRLQNEIDSVLX-KPILPADLYXSIRDTLLVGLTGYS 235 LR+L+A +++ K+ ML + +R Q ++D+++ +P LY S GL GY Sbjct: 39 LRWLRARNFDLQKSEDMLRRHMEFRKQQDLDNIVTWQPPEVIQLYDS------GGLCGYD 92 Query: 236 KQGQPVY 256 +G PVY Sbjct: 93 YEGCPVY 99
>SEC14_SCHPO (Q10137) Sec14 cytosolic factor| (Phosphatidylinositol/phosphatidyl-choline transfer protein) (PI/PC TP) (Sporulation-specific protein 20) Length = 286 Score = 33.9 bits (76), Expect = 0.095 Identities = 13/36 (36%), Positives = 24/36 (66%) Frame = +2 Query: 53 TXLRFLKAXKWNVPKAYKMLMDCLNWRLQNEIDSVL 160 T LRFL+A K+N+ ++ +M + C WR + +D ++ Sbjct: 52 TLLRFLRARKFNLQQSLEMFIKCEKWRKEFGVDDLI 87
>SEC14_CANAL (P46250) SEC14 cytosolic factor| (Phosphatidylinositol/phosphatidylcholine transfer protein) (PI/PC TP) Length = 301 Score = 33.1 bits (74), Expect = 0.16 Identities = 23/72 (31%), Positives = 36/72 (50%), Gaps = 6/72 (8%) Frame = +2 Query: 59 LRFLKAXKWNVPKAYKMLMDCLNWRLQNEIDSVL------XKPILPADLYXSIRDTLLVG 220 LRFL+A K+++ KA M + C WR ++++L KPI+ A +Y + Sbjct: 59 LRFLRARKFDIQKAIDMFVACEKWREDFGVNTILKDFHYEEKPIV-AKMYPTYYHKT--- 114 Query: 221 LTGYSKQGQPVY 256 K G+PVY Sbjct: 115 ----DKDGRPVY 122
>PATL3_ARATH (Q56Z59) Patellin-3| Length = 490 Score = 33.1 bits (74), Expect = 0.16 Identities = 18/65 (27%), Positives = 38/65 (58%) Frame = +2 Query: 59 LRFLKAXKWNVPKAYKMLMDCLNWRLQNEIDSVLXKPILPADLYXSIRDTLLVGLTGYSK 238 L+FL+A ++ V ++ ML + + WR + +ID ++ + ++ DL +V + G+ + Sbjct: 168 LKFLRAREFKVKDSFAMLKNTIKWRKEFKIDELVEEDLVD-DL------DKVVFMHGHDR 220 Query: 239 QGQPV 253 +G PV Sbjct: 221 EGHPV 225
>CRAL_BOVIN (P10123) Cellular retinaldehyde-binding protein (CRALBP)| Length = 316 Score = 32.7 bits (73), Expect = 0.21 Identities = 15/35 (42%), Positives = 24/35 (68%) Frame = +2 Query: 35 QGYPRGTXLRFLKAXKWNVPKAYKMLMDCLNWRLQ 139 QG LRF++A K++V +AY++L +N+RLQ Sbjct: 88 QGKDSAFFLRFIRARKFHVGRAYELLRGYVNFRLQ 122
>CSR1_YEAST (Q06705) Phosphatidylinositol transfer protein CSR1 (CHS5 SPA2| rescue protein 1) (SEC14 homolog protein 2) Length = 408 Score = 32.3 bits (72), Expect = 0.28 Identities = 14/30 (46%), Positives = 17/30 (56%) Frame = +2 Query: 44 PRGTXLRFLKAXKWNVPKAYKMLMDCLNWR 133 P T L+F++A KWN K ML L WR Sbjct: 108 PDATILKFIRARKWNADKTIAMLGHDLYWR 137
>SEC14_YEAST (P24280) SEC14 cytosolic factor| (Phosphatidylinositol/phosphatidylcholine transfer protein) (PI/PC TP) Length = 303 Score = 32.3 bits (72), Expect = 0.28 Identities = 15/36 (41%), Positives = 22/36 (61%) Frame = +2 Query: 53 TXLRFLKAXKWNVPKAYKMLMDCLNWRLQNEIDSVL 160 T LRFL+A K++V A +M +C WR D++L Sbjct: 56 TLLRFLRARKFDVQLAKEMFENCEKWRKDYGTDTIL 91
>YN02_CAEEL (Q03606) Hypothetical protein T23G5.2 in chromosome III| Length = 743 Score = 31.6 bits (70), Expect = 0.47 Identities = 14/34 (41%), Positives = 22/34 (64%) Frame = +2 Query: 59 LRFLKAXKWNVPKAYKMLMDCLNWRLQNEIDSVL 160 LRFL+A ++V KA M+ + WR Q+ +D +L Sbjct: 305 LRFLRARDFDVAKAKDMVHASIIWRKQHNVDKIL 338
>PDR17_YEAST (P53844) Phosphatidylinositol transfer protein PDR17 (PITP)| (Phosphatidylserine transport B pathway protein 2) (Pleiotropic drug resistance protein 17) (SEC14 homolog 3) Length = 350 Score = 31.2 bits (69), Expect = 0.62 Identities = 22/71 (30%), Positives = 31/71 (43%), Gaps = 1/71 (1%) Frame = +2 Query: 47 RGTXLRFLKAXKWNVPKAYKMLMDCLNWRLQNEI-DSVLXKPILPADLYXSIRDTLLVGL 223 R LR+L+A KWN A K L L WR + + K L AD +T + Sbjct: 92 RECFLRYLRANKWNTANAIKGLTKTLVWRREIGLTHGKEDKDPLTADKVAVENETGKQVI 151 Query: 224 TGYSKQGQPVY 256 G+ +P+Y Sbjct: 152 LGFDNAKRPLY 162
>YGR1_SCHPO (Q9UUC2) Hypothetical protein C365.01 in chromosome II| Length = 355 Score = 31.2 bits (69), Expect = 0.62 Identities = 15/38 (39%), Positives = 23/38 (60%) Frame = +2 Query: 53 TXLRFLKAXKWNVPKAYKMLMDCLNWRLQNEIDSVLXK 166 T LRFLKA K+ V + ML + + WR Q + S++ + Sbjct: 54 TLLRFLKARKFVVTDSSDMLANAIVWRQQANLRSIMVR 91
>CRAL_MOUSE (Q9Z275) Cellular retinaldehyde-binding protein (CRALBP)| Length = 316 Score = 31.2 bits (69), Expect = 0.62 Identities = 13/27 (48%), Positives = 22/27 (81%) Frame = +2 Query: 59 LRFLKAXKWNVPKAYKMLMDCLNWRLQ 139 LRF++A K++V +AY++L +N+RLQ Sbjct: 96 LRFIRARKFDVGRAYELLKGYVNFRLQ 122
>PATL5_ARATH (Q9M0R2) Patellin-5| Length = 668 Score = 30.8 bits (68), Expect = 0.81 Identities = 20/67 (29%), Positives = 33/67 (49%), Gaps = 2/67 (2%) Frame = +2 Query: 59 LRFLKAXKWNVPKAYKMLMDCLNWRLQNEIDSVLXKPILPADLYXSIRDTL--LVGLTGY 232 L+FL+A + +AY ML L WR+ I+ +L + ++ D L +V + G Sbjct: 343 LKFLRARDFKPQEAYSMLNKTLQWRIDFNIEELLDE---------NLGDDLDKVVFMQGQ 393 Query: 233 SKQGQPV 253 K+ PV Sbjct: 394 DKENHPV 400
>SEC14_CANGA (P53989) SEC14 cytosolic factor| (Phosphatidylinositol/phosphatidylcholine transfer protein) (PI/PC TP) Length = 302 Score = 30.4 bits (67), Expect = 1.1 Identities = 13/36 (36%), Positives = 23/36 (63%) Frame = +2 Query: 53 TXLRFLKAXKWNVPKAYKMLMDCLNWRLQNEIDSVL 160 T LRFL+A K++V A +M +C WR + ++++ Sbjct: 55 TLLRFLRARKFDVALAKEMFENCEKWRKEYGTNTIM 90
>PATL1_ARATH (Q56WK6) Patellin-1| Length = 573 Score = 30.4 bits (67), Expect = 1.1 Identities = 12/33 (36%), Positives = 22/33 (66%) Frame = +2 Query: 62 RFLKAXKWNVPKAYKMLMDCLNWRLQNEIDSVL 160 +FL+A + V +A ML + + WR +N+ID ++ Sbjct: 261 KFLRARDFKVKEALTMLKNTVQWRKENKIDELV 293
>YUQP_CAEEL (Q19895) Hypothetical protein F28H7.8 in chromosome V| Length = 410 Score = 28.9 bits (63), Expect = 3.1 Identities = 12/39 (30%), Positives = 22/39 (56%) Frame = +2 Query: 59 LRFLKAXKWNVPKAYKMLMDCLNWRLQNEIDSVLXKPIL 175 LR+L++ +N+PK +L L WR ++D + +L Sbjct: 41 LRWLQSNDFNIPKTVHLLKKHLKWRKDRKLDEPESQSLL 79
>SEC14_KLULA (P24859) SEC14 cytosolic factor| (Phosphatidylinositol/phosphatidylcholine transfer protein) (PI/PC TP) Length = 301 Score = 28.9 bits (63), Expect = 3.1 Identities = 12/35 (34%), Positives = 22/35 (62%) Frame = +2 Query: 53 TXLRFLKAXKWNVPKAYKMLMDCLNWRLQNEIDSV 157 T LRFL+A K+++ + M +C WR + +D++ Sbjct: 55 TLLRFLRARKFDLEASKIMYENCEKWRKEFGVDTI 89
>CAC1I_HUMAN (Q9P0X4) Voltage-dependent T-type calcium channel alpha-1I subunit| (Voltage-gated calcium channel alpha subunit Cav3.3) (Ca(v)3.3) Length = 2223 Score = 28.5 bits (62), Expect = 4.0 Identities = 11/24 (45%), Positives = 16/24 (66%) Frame = -1 Query: 146 SHFEASNSSNPLAFYKPWGRSIXW 75 S+ + S SS+ ++Y PWGRS W Sbjct: 961 SYDQRSLSSSRSSYYGPWGRSAAW 984
>ATG15_CANAL (Q5A4N0) Putative lipase ATG15 (EC 3.1.1.3) (Autophagy-related| protein 15) Length = 597 Score = 27.7 bits (60), Expect = 6.8 Identities = 13/32 (40%), Positives = 16/32 (50%) Frame = +2 Query: 116 DCLNWRLQNEIDSVLXKPILPADLYXSIRDTL 211 DC NWR D+ +P LP L S + TL Sbjct: 494 DCFNWRFVAHDDNEKDEPKLPNPLRSSSKSTL 525
>PYRG_SCHPO (O42644) CTP synthase (EC 6.3.4.2) (UTP--ammonia ligase) (CTP| synthetase) Length = 600 Score = 27.7 bits (60), Expect = 6.8 Identities = 14/27 (51%), Positives = 19/27 (70%), Gaps = 1/27 (3%) Frame = -1 Query: 170 LVWXERCQSHFEAS-NSSNPLAFYKPW 93 L W E SH EAS N+S+PL+++K W Sbjct: 338 LQWVEA--SHLEASTNTSDPLSYHKAW 362
>CAC1I_RAT (Q9Z0Y8) Voltage-dependent T-type calcium channel alpha-1I subunit| (Voltage-gated calcium channel alpha subunit Cav3.3) (CaVT.3) Length = 2201 Score = 27.3 bits (59), Expect = 8.9 Identities = 11/24 (45%), Positives = 16/24 (66%) Frame = -1 Query: 146 SHFEASNSSNPLAFYKPWGRSIXW 75 S+ + S SS+ ++Y PWGRS W Sbjct: 919 SYDQRSLSSSRSSYYGPWGRSGTW 942
>BGAL_PYRWO (O52629) Beta-galactosidase (EC 3.2.1.23) (Lactase)| Length = 510 Score = 27.3 bits (59), Expect = 8.9 Identities = 17/55 (30%), Positives = 24/55 (43%) Frame = +2 Query: 170 ILPADLYXSIRDTLLVGLTGYSKQGQPVYAFGVGLSXFDRASXNYYLQSHIQMNE 334 + P +Y SI + K G PVY G++ YY+ SHI+M E Sbjct: 391 LYPEGMYDSIVEA--------HKYGVPVYVTENGIADSKDILRPYYIASHIKMTE 437
>CPT1A_HORSE (Q68Y62) Carnitine O-palmitoyltransferase I, liver isoform (EC| 2.3.1.21) (CPT I) (CPTI-L) (Carnitine palmitoyltransferase 1A) Length = 776 Score = 27.3 bits (59), Expect = 8.9 Identities = 19/74 (25%), Positives = 31/74 (41%) Frame = +2 Query: 122 LNWRLQNEIDSVLXKPILPADLYXSIRDTLLVGLTGYSKQGQPVYAFGVGLSXFDRASXN 301 L W + E V+ + A++ S D P +AFG GL R S + Sbjct: 518 LQWDIPEECQDVIETSLNTANILASDVDF----------HSFPFHAFGKGLIKKCRTSPD 567 Query: 302 YYLQSHIQMNEYRD 343 ++Q +Q+ Y+D Sbjct: 568 AFVQLALQLAHYKD 581
>ADH3_HAEIN (P44557) Putative alcohol dehydrogenase class 3 (EC 1.1.1.1)| (Alcohol dehydrogenase class III) (S-(hydroxymethyl)glutathione dehydrogenase) (EC 1.1.1.284) (Glutathione-dependent formaldehyde dehydrogenase) (FDH) (FALDH) Length = 378 Score = 27.3 bits (59), Expect = 8.9 Identities = 18/43 (41%), Positives = 24/43 (55%), Gaps = 5/43 (11%) Frame = +2 Query: 182 DLYXSIRDTLLVGL-----TGYSKQGQPVYAFGVGLSXFDRAS 295 +L S+RDT GL T +S QGQP+Y + +G S F S Sbjct: 113 NLCVSVRDTQGKGLMPDCTTRFSYQGQPIYHY-MGCSTFSEYS 154 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 50,079,784 Number of Sequences: 219361 Number of extensions: 856345 Number of successful extensions: 1867 Number of sequences better than 10.0: 34 Number of HSP's better than 10.0 without gapping: 1846 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1866 length of database: 80,573,946 effective HSP length: 109 effective length of database: 56,663,597 effective search space used: 1359926328 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)