ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bah41b23 |
|---|---|
| Clone Library Name | barley_pub |
>MTNK_BACSU (O31663) Methylthioribose kinase (EC 2.7.1.100) (MTR kinase)| Length = 397 Score = 151 bits (382), Expect = 1e-36 Identities = 84/203 (41%), Positives = 125/203 (61%), Gaps = 4/203 (1%) Frame = +3 Query: 9 EASALREHGRLCPDHVPEVYHFDRAMSLIGMRYIKPPHI-ILRKGLIAGVHYPLLAHHMA 185 E+SAL G P VP V++ D M++ M + H+ I RKGLI G +YP L+ H+ Sbjct: 84 ESSALIRQGEHVPHLVPRVFYSDTEMAVTVMEDLS--HLKIARKGLIEGENYPHLSQHIG 141 Query: 186 DYMANTLFFTSLLYNSTTHHKKQVARYCENVEMCRLTEQVVFSDPYMVSKYNRWNS---P 356 +++ TLF++S Y KKQ+ + N E+C +TE++VF+DP+ N + P Sbjct: 142 EFLGKTLFYSSD-YALEPKVKKQLVKQFTNPELCDITERLVFTDPFFDHDTNDFEEELRP 200 Query: 357 FLDKDAEAVREDDGLKLEIAELKSMFIERAQALIHGDLHTGSIMVTPDSTQVIDPEFAFY 536 F++K + +D +K+E A+LK F+ A+ LIHGDLHTGSI + T+VIDPEFAFY Sbjct: 201 FVEK----LWNNDSVKIEAAKLKKSFLTSAETLIHGDLHTGSIFASEHETKVIDPEFAFY 256 Query: 537 APMGYDIGAFLGNLILAYFAQDG 605 P+G+D+G F+ NL L ++DG Sbjct: 257 GPIGFDVGQFIANLFLNALSRDG 279
>MTNK_BACAN (Q81MJ5) Methylthioribose kinase (EC 2.7.1.100) (MTR kinase)| Length = 393 Score = 143 bits (361), Expect = 4e-34 Identities = 78/192 (40%), Positives = 117/192 (60%) Frame = +3 Query: 9 EASALREHGRLCPDHVPEVYHFDRAMSLIGMRYIKPPHIILRKGLIAGVHYPLLAHHMAD 188 E+ AL+ + P++VP VY D +++ + + I RKGLI G YPLL+ H+ Sbjct: 76 ESKALQIFAKYVPEYVPVVYSHDEELAVTVIEDLSRL-TITRKGLIDGEEYPLLSQHIGR 134 Query: 189 YMANTLFFTSLLYNSTTHHKKQVARYCENVEMCRLTEQVVFSDPYMVSKYNRWNSPFLDK 368 ++AN LF+TS + + K+ + N ++C++TE +VF+DP+ N + P L Sbjct: 135 FLANVLFYTSD-FGLQSEEKRVLEGTFVNPDLCKITEDLVFTDPFGHYDTNDYE-PELQL 192 Query: 369 DAEAVREDDGLKLEIAELKSMFIERAQALIHGDLHTGSIMVTPDSTQVIDPEFAFYAPMG 548 + + D LKL++A+ K F+ R +ALIHGDLHTGSI +P T+VIDPEFA Y P G Sbjct: 193 TIDELWSDKTLKLKVAQYKYKFLTRKEALIHGDLHTGSIFSSPSETKVIDPEFATYGPFG 252 Query: 549 YDIGAFLGNLIL 584 +DIG F+ NL+L Sbjct: 253 FDIGQFIANLLL 264
>MTNK_BACCR (Q819F1) Methylthioribose kinase (EC 2.7.1.100) (MTR kinase)| Length = 393 Score = 140 bits (354), Expect = 2e-33 Identities = 77/192 (40%), Positives = 116/192 (60%) Frame = +3 Query: 9 EASALREHGRLCPDHVPEVYHFDRAMSLIGMRYIKPPHIILRKGLIAGVHYPLLAHHMAD 188 E+ AL+ + PD+VP VY D +++ + + I RKGLI G YPLL+ H+ Sbjct: 76 ESKALQIFAQYVPDYVPVVYSHDEELAITVIEDLSRL-TITRKGLIDGEEYPLLSQHIGR 134 Query: 189 YMANTLFFTSLLYNSTTHHKKQVARYCENVEMCRLTEQVVFSDPYMVSKYNRWNSPFLDK 368 ++A+ LF+TS + + K+ + N ++C++TE +VF+DP+ N + P L Sbjct: 135 FLAHVLFYTSD-FGLQSEEKRILEGTFVNPDLCKITEDLVFTDPFGHYDTNDYE-PDLQL 192 Query: 369 DAEAVREDDGLKLEIAELKSMFIERAQALIHGDLHTGSIMVTPDSTQVIDPEFAFYAPMG 548 + + D LKL++A+ K F+ R + LIHGDLHTGSI +P T+VIDPEFA Y P G Sbjct: 193 VVDELWSDKTLKLKVAQYKYKFLTRKETLIHGDLHTGSIFSSPSETKVIDPEFATYGPFG 252 Query: 549 YDIGAFLGNLIL 584 +DIG F+ NL+L Sbjct: 253 FDIGQFIANLLL 264
>CNIH_MOUSE (O35372) Cornichon homolog| Length = 144 Score = 37.0 bits (84), Expect = 0.048 Identities = 17/51 (33%), Positives = 27/51 (52%) Frame = +3 Query: 141 LIAGVHYPLLAHHMADYMANTLFFTSLLYNSTTHHKKQVARYCENVEMCRL 293 L G++ PLLA+H+ YM+ + LY+ TT + YC+ C+L Sbjct: 73 LTLGLNMPLLAYHIWRYMSRPVMSAPGLYDPTTIMNADILAYCQKEGWCKL 123
>CNIH_PONPY (Q5RDB5) Cornichon homolog| Length = 144 Score = 36.2 bits (82), Expect = 0.082 Identities = 17/51 (33%), Positives = 27/51 (52%) Frame = +3 Query: 141 LIAGVHYPLLAHHMADYMANTLFFTSLLYNSTTHHKKQVARYCENVEMCRL 293 L G++ PLLA+H+ YM+ + LY+ TT + YC+ C+L Sbjct: 73 LTLGLNMPLLAYHIWRYMSRPVMSGPGLYDPTTIMNADILAYCQKEGWCKL 123
>CNIH_HUMAN (O95406) Cornichon homolog (TGAM77)| Length = 144 Score = 36.2 bits (82), Expect = 0.082 Identities = 17/51 (33%), Positives = 27/51 (52%) Frame = +3 Query: 141 LIAGVHYPLLAHHMADYMANTLFFTSLLYNSTTHHKKQVARYCENVEMCRL 293 L G++ PLLA+H+ YM+ + LY+ TT + YC+ C+L Sbjct: 73 LTLGLNMPLLAYHIWRYMSRPVMSGPGLYDPTTIMNADILAYCQKEGWCKL 123
>CNIH_BOVIN (Q5BIN6) Cornichon homolog| Length = 144 Score = 36.2 bits (82), Expect = 0.082 Identities = 17/51 (33%), Positives = 27/51 (52%) Frame = +3 Query: 141 LIAGVHYPLLAHHMADYMANTLFFTSLLYNSTTHHKKQVARYCENVEMCRL 293 L G++ PLLA+H+ YM+ + LY+ TT + YC+ C+L Sbjct: 73 LTLGLNMPLLAYHIWRYMSRPVMSGPGLYDPTTIMNADILAYCQKEGWCKL 123
>RL5_ANOGA (O44248) 60S ribosomal protein L5| Length = 327 Score = 32.3 bits (72), Expect = 1.2 Identities = 16/39 (41%), Positives = 20/39 (51%) Frame = -1 Query: 603 HPVQSTPESGSPRKPQCRNPSARRRQTLDRSLEWNLGSP 487 +P + +P SG R P CR+P ARRR R W P Sbjct: 256 NPRRRSPRSGG-RWPSCRSPPARRRSRSTRPTSWPRSRP 293
>KT3K_HUMAN (Q9HA64) Ketosamine-3-kinase (EC 2.7.1.-)| (Fructosamine-3-kinase-related protein) Length = 309 Score = 31.6 bits (70), Expect = 2.0 Identities = 27/87 (31%), Positives = 41/87 (47%), Gaps = 3/87 (3%) Frame = +3 Query: 369 DAEAVREDDGLKLEIAELKSMFIERAQALIHGDLHTGSIMVTPDSTQVIDPEFAFYAPMG 548 D EA++ L+L+I +L +E AL+HGDL G++ + DP +FY Sbjct: 186 DREALQLWSALQLKIPDL-FRDLEIIPALLHGDLWGGNVAEDSSGPVIFDPA-SFYGHSE 243 Query: 549 YDI---GAFLGNLILAYFAQDGHADQA 620 Y++ G F G Y A G +A Sbjct: 244 YELAIAGMFGGFSSSFYSAYHGKIPKA 270
>ARGC1_PSEPK (Q88QQ6) N-acetyl-gamma-glutamyl-phosphate reductase 1 (EC| 1.2.1.38) (AGPR 1) (N-acetyl-glutamate semialdehyde dehydrogenase 1) (NAGSA dehydrogenase 1) Length = 344 Score = 31.6 bits (70), Expect = 2.0 Identities = 15/46 (32%), Positives = 24/46 (52%) Frame = -2 Query: 578 QVPQESPNVVTHRRVEGKLWIDHLSGIWGHHDGTSMEIPMNQSLGS 441 Q PQ V+T R G D + GH+DG + +P +++LG+ Sbjct: 23 QHPQAEVAVITSRSEAGVAVADMYPNLRGHYDGLAFSVPDSKALGA 68
>KT3K_MOUSE (Q8K274) Ketosamine-3-kinase (EC 2.7.1.-)| (Fructosamine-3-kinase-related protein) Length = 309 Score = 31.2 bits (69), Expect = 2.6 Identities = 24/83 (28%), Positives = 39/83 (46%), Gaps = 6/83 (7%) Frame = +3 Query: 369 DAEAVREDDGLKLEIAELKSMFIERAQALIHGDLHTGSIMVTPDSTQVIDPEFAFYAPMG 548 D EA+ L+L+I +L +E AL+HGDL G++ + DP +FY Sbjct: 186 DREALELWSALQLKIPDL-FRDLEIVPALLHGDLWGGNVAEDSSGPIIFDPA-SFYGHSE 243 Query: 549 YDI------GAFLGNLILAYFAQ 599 Y++ G F + AY ++ Sbjct: 244 YELAIAGMFGGFSSSFYSAYHSK 266
>WNK1_HUMAN (Q9H4A3) Serine/threonine-protein kinase WNK1 (EC 2.7.11.1) (Protein| kinase with no lysine 1) (Protein kinase, lysine-deficient 1) (Kinase deficient protein) Length = 2382 Score = 30.8 bits (68), Expect = 3.5 Identities = 14/39 (35%), Positives = 23/39 (58%) Frame = +3 Query: 339 NRWNSPFLDKDAEAVREDDGLKLEIAELKSMFIERAQAL 455 N +NS ++ D E+ ED+ LKLE+ L+ ++ Q L Sbjct: 2052 NSFNSSYMSSDNESDIEDEDLKLELRRLRDKHLKEIQDL 2090
>FPRA_RHOCA (P18607) Type A flavoprotein fprA (EC 1.-.-.-) (FMN-protein fprA)| (Flavoprotein A) Length = 435 Score = 29.6 bits (65), Expect = 7.7 Identities = 38/141 (26%), Positives = 57/141 (40%), Gaps = 16/141 (11%) Frame = +3 Query: 33 GRLCPDHVPEV-----YHFDRAMSLIGMRYIKPPHII--LRKGLIAGVHYPLLAHHMADY 191 GRL D V + Y+FDR M + +I L G+IA H P+L H DY Sbjct: 195 GRLFNDLVGDFRFSFEYYFDRIMRPFRSFVAQALDLIEPLDFGIIAPAHGPILRSHPRDY 254 Query: 192 MANTLFFTSLLYNSTTHHKK-----QVARYCENVEMCRLTEQVVFSDP-YMVSKYNRWN- 350 + +T S + T +K V+ Y ++ + P VS ++ Sbjct: 255 LTHTRRLISSRLAAETGSEKTLLIFYVSAYGATAQLAQAIHDGAAESPDVRVSLFDLEGG 314 Query: 351 --SPFLDKDAEAVREDDGLKL 407 +PFLD + E DG+ L Sbjct: 315 EITPFLD----LIEEADGIAL 331 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 81,224,303 Number of Sequences: 219361 Number of extensions: 1749921 Number of successful extensions: 5569 Number of sequences better than 10.0: 13 Number of HSP's better than 10.0 without gapping: 5364 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5562 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5824436538 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
