| Clone Name | bah41b23 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY593959.1| Oryza sativa (japonica cultivar-group) methylthioribose kinase (MTK1) mRNA, complete cds Length = 1478 Score = 573 bits (289), Expect = e-160 Identities = 544/629 (86%) Strand = Plus / Plus Query: 2 ctacttcgaggcgtcggcgctgcgggagcacggccgcctctgcccggaccacgtcccgga 61 |||||||||||| || ||||||| | ||||| || |||||||||||||||| ||||| || Sbjct: 276 ctacttcgaggcctccgcgctgcagaagcaccgcggcctctgcccggaccatgtccccga 335 Query: 62 ggtctaccacttcgaccgcgccatgtcgctcatcgggatgcgctacatcaagccgcccca 121 |||||||||||||||||| ||||||||||| |||||||||||||||||| ||||||| || Sbjct: 336 ggtctaccacttcgaccgggccatgtcgctgatcgggatgcgctacatcgagccgccgca 395 Query: 122 catcatcctccgcaagggcctcatcgccggcgtccactacccgctcctcgcccaccacat 181 ||||||||||||||||||||||||||| |||||| | |||||||| |||||| | ||||| Sbjct: 396 catcatcctccgcaagggcctcatcgctggcgtcgagtacccgctgctcgccgagcacat 455 Query: 182 ggccgactacatggccaacaccctcttcttcacctccctcctctacaactccaccaccca 241 ||| || ||||||||||| || ||||||||||||||||| ||||||||||||||||| | Sbjct: 456 ggcggattacatggccaagacgctcttcttcacctcccttctctacaactccaccactga 515 Query: 242 ccacaagaaacaagttgctcgctactgcgagaacgtggagatgtgcaggctcacggagca 301 ||||||||| |||||||| |||||||| || ||||||||||| |||||||| ||||| Sbjct: 516 tcacaagaaagcagttgctcagtactgcgataatgtggagatgtgtaggctcacagagca 575 Query: 302 ggtcgtgttctcggacccatacatggtctccaaatacaatcgctggaactcgccgttcct 361 ||||||||||| |||||||||||| || ||||||||||||| || | || || ||||| Sbjct: 576 agtcgtgttctcagacccatacatgctcgccaaatacaatcgttgcacatcacccttcct 635 Query: 362 cgacaaggacgccgaagcagttcgggaggatgatgggctcaagttggaaattgctgaact 421 || || || || | ||| ||||| ||||||| || ||| || ||||| ||||||||| | Sbjct: 636 agataatgatgctgcagcggttcgagaggatgctgagcttaaattggagattgctgaatt 695 Query: 422 gaagtcgatgtttattgagagagcccaggctctgattcatggggatctccatactggttc 481 ||| || ||||||||||||||||| |||||||| ||||||| |||||||| |||||||| Sbjct: 696 gaaatcaatgtttattgagagagcacaggctcttcttcatggagatctccacactggttc 755 Query: 482 catcatggtgaccccagattccactcaagtgatcgatccagagtttgccttctacgcgcc 541 |||||||||||| |||||||| ||||||||||| |||||||| ||||| ||||| | || Sbjct: 756 catcatggtgacaccagattctactcaagtgattgatccagaatttgctttctatggccc 815 Query: 542 gatgggttacgacattggggctttcttggggaacctgattctggcgtactttgcacagga 601 |||||||||||||||||||| ||| |||||||| ||||| |||| || ||| |||| || Sbjct: 816 aatgggttacgacattggggccttcctggggaacttgattttggcatatttttcacaaga 875 Query: 602 tgggcatgctgatcaagcaaatgaccgta 630 ||| || ||||||||||||||||| |||| Sbjct: 876 tggacacgctgatcaagcaaatgatcgta 904
>ref|XM_474287.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1293 Score = 573 bits (289), Expect = e-160 Identities = 544/629 (86%) Strand = Plus / Plus Query: 2 ctacttcgaggcgtcggcgctgcgggagcacggccgcctctgcccggaccacgtcccgga 61 |||||||||||| || ||||||| | ||||| || |||||||||||||||| ||||| || Sbjct: 273 ctacttcgaggcctccgcgctgcagaagcaccgcggcctctgcccggaccatgtccccga 332 Query: 62 ggtctaccacttcgaccgcgccatgtcgctcatcgggatgcgctacatcaagccgcccca 121 |||||||||||||||||| ||||||||||| |||||||||||||||||| ||||||| || Sbjct: 333 ggtctaccacttcgaccgggccatgtcgctgatcgggatgcgctacatcgagccgccgca 392 Query: 122 catcatcctccgcaagggcctcatcgccggcgtccactacccgctcctcgcccaccacat 181 ||||||||||||||||||||||||||| |||||| | |||||||| |||||| | ||||| Sbjct: 393 catcatcctccgcaagggcctcatcgctggcgtcgagtacccgctgctcgccgagcacat 452 Query: 182 ggccgactacatggccaacaccctcttcttcacctccctcctctacaactccaccaccca 241 ||| || ||||||||||| || ||||||||||||||||| ||||||||||||||||| | Sbjct: 453 ggcggattacatggccaagacgctcttcttcacctcccttctctacaactccaccactga 512 Query: 242 ccacaagaaacaagttgctcgctactgcgagaacgtggagatgtgcaggctcacggagca 301 ||||||||| |||||||| |||||||| || ||||||||||| |||||||| ||||| Sbjct: 513 tcacaagaaaggagttgctcagtactgcgataatgtggagatgtgtaggctcacagagca 572 Query: 302 ggtcgtgttctcggacccatacatggtctccaaatacaatcgctggaactcgccgttcct 361 ||||||||||| |||||||||||| || ||||||||||||| || | || || ||||| Sbjct: 573 agtcgtgttctcagacccatacatgctcgccaaatacaatcgttgcacatcacccttcct 632 Query: 362 cgacaaggacgccgaagcagttcgggaggatgatgggctcaagttggaaattgctgaact 421 || || || || | ||| ||||| ||||||| || ||| || ||||| ||||||||| | Sbjct: 633 agataatgatgctgcagcggttcgagaggatgctgagcttaaattggagattgctgaatt 692 Query: 422 gaagtcgatgtttattgagagagcccaggctctgattcatggggatctccatactggttc 481 ||| || ||||||||||||||||| |||||||| ||||||| |||||||| |||||||| Sbjct: 693 gaaatcaatgtttattgagagagcacaggctcttcttcatggagatctccacactggttc 752 Query: 482 catcatggtgaccccagattccactcaagtgatcgatccagagtttgccttctacgcgcc 541 |||||||||||| |||||||| ||||||||||| |||||||| ||||| ||||| | || Sbjct: 753 catcatggtgacaccagattctactcaagtgattgatccagaatttgctttctatggccc 812 Query: 542 gatgggttacgacattggggctttcttggggaacctgattctggcgtactttgcacagga 601 |||||||||||||||||||| ||| |||||||| ||||| |||| || ||| |||| || Sbjct: 813 aatgggttacgacattggggccttcctggggaacttgattttggcatatttttcacaaga 872 Query: 602 tgggcatgctgatcaagcaaatgaccgta 630 ||| || ||||||||||||||||| |||| Sbjct: 873 tggacacgctgatcaagcaaatgatcgta 901
>dbj|AK067649.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013114G08, full insert sequence Length = 1698 Score = 573 bits (289), Expect = e-160 Identities = 544/629 (86%) Strand = Plus / Plus Query: 2 ctacttcgaggcgtcggcgctgcgggagcacggccgcctctgcccggaccacgtcccgga 61 |||||||||||| || ||||||| | ||||| || |||||||||||||||| ||||| || Sbjct: 375 ctacttcgaggcctccgcgctgcagaagcaccgcggcctctgcccggaccatgtccccga 434 Query: 62 ggtctaccacttcgaccgcgccatgtcgctcatcgggatgcgctacatcaagccgcccca 121 |||||||||||||||||| ||||||||||| |||||||||||||||||| ||||||| || Sbjct: 435 ggtctaccacttcgaccgggccatgtcgctgatcgggatgcgctacatcgagccgccaca 494 Query: 122 catcatcctccgcaagggcctcatcgccggcgtccactacccgctcctcgcccaccacat 181 ||||||||||||||||||||||||||| |||||| | |||||||| |||||| | ||||| Sbjct: 495 catcatcctccgcaagggcctcatcgctggcgtcgagtacccgctgctcgccgagcacat 554 Query: 182 ggccgactacatggccaacaccctcttcttcacctccctcctctacaactccaccaccca 241 ||| || ||||||||||| || ||||||||||||||||| ||||||||||||||||| | Sbjct: 555 ggcggattacatggccaagacgctcttcttcacctcccttctctacaactccaccactga 614 Query: 242 ccacaagaaacaagttgctcgctactgcgagaacgtggagatgtgcaggctcacggagca 301 ||||||||| |||||||| |||||||| || ||||||||||| |||||||| ||||| Sbjct: 615 tcacaagaaaggagttgctcagtactgcgataatgtggagatgtgtaggctcacagagca 674 Query: 302 ggtcgtgttctcggacccatacatggtctccaaatacaatcgctggaactcgccgttcct 361 ||||||||||| |||||||||||| || ||||||||||||| || | || || ||||| Sbjct: 675 agtcgtgttctcagacccatacatgctcgccaaatacaatcgttgcacatcacccttcct 734 Query: 362 cgacaaggacgccgaagcagttcgggaggatgatgggctcaagttggaaattgctgaact 421 || || || || | ||| ||||| ||||||| || ||| || ||||| ||||||||| | Sbjct: 735 agataatgatgctgcagcggttcgagaggatgctgagcttaaattggagattgctgaatt 794 Query: 422 gaagtcgatgtttattgagagagcccaggctctgattcatggggatctccatactggttc 481 ||| || ||||||||||||||||| |||||||| ||||||| |||||||| |||||||| Sbjct: 795 gaaatcaatgtttattgagagagcacaggctcttcttcatggagatctccacactggttc 854 Query: 482 catcatggtgaccccagattccactcaagtgatcgatccagagtttgccttctacgcgcc 541 |||||||||||| |||||||| ||||||||||| |||||||| ||||| ||||| | || Sbjct: 855 catcatggtgacaccagattctactcaagtgattgatccagaatttgctttctatggccc 914 Query: 542 gatgggttacgacattggggctttcttggggaacctgattctggcgtactttgcacagga 601 |||||||||||||||||||| ||| |||||||| ||||| |||| || ||| |||| || Sbjct: 915 aatgggttacgacattggggccttcctggggaacttgattttggcatatttttcacaaga 974 Query: 602 tgggcatgctgatcaagcaaatgaccgta 630 ||| || ||||||||||||||||| |||| Sbjct: 975 tggacacgctgatcaagcaaatgatcgta 1003
>ref|XM_474288.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1284 Score = 494 bits (249), Expect = e-136 Identities = 531/625 (84%) Strand = Plus / Plus Query: 6 ttcgaggcgtcggcgctgcgggagcacggccgcctctgcccggaccacgtcccggaggtc 65 |||||||| || ||||||| | ||||| || ||||||||||||||| ||||| |||||| Sbjct: 268 ttcgaggcctccgcgctgcagaagcaccgcgccctctgcccggaccatgtccccgaggtc 327 Query: 66 taccacttcgaccgcgccatgtcgctcatcgggatgcgctacatcaagccgccccacatc 125 |||||||||||||| |||||||||||||||||||||||||||||| ||||||| |||||| Sbjct: 328 taccacttcgaccgtgccatgtcgctcatcgggatgcgctacatcgagccgccgcacatc 387 Query: 126 atcctccgcaagggcctcatcgccggcgtccactacccgctcctcgcccaccacatggcc 185 |||||||||||||||||| ||||||||||| | |||||||| |||||| | |||||||| Sbjct: 388 atcctccgcaagggcctcgtcgccggcgtcgagtacccgctgctcgccgagcacatggcg 447 Query: 186 gactacatggccaacaccctcttcttcacctccctcctctacaactccaccacccaccac 245 || ||||||||||| || ||||||||||| || || ||||||||||||||||| | ||| Sbjct: 448 gattacatggccaagacgctcttcttcacttcacttctctacaactccaccactgatcac 507 Query: 246 aagaaacaagttgctcgctactgcgagaacgtggagatgtgcaggctcacggagcaggtc 305 |||||| |||||||| || ||||| || ||||||||| |||||||||| || || || Sbjct: 508 aagaaaggagttgctcagtattgcgataatgtggagatgagcaggctcacagaacaagtt 567 Query: 306 gtgttctcggacccatacatggtctccaaatacaatcgctggaactcgccgttcctcgac 365 || ||||| || ||||||| |||| |||||||||||||||| | || || ||||| || Sbjct: 568 gtattctcagatccatacagggtcgccaaatacaatcgctgcacatcacccttccttgat 627 Query: 366 aaggacgccgaagcagttcgggaggatgatgggctcaagttggaaattgctgaactgaag 425 || || || | ||| ||||| ||||||| || ||| |||||||| ||||||||| | || Sbjct: 628 aatgatgctgcagcggttcgagaggatgctgagcttaagttggagattgctgaattaaaa 687 Query: 426 tcgatgtttattgagagagcccaggctctgattcatggggatctccatactggttccatc 485 || ||||||||||||||||| || ||| | ||||||| |||||||| ||| |||||||| Sbjct: 688 tcaatgtttattgagagagcacaagcttttcttcatggagatctccacactagttccatc 747 Query: 486 atggtgaccccagattccactcaagtgatcgatccagagtttgccttctacgcgccgatg 545 |||||||| |||||||| ||||||||||| |||||||| ||||| ||||| | || ||| Sbjct: 748 atggtgacaccagattctactcaagtgattgatccagaatttgctttctatggcccaatg 807 Query: 546 ggttacgacattggggctttcttggggaacctgattctggcgtactttgcacaggatggg 605 |||||||| |||||||| ||| |||||||| ||||| |||| || ||| |||| ||||| Sbjct: 808 ggttacgatattggggccttcctggggaacttgattttggcatatttttcacaagatgga 867 Query: 606 catgctgatcaagcaaatgaccgta 630 |||||||||||||||||||| |||| Sbjct: 868 catgctgatcaagcaaatgatcgta 892
>gb|AY104731.1| Zea mays PCO103407 mRNA sequence Length = 1011 Score = 396 bits (200), Expect = e-107 Identities = 528/632 (83%), Gaps = 4/632 (0%) Strand = Plus / Plus Query: 2 ctacttcgaggcgtcggcgctgcgggagcacggccgcctctgcccggaccacgtcccgga 61 |||||||||||| || |||||||||||||||||||||| |||||||| ||| ||| || Sbjct: 321 ctacttcgaggcctccacgctgcgggagcacggccgcctgtgcccggagcacacccccga 380 Query: 62 ggtctaccacttcgaccgcgccatgtcgctcatcgggatgcgctacatcaagccgcccca 121 ||| |||||||||||||| || ||||||| || ||||||||||||||| |||| || || Sbjct: 381 ggtgtaccacttcgaccggaccttgtcgctgatggggatgcgctacatcgagcccccgca 440 Query: 122 catcatcctccgcaagggcctcatcgccggcgtccactacccgctcctcgcccaccacat 181 |||||||||||||||||||||| ||||||| ||| | |||||||| |||||| ||||||| Sbjct: 441 catcatcctccgcaagggcctcgtcgccggtgtcgagtacccgctgctcgccgaccacat 500 Query: 182 ggccgactacatggccaacaccctcttcttcacctccctcctctacaactccaccaccca 241 | |||| ||||||||||| || ||||||||||||||||||||||| ||| ||||| | Sbjct: 501 gtccgattacatggccaagacgctcttcttcacctccctcctctataacaataccacgga 560 Query: 242 ccacaagaaacaagttgctcgctactgcgagaacgtggagatgtgcaggctcacggagca 301 || ||||| ||||||| |||| | ||||||||||||||| |||||||||||||| Sbjct: 561 tcataagaacggagttgctaagtactctgcgaacgtggagatgtgtaggctcacggagca 620 Query: 302 ggtcgtgttctcggacccatacatggtctccaaatacaatcgctggaactcgccgttcct 361 || |||||||||||||||||| || ||||||| ||||| |||| |||||| | || Sbjct: 621 agttgtgttctcggacccataccgtgtttccaaatttaatcggtggacctcgccttatct 680 Query: 362 cgacaaggacgccgaagcagttcgggaggatgatgggctcaagttggaaattgctgaact 421 |||||| || || || |||||||| |||||||||| ||||||||||||| | |||| || Sbjct: 681 cgacaaagatgctgaggcagttcgcgaggatgatgagctcaagttggaagtagctgggct 740 Query: 422 gaagtcgatgtttattgagagagcccaggctctgattcatggggatctccatactggttc 481 ||| ||||||||||| |||||||| || |||||||||||||| |||||||| |||||||| Sbjct: 741 gaaatcgatgtttatcgagagagctcaagctctgattcatggagatctccacactggttc 800 Query: 482 catcatggtgaccccagattccactcaagtgatcgatccagagtttgccttcta-cgcgc 540 |||||||||||| || ||| |||||||| || |||||||| |||| ||||| | || Sbjct: 801 tatcatggtgaccgaag-ttcaactcaagtcattgatccagaatttgggttctatggggc 859 Query: 541 cgatgggttacgacattggg-gctttcttggggaacctgattct-ggcgtactttgcaca 598 | ||||| | || |||||| || ||| | || ||||||||| | ||| |||| |||||| Sbjct: 860 caatggggtttgatattgggagccttccttggaaacctgattttgggcatactatgcaca 919 Query: 599 ggatgggcatgctgatcaagcaaatgaccgta 630 | ||||||||||||||||||| ||||| |||| Sbjct: 920 gaatgggcatgctgatcaagcgaatgatcgta 951
>emb|AL606619.3|OSJN00032 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0043A12, complete sequence Length = 190432 Score = 289 bits (146), Expect = 6e-75 Identities = 224/250 (89%) Strand = Plus / Minus Query: 2 ctacttcgaggcgtcggcgctgcgggagcacggccgcctctgcccggaccacgtcccgga 61 |||||||||||| || ||||||| | ||||| || |||||||||||||||| ||||| || Sbjct: 103381 ctacttcgaggcctccgcgctgcagaagcaccgcggcctctgcccggaccatgtccccga 103322 Query: 62 ggtctaccacttcgaccgcgccatgtcgctcatcgggatgcgctacatcaagccgcccca 121 |||||||||||||||||| ||||||||||| |||||||||||||||||| ||||||| || Sbjct: 103321 ggtctaccacttcgaccgggccatgtcgctgatcgggatgcgctacatcgagccgccgca 103262 Query: 122 catcatcctccgcaagggcctcatcgccggcgtccactacccgctcctcgcccaccacat 181 ||||||||||||||||||||||||||| |||||| | |||||||| |||||| | ||||| Sbjct: 103261 catcatcctccgcaagggcctcatcgctggcgtcgagtacccgctgctcgccgagcacat 103202 Query: 182 ggccgactacatggccaacaccctcttcttcacctccctcctctacaactccaccaccca 241 ||| || ||||||||||| || ||||||||||||||||| ||||||||||||||||| | Sbjct: 103201 ggcggattacatggccaagacgctcttcttcacctcccttctctacaactccaccactga 103142 Query: 242 ccacaagaaa 251 ||||||||| Sbjct: 103141 tcacaagaaa 103132 Score = 266 bits (134), Expect = 8e-68 Identities = 218/246 (88%) Strand = Plus / Minus Query: 6 ttcgaggcgtcggcgctgcgggagcacggccgcctctgcccggaccacgtcccggaggtc 65 |||||||| || ||||||| | ||||| || ||||||||||||||| ||||| |||||| Sbjct: 109187 ttcgaggcctccgcgctgcagaagcaccgcgccctctgcccggaccatgtccccgaggtc 109128 Query: 66 taccacttcgaccgcgccatgtcgctcatcgggatgcgctacatcaagccgccccacatc 125 |||||||||||||| |||||||||||||||||||||||||||||| ||||||| |||||| Sbjct: 109127 taccacttcgaccgtgccatgtcgctcatcgggatgcgctacatcgagccgccgcacatc 109068 Query: 126 atcctccgcaagggcctcatcgccggcgtccactacccgctcctcgcccaccacatggcc 185 |||||||||||||||||| ||||||||||| | |||||||| |||||| | |||||||| Sbjct: 109067 atcctccgcaagggcctcgtcgccggcgtcgagtacccgctgctcgccgagcacatggcg 109008 Query: 186 gactacatggccaacaccctcttcttcacctccctcctctacaactccaccacccaccac 245 || ||||||||||| || ||||||||||| || || ||||||||||||||||| | ||| Sbjct: 109007 gattacatggccaagacgctcttcttcacttcacttctctacaactccaccactgatcac 108948 Query: 246 aagaaa 251 |||||| Sbjct: 108947 aagaaa 108942 Score = 198 bits (100), Expect = 2e-47 Identities = 175/200 (87%) Strand = Plus / Minus Query: 431 gtttattgagagagcccaggctctgattcatggggatctccatactggttccatcatggt 490 ||||||||||||||| |||||||| ||||||| |||||||| ||||||||||||||||| Sbjct: 102725 gtttattgagagagcacaggctcttcttcatggagatctccacactggttccatcatggt 102666 Query: 491 gaccccagattccactcaagtgatcgatccagagtttgccttctacgcgccgatgggtta 550 ||| |||||||| ||||||||||| |||||||| ||||| ||||| | || |||||||| Sbjct: 102665 gacaccagattctactcaagtgattgatccagaatttgctttctatggcccaatgggtta 102606 Query: 551 cgacattggggctttcttggggaacctgattctggcgtactttgcacaggatgggcatgc 610 |||||||||||| ||| |||||||| ||||| |||| || ||| |||| ||||| || || Sbjct: 102605 cgacattggggccttcctggggaacttgattttggcatatttttcacaagatggacacgc 102546 Query: 611 tgatcaagcaaatgaccgta 630 ||||||||||||||| |||| Sbjct: 102545 tgatcaagcaaatgatcgta 102526 Score = 174 bits (88), Expect = 2e-40 Identities = 172/200 (86%) Strand = Plus / Minus Query: 431 gtttattgagagagcccaggctctgattcatggggatctccatactggttccatcatggt 490 ||||||||||||||| || ||| | ||||||| |||||||| ||| ||||||||||||| Sbjct: 108587 gtttattgagagagcacaagcttttcttcatggagatctccacactagttccatcatggt 108528 Query: 491 gaccccagattccactcaagtgatcgatccagagtttgccttctacgcgccgatgggtta 550 ||| |||||||| ||||||||||| |||||||| ||||| ||||| | || |||||||| Sbjct: 108527 gacaccagattctactcaagtgattgatccagaatttgctttctatggcccaatgggtta 108468 Query: 551 cgacattggggctttcttggggaacctgattctggcgtactttgcacaggatgggcatgc 610 ||| |||||||| ||| |||||||| ||||| |||| || ||| |||| ||||| ||||| Sbjct: 108467 cgatattggggccttcctggggaacttgattttggcatatttttcacaagatggacatgc 108408 Query: 611 tgatcaagcaaatgaccgta 630 ||||||||||||||| |||| Sbjct: 108407 tgatcaagcaaatgatcgta 108388 Score = 101 bits (51), Expect = 3e-18 Identities = 141/171 (82%) Strand = Plus / Minus Query: 254 agttgctcgctactgcgagaacgtggagatgtgcaggctcacggagcaggtcgtgttctc 313 |||||||| |||||||| || ||||||||||| |||||||| ||||| ||||||||||| Sbjct: 102981 agttgctcagtactgcgataatgtggagatgtgtaggctcacagagcaagtcgtgttctc 102922 Query: 314 ggacccatacatggtctccaaatacaatcgctggaactcgccgttcctcgacaaggacgc 373 |||||||||||| || ||||||||||||| || | || || ||||| || || || || Sbjct: 102921 agacccatacatgctcgccaaatacaatcgttgcacatcacccttcctagataatgatgc 102862 Query: 374 cgaagcagttcgggaggatgatgggctcaagttggaaattgctgaactgaa 424 | ||| ||||| ||||||| || ||| || ||||| ||||||||| |||| Sbjct: 102861 tgcagcggttcgagaggatgctgagcttaaattggagattgctgaattgaa 102811 Score = 75.8 bits (38), Expect = 2e-10 Identities = 134/166 (80%) Strand = Plus / Minus Query: 254 agttgctcgctactgcgagaacgtggagatgtgcaggctcacggagcaggtcgtgttctc 313 |||||||| || ||||| || ||||||||| |||||||||| || || || || ||||| Sbjct: 108841 agttgctcagtattgcgataatgtggagatgagcaggctcacagaacaagttgtattctc 108782 Query: 314 ggacccatacatggtctccaaatacaatcgctggaactcgccgttcctcgacaaggacgc 373 || ||||||| |||| |||||||||||||||| | || || ||||| || || || || Sbjct: 108781 agatccatacagggtcgccaaatacaatcgctgcacatcacccttccttgataatgatgc 108722 Query: 374 cgaagcagttcgggaggatgatgggctcaagttggaaattgctgaa 419 | ||| ||||| ||||||| || ||| |||||||| ||||||||| Sbjct: 108721 tgcagcggttcgagaggatgctgagcttaagttggagattgctgaa 108676
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 289 bits (146), Expect = 6e-75 Identities = 224/250 (89%) Strand = Plus / Minus Query: 2 ctacttcgaggcgtcggcgctgcgggagcacggccgcctctgcccggaccacgtcccgga 61 |||||||||||| || ||||||| | ||||| || |||||||||||||||| ||||| || Sbjct: 34191999 ctacttcgaggcctccgcgctgcagaagcaccgcggcctctgcccggaccatgtccccga 34191940 Query: 62 ggtctaccacttcgaccgcgccatgtcgctcatcgggatgcgctacatcaagccgcccca 121 |||||||||||||||||| ||||||||||| |||||||||||||||||| ||||||| || Sbjct: 34191939 ggtctaccacttcgaccgggccatgtcgctgatcgggatgcgctacatcgagccgccgca 34191880 Query: 122 catcatcctccgcaagggcctcatcgccggcgtccactacccgctcctcgcccaccacat 181 ||||||||||||||||||||||||||| |||||| | |||||||| |||||| | ||||| Sbjct: 34191879 catcatcctccgcaagggcctcatcgctggcgtcgagtacccgctgctcgccgagcacat 34191820 Query: 182 ggccgactacatggccaacaccctcttcttcacctccctcctctacaactccaccaccca 241 ||| || ||||||||||| || ||||||||||||||||| ||||||||||||||||| | Sbjct: 34191819 ggcggattacatggccaagacgctcttcttcacctcccttctctacaactccaccactga 34191760 Query: 242 ccacaagaaa 251 ||||||||| Sbjct: 34191759 tcacaagaaa 34191750 Score = 266 bits (134), Expect = 8e-68 Identities = 218/246 (88%) Strand = Plus / Minus Query: 6 ttcgaggcgtcggcgctgcgggagcacggccgcctctgcccggaccacgtcccggaggtc 65 |||||||| || ||||||| | ||||| || ||||||||||||||| ||||| |||||| Sbjct: 34197805 ttcgaggcctccgcgctgcagaagcaccgcgccctctgcccggaccatgtccccgaggtc 34197746 Query: 66 taccacttcgaccgcgccatgtcgctcatcgggatgcgctacatcaagccgccccacatc 125 |||||||||||||| |||||||||||||||||||||||||||||| ||||||| |||||| Sbjct: 34197745 taccacttcgaccgtgccatgtcgctcatcgggatgcgctacatcgagccgccgcacatc 34197686 Query: 126 atcctccgcaagggcctcatcgccggcgtccactacccgctcctcgcccaccacatggcc 185 |||||||||||||||||| ||||||||||| | |||||||| |||||| | |||||||| Sbjct: 34197685 atcctccgcaagggcctcgtcgccggcgtcgagtacccgctgctcgccgagcacatggcg 34197626 Query: 186 gactacatggccaacaccctcttcttcacctccctcctctacaactccaccacccaccac 245 || ||||||||||| || ||||||||||| || || ||||||||||||||||| | ||| Sbjct: 34197625 gattacatggccaagacgctcttcttcacttcacttctctacaactccaccactgatcac 34197566 Query: 246 aagaaa 251 |||||| Sbjct: 34197565 aagaaa 34197560 Score = 198 bits (100), Expect = 2e-47 Identities = 175/200 (87%) Strand = Plus / Minus Query: 431 gtttattgagagagcccaggctctgattcatggggatctccatactggttccatcatggt 490 ||||||||||||||| |||||||| ||||||| |||||||| ||||||||||||||||| Sbjct: 34191343 gtttattgagagagcacaggctcttcttcatggagatctccacactggttccatcatggt 34191284 Query: 491 gaccccagattccactcaagtgatcgatccagagtttgccttctacgcgccgatgggtta 550 ||| |||||||| ||||||||||| |||||||| ||||| ||||| | || |||||||| Sbjct: 34191283 gacaccagattctactcaagtgattgatccagaatttgctttctatggcccaatgggtta 34191224 Query: 551 cgacattggggctttcttggggaacctgattctggcgtactttgcacaggatgggcatgc 610 |||||||||||| ||| |||||||| ||||| |||| || ||| |||| ||||| || || Sbjct: 34191223 cgacattggggccttcctggggaacttgattttggcatatttttcacaagatggacacgc 34191164 Query: 611 tgatcaagcaaatgaccgta 630 ||||||||||||||| |||| Sbjct: 34191163 tgatcaagcaaatgatcgta 34191144 Score = 174 bits (88), Expect = 2e-40 Identities = 172/200 (86%) Strand = Plus / Minus Query: 431 gtttattgagagagcccaggctctgattcatggggatctccatactggttccatcatggt 490 ||||||||||||||| || ||| | ||||||| |||||||| ||| ||||||||||||| Sbjct: 34197205 gtttattgagagagcacaagcttttcttcatggagatctccacactagttccatcatggt 34197146 Query: 491 gaccccagattccactcaagtgatcgatccagagtttgccttctacgcgccgatgggtta 550 ||| |||||||| ||||||||||| |||||||| ||||| ||||| | || |||||||| Sbjct: 34197145 gacaccagattctactcaagtgattgatccagaatttgctttctatggcccaatgggtta 34197086 Query: 551 cgacattggggctttcttggggaacctgattctggcgtactttgcacaggatgggcatgc 610 ||| |||||||| ||| |||||||| ||||| |||| || ||| |||| ||||| ||||| Sbjct: 34197085 cgatattggggccttcctggggaacttgattttggcatatttttcacaagatggacatgc 34197026 Query: 611 tgatcaagcaaatgaccgta 630 ||||||||||||||| |||| Sbjct: 34197025 tgatcaagcaaatgatcgta 34197006 Score = 101 bits (51), Expect = 3e-18 Identities = 141/171 (82%) Strand = Plus / Minus Query: 254 agttgctcgctactgcgagaacgtggagatgtgcaggctcacggagcaggtcgtgttctc 313 |||||||| |||||||| || ||||||||||| |||||||| ||||| ||||||||||| Sbjct: 34191599 agttgctcagtactgcgataatgtggagatgtgtaggctcacagagcaagtcgtgttctc 34191540 Query: 314 ggacccatacatggtctccaaatacaatcgctggaactcgccgttcctcgacaaggacgc 373 |||||||||||| || ||||||||||||| || | || || ||||| || || || || Sbjct: 34191539 agacccatacatgctcgccaaatacaatcgttgcacatcacccttcctagataatgatgc 34191480 Query: 374 cgaagcagttcgggaggatgatgggctcaagttggaaattgctgaactgaa 424 | ||| ||||| ||||||| || ||| || ||||| ||||||||| |||| Sbjct: 34191479 tgcagcggttcgagaggatgctgagcttaaattggagattgctgaattgaa 34191429 Score = 75.8 bits (38), Expect = 2e-10 Identities = 134/166 (80%) Strand = Plus / Minus Query: 254 agttgctcgctactgcgagaacgtggagatgtgcaggctcacggagcaggtcgtgttctc 313 |||||||| || ||||| || ||||||||| |||||||||| || || || || ||||| Sbjct: 34197459 agttgctcagtattgcgataatgtggagatgagcaggctcacagaacaagttgtattctc 34197400 Query: 314 ggacccatacatggtctccaaatacaatcgctggaactcgccgttcctcgacaaggacgc 373 || ||||||| |||| |||||||||||||||| | || || ||||| || || || || Sbjct: 34197399 agatccatacagggtcgccaaatacaatcgctgcacatcacccttccttgataatgatgc 34197340 Query: 374 cgaagcagttcgggaggatgatgggctcaagttggaaattgctgaa 419 | ||| ||||| ||||||| || ||| |||||||| ||||||||| Sbjct: 34197339 tgcagcggttcgagaggatgctgagcttaagttggagattgctgaa 34197294
>emb|AL732346.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0818H01, complete sequence Length = 101125 Score = 289 bits (146), Expect = 6e-75 Identities = 224/250 (89%) Strand = Plus / Minus Query: 2 ctacttcgaggcgtcggcgctgcgggagcacggccgcctctgcccggaccacgtcccgga 61 |||||||||||| || ||||||| | ||||| || |||||||||||||||| ||||| || Sbjct: 42679 ctacttcgaggcctccgcgctgcagaagcaccgcggcctctgcccggaccatgtccccga 42620 Query: 62 ggtctaccacttcgaccgcgccatgtcgctcatcgggatgcgctacatcaagccgcccca 121 |||||||||||||||||| ||||||||||| |||||||||||||||||| ||||||| || Sbjct: 42619 ggtctaccacttcgaccgggccatgtcgctgatcgggatgcgctacatcgagccgccgca 42560 Query: 122 catcatcctccgcaagggcctcatcgccggcgtccactacccgctcctcgcccaccacat 181 ||||||||||||||||||||||||||| |||||| | |||||||| |||||| | ||||| Sbjct: 42559 catcatcctccgcaagggcctcatcgctggcgtcgagtacccgctgctcgccgagcacat 42500 Query: 182 ggccgactacatggccaacaccctcttcttcacctccctcctctacaactccaccaccca 241 ||| || ||||||||||| || ||||||||||||||||| ||||||||||||||||| | Sbjct: 42499 ggcggattacatggccaagacgctcttcttcacctcccttctctacaactccaccactga 42440 Query: 242 ccacaagaaa 251 ||||||||| Sbjct: 42439 tcacaagaaa 42430 Score = 266 bits (134), Expect = 8e-68 Identities = 218/246 (88%) Strand = Plus / Minus Query: 6 ttcgaggcgtcggcgctgcgggagcacggccgcctctgcccggaccacgtcccggaggtc 65 |||||||| || ||||||| | ||||| || ||||||||||||||| ||||| |||||| Sbjct: 48485 ttcgaggcctccgcgctgcagaagcaccgcgccctctgcccggaccatgtccccgaggtc 48426 Query: 66 taccacttcgaccgcgccatgtcgctcatcgggatgcgctacatcaagccgccccacatc 125 |||||||||||||| |||||||||||||||||||||||||||||| ||||||| |||||| Sbjct: 48425 taccacttcgaccgtgccatgtcgctcatcgggatgcgctacatcgagccgccgcacatc 48366 Query: 126 atcctccgcaagggcctcatcgccggcgtccactacccgctcctcgcccaccacatggcc 185 |||||||||||||||||| ||||||||||| | |||||||| |||||| | |||||||| Sbjct: 48365 atcctccgcaagggcctcgtcgccggcgtcgagtacccgctgctcgccgagcacatggcg 48306 Query: 186 gactacatggccaacaccctcttcttcacctccctcctctacaactccaccacccaccac 245 || ||||||||||| || ||||||||||| || || ||||||||||||||||| | ||| Sbjct: 48305 gattacatggccaagacgctcttcttcacttcacttctctacaactccaccactgatcac 48246 Query: 246 aagaaa 251 |||||| Sbjct: 48245 aagaaa 48240 Score = 198 bits (100), Expect = 2e-47 Identities = 175/200 (87%) Strand = Plus / Minus Query: 431 gtttattgagagagcccaggctctgattcatggggatctccatactggttccatcatggt 490 ||||||||||||||| |||||||| ||||||| |||||||| ||||||||||||||||| Sbjct: 42023 gtttattgagagagcacaggctcttcttcatggagatctccacactggttccatcatggt 41964 Query: 491 gaccccagattccactcaagtgatcgatccagagtttgccttctacgcgccgatgggtta 550 ||| |||||||| ||||||||||| |||||||| ||||| ||||| | || |||||||| Sbjct: 41963 gacaccagattctactcaagtgattgatccagaatttgctttctatggcccaatgggtta 41904 Query: 551 cgacattggggctttcttggggaacctgattctggcgtactttgcacaggatgggcatgc 610 |||||||||||| ||| |||||||| ||||| |||| || ||| |||| ||||| || || Sbjct: 41903 cgacattggggccttcctggggaacttgattttggcatatttttcacaagatggacacgc 41844 Query: 611 tgatcaagcaaatgaccgta 630 ||||||||||||||| |||| Sbjct: 41843 tgatcaagcaaatgatcgta 41824 Score = 174 bits (88), Expect = 2e-40 Identities = 172/200 (86%) Strand = Plus / Minus Query: 431 gtttattgagagagcccaggctctgattcatggggatctccatactggttccatcatggt 490 ||||||||||||||| || ||| | ||||||| |||||||| ||| ||||||||||||| Sbjct: 47885 gtttattgagagagcacaagcttttcttcatggagatctccacactagttccatcatggt 47826 Query: 491 gaccccagattccactcaagtgatcgatccagagtttgccttctacgcgccgatgggtta 550 ||| |||||||| ||||||||||| |||||||| ||||| ||||| | || |||||||| Sbjct: 47825 gacaccagattctactcaagtgattgatccagaatttgctttctatggcccaatgggtta 47766 Query: 551 cgacattggggctttcttggggaacctgattctggcgtactttgcacaggatgggcatgc 610 ||| |||||||| ||| |||||||| ||||| |||| || ||| |||| ||||| ||||| Sbjct: 47765 cgatattggggccttcctggggaacttgattttggcatatttttcacaagatggacatgc 47706 Query: 611 tgatcaagcaaatgaccgta 630 ||||||||||||||| |||| Sbjct: 47705 tgatcaagcaaatgatcgta 47686 Score = 101 bits (51), Expect = 3e-18 Identities = 141/171 (82%) Strand = Plus / Minus Query: 254 agttgctcgctactgcgagaacgtggagatgtgcaggctcacggagcaggtcgtgttctc 313 |||||||| |||||||| || ||||||||||| |||||||| ||||| ||||||||||| Sbjct: 42279 agttgctcagtactgcgataatgtggagatgtgtaggctcacagagcaagtcgtgttctc 42220 Query: 314 ggacccatacatggtctccaaatacaatcgctggaactcgccgttcctcgacaaggacgc 373 |||||||||||| || ||||||||||||| || | || || ||||| || || || || Sbjct: 42219 agacccatacatgctcgccaaatacaatcgttgcacatcacccttcctagataatgatgc 42160 Query: 374 cgaagcagttcgggaggatgatgggctcaagttggaaattgctgaactgaa 424 | ||| ||||| ||||||| || ||| || ||||| ||||||||| |||| Sbjct: 42159 tgcagcggttcgagaggatgctgagcttaaattggagattgctgaattgaa 42109 Score = 75.8 bits (38), Expect = 2e-10 Identities = 134/166 (80%) Strand = Plus / Minus Query: 254 agttgctcgctactgcgagaacgtggagatgtgcaggctcacggagcaggtcgtgttctc 313 |||||||| || ||||| || ||||||||| |||||||||| || || || || ||||| Sbjct: 48139 agttgctcagtattgcgataatgtggagatgagcaggctcacagaacaagttgtattctc 48080 Query: 314 ggacccatacatggtctccaaatacaatcgctggaactcgccgttcctcgacaaggacgc 373 || ||||||| |||| |||||||||||||||| | || || ||||| || || || || Sbjct: 48079 agatccatacagggtcgccaaatacaatcgctgcacatcacccttccttgataatgatgc 48020 Query: 374 cgaagcagttcgggaggatgatgggctcaagttggaaattgctgaa 419 | ||| ||||| ||||||| || ||| |||||||| ||||||||| Sbjct: 48019 tgcagcggttcgagaggatgctgagcttaagttggagattgctgaa 47974
>gb|BT014124.1| Lycopersicon esculentum clone 133232R, mRNA sequence Length = 1448 Score = 71.9 bits (36), Expect = 2e-09 Identities = 153/192 (79%) Strand = Plus / Plus Query: 437 tgagagagcccaggctctgattcatggggatctccatactggttccatcatggtgacccc 496 |||||||||||| ||||| || ||||| ||||| ||||||||||| | ||||| || | Sbjct: 698 tgagagagcccaagctcttatacatggtgatcttcatactggttctttgatggtcactca 757 Query: 497 agattccactcaagtgatcgatccagagtttgccttctacgcgccgatgggttacgacat 556 |||||| || ||||| || || ||||| ||| | ||||| | ||| ||||||| || || Sbjct: 758 agattcaacccaagtaattgacccagaattttctttctatgggccaatgggttttgatat 817 Query: 557 tggggctttcttggggaacctgattctggcgtactttgcacaggatgggcatgctgatca 616 ||| || | | ||||| |||||||||||||||||| | || ||||| ||||| ||||| Sbjct: 818 tggagcatatattgggaatctgattctggcgtacttttcccaagatggacatgcagatca 877 Query: 617 agcaaatgaccg 628 || |||||||| Sbjct: 878 ggccaatgaccg 889
>ref|NM_103869.1| Arabidopsis thaliana S-methyl-5-thioribose kinase AT1G49820 mRNA, complete cds Length = 1527 Score = 60.0 bits (30), Expect = 9e-06 Identities = 87/106 (82%) Strand = Plus / Plus Query: 459 catggggatctccatactggttccatcatggtgaccccagattccactcaagtgatcgat 518 ||||| ||||| ||||||||||| ||||||| || | |||||| || ||||| || ||| Sbjct: 779 catggtgatcttcatactggttctgtcatggttactcaagattcaacgcaagttatagat 838 Query: 519 ccagagtttgccttctacgcgccgatgggttacgacattggggctt 564 ||||||||| | ||||| | |||||||||| ||| ||||| |||| Sbjct: 839 ccagagttttcgttctatggaccgatgggtttcgatattggcgctt 884 Score = 42.1 bits (21), Expect = 2.2 Identities = 51/61 (83%) Strand = Plus / Plus Query: 166 tcctcgcccaccacatggccgactacatggccaacaccctcttcttcacctccctcctct 225 ||||||| |||||||| | || |||||||| || || ||||||||||| || ||||||| Sbjct: 486 tcctcgcagaccacatgtctgattacatggcgaagactctcttcttcacttctctcctct 545 Query: 226 a 226 | Sbjct: 546 a 546
>gb|AY090315.1| Arabidopsis thaliana At1g49820/F10F5_1 mRNA, complete cds Length = 1263 Score = 60.0 bits (30), Expect = 9e-06 Identities = 87/106 (82%) Strand = Plus / Plus Query: 459 catggggatctccatactggttccatcatggtgaccccagattccactcaagtgatcgat 518 ||||| ||||| ||||||||||| ||||||| || | |||||| || ||||| || ||| Sbjct: 706 catggtgatcttcatactggttctgtcatggttactcaagattcaacgcaagttatagat 765 Query: 519 ccagagtttgccttctacgcgccgatgggttacgacattggggctt 564 ||||||||| | ||||| | |||||||||| ||| ||||| |||| Sbjct: 766 ccagagttttcgttctatggaccgatgggtttcgatattggcgctt 811 Score = 42.1 bits (21), Expect = 2.2 Identities = 51/61 (83%) Strand = Plus / Plus Query: 166 tcctcgcccaccacatggccgactacatggccaacaccctcttcttcacctccctcctct 225 ||||||| |||||||| | || |||||||| || || ||||||||||| || ||||||| Sbjct: 413 tcctcgcagaccacatgtctgattacatggcgaagactctcttcttcacttctctcctct 472 Query: 226 a 226 | Sbjct: 473 a 473
>gb|AY057512.1| Arabidopsis thaliana At1g49820/F10F5_1 mRNA, complete cds Length = 1529 Score = 60.0 bits (30), Expect = 9e-06 Identities = 87/106 (82%) Strand = Plus / Plus Query: 459 catggggatctccatactggttccatcatggtgaccccagattccactcaagtgatcgat 518 ||||| ||||| ||||||||||| ||||||| || | |||||| || ||||| || ||| Sbjct: 779 catggtgatcttcatactggttctgtcatggttactcaagattcaacgcaagttatagat 838 Query: 519 ccagagtttgccttctacgcgccgatgggttacgacattggggctt 564 ||||||||| | ||||| | |||||||||| ||| ||||| |||| Sbjct: 839 ccagagttttcgttctatggaccgatgggtttcgatattggcgctt 884 Score = 42.1 bits (21), Expect = 2.2 Identities = 51/61 (83%) Strand = Plus / Plus Query: 166 tcctcgcccaccacatggccgactacatggccaacaccctcttcttcacctccctcctct 225 ||||||| |||||||| | || |||||||| || || ||||||||||| || ||||||| Sbjct: 486 tcctcgcagaccacatgtctgattacatggcgaagactctcttcttcacttctctcctct 545 Query: 226 a 226 | Sbjct: 546 a 546
>emb|BX815563.1|CNS0ABJH Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS71ZF02 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1468 Score = 60.0 bits (30), Expect = 9e-06 Identities = 87/106 (82%) Strand = Plus / Plus Query: 459 catggggatctccatactggttccatcatggtgaccccagattccactcaagtgatcgat 518 ||||| ||||| ||||||||||| ||||||| || | |||||| || ||||| || ||| Sbjct: 764 catggtgatcttcatactggttctgtcatggttactcaagattcaacgcaagttatagat 823 Query: 519 ccagagtttgccttctacgcgccgatgggttacgacattggggctt 564 ||||||||| | ||||| | |||||||||| ||| ||||| |||| Sbjct: 824 ccagagttttcgttctatggaccgatgggtttcgatattggcgctt 869 Score = 42.1 bits (21), Expect = 2.2 Identities = 51/61 (83%) Strand = Plus / Plus Query: 166 tcctcgcccaccacatggccgactacatggccaacaccctcttcttcacctccctcctct 225 ||||||| |||||||| | || |||||||| || || ||||||||||| || ||||||| Sbjct: 471 tcctcgcagaccacatgtctgattacatggcgaagactctcttcttcacttctctcctct 530 Query: 226 a 226 | Sbjct: 531 a 531
>gb|AC079674.4|AC079674 Arabidopsis thaliana chromosome 1 BAC F10F5 genomic sequence, complete sequence Length = 48940 Score = 60.0 bits (30), Expect = 9e-06 Identities = 87/106 (82%) Strand = Plus / Plus Query: 459 catggggatctccatactggttccatcatggtgaccccagattccactcaagtgatcgat 518 ||||| ||||| ||||||||||| ||||||| || | |||||| || ||||| || ||| Sbjct: 12497 catggtgatcttcatactggttctgtcatggttactcaagattcaacgcaagttatagat 12556 Query: 519 ccagagtttgccttctacgcgccgatgggttacgacattggggctt 564 ||||||||| | ||||| | |||||||||| ||| ||||| |||| Sbjct: 12557 ccagagttttcgttctatggaccgatgggtttcgatattggcgctt 12602 Score = 42.1 bits (21), Expect = 2.2 Identities = 51/61 (83%) Strand = Plus / Plus Query: 166 tcctcgcccaccacatggccgactacatggccaacaccctcttcttcacctccctcctct 225 ||||||| |||||||| | || |||||||| || || ||||||||||| || ||||||| Sbjct: 12042 tcctcgcagaccacatgtctgattacatggcgaagactctcttcttcacttctctcctct 12101 Query: 226 a 226 | Sbjct: 12102 a 12102
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Plus Query: 470 ccatactggttccatcatggtgacc 494 ||||||||||||||||||||||||| Sbjct: 16019428 ccatactggttccatcatggtgacc 16019452
>dbj|AP005833.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1328_D07 Length = 155007 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Plus Query: 470 ccatactggttccatcatggtgacc 494 ||||||||||||||||||||||||| Sbjct: 19641 ccatactggttccatcatggtgacc 19665
>gb|AC006064.10| Homo sapiens 12 PAC RP5-940J5 (Roswell Park Cancer Institute Human PAC Library) complete sequence Length = 172571 Score = 44.1 bits (22), Expect = 0.55 Identities = 25/26 (96%) Strand = Plus / Plus Query: 11 ggcgtcggcgctgcgggagcacggcc 36 |||||||| ||||||||||||||||| Sbjct: 105712 ggcgtcggtgctgcgggagcacggcc 105737
>dbj|AP006430.1| Lotus japonicus genomic DNA, chromosome 5, clone:LjT33L13, TM0327, complete sequence Length = 105384 Score = 44.1 bits (22), Expect = 0.55 Identities = 25/26 (96%) Strand = Plus / Minus Query: 600 gatgggcatgctgatcaagcaaatga 625 ||||| |||||||||||||||||||| Sbjct: 45410 gatggacatgctgatcaagcaaatga 45385
>gb|AC160765.4| Mus musculus BAC clone RP23-26O24 from chromosome 13, complete sequence Length = 234761 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 283 tgtgcaggctcacggagcagg 303 ||||||||||||||||||||| Sbjct: 223940 tgtgcaggctcacggagcagg 223920
>emb|CR954256.1| Anopheles gambiae Pen-1 region; BAC clones 30N20, 10K02, 13E09, 31J16 and 01G10 from library NotreDame1 of Anopheles gambiae (African malaria mosquito) strain PEST Length = 447895 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 119 ccacatcatcctccgcaaggg 139 ||||||||||||||||||||| Sbjct: 234632 ccacatcatcctccgcaaggg 234652
>emb|AJ132005.2|SPC33132 Synechococcus PCC7942 clpP3 gene for ATP-dependent Clp protease third proteolytic subunit and clpR gene for ATP-dependent Clp protease proteolytic subunit Length = 2100 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 98 gatgcgctacatcaagccgcc 118 ||||||||||||||||||||| Sbjct: 449 gatgcgctacatcaagccgcc 469
>dbj|AP008231.1| Synechococcus elongatus PCC 6301 DNA, complete genome Length = 2696255 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 98 gatgcgctacatcaagccgcc 118 ||||||||||||||||||||| Sbjct: 1696137 gatgcgctacatcaagccgcc 1696157
>gb|AC160052.2| Mus musculus BAC clone RP24-173L14 from chromosome 9, complete sequence Length = 154436 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 401 caagttggaaattgctgaact 421 ||||||||||||||||||||| Sbjct: 52816 caagttggaaattgctgaact 52836
>gb|AF117343.1| Fundulus heteroclitus cytochrome P450 2P3 (CYP2P3) mRNA, complete cds Length = 1941 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 203 cctcttcttcacctccctcct 223 ||||||||||||||||||||| Sbjct: 1590 cctcttcttcacctccctcct 1610
>gb|AF117342.1| Fundulus heteroclitus cytochrome P450 2P2 (CYP2P2) mRNA, complete cds Length = 2142 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 203 cctcttcttcacctccctcct 223 ||||||||||||||||||||| Sbjct: 1403 cctcttcttcacctccctcct 1423
>gb|AF117341.1| Fundulus heteroclitus cytochrome P450 2P1 (CYP2P1) mRNA, complete cds Length = 1497 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 203 cctcttcttcacctccctcct 223 ||||||||||||||||||||| Sbjct: 1368 cctcttcttcacctccctcct 1388
>gb|AF045053.1|AF045053 Oncorhynchus mykiss cytochrome P450 monooxygenase CYP2K1v3 (CYP2K1v3) mRNA, complete cds Length = 1921 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 203 cctcttcttcacctccctcct 223 ||||||||||||||||||||| Sbjct: 1469 cctcttcttcacctccctcct 1489
>gb|AF045052.1|AF045052 Oncorhynchus mykiss cytochrome P450 monooxygenase CYP2K1v2 (CYP2K1v2) mRNA, complete cds Length = 1587 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 203 cctcttcttcacctccctcct 223 ||||||||||||||||||||| Sbjct: 1445 cctcttcttcacctccctcct 1465
>gb|AF043551.1|AF043551 Oncorhynchus mykiss cytochrome P450 monooxygenase (CYP2K3) mRNA, complete cds Length = 1914 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 203 cctcttcttcacctccctcct 223 ||||||||||||||||||||| Sbjct: 1412 cctcttcttcacctccctcct 1432
>gb|AF043296.1|AF043296 Oncorhynchus mykiss cytochrome P450 (CYP2K4) mRNA, complete cds Length = 2601 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 203 cctcttcttcacctccctcct 223 ||||||||||||||||||||| Sbjct: 1446 cctcttcttcacctccctcct 1466
>gb|L11528.1|ONHCYTOP Rainbow trout cytochrome P-450 (Cyp2K1) mRNA, complete cds Length = 1853 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 203 cctcttcttcacctccctcct 223 ||||||||||||||||||||| Sbjct: 1432 cctcttcttcacctccctcct 1452
>gb|CP000100.1| Synechococcus elongatus PCC 7942, complete genome Length = 2695903 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 98 gatgcgctacatcaagccgcc 118 ||||||||||||||||||||| Sbjct: 2620649 gatgcgctacatcaagccgcc 2620629
>gb|CP000081.1| Leishmania major chromosome 35, complete sequence Length = 2090491 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 6 ttcgaggcgtcggcgctgcg 25 |||||||||||||||||||| Sbjct: 1028635 ttcgaggcgtcggcgctgcg 1028654
>gb|AC103621.6| Mus musculus chromosome 5, clone RP24-230J14, complete sequence Length = 169247 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 438 gagagagcccaggctctgat 457 |||||||||||||||||||| Sbjct: 16905 gagagagcccaggctctgat 16924
>gb|AC117567.12| Mus musculus chromosome 16, clone RP24-380O24, complete sequence Length = 195972 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 231 tccaccacccaccacaagaa 250 |||||||||||||||||||| Sbjct: 100216 tccaccacccaccacaagaa 100235
>gb|AF359361.3| Gibberella zeae strain GZ3639 trichothecene gene cluster, complete sequence Length = 57840 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 81 gccatgtcgctcatcgggat 100 |||||||||||||||||||| Sbjct: 54595 gccatgtcgctcatcgggat 54576
>ref|XM_838258.1| Leishmania major strain Friedlin hypothetical protein (LMJ_1175) partial mRNA Length = 6936 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 6 ttcgaggcgtcggcgctgcg 25 |||||||||||||||||||| Sbjct: 4630 ttcgaggcgtcggcgctgcg 4649
>gb|BC107663.1| Rattus norvegicus ubiquitin-conjugating enzyme E2Z (putative), mRNA (cDNA clone MGC:124852 IMAGE:7936709), complete cds Length = 2788 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 196 ccaacaccctcttcttcacctccc 219 ||||||||||||||||| |||||| Sbjct: 1577 ccaacaccctcttcttcccctccc 1600
>ref|XM_531935.2| PREDICTED: Canis familiaris similar to multiple PDZ domain protein (LOC474708), mRNA Length = 7602 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 266 ctgcgagaacgtggagatgt 285 |||||||||||||||||||| Sbjct: 193 ctgcgagaacgtggagatgt 212
>ref|NM_001037643.1| Rattus norvegicus ubiquitin-conjugating enzyme E2Z (putative) (Ube2z), mRNA Length = 2788 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 196 ccaacaccctcttcttcacctccc 219 ||||||||||||||||| |||||| Sbjct: 1577 ccaacaccctcttcttcccctccc 1600
>gb|AC138015.24| Medicago truncatula clone mth2-34m6, complete sequence Length = 126845 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 200 caccctcttcttcacctccctcct 223 |||||||||||||| ||||||||| Sbjct: 63348 caccctcttcttcatctccctcct 63325
>emb|AL117328.5|HSA494O16 Human DNA sequence from clone RP11-494O16 on chromosome 22, complete sequence Length = 50502 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 30 cacggccgcctctgcccgga 49 |||||||||||||||||||| Sbjct: 9846 cacggccgcctctgcccgga 9827
>gb|AC143337.27| Medicago truncatula clone mth2-35d19, complete sequence Length = 118139 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 200 caccctcttcttcacctccctcct 223 |||||||||||||| ||||||||| Sbjct: 71573 caccctcttcttcatctccctcct 71596
>ref|XM_684956.1| PREDICTED: Danio rerio similar to synaptotagmin XIV (LOC561547), mRNA Length = 1929 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 219 ctcctctacaactccaccac 238 |||||||||||||||||||| Sbjct: 1525 ctcctctacaactccaccac 1544
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 352 cgccgttcctcgacaaggac 371 |||||||||||||||||||| Sbjct: 7980374 cgccgttcctcgacaaggac 7980393
>emb|AJ335995.1|HSA335995 Homo sapiens genomic sequence surrounding NotI site, clone NR3-BN18C Length = 714 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 32 cggccgcctctgcccggacc 51 |||||||||||||||||||| Sbjct: 236 cggccgcctctgcccggacc 255
>emb|BX942841.12| Zebrafish DNA sequence from clone CH211-59D15 in linkage group 20, complete sequence Length = 202032 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 219 ctcctctacaactccaccac 238 |||||||||||||||||||| Sbjct: 51241 ctcctctacaactccaccac 51260
>emb|AL845274.17| Mouse DNA sequence from clone RP23-146F24 on chromosome 2, complete sequence Length = 230151 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 205 tcttcttcacctccctcctc 224 |||||||||||||||||||| Sbjct: 47899 tcttcttcacctccctcctc 47880 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,640,170 Number of Sequences: 3902068 Number of extensions: 4640170 Number of successful extensions: 88885 Number of sequences better than 10.0: 48 Number of HSP's better than 10.0 without gapping: 48 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 88578 Number of HSP's gapped (non-prelim): 303 length of query: 630 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 607 effective length of database: 17,143,297,704 effective search space: 10405981706328 effective search space used: 10405981706328 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)