ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baala24 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_478424.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2115 Score = 291 bits (147), Expect = 1e-75 Identities = 234/263 (88%) Strand = Plus / Plus Query: 74 gaggggagcacgagcgggggcaggttcccgatactgcaggcgaaccgggacccggagtcg 133 ||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||| Sbjct: 40 gaggggagcacgagcggggcgaggttcccgatcctgcaggcgaaccgggacccggagtcg 99 Query: 134 aactgggaggtggacgtcgccaagagcctcgaggagtatctcctcaagatctgctcaggc 193 ||||||||||||||||| |||||||||||||||||||| ||||||| ||||||||| || Sbjct: 100 aactgggaggtggacgtggccaagagcctcgaggagtacctcctcaggatctgctccggg 159 Query: 194 gagatctccgccgaagacggggcccacagcttcaacttcgccgaagctgccctattgctc 253 |||||| || ||| ||||||||||| | ||||||||||||||||||| ||| | || Sbjct: 160 gagatcagcggcgaggacggggcccattccgtcaacttcgccgaagctgcactactactg 219 Query: 254 caaggatcagttcaagtttacagccgcaaggtggagtacttgtactcattggtgctacat 313 || |||||||| || ||||||||||||||||||||||| |||||| | |||||||| | Sbjct: 220 cagggatcagtccaggtttacagccgcaaggtggagtatttgtacaccttggtgctcaac 279 Query: 314 gcgctggaatttctctcgcaaaa 336 ||||||||||||||||||||||| Sbjct: 280 gcgctggaatttctctcgcaaaa 302 Score = 91.7 bits (46), Expect = 3e-15 Identities = 82/94 (87%) Strand = Plus / Plus Query: 429 tagatgatgtcccaggggaaacaaggaccaccttggataacaatcttgaccgggatgatc 488 ||||||||||||||| |||| |||||||||| |||||||||||| |||| || ||||| Sbjct: 515 tagatgatgtcccagtggaagcaaggaccactttggataacaatattgatcgagatgact 574 Query: 489 tgcatagaaaaattgtgaggccaccagcaaatct 522 ||| | ||||| ||||||||||||||||||||| Sbjct: 575 tgctaaaaaaaaatgtgaggccaccagcaaatct 608
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 202 bits (102), Expect = 1e-48 Identities = 150/166 (90%) Strand = Plus / Plus Query: 74 gaggggagcacgagcgggggcaggttcccgatactgcaggcgaaccgggacccggagtcg 133 ||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||| Sbjct: 19885079 gaggggagcacgagcggggcgaggttcccgatcctgcaggcgaaccgggacccggagtcg 19885138 Query: 134 aactgggaggtggacgtcgccaagagcctcgaggagtatctcctcaagatctgctcaggc 193 ||||||||||||||||| |||||||||||||||||||| ||||||| ||||||||| || Sbjct: 19885139 aactgggaggtggacgtggccaagagcctcgaggagtacctcctcaggatctgctccggg 19885198 Query: 194 gagatctccgccgaagacggggcccacagcttcaacttcgccgaag 239 |||||| || ||| ||||||||||| | ||||||||||||||| Sbjct: 19885199 gagatcagcggcgaggacggggcccattccgtcaacttcgccgaag 19885244 Score = 111 bits (56), Expect = 3e-21 Identities = 110/128 (85%) Strand = Plus / Plus Query: 440 ccaggggaaacaaggaccaccttggataacaatcttgaccgggatgatctgcatagaaaa 499 |||| |||| |||||||||| |||||||||||| |||| || ||||| ||| | |||| Sbjct: 19886855 ccagtggaagcaaggaccactttggataacaatattgatcgagatgacttgctaaaaaaa 19886914 Query: 500 attgtgaggccaccagcaaatcttatggtgtttgaaggagactgtgtcgatagcgaagca 559 | ||||||||||||||||||||| |||||||||||||||||||| | ||||||||||| Sbjct: 19886915 aatgtgaggccaccagcaaatctgctggtgtttgaaggagactgtatggatagcgaagcg 19886974 Query: 560 agcgagct 567 || ||||| Sbjct: 19886975 agtgagct 19886982 Score = 95.6 bits (48), Expect = 2e-16 Identities = 72/80 (90%) Strand = Plus / Plus Query: 257 ggatcagttcaagtttacagccgcaaggtggagtacttgtactcattggtgctacatgcg 316 |||||||| || ||||||||||||||||||||||| |||||| | |||||||| | ||| Sbjct: 19885571 ggatcagtccaggtttacagccgcaaggtggagtatttgtacaccttggtgctcaacgcg 19885630 Query: 317 ctggaatttctctcgcaaaa 336 |||||||||||||||||||| Sbjct: 19885631 ctggaatttctctcgcaaaa 19885650 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 46 ggaggacggcagcggcggcg 65 |||||||||||||||||||| Sbjct: 24462826 ggaggacggcagcggcggcg 24462807
>dbj|AP005103.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0036M16 Length = 158880 Score = 202 bits (102), Expect = 1e-48 Identities = 150/166 (90%) Strand = Plus / Plus Query: 74 gaggggagcacgagcgggggcaggttcccgatactgcaggcgaaccgggacccggagtcg 133 ||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||| Sbjct: 49729 gaggggagcacgagcggggcgaggttcccgatcctgcaggcgaaccgggacccggagtcg 49788 Query: 134 aactgggaggtggacgtcgccaagagcctcgaggagtatctcctcaagatctgctcaggc 193 ||||||||||||||||| |||||||||||||||||||| ||||||| ||||||||| || Sbjct: 49789 aactgggaggtggacgtggccaagagcctcgaggagtacctcctcaggatctgctccggg 49848 Query: 194 gagatctccgccgaagacggggcccacagcttcaacttcgccgaag 239 |||||| || ||| ||||||||||| | ||||||||||||||| Sbjct: 49849 gagatcagcggcgaggacggggcccattccgtcaacttcgccgaag 49894 Score = 111 bits (56), Expect = 3e-21 Identities = 110/128 (85%) Strand = Plus / Plus Query: 440 ccaggggaaacaaggaccaccttggataacaatcttgaccgggatgatctgcatagaaaa 499 |||| |||| |||||||||| |||||||||||| |||| || ||||| ||| | |||| Sbjct: 51505 ccagtggaagcaaggaccactttggataacaatattgatcgagatgacttgctaaaaaaa 51564 Query: 500 attgtgaggccaccagcaaatcttatggtgtttgaaggagactgtgtcgatagcgaagca 559 | ||||||||||||||||||||| |||||||||||||||||||| | ||||||||||| Sbjct: 51565 aatgtgaggccaccagcaaatctgctggtgtttgaaggagactgtatggatagcgaagcg 51624 Query: 560 agcgagct 567 || ||||| Sbjct: 51625 agtgagct 51632 Score = 95.6 bits (48), Expect = 2e-16 Identities = 72/80 (90%) Strand = Plus / Plus Query: 257 ggatcagttcaagtttacagccgcaaggtggagtacttgtactcattggtgctacatgcg 316 |||||||| || ||||||||||||||||||||||| |||||| | |||||||| | ||| Sbjct: 50221 ggatcagtccaggtttacagccgcaaggtggagtatttgtacaccttggtgctcaacgcg 50280 Query: 317 ctggaatttctctcgcaaaa 336 |||||||||||||||||||| Sbjct: 50281 ctggaatttctctcgcaaaa 50300
>dbj|AP005320.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0650C03 Length = 144337 Score = 202 bits (102), Expect = 1e-48 Identities = 150/166 (90%) Strand = Plus / Plus Query: 74 gaggggagcacgagcgggggcaggttcccgatactgcaggcgaaccgggacccggagtcg 133 ||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||| Sbjct: 125238 gaggggagcacgagcggggcgaggttcccgatcctgcaggcgaaccgggacccggagtcg 125297 Query: 134 aactgggaggtggacgtcgccaagagcctcgaggagtatctcctcaagatctgctcaggc 193 ||||||||||||||||| |||||||||||||||||||| ||||||| ||||||||| || Sbjct: 125298 aactgggaggtggacgtggccaagagcctcgaggagtacctcctcaggatctgctccggg 125357 Query: 194 gagatctccgccgaagacggggcccacagcttcaacttcgccgaag 239 |||||| || ||| ||||||||||| | ||||||||||||||| Sbjct: 125358 gagatcagcggcgaggacggggcccattccgtcaacttcgccgaag 125403 Score = 111 bits (56), Expect = 3e-21 Identities = 110/128 (85%) Strand = Plus / Plus Query: 440 ccaggggaaacaaggaccaccttggataacaatcttgaccgggatgatctgcatagaaaa 499 |||| |||| |||||||||| |||||||||||| |||| || ||||| ||| | |||| Sbjct: 127014 ccagtggaagcaaggaccactttggataacaatattgatcgagatgacttgctaaaaaaa 127073 Query: 500 attgtgaggccaccagcaaatcttatggtgtttgaaggagactgtgtcgatagcgaagca 559 | ||||||||||||||||||||| |||||||||||||||||||| | ||||||||||| Sbjct: 127074 aatgtgaggccaccagcaaatctgctggtgtttgaaggagactgtatggatagcgaagcg 127133 Query: 560 agcgagct 567 || ||||| Sbjct: 127134 agtgagct 127141 Score = 95.6 bits (48), Expect = 2e-16 Identities = 72/80 (90%) Strand = Plus / Plus Query: 257 ggatcagttcaagtttacagccgcaaggtggagtacttgtactcattggtgctacatgcg 316 |||||||| || ||||||||||||||||||||||| |||||| | |||||||| | ||| Sbjct: 125730 ggatcagtccaggtttacagccgcaaggtggagtatttgtacaccttggtgctcaacgcg 125789 Query: 317 ctggaatttctctcgcaaaa 336 |||||||||||||||||||| Sbjct: 125790 ctggaatttctctcgcaaaa 125809
>dbj|AK121812.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033098C24, full insert sequence Length = 2185 Score = 155 bits (78), Expect = 2e-34 Identities = 156/182 (85%) Strand = Plus / Plus Query: 167 gagtatctcctcaagatctgctcaggcgagatctccgccgaagacggggcccacagcttc 226 ||||| ||||||| ||||||||| || |||||| || ||| ||||||||||| | || Sbjct: 1 gagtacctcctcaggatctgctccggggagatcagcggcgaggacggggcccattccgtc 60 Query: 227 aacttcgccgaagctgccctattgctccaaggatcagttcaagtttacagccgcaaggtg 286 ||||||||||||||||| ||| | || || |||||||| || |||||||||||||||||| Sbjct: 61 aacttcgccgaagctgcactactactgcagggatcagtccaggtttacagccgcaaggtg 120 Query: 287 gagtacttgtactcattggtgctacatgcgctggaatttctctcgcaaaataagcaagat 346 ||||| |||||| | |||||||| | ||||||||||||||||||||||| ||||||||| Sbjct: 121 gagtatttgtacaccttggtgctcaacgcgctggaatttctctcgcaaaagaagcaagat 180 Query: 347 ca 348 || Sbjct: 181 ca 182 Score = 151 bits (76), Expect = 3e-33 Identities = 147/168 (87%), Gaps = 2/168 (1%) Strand = Plus / Plus Query: 429 tagatgatgtcccaggggaaacaaggaccaccttggataacaatcttgaccgggatgatc 488 ||||||||||||||| |||| |||||||||| |||||||||||| |||| || ||||| Sbjct: 260 tagatgatgtcccagtggaagcaaggaccactttggataacaatattgatcgagatgact 319 Query: 489 tgc-atagaaaaattgtgaggccaccagcaaatcttatggtgtttgaaggagactgtgtc 547 ||| | | ||||| ||||||||||||||||||||| |||||||||||||||||||| | Sbjct: 320 tgctaaaaaaaaaatgtgaggccaccagcaaatctgctggtgtttgaaggagactgtatg 379 Query: 548 gatagcgaagcaagcgagctgggattcatatttgttagcaacatgtgg 595 ||||||||||| || ||||| | ||| ||||||||||||||||||||| Sbjct: 380 gatagcgaagcgagtgagctagaatt-atatttgttagcaacatgtgg 426
>ref|NM_190949.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1086 Score = 48.1 bits (24), Expect = 0.034 Identities = 30/32 (93%) Strand = Plus / Plus Query: 48 aggacggcagcggcggcgctggcggcgagggg 79 |||| ||| ||||||||||||||||||||||| Sbjct: 14 aggagggcggcggcggcgctggcggcgagggg 45
>gb|AC136219.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0073E05, complete sequence Length = 178013 Score = 48.1 bits (24), Expect = 0.034 Identities = 30/32 (93%) Strand = Plus / Plus Query: 43 catggaggacggcagcggcggcgctggcggcg 74 ||||||||||||| ||||||||| |||||||| Sbjct: 100949 catggaggacggcggcggcggcggtggcggcg 100980
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 48.1 bits (24), Expect = 0.034 Identities = 30/32 (93%) Strand = Plus / Plus Query: 43 catggaggacggcagcggcggcgctggcggcg 74 ||||||||||||| ||||||||| |||||||| Sbjct: 18627834 catggaggacggcggcggcggcggtggcggcg 18627865 Score = 44.1 bits (22), Expect = 0.53 Identities = 28/30 (93%) Strand = Plus / Plus Query: 57 gcggcggcgctggcggcgaggggagcacga 86 |||||||||||||||||| | ||||||||| Sbjct: 28432013 gcggcggcgctggcggcgcgcggagcacga 28432042
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 48.1 bits (24), Expect = 0.034 Identities = 30/32 (93%) Strand = Plus / Plus Query: 57 gcggcggcgctggcggcgaggggagcacgagc 88 ||||||||| ||||||||||||||||||||| Sbjct: 35758367 gcggcggcggcggcggcgaggggagcacgagc 35758398 Score = 48.1 bits (24), Expect = 0.034 Identities = 30/32 (93%) Strand = Plus / Minus Query: 48 aggacggcagcggcggcgctggcggcgagggg 79 |||| ||| ||||||||||||||||||||||| Sbjct: 34012205 aggagggcggcggcggcgctggcggcgagggg 34012174 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 57 gcggcggcgctggcggcgag 76 |||||||||||||||||||| Sbjct: 35684927 gcggcggcgctggcggcgag 35684946 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 52 cggcagcggcggcgctggcg 71 |||||||||||||||||||| Sbjct: 9679072 cggcagcggcggcgctggcg 9679091
>dbj|AP003232.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0034E02 Length = 165497 Score = 48.1 bits (24), Expect = 0.034 Identities = 30/32 (93%) Strand = Plus / Minus Query: 48 aggacggcagcggcggcgctggcggcgagggg 79 |||| ||| ||||||||||||||||||||||| Sbjct: 8683 aggagggcggcggcggcgctggcggcgagggg 8652
>dbj|AP004366.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0460C04 Length = 189043 Score = 48.1 bits (24), Expect = 0.034 Identities = 30/32 (93%) Strand = Plus / Plus Query: 57 gcggcggcgctggcggcgaggggagcacgagc 88 ||||||||| ||||||||||||||||||||| Sbjct: 161704 gcggcggcggcggcggcgaggggagcacgagc 161735 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 57 gcggcggcgctggcggcgag 76 |||||||||||||||||||| Sbjct: 88264 gcggcggcgctggcggcgag 88283
>dbj|AP003271.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0506B12 Length = 170759 Score = 48.1 bits (24), Expect = 0.034 Identities = 30/32 (93%) Strand = Plus / Plus Query: 57 gcggcggcgctggcggcgaggggagcacgagc 88 ||||||||| ||||||||||||||||||||| Sbjct: 22825 gcggcggcggcggcggcgaggggagcacgagc 22856
>dbj|AP003221.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0003D09 Length = 161970 Score = 48.1 bits (24), Expect = 0.034 Identities = 30/32 (93%) Strand = Plus / Minus Query: 48 aggacggcagcggcggcgctggcggcgagggg 79 |||| ||| ||||||||||||||||||||||| Sbjct: 143648 aggagggcggcggcggcgctggcggcgagggg 143617
>dbj|AK062285.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-100-D04, full insert sequence Length = 880 Score = 48.1 bits (24), Expect = 0.034 Identities = 30/32 (93%) Strand = Plus / Minus Query: 43 catggaggacggcagcggcggcgctggcggcg 74 ||||||||||||| ||||||||| |||||||| Sbjct: 35 catggaggacggcggcggcggcggtggcggcg 4
>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome Length = 4109442 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 52 cggcagcggcggcgctggcggcg 74 ||||||||||||||||||||||| Sbjct: 1494434 cggcagcggcggcgctggcggcg 1494456
>emb|Z78205.1|BHT1UL Bovine herpesvirus type 1 UL22-35 genes Length = 37000 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 52 cggcagcggcggcgctggcggcg 74 ||||||||||||||||||||||| Sbjct: 23096 cggcagcggcggcgctggcggcg 23118
>emb|AJ004801.1|BHV1CGEN Bovine herpesvirus type 1.1 complete genome Length = 135301 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 52 cggcagcggcggcgctggcggcg 74 ||||||||||||||||||||||| Sbjct: 53896 cggcagcggcggcgctggcggcg 53918
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 55 cagcggcggcgctggcggcgaggggag 81 ||||||||||| ||||||||||||||| Sbjct: 13112446 cagcggcggcggtggcggcgaggggag 13112472 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 45 tggaggacggcagcggcggc 64 |||||||||||||||||||| Sbjct: 12290805 tggaggacggcagcggcggc 12290786 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 57 gcggcggcgctggcggcgag 76 |||||||||||||||||||| Sbjct: 4970183 gcggcggcgctggcggcgag 4970164
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 46.1 bits (23), Expect = 0.13 Identities = 29/31 (93%) Strand = Plus / Minus Query: 52 cggcagcggcggcgctggcggcgaggggagc 82 |||||||||||||| ||||||||||||||| Sbjct: 2404521 cggcagcggcggcggcggcggcgaggggagc 2404491 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 56 agcggcggcgctggcggcgag 76 ||||||||||||||||||||| Sbjct: 17892771 agcggcggcgctggcggcgag 17892751 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 46 ggaggacggcagcggcggcg 65 |||||||||||||||||||| Sbjct: 8642142 ggaggacggcagcggcggcg 8642123
>dbj|AP003767.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0036F10 Length = 149415 Score = 46.1 bits (23), Expect = 0.13 Identities = 29/31 (93%) Strand = Plus / Minus Query: 52 cggcagcggcggcgctggcggcgaggggagc 82 |||||||||||||| ||||||||||||||| Sbjct: 35979 cggcagcggcggcggcggcggcgaggggagc 35949
>dbj|AP003487.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0007O20 Length = 147363 Score = 46.1 bits (23), Expect = 0.13 Identities = 29/31 (93%) Strand = Plus / Minus Query: 52 cggcagcggcggcgctggcggcgaggggagc 82 |||||||||||||| ||||||||||||||| Sbjct: 126322 cggcagcggcggcggcggcggcgaggggagc 126292
>dbj|AP005728.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0048A13 Length = 137680 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 55 cagcggcggcgctggcggcgaggggag 81 ||||||||||| ||||||||||||||| Sbjct: 34536 cagcggcggcggtggcggcgaggggag 34562
>emb|X94677.1|BHV1ULGNS Bovine herpesvirus type 1 genes for UL[27,28,29,30,31] Length = 10500 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 52 cggcagcggcggcgctggcggcg 74 ||||||||||||||||||||||| Sbjct: 8820 cggcagcggcggcgctggcggcg 8842
>gb|M23557.1|MSGPALCG Plasmid pAL5000 (from Mycobacterium fortuitum) complete genome Length = 4837 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 52 cggcagcggcggcgctggcggcg 74 ||||||||||||||||||||||| Sbjct: 2688 cggcagcggcggcgctggcggcg 2710
>gb|M60875.1|MSGORF Mycobacterium fortuitum DNA sequence, ORFs 1 and 2 Length = 4821 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 52 cggcagcggcggcgctggcggcg 74 ||||||||||||||||||||||| Sbjct: 2677 cggcagcggcggcgctggcggcg 2699
>ref|XM_475920.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 477 Score = 44.1 bits (22), Expect = 0.53 Identities = 28/30 (93%) Strand = Plus / Plus Query: 57 gcggcggcgctggcggcgaggggagcacga 86 |||||||||||||||||| | ||||||||| Sbjct: 116 gcggcggcgctggcggcgcgcggagcacga 145
>gb|AC098832.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1268_B08, complete sequence Length = 119500 Score = 44.1 bits (22), Expect = 0.53 Identities = 28/30 (93%) Strand = Plus / Plus Query: 57 gcggcggcgctggcggcgaggggagcacga 86 |||||||||||||||||| | ||||||||| Sbjct: 66937 gcggcggcgctggcggcgcgcggagcacga 66966
>gb|BC030758.1| Homo sapiens hypothetical protein LOC128977, mRNA (cDNA clone IMAGE:4797610) Length = 1023 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Plus Query: 36 gcggagtcatggaggacggcagcggc 61 |||||||||||| ||||||||||||| Sbjct: 2 gcggagtcatggcggacggcagcggc 27
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence Length = 3716413 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Plus Query: 53 ggcagcggcggcgctggcggcg 74 |||||||||||||||||||||| Sbjct: 2067080 ggcagcggcggcgctggcggcg 2067101
>gb|AY104635.1| Zea mays PCO115798 mRNA sequence Length = 1324 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Plus Query: 49 ggacggcagcggcggcgctggcggcg 74 ||||||| |||||||||||||||||| Sbjct: 115 ggacggcggcggcggcgctggcggcg 140
>dbj|AP007294.1| Lotus japonicus genomic DNA, clone:LjT42E17, TM0355, complete sequence Length = 124602 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Minus Query: 53 ggcagcggcggcgctggcggcg 74 |||||||||||||||||||||| Sbjct: 50573 ggcagcggcggcgctggcggcg 50552
>ref|NM_130134.2| Arabidopsis thaliana structural constituent of ribosome AT2G45710 mRNA, complete cds Length = 545 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 368 gaagctaacgaaaatggtcct 388 ||||||||||||||||||||| Sbjct: 70 gaagctaacgaaaatggtcct 90
>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome Length = 4403837 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 52 cggcagcggcggcgctggcgg 72 ||||||||||||||||||||| Sbjct: 3933591 cggcagcggcggcgctggcgg 3933611 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 52 cggcagcggcggcgctggcggcga 75 ||||| |||||||||||||||||| Sbjct: 3937308 cggcaacggcggcgctggcggcga 3937331
>ref|XM_868005.1| PREDICTED: Bos taurus similar to zinc finger protein 654 (LOC616042), mRNA Length = 3279 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 50 gacggcagcggcggcgctggcggcg 74 |||||||| |||||||||||||||| Sbjct: 103 gacggcagaggcggcgctggcggcg 127
>ref|XM_987484.1| PREDICTED: Mus musculus similar to fibroblast growth factor receptor 2 (LOC671508), mRNA Length = 3579 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 57 gcggcggcgctggcggcgaggggag 81 |||||||||| |||||||||||||| Sbjct: 1039 gcggcggcgcgggcggcgaggggag 1063
>ref|XM_883448.1| Leishmania major strain Friedlin hypothetical protein (L3291.04) partial mRNA Length = 4698 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 52 cggcagcggcggcgctggcgg 72 ||||||||||||||||||||| Sbjct: 2535 cggcagcggcggcgctggcgg 2555
>emb|AL139794.3|LMFLCHR4B Leishmania major Friedlin chromosome 4, right end Length = 247462 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 52 cggcagcggcggcgctggcgg 72 ||||||||||||||||||||| Sbjct: 9172 cggcagcggcggcgctggcgg 9152
>gb|AC157606.5| Mus musculus chromosome 7, clone RP23-466J2, complete sequence Length = 174676 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 57 gcggcggcgctggcggcgaggggag 81 |||||||||| |||||||||||||| Sbjct: 44007 gcggcggcgcgggcggcgaggggag 43983
>emb|BX842583.1| Mycobacterium tuberculosis H37Rv complete genome; segment 12/13 Length = 349606 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 52 cggcagcggcggcgctggcgg 72 ||||||||||||||||||||| Sbjct: 123169 cggcagcggcggcgctggcgg 123189 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 52 cggcagcggcggcgctggcggcga 75 ||||| |||||||||||||||||| Sbjct: 126533 cggcaacggcggcgctggcggcga 126556
>emb|BX248346.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 13/14 Length = 316050 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 52 cggcagcggcggcgctggcgg 72 ||||||||||||||||||||| Sbjct: 133582 cggcagcggcggcgctggcgg 133602 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 52 cggcagcggcggcgctggcggcga 75 ||||| |||||||||||||||||| Sbjct: 137398 cggcaacggcggcgctggcggcga 137421
>gb|AC090433.10| Chlamydomonas reinhardtii clone cr-19b23, complete sequence Length = 118183 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 50 gacggcagcggcggcgctggcggcg 74 |||||||||||||||||||| |||| Sbjct: 26990 gacggcagcggcggcgctggtggcg 27014
>gb|AY072376.1| Arabidopsis thaliana putative ribosomal protein S27 (At2g45710) mRNA, complete cds Length = 485 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 368 gaagctaacgaaaatggtcct 388 ||||||||||||||||||||| Sbjct: 70 gaagctaacgaaaatggtcct 90
>emb|BX821607.1|CNS0A87H Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL57ZG10 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 491 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 368 gaagctaacgaaaatggtcct 388 ||||||||||||||||||||| Sbjct: 51 gaagctaacgaaaatggtcct 71
>emb|BX842073.1|CNS09Y9I Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL45ZE01 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 527 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 368 gaagctaacgaaaatggtcct 388 ||||||||||||||||||||| Sbjct: 56 gaagctaacgaaaatggtcct 76
>gb|AY085824.1| Arabidopsis thaliana clone 18662 mRNA, complete sequence Length = 509 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 368 gaagctaacgaaaatggtcct 388 ||||||||||||||||||||| Sbjct: 70 gaagctaacgaaaatggtcct 90
>dbj|AP003618.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0561B08 Length = 161083 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 56 agcggcggcgctggcggcgag 76 ||||||||||||||||||||| Sbjct: 97960 agcggcggcgctggcggcgag 97940
>emb|X66455.1|MMFGFR2 M.musculus promoter region of fibroblast growth factor receptor 2 gene Length = 1374 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 57 gcggcggcgctggcggcgaggggag 81 |||||||||| |||||||||||||| Sbjct: 885 gcggcggcgcgggcggcgaggggag 909
>ref|NM_188091.1| Oryza sativa (japonica cultivar-group), Ozsa8523 predicted mRNA Length = 774 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 52 cggcagcggcggcgctggcg 71 |||||||||||||||||||| Sbjct: 171 cggcagcggcggcgctggcg 190
>ref|XM_464882.1| Oryza sativa (japonica cultivar-group), mRNA Length = 273 Score = 40.1 bits (20), Expect = 8.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 50 gacggcagcggcggcgctggcggcgagg 77 |||||| ||||||||| ||||||||||| Sbjct: 186 gacggcggcggcggcgatggcggcgagg 213
>ref|XM_464880.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2599 Score = 40.1 bits (20), Expect = 8.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 50 gacggcagcggcggcgctggcggcgagg 77 |||||| ||||||||| ||||||||||| Sbjct: 73 gacggcggcggcggcgatggcggcgagg 46
>ref|XM_464881.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2368 Score = 40.1 bits (20), Expect = 8.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 50 gacggcagcggcggcgctggcggcgagg 77 |||||| ||||||||| ||||||||||| Sbjct: 116 gacggcggcggcggcgatggcggcgagg 89
>ref|XM_450698.1| Oryza sativa (japonica cultivar-group), mRNA Length = 681 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 45 tggaggacggcagcggcggc 64 |||||||||||||||||||| Sbjct: 209 tggaggacggcagcggcggc 228
>ref|XM_450369.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1785 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 57 gcggcggcgctggcggcgag 76 |||||||||||||||||||| Sbjct: 382 gcggcggcgctggcggcgag 401
>ref|NM_196934.1| Oryza sativa (japonica cultivar-group) putative protein kinase (OSJNBa0006L06.16), mRNA Length = 2823 Score = 40.1 bits (20), Expect = 8.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 50 gacggcagcggcggcgctggcggcgagg 77 |||||||||||||||| |||||||||| Sbjct: 2542 gacggcagcggcggcggcggcggcgagg 2569
>ref|NM_190464.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2010 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 57 gcggcggcgctggcggcgag 76 |||||||||||||||||||| Sbjct: 489 gcggcggcgctggcggcgag 470
>ref|XM_479045.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1162 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 46 ggaggacggcagcggcggcg 65 |||||||||||||||||||| Sbjct: 427 ggaggacggcagcggcggcg 446
>gb|AC108224.6| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0038F07, complete sequence Length = 175703 Score = 40.1 bits (20), Expect = 8.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 52 cggcagcggcggcgctggcggcgagggg 79 |||||||||||||| |||||||||||| Sbjct: 129884 cggcagcggcggcggcggcggcgagggg 129911
>gb|AY446569.1| Corythophora alta isolate Cal1202_3541 microsatellite GGA50-2#3 sequence Length = 150 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 403 caaagaagatgatatttgta 422 |||||||||||||||||||| Sbjct: 137 caaagaagatgatatttgta 118
>gb|AY446568.1| Corythophora alta isolate CalDucke186 microsatellite GGA50-2#3 sequence Length = 147 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 403 caaagaagatgatatttgta 422 |||||||||||||||||||| Sbjct: 134 caaagaagatgatatttgta 115
>gb|AY446567.1| Corythophora alta isolate Cal1202_2856 microsatellite GGA50-2#3 sequence Length = 147 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 403 caaagaagatgatatttgta 422 |||||||||||||||||||| Sbjct: 134 caaagaagatgatatttgta 115
>gb|AY446566.1| Corythophora alta isolate Cal41_3023 microsatellite GGA50-2#3 sequence Length = 147 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 403 caaagaagatgatatttgta 422 |||||||||||||||||||| Sbjct: 134 caaagaagatgatatttgta 115
>gb|AY446565.1| Corythophora alta isolate Cal1202_4844 microsatellite GGA50-2#3 sequence Length = 147 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 403 caaagaagatgatatttgta 422 |||||||||||||||||||| Sbjct: 134 caaagaagatgatatttgta 115
>gb|AY446564.1| Corythophora alta isolate Cal1202_5543 microsatellite GGA50-2#3 sequence Length = 138 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 403 caaagaagatgatatttgta 422 |||||||||||||||||||| Sbjct: 125 caaagaagatgatatttgta 106
>gb|AY446563.1| Corythophora alta isolate Cal1202_22 microsatellite GGA50-2#3 sequence Length = 138 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 403 caaagaagatgatatttgta 422 |||||||||||||||||||| Sbjct: 125 caaagaagatgatatttgta 106
>gb|AY446562.1| Corythophora alta isolate Cal1202_17 microsatellite GGA50-2#3 sequence Length = 138 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 403 caaagaagatgatatttgta 422 |||||||||||||||||||| Sbjct: 125 caaagaagatgatatttgta 106
>gb|AC093123.4| Papio anubis clone RP41-171O6, complete sequence Length = 172369 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 51 acggcagcggcggcgctggcggcg 74 ||||| |||||||||||||||||| Sbjct: 1776 acggcggcggcggcgctggcggcg 1753
>gb|AC005096.4| Homo sapiens BAC clone CTA-339C12 from 7, complete sequence Length = 185376 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 51 acggcagcggcggcgctggcggcg 74 ||||| |||||||||||||||||| Sbjct: 123893 acggcggcggcggcgctggcggcg 123870
>ref|XM_883495.1| Leishmania major strain Friedlin huntingtin-interacting protein (HIP) partial mRNA Length = 3213 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 53 ggcagcggcggcgctggcgg 72 |||||||||||||||||||| Sbjct: 1380 ggcagcggcggcgctggcgg 1361
>emb|AL389894.4|LMFLCHR4A Leishmania major Friedlin chromosome 4, left end Length = 225394 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 53 ggcagcggcggcgctggcgg 72 |||||||||||||||||||| Sbjct: 211494 ggcagcggcggcgctggcgg 211513
>ref|XM_390920.1| Gibberella zeae PH-1 chromosome 3 hypothetical protein (FG10744.1) partial mRNA Length = 771 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 159 gcctcgaggagtatctcctcaaga 182 ||||| |||||||||||||||||| Sbjct: 371 gcctccaggagtatctcctcaaga 394
>emb|CR940309.6| M.truncatula DNA sequence from clone MTH2-10C20 on chromosome 3, complete sequence Length = 114380 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 404 aaagaagatgatatttgtat 423 |||||||||||||||||||| Sbjct: 93828 aaagaagatgatatttgtat 93809
>emb|CR718103.2|CNS0GH19 Tetraodon nigroviridis full-length cDNA Length = 610 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 576 tatttgttagcaacatgtgg 595 |||||||||||||||||||| Sbjct: 391 tatttgttagcaacatgtgg 410
>gb|AC004614.2| Homo sapiens PAC clone RP5-1168D11 from 7, complete sequence Length = 112456 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 404 aaagaagatgatatttgtat 423 |||||||||||||||||||| Sbjct: 66590 aaagaagatgatatttgtat 66609
>gb|AC113019.13| Mus musculus chromosome 7, clone RP23-185A21, complete sequence Length = 215975 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 564 agctgggattcatatttgttagca 587 ||||||| |||||||||||||||| Sbjct: 171531 agctggggttcatatttgttagca 171554
>gb|AC142334.1| Pan troglodytes BAC clone RP43-34J11 from 7, complete sequence Length = 168008 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 404 aaagaagatgatatttgtat 423 |||||||||||||||||||| Sbjct: 11753 aaagaagatgatatttgtat 11734
>emb|AL356499.16| Human DNA sequence from clone RP1-315J21 on chromosome X Contains the 3' end of a novel gene, complete sequence Length = 142557 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 482 gatgatctgcatagaaaaat 501 |||||||||||||||||||| Sbjct: 123508 gatgatctgcatagaaaaat 123527
>gb|AC123524.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0052C03, complete sequence Length = 157178 Score = 40.1 bits (20), Expect = 8.2 Identities = 29/32 (90%) Strand = Plus / Minus Query: 52 cggcagcggcggcgctggcggcgaggggagca 83 |||| ||||||||| |||||||||||||||| Sbjct: 88875 cggcggcggcggcggcggcggcgaggggagca 88844
>emb|AL121712.27|HSJ710H13 Human DNA sequence from clone RP4-710H13 on chromosome 20 Contains the SNAI1 gene encoding the snail 1 (drosophila homolog) zinc finger protein, a putative novel gene, two CpG islands, ESTs, STSs and GSSs, complete sequence Length = 79779 Score = 40.1 bits (20), Expect = 8.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 52 cggcagcggcggcgctggcggcgagggg 79 |||||||||||||| |||||||||||| Sbjct: 47874 cggcagcggcggcggcggcggcgagggg 47901
>emb|AJ132323.1|CGL132323 Casuarina glauca mRNA for chalcone synthase Length = 1407 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 310 acatgcgctggaatttctct 329 |||||||||||||||||||| Sbjct: 244 acatgcgctggaatttctct 225
>gb|AC022457.8| Oryza sativa chromosome 10 BAC OSJNBa0006L06 genomic sequence, complete sequence Length = 162339 Score = 40.1 bits (20), Expect = 8.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 50 gacggcagcggcggcgctggcggcgagg 77 |||||||||||||||| |||||||||| Sbjct: 97086 gacggcagcggcggcggcggcggcgagg 97059
>gb|AC158749.5| Mus musculus chromosome 7, clone RP23-285C18, complete sequence Length = 237364 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 564 agctgggattcatatttgttagca 587 ||||||| |||||||||||||||| Sbjct: 22826 agctggggttcatatttgttagca 22849
>gb|AF400566.1| Rubus idaeus chalcone synthase 11 (CHS11) mRNA, complete cds Length = 1507 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 310 acatgcgctggaatttctct 329 |||||||||||||||||||| Sbjct: 253 acatgcgctggaatttctct 234
>gb|CP000239.1| Synechococcus sp. JA-3-3Ab, complete genome Length = 2932766 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 55 cagcggcggcgctggcggcg 74 |||||||||||||||||||| Sbjct: 1500663 cagcggcggcgctggcggcg 1500644
>gb|AC091776.19| Chlamydomonas reinhardtii clone cr-4i21, complete sequence Length = 48498 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 55 cagcggcggcgctggcggcg 74 |||||||||||||||||||| Sbjct: 23685 cagcggcggcgctggcggcg 23666
>gb|AC090435.28| Chlamydomonas reinhardtii clone cr-32m22, complete sequence Length = 79677 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 55 cagcggcggcgctggcggcg 74 |||||||||||||||||||| Sbjct: 2399 cagcggcggcgctggcggcg 2380
>ref|NM_142016.1| Drosophila melanogaster CG8773-RA (CG8773), mRNA Length = 3125 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 284 gtggagtacttgtactcatt 303 |||||||||||||||||||| Sbjct: 1659 gtggagtacttgtactcatt 1640
>gb|AC007754.4|AC007754 Drosophila melanogaster, chromosome 3R, region 87E-87E, BAC clone BACR05K08, complete sequence Length = 188967 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 284 gtggagtacttgtactcatt 303 |||||||||||||||||||| Sbjct: 116054 gtggagtacttgtactcatt 116035
>gb|AC019230.5|AC019230 Homo sapiens BAC clone RP11-571O22 from X, complete sequence Length = 179483 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 482 gatgatctgcatagaaaaat 501 |||||||||||||||||||| Sbjct: 10882 gatgatctgcatagaaaaat 10901
>gb|AC153375.3| Mus musculus 6 BAC RP23-353E9 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 198876 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 412 tgatatttgtatgggtttag 431 |||||||||||||||||||| Sbjct: 62983 tgatatttgtatgggtttag 62964
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 52 cggcagcggcggcgctggcg 71 |||||||||||||||||||| Sbjct: 25069117 cggcagcggcggcgctggcg 25069136 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 46 ggaggacggcagcggcggcg 65 |||||||||||||||||||| Sbjct: 16600189 ggaggacggcagcggcggcg 16600170
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 8.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 52 cggcagcggcggcgctggcggcgagggg 79 |||||||||||||| |||||||||||| Sbjct: 19411333 cggcagcggcggcggcggcggcgagggg 19411360 Score = 40.1 bits (20), Expect = 8.2 Identities = 29/32 (90%) Strand = Plus / Minus Query: 52 cggcagcggcggcgctggcggcgaggggagca 83 |||| ||||||||| |||||||||||||||| Sbjct: 6305597 cggcggcggcggcggcggcggcgaggggagca 6305566
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 8.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 50 gacggcagcggcggcgctggcggcgagg 77 |||||||||||||||| |||||||||| Sbjct: 16752569 gacggcagcggcggcggcggcggcgagg 16752542
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 8.2 Identities = 29/32 (90%) Strand = Plus / Plus Query: 52 cggcagcggcggcgctggcggcgaggggagca 83 |||| ||||||||| |||||||||||||||| Sbjct: 27173599 cggcggcggcggcggcggcggcgaggggagca 27173630 Score = 40.1 bits (20), Expect = 8.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 50 gacggcagcggcggcgctggcggcgagg 77 |||||| ||||||||| ||||||||||| Sbjct: 8988554 gacggcggcggcggcgatggcggcgagg 8988581
>gb|AY237728.1| Glycine max chalcone synthase (chs8) gene, complete cds Length = 2856 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 310 acatgcgctggaatttctct 329 |||||||||||||||||||| Sbjct: 1013 acatgcgctggaatttctct 994
>gb|AC015555.13|AC015555 Homo sapiens chromosome 21 clone RP11-113F1, complete sequence Length = 181511 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 400 caacaaagaagatgatattt 419 |||||||||||||||||||| Sbjct: 105788 caacaaagaagatgatattt 105807
>gb|AC138356.3| Homo sapiens chromosome 8, clone RP11-863K10, complete sequence Length = 190274 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 502 tgtgaggccaccagcaaatc 521 |||||||||||||||||||| Sbjct: 171709 tgtgaggccaccagcaaatc 171728
>gb|AE004863.1| Pseudomonas aeruginosa PAO1, section 424 of 529 of the complete genome Length = 10535 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 59 ggcggcgctggcggcgaggg 78 |||||||||||||||||||| Sbjct: 4974 ggcggcgctggcggcgaggg 4955
>gb|BT003783.1| Drosophila melanogaster LP02833 full insert cDNA Length = 3142 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 284 gtggagtacttgtactcatt 303 |||||||||||||||||||| Sbjct: 1658 gtggagtacttgtactcatt 1639
>gb|AC137579.3| Homo sapiens chromosome 8, clone RP11-346L1, complete sequence Length = 176794 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 502 tgtgaggccaccagcaaatc 521 |||||||||||||||||||| Sbjct: 138637 tgtgaggccaccagcaaatc 138618
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 58 cggcggcgctggcggcgagg 77 |||||||||||||||||||| Sbjct: 3061188 cggcggcgctggcggcgagg 3061207
>dbj|AP000836.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, clone:P0038F12 Length = 190014 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 52 cggcagcggcggcgctggcg 71 |||||||||||||||||||| Sbjct: 117075 cggcagcggcggcgctggcg 117094
>dbj|AP004858.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1725_H08 Length = 155431 Score = 40.1 bits (20), Expect = 8.2 Identities = 29/32 (90%) Strand = Plus / Plus Query: 52 cggcagcggcggcgctggcggcgaggggagca 83 |||| ||||||||| |||||||||||||||| Sbjct: 70048 cggcggcggcggcggcggcggcgaggggagca 70079
>dbj|AP005055.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0684A08 Length = 137841 Score = 40.1 bits (20), Expect = 8.2 Identities = 29/32 (90%) Strand = Plus / Plus Query: 52 cggcagcggcggcgctggcggcgaggggagca 83 |||| ||||||||| |||||||||||||||| Sbjct: 24270 cggcggcggcggcggcggcggcgaggggagca 24301
>dbj|AP004993.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0037N01 Length = 174085 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 46 ggaggacggcagcggcggcg 65 |||||||||||||||||||| Sbjct: 57124 ggaggacggcagcggcggcg 57105
>dbj|AP004630.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0031A09 Length = 162511 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 46 ggaggacggcagcggcggcg 65 |||||||||||||||||||| Sbjct: 116961 ggaggacggcagcggcggcg 116942
>dbj|AP005969.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1119_C03 Length = 69710 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 57 gcggcggcgctggcggcgag 76 |||||||||||||||||||| Sbjct: 7644 gcggcggcgctggcggcgag 7625
>dbj|AP005903.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:B1012G11 Length = 167168 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 57 gcggcggcgctggcggcgag 76 |||||||||||||||||||| Sbjct: 152715 gcggcggcgctggcggcgag 152696
>emb|AL713904.3|CNS07YQ4 Oryza sativa chromosome 12, . BAC OJ1306_H03 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 121563 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 52 cggcagcggcggcgctggcg 71 |||||||||||||||||||| Sbjct: 62362 cggcagcggcggcgctggcg 62343
>dbj|AP004230.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ2013_G04 Length = 73667 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 46 ggaggacggcagcggcggcg 65 |||||||||||||||||||| Sbjct: 12636 ggaggacggcagcggcggcg 12617
>dbj|AP003840.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1634_B10 Length = 100294 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 46 ggaggacggcagcggcggcg 65 |||||||||||||||||||| Sbjct: 88693 ggaggacggcagcggcggcg 88674
>emb|AL928974.12| Mouse DNA sequence from clone RP23-56C2 on chromosome 2, complete sequence Length = 195442 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 418 ttgtatgggtttagatgatg 437 |||||||||||||||||||| Sbjct: 107449 ttgtatgggtttagatgatg 107430
>dbj|AP005872.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:B1168F12 Length = 141524 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 45 tggaggacggcagcggcggc 64 |||||||||||||||||||| Sbjct: 74359 tggaggacggcagcggcggc 74340
>dbj|BS000133.1| Pan troglodytes chromosome 22 clone:RP43-052N14, map 22, complete sequences Length = 32451 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 400 caacaaagaagatgatattt 419 |||||||||||||||||||| Sbjct: 30325 caacaaagaagatgatattt 30306
>gb|AE005040.1| Halobacterium sp. NRC-1 section 71 of 170 of the complete genome Length = 10881 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 57 gcggcggcgctggcggcgag 76 |||||||||||||||||||| Sbjct: 1750 gcggcggcgctggcggcgag 1769
>dbj|AP006160.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:B1178F07 Length = 144454 Score = 40.1 bits (20), Expect = 8.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 50 gacggcagcggcggcgctggcggcgagg 77 |||||| ||||||||| ||||||||||| Sbjct: 29000 gacggcggcggcggcgatggcggcgagg 29027
>dbj|AP005803.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0060K08 Length = 159626 Score = 40.1 bits (20), Expect = 8.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 50 gacggcagcggcggcgctggcggcgagg 77 |||||| ||||||||| ||||||||||| Sbjct: 61163 gacggcggcggcggcgatggcggcgagg 61190
>emb|BX546483.5| Mouse DNA sequence from clone RP24-121F2 on chromosome X, complete sequence Length = 74439 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 566 ctgggattcatatttgttag 585 |||||||||||||||||||| Sbjct: 33673 ctgggattcatatttgttag 33692
>dbj|AK108165.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-139-H04, full insert sequence Length = 953 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 52 cggcagcggcggcgctggcg 71 |||||||||||||||||||| Sbjct: 269 cggcagcggcggcgctggcg 288
>emb|AJ340459.1|HSA340459 Homo sapiens genomic sequence surrounding NotI site, clone NL1-VE13R Length = 836 Score = 40.1 bits (20), Expect = 8.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 70 cggcgaggggagcacgagcgggggcagg 97 |||||||||||||| ||| ||||||||| Sbjct: 274 cggcgaggggagcaggagggggggcagg 301
>dbj|AK100409.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023087H04, full insert sequence Length = 2595 Score = 40.1 bits (20), Expect = 8.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 50 gacggcagcggcggcgctggcggcgagg 77 |||||| ||||||||| ||||||||||| Sbjct: 69 gacggcggcggcggcgatggcggcgagg 42
>dbj|AK067272.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013098D22, full insert sequence Length = 1162 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 46 ggaggacggcagcggcggcg 65 |||||||||||||||||||| Sbjct: 427 ggaggacggcagcggcggcg 446
>gb|AE003699.3| Drosophila melanogaster chromosome 3R, section 37 of 118 of the complete sequence Length = 208424 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 284 gtggagtacttgtactcatt 303 |||||||||||||||||||| Sbjct: 132640 gtggagtacttgtactcatt 132621
>dbj|AP001746.1| Homo sapiens genomic DNA, chromosome 21q, section 90/105 Length = 340000 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 400 caacaaagaagatgatattt 419 |||||||||||||||||||| Sbjct: 124216 caacaaagaagatgatattt 124197
>dbj|AP006291.2| Homo sapiens genomic DNA, chromosome 8 clone:RP11-346L1, complete sequence Length = 104996 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 502 tgtgaggccaccagcaaatc 521 |||||||||||||||||||| Sbjct: 66839 tgtgaggccaccagcaaatc 66820
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 8.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 50 gacggcagcggcggcgctggcggcgagg 77 |||||||||||||||| |||||||||| Sbjct: 16761609 gacggcagcggcggcggcggcggcgagg 16761582
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 8.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 52 cggcagcggcggcgctggcggcgagggg 79 |||||||||||||| |||||||||||| Sbjct: 19570882 cggcagcggcggcggcggcggcgagggg 19570909 Score = 40.1 bits (20), Expect = 8.2 Identities = 29/32 (90%) Strand = Plus / Minus Query: 52 cggcagcggcggcgctggcggcgaggggagca 83 |||| ||||||||| |||||||||||||||| Sbjct: 6372064 cggcggcggcggcggcggcggcgaggggagca 6372033
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 52 cggcagcggcggcgctggcg 71 |||||||||||||||||||| Sbjct: 24997322 cggcagcggcggcgctggcg 24997341 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 46 ggaggacggcagcggcggcg 65 |||||||||||||||||||| Sbjct: 16553422 ggaggacggcagcggcggcg 16553403
>emb|AL713948.4|CNS07YPR Oryza sativa chromosome 12, . BAC OJ1008_A01 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 129944 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 46 ggaggacggcagcggcggcg 65 |||||||||||||||||||| Sbjct: 70577 ggaggacggcagcggcggcg 70596
>emb|AL928754.2|CNS08CBR Oryza sativa chromosome 12, . BAC OSJNBa0056D07 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 146686 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 52 cggcagcggcggcgctggcg 71 |||||||||||||||||||| Sbjct: 38051 cggcagcggcggcgctggcg 38032
>dbj|AP006130.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT36O13, TM0226, complete sequence Length = 140838 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 55 cagcggcggcgctggcggcg 74 |||||||||||||||||||| Sbjct: 37101 cagcggcggcgctggcggcg 37082
>gb|L24516.1|TFRCHS4AAA Trifolium subterraneum chalcone synthase (CHS4) gene, 5' end Length = 1674 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 310 acatgcgctggaatttctct 329 |||||||||||||||||||| Sbjct: 778 acatgcgctggaatttctct 759
>gb|L24515.1|TFRCHS3AAA Trifolium subterraneum chalcone synthase (CHS3) gene, complete cds Length = 2290 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 310 acatgcgctggaatttctct 329 |||||||||||||||||||| Sbjct: 778 acatgcgctggaatttctct 759
>gb|M91194.1|TFRCHS2B Trifolium subterraneum chalcone synthase (CHS2) gene, complete cds Length = 2760 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 310 acatgcgctggaatttctct 329 |||||||||||||||||||| Sbjct: 1378 acatgcgctggaatttctct 1359
>dbj|D10223.1|PUECHS Pueraria lobata mRNA for chalcone synthase, complete cds Length = 1445 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 310 acatgcgctggaatttctct 329 |||||||||||||||||||| Sbjct: 275 acatgcgctggaatttctct 256
>dbj|D63855.1|PUECHSY Pueraria lobata gene for chalcone synthase, partial sequence Length = 1155 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 310 acatgcgctggaatttctct 329 |||||||||||||||||||| Sbjct: 1106 acatgcgctggaatttctct 1087
>dbj|AP001623.1| Homo sapiens genomic DNA, chromosome 21, clone:KB169B4, MX1-D21S171 region, complete sequence Length = 157739 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 400 caacaaagaagatgatattt 419 |||||||||||||||||||| Sbjct: 20732 caacaaagaagatgatattt 20713
>dbj|AP001622.1| Homo sapiens genomic DNA, chromosome 21, clone:KB1430A10, MX1-D21S171 region, complete sequence Length = 149850 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 400 caacaaagaagatgatattt 419 |||||||||||||||||||| Sbjct: 149484 caacaaagaagatgatattt 149465
>dbj|AB038161.1| Homo sapiens ABCG1 gene for ABC transporter (ATP-binding cassette, sub-family G (WHITE), member 1), complete cds Length = 81000 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 400 caacaaagaagatgatattt 419 |||||||||||||||||||| Sbjct: 72168 caacaaagaagatgatattt 72149
>dbj|AP000066.1| Homo sapiens genomic DNA, chromosome 8p11.2, senescence gene region, section 2/19 Length = 100000 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 502 tgtgaggccaccagcaaatc 521 |||||||||||||||||||| Sbjct: 75116 tgtgaggccaccagcaaatc 75135 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,675,616 Number of Sequences: 3902068 Number of extensions: 4675616 Number of successful extensions: 111283 Number of sequences better than 10.0: 139 Number of HSP's better than 10.0 without gapping: 151 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 108974 Number of HSP's gapped (non-prelim): 2307 length of query: 605 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 582 effective length of database: 17,143,297,704 effective search space: 9977399263728 effective search space used: 9977399263728 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
