ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baala06
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY223807.1| Hordeum vulgare AP2 transcriptional activator (DR... 769 0.0
2gb|AF521303.1| Hordeum vulgare dehydration-responsive AP2 domain... 769 0.0
3dbj|AB193608.1| Triticum aestivum Wdreb2 mRNA for EREBP/AP2 type... 210 3e-51
4gb|AY781359.1| Triticum aestivum DREB transcription factor 5B (D... 210 3e-51
5gb|AY781358.1| Triticum aestivum DREB transcription factor 5A (D... 210 3e-51
6gb|AY781357.1| Triticum aestivum DREB transcription factor 5C (D... 210 3e-51
7gb|AY781356.1| Triticum aestivum DREB transcription factor 4C (D... 180 2e-42
8gb|AY781355.1| Triticum aestivum DREB transcription factor 4B (D... 180 2e-42
9gb|AY781354.1| Triticum aestivum DREB transcription factor 4A (D... 180 2e-42
10gb|AY781351.1| Triticum aestivum DREB transcription factor 3C (D... 176 4e-41
11gb|AY781350.1| Triticum aestivum DREB transcription factor 3B (D... 176 4e-41
12gb|AY781349.1| Triticum aestivum DREB transcription factor 3A (D... 176 4e-41
13emb|CR854834.11| Zebrafish DNA sequence from clone DKEYP-92B10 i... 42 1.5
14gb|AC013409.8| Homo sapiens BAC clone RP11-471D6 from 2, complet... 42 1.5
15gb|AC126046.3| Mus musculus BAC clone RP23-176P24 from chromosom... 40 5.8
16emb|CT010426.3| Mouse DNA sequence from clone RP23-17A17 on chro... 40 5.8
17gb|AC127337.4| Mus musculus BAC clone RP23-168F21 from 12, compl... 40 5.8
18ref|NG_000018.1| Homo sapiens type I (acidic) hair keratin gene ... 40 5.8
19gb|AC118608.7| Mus musculus chromosome 17, clone RP23-478J10, co... 40 5.8
20gb|AC134382.13| Mus musculus strain C57BL/6J clone rp23-167l1, c... 40 5.8
21emb|CR855865.5| Zebrafish DNA sequence from clone DKEY-267L2 in ... 40 5.8
22emb|CR936847.6| Mouse DNA sequence from clone DN-393H17 on chrom... 40 5.8
23emb|AL596136.5| Mouse DNA sequence from clone RP23-83I13 on chro... 40 5.8
24gb|AC087518.5| Homo sapiens chromosome , clone RP11-359E19, comp... 40 5.8
25gb|AC007961.32| Mus musculus strain 129S6/SvEvTac clone rp21-594... 40 5.8
26gb|AC012417.13| Homo sapiens chromosome 18, clone RP11-408H20, c... 40 5.8
27gb|AC005302.70| Mus musculus strain 129S6/SvEvTac chromosome 10 ... 40 5.8
28gb|AC007991.7|AC007991 Homo sapiens, clone RP11-44K6, complete s... 40 5.8
29gb|AC018683.4|AC018683 Homo sapiens BAC clone RP11-423P14 from 4... 40 5.8
30gb|AC003958.2| Homo sapiens chromosome 17, clone RP5-18F17, comp... 40 5.8
31gb|AC018364.5|AC018364 Arabidopsis thaliana chromosome 1 BAC F23... 40 5.8
32gb|AC008262.4|AC008262 Genomic sequence for Arabidopsis thaliana... 40 5.8
33gb|U47946.1|OMU47946 Oncorhynchus mykiss RBTMx3 mRNA, complete cds 40 5.8
34gb|AC108138.6| Homo sapiens chromosome 18, clone RP11-235B21, co... 40 5.8
35emb|AL808132.5| Mouse DNA sequence from clone RP23-125A12 on chr... 40 5.8 
>gb|AY223807.1| Hordeum vulgare AP2 transcriptional activator (DRF1) gene, complete
            cds, alternatively spliced
          Length = 3495

 Score =  769 bits (388), Expect = 0.0
 Identities = 414/419 (98%), Gaps = 3/419 (0%)
 Strand = Plus / Plus

                                                                        
Query: 1    tctgtacctggntggcttggnaccaaggncatgttggnagggcatgctgcattctgatta 60
            ||||||||||| |||||||| ||||||| |||||||| ||||||||||||||||||||||
Sbjct: 3079 tctgtacctggatggcttgg-accaagg-catgttgg-agggcatgctgcattctgatta 3135

                                                                        
Query: 61   tcctttcccagtgtggatatcagaggatcggccaatgcacaaccctgccttccatgatgc 120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3136 tcctttcccagtgtggatatcagaggatcggccaatgcacaaccctgccttccatgatgc 3195

                                                                        
Query: 121  tgagatgagcgagttctttgaggggttgtgattcctactggccgccttgctcatggcgtt 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3196 tgagatgagcgagttctttgaggggttgtgattcctactggccgccttgctcatggcgtt 3255

                                                                        
Query: 181  tggtcggcttccccctcggcgtccgctgctgcgtttcaatgaagaagaggtcttccaatg 240
            ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 3256 tggtcggcttccccctcggcgtccgctgctgcgtttcaatgaagaagaggtgttccaatg 3315

                                                                        
Query: 241  aagaagaggtggaccggattggattcctttgcagaactaataagctcctaagctagtttt 300
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3316 aagaagaggtggaccggattggattcctttgcagaactaataagctcctaagctagtttt 3375

                                                                        
Query: 301  ttgtgcttcgtttgtagttctgttggcatggggacccttctctgtttggtgtttcttttg 360
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3376 ttgtgcttcgtttgtagttctgttggcatggggacccttctctgtttggtgtttcttttg 3435

                                                                       
Query: 361  ataagaaaccttattgtgcatcacgatctttggaagtggaataagaaaaatgtgaaatg 419
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3436 ataagaaaccttattgtgcatcacgatctttggaagtggaataagaaaaatgtgaaatg 3494
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>gb|AF521303.1| Hordeum vulgare dehydration-responsive AP2 domain transcriptional
            activator (DRF1.3) mRNA, complete cds
          Length = 1536

 Score =  769 bits (388), Expect = 0.0
 Identities = 414/419 (98%), Gaps = 3/419 (0%)
 Strand = Plus / Plus

                                                                        
Query: 1    tctgtacctggntggcttggnaccaaggncatgttggnagggcatgctgcattctgatta 60
            ||||||||||| |||||||| ||||||| |||||||| ||||||||||||||||||||||
Sbjct: 1120 tctgtacctggatggcttgg-accaagg-catgttgg-agggcatgctgcattctgatta 1176

                                                                        
Query: 61   tcctttcccagtgtggatatcagaggatcggccaatgcacaaccctgccttccatgatgc 120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1177 tcctttcccagtgtggatatcagaggatcggccaatgcacaaccctgccttccatgatgc 1236

                                                                        
Query: 121  tgagatgagcgagttctttgaggggttgtgattcctactggccgccttgctcatggcgtt 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1237 tgagatgagcgagttctttgaggggttgtgattcctactggccgccttgctcatggcgtt 1296

                                                                        
Query: 181  tggtcggcttccccctcggcgtccgctgctgcgtttcaatgaagaagaggtcttccaatg 240
            ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 1297 tggtcggcttccccctcggcgtccgctgctgcgtttcaatgaagaagaggtgttccaatg 1356

                                                                        
Query: 241  aagaagaggtggaccggattggattcctttgcagaactaataagctcctaagctagtttt 300
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1357 aagaagaggtggaccggattggattcctttgcagaactaataagctcctaagctagtttt 1416

                                                                        
Query: 301  ttgtgcttcgtttgtagttctgttggcatggggacccttctctgtttggtgtttcttttg 360
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1417 ttgtgcttcgtttgtagttctgttggcatggggacccttctctgtttggtgtttcttttg 1476

                                                                       
Query: 361  ataagaaaccttattgtgcatcacgatctttggaagtggaataagaaaaatgtgaaatg 419
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1477 ataagaaaccttattgtgcatcacgatctttggaagtggaataagaaaaatgtgaaatg 1535
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>dbj|AB193608.1| Triticum aestivum Wdreb2 mRNA for EREBP/AP2 type transcription
            factor, complete cds
          Length = 1456

 Score =  210 bits (106), Expect = 3e-51
 Identities = 152/162 (93%), Gaps = 4/162 (2%)
 Strand = Plus / Plus

                                                                        
Query: 252  gaccggattggattcctttgcagaactaataagctcctaagctagttttttgtgcttcgt 311
            ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1248 gaccggattggattcctctgcagaactaataagctcctaagctagttttttgtgcttcgt 1307

                                                                        
Query: 312  ttgtagttctgtt-ggcatggggacccttctctgttt-ggtgtttcttttgataagaaac 369
            ||||||||||||| |||||||| || ||||||||||| | |||||||| |||||||||||
Sbjct: 1308 ttgtagttctgttaggcatgggaactcttctctgtttcgatgtttcttgtgataagaaac 1367

                                                      
Query: 370  ctt-attgtgcatcacgatctttggaa-gtggaataagaaaa 409
            ||| ||||||||||||||||||||||| |||||| |||||||
Sbjct: 1368 cttgattgtgcatcacgatctttggaaggtggaaaaagaaaa 1409



 Score =  168 bits (85), Expect = 9e-39
 Identities = 135/148 (91%), Gaps = 3/148 (2%)
 Strand = Plus / Plus

                                                                        
Query: 5    tacctggntggcttggnaccaaggncatgttggnagggcatgctgcattctgattatcct 64
            ||||||| |||||||| ||||||| |||| ||| ||||||||||||| ||||||||||||
Sbjct: 1014 tacctggatggcttgg-accaagg-catgctgg-agggcatgctgcagtctgattatcct 1070

                                                                        
Query: 65   ttcccagtgtggatatcagaggatcggccaatgcacaaccctgccttccatgatgctgag 124
            | |||| |||||||||||||||||||| | ||||||||| ||||||||||||||||||||
Sbjct: 1071 tacccaatgtggatatcagaggatcgggccatgcacaactctgccttccatgatgctgag 1130

                                        
Query: 125  atgagcgagttctttgaggggttgtgat 152
            |||||||||||||| || ||||||||||
Sbjct: 1131 atgagcgagttcttcgaagggttgtgat 1158



 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 47/53 (88%)
 Strand = Plus / Plus

                                                                 
Query: 173  atggcgtttggtcggcttccccctcggcgtccgctgctgcgtttcaatgaaga 225
            |||| ||||||||||||| ||| |||| ||||||||||||| | |||||||||
Sbjct: 1185 atggtgtttggtcggcttgcccttcggtgtccgctgctgcgctccaatgaaga 1237
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>gb|AY781359.1| Triticum aestivum DREB transcription factor 5B (DREB5) mRNA, complete
            cds, alternatively spliced
          Length = 2210

 Score =  210 bits (106), Expect = 3e-51
 Identities = 152/162 (93%), Gaps = 4/162 (2%)
 Strand = Plus / Plus

                                                                        
Query: 252  gaccggattggattcctttgcagaactaataagctcctaagctagttttttgtgcttcgt 311
            ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1266 gaccggattggattcctctgcagaactaataagctcctaagctagttttttgtgcttcgt 1325

                                                                        
Query: 312  ttgtagttctgtt-ggcatggggacccttctctgttt-ggtgtttcttttgataagaaac 369
            ||||||||||||| |||||||| || ||||||||||| | |||||||| |||||||||||
Sbjct: 1326 ttgtagttctgttaggcatgggaactcttctctgtttcgatgtttcttgtgataagaaac 1385

                                                      
Query: 370  ctt-attgtgcatcacgatctttggaa-gtggaataagaaaa 409
            ||| ||||||||||||||||||||||| |||||| |||||||
Sbjct: 1386 cttgattgtgcatcacgatctttggaaggtggaaaaagaaaa 1427



 Score =  168 bits (85), Expect = 9e-39
 Identities = 135/148 (91%), Gaps = 3/148 (2%)
 Strand = Plus / Plus

                                                                        
Query: 5    tacctggntggcttggnaccaaggncatgttggnagggcatgctgcattctgattatcct 64
            ||||||| |||||||| ||||||| |||| ||| ||||||||||||| ||||||||||||
Sbjct: 1032 tacctggatggcttgg-accaagg-catgctgg-agggcatgctgcagtctgattatcct 1088

                                                                        
Query: 65   ttcccagtgtggatatcagaggatcggccaatgcacaaccctgccttccatgatgctgag 124
            | |||| |||||||||||||||||||| | ||||||||| ||||||||||||||||||||
Sbjct: 1089 tacccaatgtggatatcagaggatcgggccatgcacaactctgccttccatgatgctgag 1148

                                        
Query: 125  atgagcgagttctttgaggggttgtgat 152
            |||||||||||||| || ||||||||||
Sbjct: 1149 atgagcgagttcttcgaagggttgtgat 1176



 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 47/53 (88%)
 Strand = Plus / Plus

                                                                 
Query: 173  atggcgtttggtcggcttccccctcggcgtccgctgctgcgtttcaatgaaga 225
            |||| ||||||||||||| ||| |||| ||||||||||||| | |||||||||
Sbjct: 1203 atggtgtttggtcggcttgcccttcggtgtccgctgctgcgctccaatgaaga 1255
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>gb|AY781358.1| Triticum aestivum DREB transcription factor 5A (DREB5) mRNA, complete
            cds, alternatively spliced
          Length = 2354

 Score =  210 bits (106), Expect = 3e-51
 Identities = 152/162 (93%), Gaps = 4/162 (2%)
 Strand = Plus / Plus

                                                                        
Query: 252  gaccggattggattcctttgcagaactaataagctcctaagctagttttttgtgcttcgt 311
            ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1410 gaccggattggattcctctgcagaactaataagctcctaagctagttttttgtgcttcgt 1469

                                                                        
Query: 312  ttgtagttctgtt-ggcatggggacccttctctgttt-ggtgtttcttttgataagaaac 369
            ||||||||||||| |||||||| || ||||||||||| | |||||||| |||||||||||
Sbjct: 1470 ttgtagttctgttaggcatgggaactcttctctgtttcgatgtttcttgtgataagaaac 1529

                                                      
Query: 370  ctt-attgtgcatcacgatctttggaa-gtggaataagaaaa 409
            ||| ||||||||||||||||||||||| |||||| |||||||
Sbjct: 1530 cttgattgtgcatcacgatctttggaaggtggaaaaagaaaa 1571



 Score =  168 bits (85), Expect = 9e-39
 Identities = 135/148 (91%), Gaps = 3/148 (2%)
 Strand = Plus / Plus

                                                                        
Query: 5    tacctggntggcttggnaccaaggncatgttggnagggcatgctgcattctgattatcct 64
            ||||||| |||||||| ||||||| |||| ||| ||||||||||||| ||||||||||||
Sbjct: 1176 tacctggatggcttgg-accaagg-catgctgg-agggcatgctgcagtctgattatcct 1232

                                                                        
Query: 65   ttcccagtgtggatatcagaggatcggccaatgcacaaccctgccttccatgatgctgag 124
            | |||| |||||||||||||||||||| | ||||||||| ||||||||||||||||||||
Sbjct: 1233 tacccaatgtggatatcagaggatcgggccatgcacaactctgccttccatgatgctgag 1292

                                        
Query: 125  atgagcgagttctttgaggggttgtgat 152
            |||||||||||||| || ||||||||||
Sbjct: 1293 atgagcgagttcttcgaagggttgtgat 1320



 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 47/53 (88%)
 Strand = Plus / Plus

                                                                 
Query: 173  atggcgtttggtcggcttccccctcggcgtccgctgctgcgtttcaatgaaga 225
            |||| ||||||||||||| ||| |||| ||||||||||||| | |||||||||
Sbjct: 1347 atggtgtttggtcggcttgcccttcggtgtccgctgctgcgctccaatgaaga 1399
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>gb|AY781357.1| Triticum aestivum DREB transcription factor 5C (DREB5) mRNA, complete
            cds, alternatively spliced
          Length = 2263

 Score =  210 bits (106), Expect = 3e-51
 Identities = 152/162 (93%), Gaps = 4/162 (2%)
 Strand = Plus / Plus

                                                                        
Query: 252  gaccggattggattcctttgcagaactaataagctcctaagctagttttttgtgcttcgt 311
            ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1319 gaccggattggattcctctgcagaactaataagctcctaagctagttttttgtgcttcgt 1378

                                                                        
Query: 312  ttgtagttctgtt-ggcatggggacccttctctgttt-ggtgtttcttttgataagaaac 369
            ||||||||||||| |||||||| || ||||||||||| | |||||||| |||||||||||
Sbjct: 1379 ttgtagttctgttaggcatgggaactcttctctgtttcgatgtttcttgtgataagaaac 1438

                                                      
Query: 370  ctt-attgtgcatcacgatctttggaa-gtggaataagaaaa 409
            ||| ||||||||||||||||||||||| |||||| |||||||
Sbjct: 1439 cttgattgtgcatcacgatctttggaaggtggaaaaagaaaa 1480



 Score =  168 bits (85), Expect = 9e-39
 Identities = 135/148 (91%), Gaps = 3/148 (2%)
 Strand = Plus / Plus

                                                                        
Query: 5    tacctggntggcttggnaccaaggncatgttggnagggcatgctgcattctgattatcct 64
            ||||||| |||||||| ||||||| |||| ||| ||||||||||||| ||||||||||||
Sbjct: 1085 tacctggatggcttgg-accaagg-catgctgg-agggcatgctgcagtctgattatcct 1141

                                                                        
Query: 65   ttcccagtgtggatatcagaggatcggccaatgcacaaccctgccttccatgatgctgag 124
            | |||| |||||||||||||||||||| | ||||||||| ||||||||||||||||||||
Sbjct: 1142 tacccaatgtggatatcagaggatcgggccatgcacaactctgccttccatgatgctgag 1201

                                        
Query: 125  atgagcgagttctttgaggggttgtgat 152
            |||||||||||||| || ||||||||||
Sbjct: 1202 atgagcgagttcttcgaagggttgtgat 1229



 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 47/53 (88%)
 Strand = Plus / Plus

                                                                 
Query: 173  atggcgtttggtcggcttccccctcggcgtccgctgctgcgtttcaatgaaga 225
            |||| ||||||||||||| ||| |||| ||||||||||||| | |||||||||
Sbjct: 1256 atggtgtttggtcggcttgcccttcggtgtccgctgctgcgctccaatgaaga 1308
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>gb|AY781356.1| Triticum aestivum DREB transcription factor 4C (DREB4) mRNA, complete
            cds, alternatively spliced
          Length = 1547

 Score =  180 bits (91), Expect = 2e-42
 Identities = 134/143 (93%), Gaps = 4/143 (2%)
 Strand = Plus / Plus

                                                                        
Query: 257  gattggattcctttgcagaactaataagctcctaagctagttttttgtgcttcgtttgta 316
            |||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 1322 gattggattcctctgcagaactaataagctccta-gctagttttttgtgcttcgtttgta 1380

                                                                        
Query: 317  gttctgtt-ggcatggggacccttctctgttt-ggtgtttcttttgataagaaacctt-a 373
            |||||||| |||||||| || ||||||||||| | |||||||| |||||||||||||| |
Sbjct: 1381 gttctgttaggcatgggaactcttctctgtttcgatgtttcttgtgataagaaaccttga 1440

                                   
Query: 374  ttgtgcatcacgatctttggaag 396
            |||||||||||||||||||||||
Sbjct: 1441 ttgtgcatcacgatctttggaag 1463



 Score =  161 bits (81), Expect = 2e-36
 Identities = 134/148 (90%), Gaps = 3/148 (2%)
 Strand = Plus / Plus

                                                                        
Query: 5    tacctggntggcttggnaccaaggncatgttggnagggcatgctgcattctgattatcct 64
            ||||||| |||||||| ||||||| |||| ||| |||||||||||||  |||||||||||
Sbjct: 1078 tacctggatggcttgg-accaagg-catgctgg-agggcatgctgcaagctgattatcct 1134

                                                                        
Query: 65   ttcccagtgtggatatcagaggatcggccaatgcacaaccctgccttccatgatgctgag 124
            | |||| |||||||||||||||||||| | |||| |||||||||||||||||||||||||
Sbjct: 1135 tacccaatgtggatatcagaggatcgggccatgcgcaaccctgccttccatgatgctgag 1194

                                        
Query: 125  atgagcgagttctttgaggggttgtgat 152
            |||||||||||||| || ||||||||||
Sbjct: 1195 atgagcgagttcttcgaagggttgtgat 1222



 Score = 50.1 bits (25), Expect = 0.006
 Identities = 46/53 (86%)
 Strand = Plus / Plus

                                                                 
Query: 173  atggcgtttggtcggcttccccctcggcgtccgctgctgcgtttcaatgaaga 225
            |||| ||||||||||||| ||| |||| ||||||||||| | | |||||||||
Sbjct: 1251 atggtgtttggtcggcttgcccttcggtgtccgctgctgtgctccaatgaaga 1303
to top
>gb|AY781355.1| Triticum aestivum DREB transcription factor 4B (DREB4) mRNA, complete
            cds, alternatively spliced
          Length = 1494

 Score =  180 bits (91), Expect = 2e-42
 Identities = 134/143 (93%), Gaps = 4/143 (2%)
 Strand = Plus / Plus

                                                                        
Query: 257  gattggattcctttgcagaactaataagctcctaagctagttttttgtgcttcgtttgta 316
            |||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 1269 gattggattcctctgcagaactaataagctccta-gctagttttttgtgcttcgtttgta 1327

                                                                        
Query: 317  gttctgtt-ggcatggggacccttctctgttt-ggtgtttcttttgataagaaacctt-a 373
            |||||||| |||||||| || ||||||||||| | |||||||| |||||||||||||| |
Sbjct: 1328 gttctgttaggcatgggaactcttctctgtttcgatgtttcttgtgataagaaaccttga 1387

                                   
Query: 374  ttgtgcatcacgatctttggaag 396
            |||||||||||||||||||||||
Sbjct: 1388 ttgtgcatcacgatctttggaag 1410



 Score =  161 bits (81), Expect = 2e-36
 Identities = 134/148 (90%), Gaps = 3/148 (2%)
 Strand = Plus / Plus

                                                                        
Query: 5    tacctggntggcttggnaccaaggncatgttggnagggcatgctgcattctgattatcct 64
            ||||||| |||||||| ||||||| |||| ||| |||||||||||||  |||||||||||
Sbjct: 1025 tacctggatggcttgg-accaagg-catgctgg-agggcatgctgcaagctgattatcct 1081

                                                                        
Query: 65   ttcccagtgtggatatcagaggatcggccaatgcacaaccctgccttccatgatgctgag 124
            | |||| |||||||||||||||||||| | |||| |||||||||||||||||||||||||
Sbjct: 1082 tacccaatgtggatatcagaggatcgggccatgcgcaaccctgccttccatgatgctgag 1141

                                        
Query: 125  atgagcgagttctttgaggggttgtgat 152
            |||||||||||||| || ||||||||||
Sbjct: 1142 atgagcgagttcttcgaagggttgtgat 1169



 Score = 50.1 bits (25), Expect = 0.006
 Identities = 46/53 (86%)
 Strand = Plus / Plus

                                                                 
Query: 173  atggcgtttggtcggcttccccctcggcgtccgctgctgcgtttcaatgaaga 225
            |||| ||||||||||||| ||| |||| ||||||||||| | | |||||||||
Sbjct: 1198 atggtgtttggtcggcttgcccttcggtgtccgctgctgtgctccaatgaaga 1250
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>gb|AY781354.1| Triticum aestivum DREB transcription factor 4A (DREB4) mRNA, complete
            cds, alternatively spliced
          Length = 1638

 Score =  180 bits (91), Expect = 2e-42
 Identities = 134/143 (93%), Gaps = 4/143 (2%)
 Strand = Plus / Plus

                                                                        
Query: 257  gattggattcctttgcagaactaataagctcctaagctagttttttgtgcttcgtttgta 316
            |||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 1413 gattggattcctctgcagaactaataagctccta-gctagttttttgtgcttcgtttgta 1471

                                                                        
Query: 317  gttctgtt-ggcatggggacccttctctgttt-ggtgtttcttttgataagaaacctt-a 373
            |||||||| |||||||| || ||||||||||| | |||||||| |||||||||||||| |
Sbjct: 1472 gttctgttaggcatgggaactcttctctgtttcgatgtttcttgtgataagaaaccttga 1531

                                   
Query: 374  ttgtgcatcacgatctttggaag 396
            |||||||||||||||||||||||
Sbjct: 1532 ttgtgcatcacgatctttggaag 1554



 Score =  161 bits (81), Expect = 2e-36
 Identities = 134/148 (90%), Gaps = 3/148 (2%)
 Strand = Plus / Plus

                                                                        
Query: 5    tacctggntggcttggnaccaaggncatgttggnagggcatgctgcattctgattatcct 64
            ||||||| |||||||| ||||||| |||| ||| |||||||||||||  |||||||||||
Sbjct: 1169 tacctggatggcttgg-accaagg-catgctgg-agggcatgctgcaagctgattatcct 1225

                                                                        
Query: 65   ttcccagtgtggatatcagaggatcggccaatgcacaaccctgccttccatgatgctgag 124
            | |||| |||||||||||||||||||| | |||| |||||||||||||||||||||||||
Sbjct: 1226 tacccaatgtggatatcagaggatcgggccatgcgcaaccctgccttccatgatgctgag 1285

                                        
Query: 125  atgagcgagttctttgaggggttgtgat 152
            |||||||||||||| || ||||||||||
Sbjct: 1286 atgagcgagttcttcgaagggttgtgat 1313



 Score = 50.1 bits (25), Expect = 0.006
 Identities = 46/53 (86%)
 Strand = Plus / Plus

                                                                 
Query: 173  atggcgtttggtcggcttccccctcggcgtccgctgctgcgtttcaatgaaga 225
            |||| ||||||||||||| ||| |||| ||||||||||| | | |||||||||
Sbjct: 1342 atggtgtttggtcggcttgcccttcggtgtccgctgctgtgctccaatgaaga 1394
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>gb|AY781351.1| Triticum aestivum DREB transcription factor 3C (DREB3) mRNA, complete
            cds, alternatively spliced
          Length = 1234

 Score =  176 bits (89), Expect = 4e-41
 Identities = 136/148 (91%), Gaps = 3/148 (2%)
 Strand = Plus / Plus

                                                                        
Query: 5    tacctggntggcttggnaccaaggncatgttggnagggcatgctgcattctgattatcct 64
            ||||||| |||||||| ||||||| |||| ||| ||||||||||||| ||||||||||||
Sbjct: 978  tacctggatggcttgg-accaagg-catgctgg-agggcatgctgcagtctgattatcct 1034

                                                                        
Query: 65   ttcccagtgtggatatcagaggatcggccaatgcacaaccctgccttccatgatgctgag 124
            | |||| |||||||||||||||||||| | ||||||||||||||||||||||||||||||
Sbjct: 1035 tacccaatgtggatatcagaggatcgggccatgcacaaccctgccttccatgatgctgag 1094

                                        
Query: 125  atgagcgagttctttgaggggttgtgat 152
            |||||||||||||| || ||||||||||
Sbjct: 1095 atgagcgagttcttcgaagggttgtgat 1122



 Score = 50.1 bits (25), Expect = 0.006
 Identities = 37/41 (90%)
 Strand = Plus / Plus

                                                     
Query: 173  atggcgtttggtcggcttccccctcggcgtccgctgctgcg 213
            |||| ||||||||||||| ||| |||| |||||||||||||
Sbjct: 1149 atggtgtttggtcggcttgcccttcggtgtccgctgctgcg 1189
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>gb|AY781350.1| Triticum aestivum DREB transcription factor 3B (DREB3) mRNA, complete
            cds, alternatively spliced
          Length = 1181

 Score =  176 bits (89), Expect = 4e-41
 Identities = 136/148 (91%), Gaps = 3/148 (2%)
 Strand = Plus / Plus

                                                                        
Query: 5    tacctggntggcttggnaccaaggncatgttggnagggcatgctgcattctgattatcct 64
            ||||||| |||||||| ||||||| |||| ||| ||||||||||||| ||||||||||||
Sbjct: 925  tacctggatggcttgg-accaagg-catgctgg-agggcatgctgcagtctgattatcct 981

                                                                        
Query: 65   ttcccagtgtggatatcagaggatcggccaatgcacaaccctgccttccatgatgctgag 124
            | |||| |||||||||||||||||||| | ||||||||||||||||||||||||||||||
Sbjct: 982  tacccaatgtggatatcagaggatcgggccatgcacaaccctgccttccatgatgctgag 1041

                                        
Query: 125  atgagcgagttctttgaggggttgtgat 152
            |||||||||||||| || ||||||||||
Sbjct: 1042 atgagcgagttcttcgaagggttgtgat 1069



 Score = 50.1 bits (25), Expect = 0.006
 Identities = 37/41 (90%)
 Strand = Plus / Plus

                                                     
Query: 173  atggcgtttggtcggcttccccctcggcgtccgctgctgcg 213
            |||| ||||||||||||| ||| |||| |||||||||||||
Sbjct: 1096 atggtgtttggtcggcttgcccttcggtgtccgctgctgcg 1136
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>gb|AY781349.1| Triticum aestivum DREB transcription factor 3A (DREB3) mRNA, complete
            cds, alternatively spliced
          Length = 1325

 Score =  176 bits (89), Expect = 4e-41
 Identities = 136/148 (91%), Gaps = 3/148 (2%)
 Strand = Plus / Plus

                                                                        
Query: 5    tacctggntggcttggnaccaaggncatgttggnagggcatgctgcattctgattatcct 64
            ||||||| |||||||| ||||||| |||| ||| ||||||||||||| ||||||||||||
Sbjct: 1069 tacctggatggcttgg-accaagg-catgctgg-agggcatgctgcagtctgattatcct 1125

                                                                        
Query: 65   ttcccagtgtggatatcagaggatcggccaatgcacaaccctgccttccatgatgctgag 124
            | |||| |||||||||||||||||||| | ||||||||||||||||||||||||||||||
Sbjct: 1126 tacccaatgtggatatcagaggatcgggccatgcacaaccctgccttccatgatgctgag 1185

                                        
Query: 125  atgagcgagttctttgaggggttgtgat 152
            |||||||||||||| || ||||||||||
Sbjct: 1186 atgagcgagttcttcgaagggttgtgat 1213



 Score = 50.1 bits (25), Expect = 0.006
 Identities = 37/41 (90%)
 Strand = Plus / Plus

                                                     
Query: 173  atggcgtttggtcggcttccccctcggcgtccgctgctgcg 213
            |||| ||||||||||||| ||| |||| |||||||||||||
Sbjct: 1240 atggtgtttggtcggcttgcccttcggtgtccgctgctgcg 1280
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>emb|CR854834.11| Zebrafish DNA sequence from clone DKEYP-92B10 in linkage group 11,
             complete sequence
          Length = 140484

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 338   ttctctgtttggtgtttcttt 358
             |||||||||||||||||||||
Sbjct: 97065 ttctctgtttggtgtttcttt 97045
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>gb|AC013409.8| Homo sapiens BAC clone RP11-471D6 from 2, complete sequence
          Length = 195478

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 338    ttctctgtttggtgtttcttt 358
              |||||||||||||||||||||
Sbjct: 118674 ttctctgtttggtgtttcttt 118694
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>gb|AC126046.3| Mus musculus BAC clone RP23-176P24 from chromosome 19, complete
             sequence
          Length = 240536

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 340   ctctgtttggtgtttctttt 359
             ||||||||||||||||||||
Sbjct: 43016 ctctgtttggtgtttctttt 42997
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>emb|CT010426.3| Mouse DNA sequence from clone RP23-17A17 on chromosome 17, complete
              sequence
          Length = 221525

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 51     attctgattatcctttccca 70
              ||||||||||||||||||||
Sbjct: 152958 attctgattatcctttccca 152977
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>gb|AC127337.4| Mus musculus BAC clone RP23-168F21 from 12, complete sequence
          Length = 209066

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 234    tccaatgaagaagaggtgga 253
              ||||||||||||||||||||
Sbjct: 123589 tccaatgaagaagaggtgga 123570
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>ref|NG_000018.1| Homo sapiens type I (acidic) hair keratin gene cluster (KRTHA.1@) on
             chromosome 17
          Length = 100000

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 326   gcatggggacccttctctgt 345
             ||||||||||||||||||||
Sbjct: 18564 gcatggggacccttctctgt 18545
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>gb|AC118608.7| Mus musculus chromosome 17, clone RP23-478J10, complete sequence
          Length = 196566

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 51    attctgattatcctttccca 70
             ||||||||||||||||||||
Sbjct: 77771 attctgattatcctttccca 77790
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>gb|AC134382.13| Mus musculus strain C57BL/6J clone rp23-167l1, complete sequence
          Length = 194086

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 236    caatgaagaagaggtggacc 255
              ||||||||||||||||||||
Sbjct: 178514 caatgaagaagaggtggacc 178495
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>emb|CR855865.5| Zebrafish DNA sequence from clone DKEY-267L2 in linkage group 3,
             complete sequence
          Length = 149895

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 400   aataagaaaaatgtgaaatg 419
             ||||||||||||||||||||
Sbjct: 19664 aataagaaaaatgtgaaatg 19683
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>emb|CR936847.6| Mouse DNA sequence from clone DN-393H17 on chromosome 11, complete
             sequence
          Length = 170807

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 401   ataagaaaaatgtgaaatgc 420
             ||||||||||||||||||||
Sbjct: 85890 ataagaaaaatgtgaaatgc 85909
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>emb|AL596136.5| Mouse DNA sequence from clone RP23-83I13 on chromosome 11 Contains the
              Rabep1 gene for rabaptin, RAB GTPase binding effector
              protein 1, a ribosomal protein 23a (Rpl23a) pseudogene, a
              ribosomal protein 23A (Rpl23a) pseudogene, the Nup88 gene
              for nucleoporin 88, four novel genes, the C1qbp gene for
              complement component 1 q subcomponent binding protein, the
              Dhx33 gene for DEAH (Asp-Glu-Ala-His) box polypeptide 33, a
               novel pseudogene, a CARD domain pseudogene and six CpG
              islands, complete sequence
          Length = 254116

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 401    ataagaaaaatgtgaaatgc 420
              ||||||||||||||||||||
Sbjct: 197979 ataagaaaaatgtgaaatgc 197998
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>gb|AC087518.5| Homo sapiens chromosome , clone RP11-359E19, complete sequence
          Length = 168531

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 330   ggggacccttctctgtttgg 349
             ||||||||||||||||||||
Sbjct: 45238 ggggacccttctctgtttgg 45219
to top
>gb|AC007961.32| Mus musculus strain 129S6/SvEvTac clone rp21-594l4 map 10, complete
             sequence
          Length = 180585

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 236   caatgaagaagaggtggacc 255
             ||||||||||||||||||||
Sbjct: 25439 caatgaagaagaggtggacc 25420
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>gb|AC012417.13| Homo sapiens chromosome 18, clone RP11-408H20, complete sequence
          Length = 181552

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 394  aagtggaataagaaaaatgt 413
            ||||||||||||||||||||
Sbjct: 2629 aagtggaataagaaaaatgt 2610
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>gb|AC005302.70| Mus musculus strain 129S6/SvEvTac chromosome 10 clone rp21-481n4,
             complete sequence
          Length = 204653

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 236   caatgaagaagaggtggacc 255
             ||||||||||||||||||||
Sbjct: 20163 caatgaagaagaggtggacc 20182
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>gb|AC007991.7|AC007991 Homo sapiens, clone RP11-44K6, complete sequence
          Length = 149008

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 330    ggggacccttctctgtttgg 349
              ||||||||||||||||||||
Sbjct: 136489 ggggacccttctctgtttgg 136470
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>gb|AC018683.4|AC018683 Homo sapiens BAC clone RP11-423P14 from 4, complete sequence
          Length = 201907

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 398   ggaataagaaaaatgtgaaa 417
             ||||||||||||||||||||
Sbjct: 89456 ggaataagaaaaatgtgaaa 89437
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>gb|AC003958.2| Homo sapiens chromosome 17, clone RP5-18F17, complete sequence
          Length = 127833

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 326   gcatggggacccttctctgt 345
             ||||||||||||||||||||
Sbjct: 18563 gcatggggacccttctctgt 18544
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>gb|AC018364.5|AC018364 Arabidopsis thaliana chromosome 1 BAC F23O10 genomic sequence, complete
             sequence
          Length = 93802

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 398   ggaataagaaaaatgtgaaa 417
             ||||||||||||||||||||
Sbjct: 64830 ggaataagaaaaatgtgaaa 64811
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>gb|AC008262.4|AC008262 Genomic sequence for Arabidopsis thaliana BAC F4N2 from chromosome I,
             complete sequence
          Length = 99698

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 398   ggaataagaaaaatgtgaaa 417
             ||||||||||||||||||||
Sbjct: 83933 ggaataagaaaaatgtgaaa 83952
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>gb|U47946.1|OMU47946 Oncorhynchus mykiss RBTMx3 mRNA, complete cds
          Length = 2122

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 118 tgctgagatgagcgagttctttga 141
           |||||||||||||| |||||||||
Sbjct: 909 tgctgagatgagcgtgttctttga 886
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>gb|AC108138.6| Homo sapiens chromosome 18, clone RP11-235B21, complete sequence
          Length = 57830

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 394   aagtggaataagaaaaatgt 413
             ||||||||||||||||||||
Sbjct: 21144 aagtggaataagaaaaatgt 21125
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>emb|AL808132.5| Mouse DNA sequence from clone RP23-125A12 on chromosome X, complete
              sequence
          Length = 201114

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 345    tttggtgtttcttttgataa 364
              ||||||||||||||||||||
Sbjct: 122462 tttggtgtttcttttgataa 122481


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,910,444
Number of Sequences: 3902068
Number of extensions: 3910444
Number of successful extensions: 75111
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 75003
Number of HSP's gapped (non-prelim): 78
length of query: 430
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 408
effective length of database: 17,147,199,772
effective search space: 6996057506976
effective search space used: 6996057506976
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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