ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bah16i10 |
|---|---|
| Clone Library Name | barley_pub |
>RLA0_ORYSA (P41095) 60S acidic ribosomal protein P0| Length = 318 Score = 200 bits (509), Expect = 1e-51 Identities = 101/113 (89%), Positives = 107/113 (94%) Frame = +2 Query: 107 AIKRTKAEKKIAYDQKLCQLLEEYTKVLIAVXDNVGSKQLQEIRKGLRGDSIVLMGKNTL 286 AIKRTKAEKK+AYD+KLCQLL+EYTKVLIAV DNVGS QLQEIRKGLRGDSIVLMGKNTL Sbjct: 1 AIKRTKAEKKVAYDKKLCQLLDEYTKVLIAVADNVGSNQLQEIRKGLRGDSIVLMGKNTL 60 Query: 287 IRRCIKVHSEKTGNKDXLELSNLLVGNVGLIFTKGDLKEVREEVAKYKVGAPA 445 IRRCIKVH++ TGNK+ LEL LLVGNVGLIFTKGDLKEVREEVAKYKVGAPA Sbjct: 61 IRRCIKVHADNTGNKEFLELMPLLVGNVGLIFTKGDLKEVREEVAKYKVGAPA 113
>RLA0_MAIZE (O24573) 60S acidic ribosomal protein P0| Length = 318 Score = 190 bits (482), Expect = 2e-48 Identities = 96/113 (84%), Positives = 105/113 (92%) Frame = +2 Query: 107 AIKRTKAEKKIAYDQKLCQLLEEYTKVLIAVXDNVGSKQLQEIRKGLRGDSIVLMGKNTL 286 AIKRTKAEKKIAYD+KLC LL+EYTKVLIA+ DNVGSKQLQ+IR+GLRGDS+VLMGKNTL Sbjct: 1 AIKRTKAEKKIAYDKKLCSLLDEYTKVLIALADNVGSKQLQDIRRGLRGDSVVLMGKNTL 60 Query: 287 IRRCIKVHSEKTGNKDXLELSNLLVGNVGLIFTKGDLKEVREEVAKYKVGAPA 445 IRRCIKV++EKTGN L +LLVGNVGLIFTKGDLKEVREEVAKYKVGAPA Sbjct: 61 IRRCIKVYAEKTGNHTFDPLMDLLVGNVGLIFTKGDLKEVREEVAKYKVGAPA 113
>RLA0A_ARATH (O04204) 60S acidic ribosomal protein P0-A| Length = 317 Score = 171 bits (432), Expect = 1e-42 Identities = 82/114 (71%), Positives = 97/114 (85%) Frame = +2 Query: 104 MAIKRTKAEKKIAYDQKLCQLLEEYTKVLIAVXDNVGSKQLQEIRKGLRGDSIVLMGKNT 283 MA+K TKAEKKI YD KLCQLL EY+++L+ DNVGS QLQ IRKGLRGDS+VLMGKNT Sbjct: 1 MAVKATKAEKKIVYDSKLCQLLNEYSQILVVAADNVGSTQLQNIRKGLRGDSVVLMGKNT 60 Query: 284 LIRRCIKVHSEKTGNKDXLELSNLLVGNVGLIFTKGDLKEVREEVAKYKVGAPA 445 +++R +++H++KTGN+ L L LL GNVGLIFTKGDLKEV EEVAKYKVGAPA Sbjct: 61 MMKRSVRIHADKTGNQAFLSLLPLLQGNVGLIFTKGDLKEVSEEVAKYKVGAPA 114
>RLA0_SOYBN (P50346) 60S acidic ribosomal protein P0| Length = 320 Score = 170 bits (430), Expect = 2e-42 Identities = 84/114 (73%), Positives = 97/114 (85%) Frame = +2 Query: 104 MAIKRTKAEKKIAYDQKLCQLLEEYTKVLIAVXDNVGSKQLQEIRKGLRGDSIVLMGKNT 283 MA K+TKAEKKIAYD KLC L+EEY ++L+ DNVGS QLQ IRKGLRGDS+VLMGKNT Sbjct: 1 MAPKQTKAEKKIAYDAKLCDLMEEYGQILVVNSDNVGSNQLQNIRKGLRGDSVVLMGKNT 60 Query: 284 LIRRCIKVHSEKTGNKDXLELSNLLVGNVGLIFTKGDLKEVREEVAKYKVGAPA 445 +++R +++H+EKTGN L L LLVGNVGLIFTKGDLKEV EEVAKYKVGAPA Sbjct: 61 MMKRSVRMHAEKTGNNAYLNLIPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPA 114
>RLA0B_ARATH (Q42112) 60S acidic ribosomal protein P0-B| Length = 320 Score = 169 bits (429), Expect = 2e-42 Identities = 82/112 (73%), Positives = 95/112 (84%) Frame = +2 Query: 110 IKRTKAEKKIAYDQKLCQLLEEYTKVLIAVXDNVGSKQLQEIRKGLRGDSIVLMGKNTLI 289 +K TKAEKKIAYD KLCQL++EYT++L+ DNVGS QLQ IRKGLRGDS+VLMGKNT++ Sbjct: 2 VKATKAEKKIAYDTKLCQLIDEYTQILVVAADNVGSTQLQNIRKGLRGDSVVLMGKNTMM 61 Query: 290 RRCIKVHSEKTGNKDXLELSNLLVGNVGLIFTKGDLKEVREEVAKYKVGAPA 445 +R +++HSE TGN L L LL GNVGLIFTKGDLKEV EEVAKYKVGAPA Sbjct: 62 KRSVRIHSENTGNTAILNLLPLLQGNVGLIFTKGDLKEVSEEVAKYKVGAPA 113
>RLA0_LUPLU (P50345) 60S acidic ribosomal protein P0| Length = 322 Score = 169 bits (428), Expect = 3e-42 Identities = 83/114 (72%), Positives = 98/114 (85%) Frame = +2 Query: 104 MAIKRTKAEKKIAYDQKLCQLLEEYTKVLIAVXDNVGSKQLQEIRKGLRGDSIVLMGKNT 283 MA K TKAEKKI YD KLCQLL+EYT++L+ DNVGSKQLQ IR+GLRGDS+VLMGKNT Sbjct: 1 MAPKATKAEKKIVYDGKLCQLLDEYTQILVVNADNVGSKQLQNIRQGLRGDSVVLMGKNT 60 Query: 284 LIRRCIKVHSEKTGNKDXLELSNLLVGNVGLIFTKGDLKEVREEVAKYKVGAPA 445 +++R +++H+EKTGN+ L L LL+GNVGLIFTKG LKEV EEVAKYKVGAPA Sbjct: 61 MMKRSVRIHAEKTGNQAFLNLIPLLIGNVGLIFTKGYLKEVSEEVAKYKVGAPA 114
>RLA0C_ARATH (P57691) 60S acidic ribosomal protein P0-C| Length = 323 Score = 168 bits (425), Expect = 6e-42 Identities = 81/112 (72%), Positives = 95/112 (84%) Frame = +2 Query: 110 IKRTKAEKKIAYDQKLCQLLEEYTKVLIAVXDNVGSKQLQEIRKGLRGDSIVLMGKNTLI 289 +K TKAEKKIAYD KLCQL++EYT++L+ DNVGS QLQ IRKGLRGDS+VLMGKNT++ Sbjct: 2 VKATKAEKKIAYDTKLCQLIDEYTQILVVAADNVGSTQLQNIRKGLRGDSVVLMGKNTMM 61 Query: 290 RRCIKVHSEKTGNKDXLELSNLLVGNVGLIFTKGDLKEVREEVAKYKVGAPA 445 +R +++HSE +GN L L LL GNVGLIFTKGDLKEV EEVAKYKVGAPA Sbjct: 62 KRSVRIHSENSGNTAILNLLPLLQGNVGLIFTKGDLKEVSEEVAKYKVGAPA 113
>RLA0_CHERU (P29764) 60S acidic ribosomal protein P0 (Light-induced 34 kDa| protein) Length = 321 Score = 166 bits (419), Expect = 3e-41 Identities = 81/114 (71%), Positives = 98/114 (85%) Frame = +2 Query: 104 MAIKRTKAEKKIAYDQKLCQLLEEYTKVLIAVXDNVGSKQLQEIRKGLRGDSIVLMGKNT 283 MA+K TKAEKKIAYDQKLCQLL+EY++VLIA DNVGS QLQ IR GLRGDSIVLMGKNT Sbjct: 1 MAVKPTKAEKKIAYDQKLCQLLDEYSQVLIASADNVGSNQLQAIRIGLRGDSIVLMGKNT 60 Query: 284 LIRRCIKVHSEKTGNKDXLELSNLLVGNVGLIFTKGDLKEVREEVAKYKVGAPA 445 +++R I++H+E TGN++ + L + NVGLIFTKGDL +VREE++KYKVGAPA Sbjct: 61 MMKRSIRLHAENTGNENLRNVEQLFLPNVGLIFTKGDLNQVREEISKYKVGAPA 114
>RLA0_CERCA (Q9U3U0) 60S acidic ribosomal protein P0 (CcP0)| Length = 317 Score = 100 bits (248), Expect = 2e-21 Identities = 54/112 (48%), Positives = 72/112 (64%) Frame = +2 Query: 110 IKRTKAEKKIAYDQKLCQLLEEYTKVLIAVXDNVGSKQLQEIRKGLRGDSIVLMGKNTLI 289 ++ KA K Y K+ +L +EY K I DNVGSKQ+Q IR LRG +VLMGKNT++ Sbjct: 2 VRENKAAWKAQYFLKVVELFDEYPKCFIVGADNVGSKQMQNIRTSLRGLGVVLMGKNTMM 61 Query: 290 RRCIKVHSEKTGNKDXLELSNLLVGNVGLIFTKGDLKEVREEVAKYKVGAPA 445 R+ I+ H E N +L + GNVG +FTKGDL EVR+++ + KV APA Sbjct: 62 RKAIRGHLE--NNAQLEKLLPHIKGNVGFVFTKGDLAEVRDKLLESKVRAPA 111
>RLA0_NEUCR (Q96TJ5) 60S acidic ribosomal protein P0| Length = 313 Score = 98.6 bits (244), Expect = 6e-21 Identities = 51/108 (47%), Positives = 69/108 (63%) Frame = +2 Query: 122 KAEKKIAYDQKLCQLLEEYTKVLIAVXDNVGSKQLQEIRKGLRGDSIVLMGKNTLIRRCI 301 K+ K Y KL LLE+Y + I DNV S+Q+ EIR+ LRG+++VLMGKNT++RR + Sbjct: 4 KSANKAGYFDKLKGLLEDYRSIFIVSVDNVSSQQMHEIRQSLRGEAVVLMGKNTMVRRAL 63 Query: 302 KVHSEKTGNKDXLELSNLLVGNVGLIFTKGDLKEVREEVAKYKVGAPA 445 K T + L + GNVG +FT GDLKEVR+++ KV APA Sbjct: 64 KTFVADTPEYE--RLLPFVKGNVGFVFTNGDLKEVRDKILANKVAAPA 109
>RLA0_DROME (P19889) 60S acidic ribosomal protein P0 (DNA-(apurinic or| apyrimidinic site) lyase) (EC 4.2.99.18) (Apurinic-apyrimidinic endonuclease) Length = 317 Score = 98.6 bits (244), Expect = 6e-21 Identities = 53/112 (47%), Positives = 73/112 (65%) Frame = +2 Query: 110 IKRTKAEKKIAYDQKLCQLLEEYTKVLIAVXDNVGSKQLQEIRKGLRGDSIVLMGKNTLI 289 ++ KA K Y K+ +L +E+ K I DNVGSKQ+Q IR LRG ++VLMGKNT++ Sbjct: 2 VRENKAAWKAQYFIKVVELFDEFPKCFIVGADNVGSKQMQNIRTSLRGLAVVLMGKNTMM 61 Query: 290 RRCIKVHSEKTGNKDXLELSNLLVGNVGLIFTKGDLKEVREEVAKYKVGAPA 445 R+ I+ H E N +L + GNVG +FTKGDL EVR+++ + KV APA Sbjct: 62 RKAIRGHLE--NNPQLEKLLPHIKGNVGFVFTKGDLAEVRDKLLESKVRAPA 111
>RLA0_CAEEL (Q93572) 60S acidic ribosomal protein P0| Length = 311 Score = 94.7 bits (234), Expect = 9e-20 Identities = 50/112 (44%), Positives = 73/112 (65%) Frame = +2 Query: 110 IKRTKAEKKIAYDQKLCQLLEEYTKVLIAVXDNVGSKQLQEIRKGLRGDSIVLMGKNTLI 289 ++ ++ K Y KL +L EEY K L+ DNVGSKQ+QEIR+ +RG + +LMGKNT+I Sbjct: 1 VREDRSTWKANYFTKLVELFEEYPKCLLVGVDNVGSKQMQEIRQAMRGHAEILMGKNTMI 60 Query: 290 RRCIKVHSEKTGNKDXLELSNLLVGNVGLIFTKGDLKEVREEVAKYKVGAPA 445 R+ ++ H K N +L +V NVG +FTK DL E+R ++ + + GAPA Sbjct: 61 RKALRGHLGK--NPSLEKLLPHIVENVGFVFTKEDLGEIRSKLLENRKGAPA 110
>RLA0_PODAN (Q9C3Z6) 60S acidic ribosomal protein P0| Length = 314 Score = 94.0 bits (232), Expect = 2e-19 Identities = 49/108 (45%), Positives = 66/108 (61%) Frame = +2 Query: 122 KAEKKIAYDQKLCQLLEEYTKVLIAVXDNVGSKQLQEIRKGLRGDSIVLMGKNTLIRRCI 301 K+ K Y KL LLEEY + I DNV S+Q+ EIR+ LR +VLMGKNT++RR + Sbjct: 4 KSANKAGYFDKLKGLLEEYKSIFIVSVDNVSSQQMHEIRQALRDQGVVLMGKNTMVRRAL 63 Query: 302 KVHSEKTGNKDXLELSNLLVGNVGLIFTKGDLKEVREEVAKYKVGAPA 445 K + + L + GNVG +FT GDLKE+R+++ KV APA Sbjct: 64 KTF--LVDSPEYERLLPFVKGNVGFVFTNGDLKEIRDKILANKVAAPA 109
>RLA0_RANSY (Q9DG68) 60S acidic ribosomal protein P0 (L10E)| Length = 315 Score = 92.8 bits (229), Expect = 3e-19 Identities = 54/112 (48%), Positives = 71/112 (63%), Gaps = 1/112 (0%) Frame = +2 Query: 113 KRTKAEKKIAYDQKLCQLLEEYTKVLIAVXDNVGSKQLQEIRKGLRGDSIVLMGKNTLIR 292 + +A K Y K+ QLL++Y K I DNVGSKQ+Q+IR LRG ++VLMGKNT++R Sbjct: 3 REDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTMMR 62 Query: 293 RCIKVHSEKTGNKDXLE-LSNLLVGNVGLIFTKGDLKEVREEVAKYKVGAPA 445 + I+ H E N LE L + GNVG +FTK DL EVR+ + KV A A Sbjct: 63 KAIRGHLE---NNSALEKLLPHIKGNVGFVFTKEDLAEVRDMLLANKVPASA 111
>RLA0_CHICK (P47826) 60S acidic ribosomal protein P0 (L10E)| Length = 316 Score = 92.0 bits (227), Expect = 6e-19 Identities = 52/112 (46%), Positives = 71/112 (63%), Gaps = 1/112 (0%) Frame = +2 Query: 113 KRTKAEKKIAYDQKLCQLLEEYTKVLIAVXDNVGSKQLQEIRKGLRGDSIVLMGKNTLIR 292 + +A K Y K+ QLL++Y K + DNVGSKQ+Q+IR LRG ++VLMGKNT++R Sbjct: 3 REDRATWKSNYFMKIIQLLDDYPKCFVVGADNVGSKQMQQIRMSLRGKAVVLMGKNTMMR 62 Query: 293 RCIKVHSEKTGNKDXLE-LSNLLVGNVGLIFTKGDLKEVREEVAKYKVGAPA 445 + I+ H E N LE L + GNVG +FTK DL E+R+ + KV A A Sbjct: 63 KAIRGHLE---NNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAA 111
>RLA0_RAT (P19945) 60S acidic ribosomal protein P0 (L10E)| Length = 317 Score = 91.7 bits (226), Expect = 8e-19 Identities = 53/112 (47%), Positives = 71/112 (63%), Gaps = 1/112 (0%) Frame = +2 Query: 113 KRTKAEKKIAYDQKLCQLLEEYTKVLIAVXDNVGSKQLQEIRKGLRGDSIVLMGKNTLIR 292 + +A K Y K+ QLL++Y K I DNVGSKQ+Q+IR LRG ++VLMGKNT++R Sbjct: 3 REDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTMMR 62 Query: 293 RCIKVHSEKTGNKDXLE-LSNLLVGNVGLIFTKGDLKEVREEVAKYKVGAPA 445 + I+ H E N LE L + GNVG +FTK DL E+R+ + KV A A Sbjct: 63 KAIRGHLE---NNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAA 111
>RLA0_MOUSE (P14869) 60S acidic ribosomal protein P0 (L10E)| Length = 317 Score = 91.7 bits (226), Expect = 8e-19 Identities = 53/112 (47%), Positives = 71/112 (63%), Gaps = 1/112 (0%) Frame = +2 Query: 113 KRTKAEKKIAYDQKLCQLLEEYTKVLIAVXDNVGSKQLQEIRKGLRGDSIVLMGKNTLIR 292 + +A K Y K+ QLL++Y K I DNVGSKQ+Q+IR LRG ++VLMGKNT++R Sbjct: 3 REDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTMMR 62 Query: 293 RCIKVHSEKTGNKDXLE-LSNLLVGNVGLIFTKGDLKEVREEVAKYKVGAPA 445 + I+ H E N LE L + GNVG +FTK DL E+R+ + KV A A Sbjct: 63 KAIRGHLE---NNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAA 111
>RLA0_HUMAN (P05388) 60S acidic ribosomal protein P0 (L10E)| Length = 317 Score = 91.7 bits (226), Expect = 8e-19 Identities = 53/112 (47%), Positives = 71/112 (63%), Gaps = 1/112 (0%) Frame = +2 Query: 113 KRTKAEKKIAYDQKLCQLLEEYTKVLIAVXDNVGSKQLQEIRKGLRGDSIVLMGKNTLIR 292 + +A K Y K+ QLL++Y K I DNVGSKQ+Q+IR LRG ++VLMGKNT++R Sbjct: 3 REDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTMMR 62 Query: 293 RCIKVHSEKTGNKDXLE-LSNLLVGNVGLIFTKGDLKEVREEVAKYKVGAPA 445 + I+ H E N LE L + GNVG +FTK DL E+R+ + KV A A Sbjct: 63 KAIRGHLE---NNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAA 111
>RLA0_BOVIN (Q95140) 60S acidic ribosomal protein P0 (L10E) (Fragment)| Length = 309 Score = 90.5 bits (223), Expect = 2e-18 Identities = 52/105 (49%), Positives = 68/105 (64%), Gaps = 1/105 (0%) Frame = +2 Query: 134 KIAYDQKLCQLLEEYTKVLIAVXDNVGSKQLQEIRKGLRGDSIVLMGKNTLIRRCIKVHS 313 K Y K+ QLL++Y K I DNVGSKQ+Q+IR LRG ++VLMGKNT++R+ I+ H Sbjct: 1 KSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTMMRKAIRGHL 60 Query: 314 EKTGNKDXLE-LSNLLVGNVGLIFTKGDLKEVREEVAKYKVGAPA 445 E N LE L + GNVG +FTK DL E+R+ + KV A A Sbjct: 61 E---NNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAA 102
>RLA0_ICTPU (Q90YX1) 60S acidic ribosomal protein P0 (L10E)| Length = 317 Score = 90.1 bits (222), Expect = 2e-18 Identities = 55/112 (49%), Positives = 69/112 (61%), Gaps = 1/112 (0%) Frame = +2 Query: 113 KRTKAEKKIAYDQKLCQLLEEYTKVLIAVXDNVGSKQLQEIRKGLRGDSIVLMGKNTLIR 292 + +A K Y K+ QLL +Y K I DNVGSKQ+Q IR LRG +IVLMGKNT++R Sbjct: 3 REDRATWKSNYFLKIIQLLNDYPKCFIVGADNVGSKQMQTIRLSLRGKAIVLMGKNTMMR 62 Query: 293 RCIKVHSEKTGNKDXLE-LSNLLVGNVGLIFTKGDLKEVREEVAKYKVGAPA 445 + I+ H E N LE L + GNVG +FTK DL EVR+ + KV A A Sbjct: 63 KAIRGHLE---NNPALEKLLPHIRGNVGFVFTKEDLPEVRDMLLANKVPAAA 111
>RLA0_BRARE (Q9PV90) 60S acidic ribosomal protein P0 (L10E)| Length = 319 Score = 88.6 bits (218), Expect = 6e-18 Identities = 53/112 (47%), Positives = 70/112 (62%), Gaps = 1/112 (0%) Frame = +2 Query: 113 KRTKAEKKIAYDQKLCQLLEEYTKVLIAVXDNVGSKQLQEIRKGLRGDSIVLMGKNTLIR 292 + +A K Y K+ QLL+++ K I DNVGSKQ+Q IR LRG ++VLMGKNT++R Sbjct: 3 REDRATWKSNYFLKIIQLLDDFPKCFIVGADNVGSKQMQTIRLSLRGKAVVLMGKNTMMR 62 Query: 293 RCIKVHSEKTGNKDXLE-LSNLLVGNVGLIFTKGDLKEVREEVAKYKVGAPA 445 + I+ H E N LE L + GNVG +FTK DL EVR+ + KV A A Sbjct: 63 KAIRGHLE---NNPALERLLPHIRGNVGFVFTKEDLTEVRDLLLANKVPAAA 111
>RLA0_SCHPO (O74864) 60S acidic ribosomal protein P0| Length = 312 Score = 81.6 bits (200), Expect = 8e-16 Identities = 50/117 (42%), Positives = 67/117 (57%), Gaps = 3/117 (2%) Frame = +2 Query: 104 MAIKRTKAEKKIAYDQKLCQLLEEYTKVLIAVXDNVGSKQLQEIRKGLRGDSIVLMGKNT 283 MAI + E K Y +KL L E+Y + + DNV S+Q+ +RK LRG + ++MGKNT Sbjct: 1 MAISK---ESKAQYFEKLRSLFEKYNSLFVVNIDNVSSQQMHTVRKQLRGTAELIMGKNT 57 Query: 284 LIRRCIKVHSEKTGNKDXLELSNLLV---GNVGLIFTKGDLKEVREEVAKYKVGAPA 445 +IRR ++ D EL LL GNVG +FT DLKEVRE + + APA Sbjct: 58 MIRRAMRGII-----NDMPELERLLPVVRGNVGFVFTNADLKEVRETIIANVIAAPA 109
>RLA0_YEAST (P05317) 60S acidic ribosomal protein P0 (L10E)| Length = 312 Score = 80.9 bits (198), Expect = 1e-15 Identities = 44/106 (41%), Positives = 63/106 (59%) Frame = +2 Query: 128 EKKIAYDQKLCQLLEEYTKVLIAVXDNVGSKQLQEIRKGLRGDSIVLMGKNTLIRRCIKV 307 EKK Y KL + LEEY + + DNV S+Q+ E+RK LRG ++VLMGKNT++RR I+ Sbjct: 6 EKKAEYFAKLREYLEEYKSLFVVGVDNVSSQQMHEVRKELRGRAVVLMGKNTMVRRAIR- 64 Query: 308 HSEKTGNKDXLELSNLLVGNVGLIFTKGDLKEVREEVAKYKVGAPA 445 + D +L + G VG +FT L E++ + +V APA Sbjct: 65 -GFLSDLPDFEKLLPFVKGYVGFVFTNEPLTEIKNVIVSNRVAAPA 109
>RLA0_PLAF8 (Q94660) 60S acidic ribosomal protein P0| Length = 316 Score = 80.5 bits (197), Expect = 2e-15 Identities = 43/106 (40%), Positives = 65/106 (61%) Frame = +2 Query: 113 KRTKAEKKIAYDQKLCQLLEEYTKVLIAVXDNVGSKQLQEIRKGLRGDSIVLMGKNTLIR 292 K +K +KK Y +KL L+++Y+K+LI DNVGS Q+ +RK LRG + +LMGKNT IR Sbjct: 3 KLSKQQKKQMYIEKLSSLIQQYSKILIVHVDNVGSNQMASVRKSLRGKATILMGKNTRIR 62 Query: 293 RCIKVHSEKTGNKDXLELSNLLVGNVGLIFTKGDLKEVREEVAKYK 430 +K + + + +L L+ N+G +F K DL E+R + K Sbjct: 63 TALKKNLQAVPQIE--KLLPLVKLNMGFVFCKDDLSEIRNIILDNK 106
>RLA0_PIG (Q29214) 60S acidic ribosomal protein P0 (L10E) (Fragment)| Length = 93 Score = 77.0 bits (188), Expect = 2e-14 Identities = 42/92 (45%), Positives = 58/92 (63%) Frame = +2 Query: 113 KRTKAEKKIAYDQKLCQLLEEYTKVLIAVXDNVGSKQLQEIRKGLRGDSIVLMGKNTLIR 292 + +A K Y K+ QLL++Y K I DNVGSKQ+Q+IR LRG ++VLMGKNT++R Sbjct: 3 REDRAPWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMXLRGKAVVLMGKNTMMR 62 Query: 293 RCIKVHSEKTGNKDXLELSNLLVGNVGLIFTK 388 + I+ H E N +L + GNVG +F K Sbjct: 63 KAIRGHLE--NNPALGKLLPQIRGNVGFVFXK 92
>RLA0_EIMTE (Q967Y7) 60S acidic ribosomal protein P0| Length = 314 Score = 73.2 bits (178), Expect = 3e-13 Identities = 46/107 (42%), Positives = 62/107 (57%) Frame = +2 Query: 125 AEKKIAYDQKLCQLLEEYTKVLIAVXDNVGSKQLQEIRKGLRGDSIVLMGKNTLIRRCIK 304 A K+ Y +L QL+ E+ +VL+ D+VGSKQL IR LRG + VLMGKNT IR ++ Sbjct: 6 AAKRREYFPRLLQLVLEHPRVLVVSADHVGSKQLAGIRVALRGQATVLMGKNTKIRTALR 65 Query: 305 VHSEKTGNKDXLELSNLLVGNVGLIFTKGDLKEVREEVAKYKVGAPA 445 ++ L L+ NVG IF + D VR V ++KV APA Sbjct: 66 QQLQQ--QPQLQALLPLVRLNVGFIFCRADPAAVRAVVQQHKVPAPA 110
>RLA0_DICDI (P22685) 60S acidic ribosomal protein P0| Length = 305 Score = 73.2 bits (178), Expect = 3e-13 Identities = 41/107 (38%), Positives = 64/107 (59%) Frame = +2 Query: 125 AEKKIAYDQKLCQLLEEYTKVLIAVXDNVGSKQLQEIRKGLRGDSIVLMGKNTLIRRCIK 304 +++K + +K +L Y K+++A D VGS QLQ+IRK +RG VLMGK T+IR+ I+ Sbjct: 6 SKRKKLFIEKATKLFTTYDKMIVAEADFVGSSQLQKIRKSIRGIGAVLMGKKTMIRKVIR 65 Query: 305 VHSEKTGNKDXLELSNLLVGNVGLIFTKGDLKEVREEVAKYKVGAPA 445 ++ D L+ L N +IF K ++ EV+ + +VGAPA Sbjct: 66 DLADSKPELDA--LNTYLKQNTCIIFCKDNIAEVKRVINTQRVGAPA 110
>RLA0_LEICH (P39096) 60S acidic ribosomal protein P0| Length = 322 Score = 66.6 bits (161), Expect = 3e-11 Identities = 39/111 (35%), Positives = 61/111 (54%), Gaps = 7/111 (6%) Frame = +2 Query: 134 KIAYDQKLCQLLEEYTKVLIAVXDNVGSKQLQEIRKGLRGDSIVLMGKNTLIRRCIKVHS 313 K Y+++L L +Y+ VL DNV S+Q+ ++R+G RG + +MGK TL + ++ + Sbjct: 8 KREYEERLVDCLTKYSCVLFVGMDNVRSQQVHDVRRGCRGKAEFIMGKKTLQAKIVEKRA 67 Query: 314 -------EKTGNKDXLELSNLLVGNVGLIFTKGDLKEVREEVAKYKVGAPA 445 E D E NLL GN GLIFT ++E+ + ++V APA Sbjct: 68 QAKDASPEAKPFNDQCEEYNLLSGNTGLIFTNNAVQEITSVLDGHRVKAPA 118
>RLA0_TRYCR (P26796) 60S acidic ribosomal protein P0| Length = 323 Score = 62.0 bits (149), Expect = 6e-10 Identities = 38/114 (33%), Positives = 64/114 (56%), Gaps = 7/114 (6%) Frame = +2 Query: 125 AEKKIAYDQKLCQLLEEYTKVLIAVXDNVGSKQLQEIRKGLRGDSIVLMGKNTLIRRCIK 304 +E K Y+++ L +Y +VL + DNV S+Q+ ++R+ LRG ++MGK TL ++ ++ Sbjct: 5 SEAKREYEERFNGCLTKYGRVLFCLMDNVRSQQVHDVRRDLRGLGELVMGKKTLQKKIVE 64 Query: 305 VHSE--KTGNKDXLELS-----NLLVGNVGLIFTKGDLKEVREEVAKYKVGAPA 445 +E K D L + LL GN LIFT ++ + + K++V APA Sbjct: 65 RRAEDKKASAYDKLLYNTCIEKKLLCGNTALIFTNEEIPVITAVLDKHRVQAPA 118
>RLA0_LEIIN (P39097) 60S acidic ribosomal protein P0| Length = 323 Score = 56.2 bits (134), Expect = 4e-08 Identities = 34/107 (31%), Positives = 56/107 (52%), Gaps = 7/107 (6%) Frame = +2 Query: 134 KIAYDQKLCQLLEEYTKVLIAVXDNVGSKQLQEIRKGLRGDSIVLMGKNTLIRRCIKVHS 313 K Y+++L L +Y+ VL DNV S+Q+ ++ + LR + +MGK TL + ++ + Sbjct: 8 KREYEERLVDCLTKYSCVLFVGMDNVRSQQVHDVGRALRAKAEFMMGKKTLQGKIVEKRA 67 Query: 314 -------EKTGNKDXLELSNLLVGNVGLIFTKGDLKEVREEVAKYKV 433 E D E NLL GN GLIFT ++E+ + ++V Sbjct: 68 QAKDASPEAKHFNDQCEEYNLLSGNTGLIFTNNAVQEITSVLDAHRV 114
>RLA0_METTL (O52705) Acidic ribosomal protein P0 homolog (L10E)| Length = 338 Score = 51.6 bits (122), Expect = 9e-07 Identities = 34/103 (33%), Positives = 56/103 (54%) Frame = +2 Query: 134 KIAYDQKLCQLLEEYTKVLIAVXDNVGSKQLQEIRKGLRGDSIVLMGKNTLIRRCIKVHS 313 KI KL +LL+ V + V ++QLQEIR +RG + M +NTLI R IK + Sbjct: 14 KIEEVNKLKELLKNGQIVALVDMMEVPARQLQEIRDKIRGTMTLKMSRNTLIERAIKEVA 73 Query: 314 EKTGNKDXLELSNLLVGNVGLIFTKGDLKEVREEVAKYKVGAP 442 E+TGN + +L++ + +I T + ++ + + + K AP Sbjct: 74 EETGNPEFAKLADYIDKGAAIITTDMNPFKLYKTLEESKSPAP 116
>RLA0_METKA (Q8TX50) Acidic ribosomal protein P0 homolog (L10E)| Length = 357 Score = 49.7 bits (117), Expect = 3e-06 Identities = 39/117 (33%), Positives = 63/117 (53%), Gaps = 2/117 (1%) Frame = +2 Query: 101 PMAIKRTKAEKKIAYDQKLCQLLEEYTKVLIAVXDNVGSKQLQEIRKGLR-GDSIVLMGK 277 P + AE K ++L +L++EY V + + + + QLQEIR LR D+I+ M + Sbjct: 10 PSGYEPKVAEWKRREVKELKELMDEYENVGLVDLEGIPAPQLQEIRAKLRERDTIIRMSR 69 Query: 278 NTLIRRCIKVHSEKTGNKDXLE-LSNLLVGNVGLIFTKGDLKEVREEVAKYKVGAPA 445 NTL+R ++ EK + LE L + + G V IFT D ++ + + + K APA Sbjct: 70 NTLMRIALE---EKLDERPELEPLLDYIEGPVAFIFTNLDPFKLYKLLEESKASAPA 123
>RLA0_HALSA (P13553) Acidic ribosomal protein P0 homolog (L10E)| Length = 352 Score = 49.3 bits (116), Expect = 4e-06 Identities = 33/98 (33%), Positives = 54/98 (55%), Gaps = 1/98 (1%) Frame = +2 Query: 152 KLCQLLEEYTKVLIAVXDNVGSKQLQEIRKGLRGDSIVLMGKNTLIRRCIKVHSEKTGNK 331 +L LLE Y V + + SKQLQ++R+GL G + + M +NTL+ R + E+ G Sbjct: 22 ELVDLLETYDSVGVVNVTGIPSKQLQDMRRGLHGQAALRMSRNTLLVRAL----EEAG-- 75 Query: 332 DXLE-LSNLLVGNVGLIFTKGDLKEVREEVAKYKVGAP 442 D L+ L+ + G VGL+ T + + +++ K AP Sbjct: 76 DGLDTLTEYVEGEVGLVATNDNPFGLYQQLENSKTPAP 113
>MRT4_YEAST (P33201) mRNA turnover protein 4| Length = 236 Score = 48.1 bits (113), Expect = 1e-05 Identities = 30/105 (28%), Positives = 55/105 (52%) Frame = +2 Query: 113 KRTKAEKKIAYDQKLCQLLEEYTKVLIAVXDNVGSKQLQEIRKGLRGDSIVLMGKNTLIR 292 K+ + K+ +D+ + + L+ Y V + D+V + LQEIR G ++ MGK +++ Sbjct: 17 KKGRENKERIFDE-VREALDTYRYVWVLHLDDVRTPVLQEIRTSWAGSKLI-MGKRKVLQ 74 Query: 293 RCIKVHSEKTGNKDXLELSNLLVGNVGLIFTKGDLKEVREEVAKY 427 + + E+ ++ +LS L G GL+FT D+ V+E Y Sbjct: 75 KALGEKREEEYKENLYQLSKLCSGVTGLLFTDEDVNTVKEYFKSY 119
>MRT4_CANGA (Q6FJ04) mRNA turnover protein 4 homolog| Length = 239 Score = 45.1 bits (105), Expect = 8e-05 Identities = 29/105 (27%), Positives = 54/105 (51%) Frame = +2 Query: 113 KRTKAEKKIAYDQKLCQLLEEYTKVLIAVXDNVGSKQLQEIRKGLRGDSIVLMGKNTLIR 292 K+ + K+ +D+ + + L+ Y V + D+V + LQEIR+ G + LMGK ++ Sbjct: 17 KKGRENKERIFDE-VREALDTYKYVFVLQLDDVRTPVLQEIREAWVGSKL-LMGKRKVLE 74 Query: 293 RCIKVHSEKTGNKDXLELSNLLVGNVGLIFTKGDLKEVREEVAKY 427 + + E+ ++ +L+ G +GL+FT L V+E Y Sbjct: 75 KALGTTREQEYKENLSKLTKYCSGVIGLLFTNETLDTVKEYFEAY 119
>RLA0_METTH (O27717) Acidic ribosomal protein P0 homolog (L10E)| Length = 336 Score = 45.1 bits (105), Expect = 8e-05 Identities = 34/107 (31%), Positives = 57/107 (53%) Frame = +2 Query: 125 AEKKIAYDQKLCQLLEEYTKVLIAVXDNVGSKQLQEIRKGLRGDSIVLMGKNTLIRRCIK 304 AE K Q+L L++ Y V IA ++ ++QLQ++R+ LR +++ M K TLI ++ Sbjct: 5 AEWKKKEVQELHDLIKGYEVVGIANLADIPARQLQKMRQTLRDSALIRMSKKTLISLALE 64 Query: 305 VHSEKTGNKDXLELSNLLVGNVGLIFTKGDLKEVREEVAKYKVGAPA 445 + N D LS+ + G LIFT + ++ + + K APA Sbjct: 65 KAGRELENVD--SLSDYMEGQPALIFTDMNPFKLFKILEDSKTPAPA 109
>RLA0_METVA (P15826) Acidic ribosomal protein P0 homolog (L10E) (ML2)| Length = 336 Score = 44.7 bits (104), Expect = 1e-04 Identities = 29/103 (28%), Positives = 54/103 (52%) Frame = +2 Query: 134 KIAYDQKLCQLLEEYTKVLIAVXDNVGSKQLQEIRKGLRGDSIVLMGKNTLIRRCIKVHS 313 KI L +LL+ + + V + QLQEIR +R + M +NTLI+R ++ + Sbjct: 14 KIEEVNALKELLKSANVIALIDMMEVPAVQLQEIRDKIRDQMTLKMSRNTLIKRAVEEVA 73 Query: 314 EKTGNKDXLELSNLLVGNVGLIFTKGDLKEVREEVAKYKVGAP 442 E+TGN + +L + L ++ T+ + ++ + + + K AP Sbjct: 74 EETGNPEFAKLVDYLDKGAAIVVTEMNPFKLFKTLEESKSPAP 116
>RLA0_METVO (Q9Y8J3) Acidic ribosomal protein P0 homolog (L10E) (Fragment)| Length = 297 Score = 44.3 bits (103), Expect = 1e-04 Identities = 31/106 (29%), Positives = 54/106 (50%) Frame = +2 Query: 125 AEKKIAYDQKLCQLLEEYTKVLIAVXDNVGSKQLQEIRKGLRGDSIVLMGKNTLIRRCIK 304 A K+ L +LL+ + + V S QLQEIR +R + M +NTL++R I+ Sbjct: 11 ASWKVDEVNSLKELLKSGNVIALIDMMEVPSVQLQEIRDTIRDSMTLKMSRNTLMKRAIE 70 Query: 305 VHSEKTGNKDXLELSNLLVGNVGLIFTKGDLKEVREEVAKYKVGAP 442 +E+TGN +L + + LI T+ + ++ + + + K AP Sbjct: 71 EVAEETGNPSFTKLIDCMEKGAALIATEMNPFKLYKTLNESKSPAP 116
>RLA0_HALVO (P41198) Acidic ribosomal protein P0 homolog (L10E)| Length = 350 Score = 43.9 bits (102), Expect = 2e-04 Identities = 29/97 (29%), Positives = 45/97 (46%) Frame = +2 Query: 152 KLCQLLEEYTKVLIAVXDNVGSKQLQEIRKGLRGDSIVLMGKNTLIRRCIKVHSEKTGNK 331 +L +E Y V + + S+QLQ +R+ L G + V M +NTL+ R + N Sbjct: 22 ELVDFIESYESVGVVGVAGIPSRQLQSMRRELHGSAAVRMSRNTLVNRAL-----DEVND 76 Query: 332 DXLELSNLLVGNVGLIFTKGDLKEVREEVAKYKVGAP 442 EL + G V LI T + + +E+ K AP Sbjct: 77 GFEELKEYIAGQVALIGTNDNPFALFKELEASKTPAP 113
>MRT4_NEUCR (Q7S302) mRNA turnover protein 4 homolog| Length = 252 Score = 43.9 bits (102), Expect = 2e-04 Identities = 27/101 (26%), Positives = 47/101 (46%) Frame = +2 Query: 110 IKRTKAEKKIAYDQKLCQLLEEYTKVLIAVXDNVGSKQLQEIRKGLRGDSIVLMGKNTLI 289 + + E+K + + + + Y + DN+ + L+++RK L D + GK L Sbjct: 15 VTKKNREQKEKLFENIRECIPNYQHCFVFSIDNMRNNYLKDVRKELN-DCRIFFGKTKLT 73 Query: 290 RRCIKVHSEKTGNKDXLELSNLLVGNVGLIFTKGDLKEVRE 412 R + E +LS L G+VGLIFT D E+++ Sbjct: 74 ARALGTTPEDAQADGLDKLSKYLSGSVGLIFTNRDPSEIKD 114
>RLA0_SULTO (Q971J2) Acidic ribosomal protein P0 homolog (L10E)| Length = 337 Score = 43.5 bits (101), Expect = 2e-04 Identities = 33/114 (28%), Positives = 58/114 (50%) Frame = +2 Query: 92 VAAPMAIKRTKAEKKIAYDQKLCQLLEEYTKVLIAVXDNVGSKQLQEIRKGLRGDSIVLM 271 + A + +R A+ KI ++L Q L EY ++IA + + +L +IRK +RG + + + Sbjct: 3 IMAVITQERKIAKWKIEEVKELEQKLREYHTIIIANIEGFPADKLHDIRKKMRGMAEIKV 62 Query: 272 GKNTLIRRCIKVHSEKTGNKDXLELSNLLVGNVGLIFTKGDLKEVREEVAKYKV 433 KNTL + K D +L L G IFT + E++ ++K+K+ Sbjct: 63 TKNTLFG-----IAAKNAGLDVSKLEPYLTGPNAFIFTNKNPFEIQLFLSKFKL 111
>RLA0_HALMA (P15825) 50S ribosomal protein L10E (Ribosomal protein L10) (Acidic| ribosomal protein P0 homolog) (L10E) (HMal10) Length = 348 Score = 42.4 bits (98), Expect = 5e-04 Identities = 28/97 (28%), Positives = 50/97 (51%), Gaps = 1/97 (1%) Frame = +2 Query: 155 LCQLLEEYTKVLIAVXDNVGSKQLQEIRKGLRGDSIVLMGKNTLIRRCIKVHSEKTGNKD 334 + +++E Y V + + S+QLQ++R+ L G + + + +NTL+ R + D Sbjct: 23 IVEMIESYESVGVVNIAGIPSRQLQDMRRDLHGTAELRVSRNTLLERAL------DDVDD 76 Query: 335 XLE-LSNLLVGNVGLIFTKGDLKEVREEVAKYKVGAP 442 LE L+ + G VGLI T + + +E+ K AP Sbjct: 77 GLEDLNGYITGQVGLIGTDDNPFSLFQELEASKTPAP 113
>RLA0_SULSO (P96039) Acidic ribosomal protein P0 homolog (L10E) (Ribosomal| protein L10) Length = 338 Score = 40.8 bits (94), Expect = 0.002 Identities = 30/96 (31%), Positives = 49/96 (51%), Gaps = 1/96 (1%) Frame = +2 Query: 104 MAIKRTK-AEKKIAYDQKLCQLLEEYTKVLIAVXDNVGSKQLQEIRKGLRGDSIVLMGKN 280 +A+K+ K A K+ ++L +L++ +LI + + +L EIRK LRG + + + KN Sbjct: 6 LALKQRKVASWKLEEVKELTELIKNSNTILIGNLEGFPADKLHEIRKKLRGKATIKVTKN 65 Query: 281 TLIRRCIKVHSEKTGNKDXLELSNLLVGNVGLIFTK 388 TL + + K D +L L G IFTK Sbjct: 66 TLFK-----IAAKNAGIDIEKLEQYLTGPNVFIFTK 96
>RLA0_METJA (P54049) Acidic ribosomal protein P0 homolog (L10E)| Length = 338 Score = 40.4 bits (93), Expect = 0.002 Identities = 24/71 (33%), Positives = 40/71 (56%), Gaps = 2/71 (2%) Frame = +2 Query: 179 TKVLIAVXD--NVGSKQLQEIRKGLRGDSIVLMGKNTLIRRCIKVHSEKTGNKDXLELSN 352 +K ++A+ D +V + QLQEIR +R + M +NTLI R +K +E+ N EL+N Sbjct: 26 SKPVVAIVDMMDVPAPQLQEIRDKIRDKVKLRMSRNTLIIRALKEAAEELNNPKLAELAN 85 Query: 353 LLVGNVGLIFT 385 + ++ T Sbjct: 86 YVERGAAILVT 96
>RLA0_PYRKO (Q5JH36) Acidic ribosomal protein P0 homolog (L10E)| Length = 340 Score = 40.0 bits (92), Expect = 0.003 Identities = 25/107 (23%), Positives = 56/107 (52%) Frame = +2 Query: 125 AEKKIAYDQKLCQLLEEYTKVLIAVXDNVGSKQLQEIRKGLRGDSIVLMGKNTLIRRCIK 304 AE K ++L +++ Y + + V + L ++R LRG +++ + +NTLI IK Sbjct: 5 AEWKKKEVEELANIIKSYPVIALVDVAGVPAYPLSKMRDKLRGKALLRVSRNTLIELAIK 64 Query: 305 VHSEKTGNKDXLELSNLLVGNVGLIFTKGDLKEVREEVAKYKVGAPA 445 +++ G + +L + + G ++ T+ + ++ + + + K APA Sbjct: 65 RAAQELGQPELEKLIDHIQGGAAILATEMNPFKLYKLLEESKTPAPA 111
>RLA0_SULAC (P35023) Acidic ribosomal protein P0 homolog (L10E) (Ribosomal| protein L10) Length = 335 Score = 38.5 bits (88), Expect = 0.008 Identities = 30/112 (26%), Positives = 54/112 (48%), Gaps = 2/112 (1%) Frame = +2 Query: 104 MAIKRTKAEKKIAYDQ--KLCQLLEEYTKVLIAVXDNVGSKQLQEIRKGLRGDSIVLMGK 277 +A+ TK K D+ +L + L+ + ++IA + + +L EIRK LRG + + + K Sbjct: 4 LAVTTTKKIAKWKVDEVAELTEKLKTHKTIIIANIEGFPADKLHEIRKKLRGKADIKVTK 63 Query: 278 NTLIRRCIKVHSEKTGNKDXLELSNLLVGNVGLIFTKGDLKEVREEVAKYKV 433 N L + K D + L G IFT + E++ ++K+K+ Sbjct: 64 NNLFNIAL-----KNAGYDTKLFESYLTGPNAFIFTDTNPFELQLFLSKFKL 110
>RL10_SYNSC (Q3AGT1) 50S ribosomal protein L10| Length = 175 Score = 38.5 bits (88), Expect = 0.008 Identities = 25/83 (30%), Positives = 42/83 (50%), Gaps = 1/83 (1%) Frame = +2 Query: 152 KLCQLLEEYTKVLIAVXDNVGSKQLQEIRKGLRG-DSIVLMGKNTLIRRCIKVHSEKTGN 328 +L +LL + L+ + K++ ++R LR DS+ + KNTL+RR I G+ Sbjct: 14 ELKELLADAELALVLDFKGLSIKEMSDLRDRLRASDSVCKVTKNTLMRRAI------DGD 67 Query: 329 KDXLELSNLLVGNVGLIFTKGDL 397 + L +LL G + KGD+ Sbjct: 68 SNWASLDSLLTGTNAFVLVKGDV 90
>RLA0_ARCFU (O28781) Acidic ribosomal protein P0 homolog (L10E)| Length = 339 Score = 36.2 bits (82), Expect = 0.038 Identities = 24/91 (26%), Positives = 48/91 (52%) Frame = +2 Query: 107 AIKRTKAEKKIAYDQKLCQLLEEYTKVLIAVXDNVGSKQLQEIRKGLRGDSIVLMGKNTL 286 A++ + E K+ +++ +++ V I NV + Q+Q+IR+ RG + + + KNTL Sbjct: 3 AVRGSPPEYKVRAVEEIKRMISSKPVVAIVSFRNVPAGQMQKIRREFRGKAEIKVVKNTL 62 Query: 287 IRRCIKVHSEKTGNKDXLELSNLLVGNVGLI 379 + R + + G D L+L + L + +I Sbjct: 63 LERAL----DALGG-DYLKLKDYLGDQIAII 88
>RL10_TROWT (Q83FL0) 50S ribosomal protein L10| Length = 166 Score = 35.4 bits (80), Expect = 0.065 Identities = 24/91 (26%), Positives = 44/91 (48%) Frame = +2 Query: 155 LCQLLEEYTKVLIAVXDNVGSKQLQEIRKGLRGDSIVLMGKNTLIRRCIKVHSEKTGNKD 334 L +L + ++ + + QL+ +R LRGD+ L+ KNTL R + +++ G D Sbjct: 10 LVGVLSDAQAIVFTEYRGLSAAQLRALRILLRGDASYLIAKNTLAR----IAAQQVGFND 65 Query: 335 XLELSNLLVGNVGLIFTKGDLKEVREEVAKY 427 E L G ++ GD+ V + + K+ Sbjct: 66 FAE---FLRGPTAIVAVDGDIVSVAKSLRKF 93
>RL10_TROW8 (Q83HB1) 50S ribosomal protein L10| Length = 166 Score = 35.4 bits (80), Expect = 0.065 Identities = 24/91 (26%), Positives = 44/91 (48%) Frame = +2 Query: 155 LCQLLEEYTKVLIAVXDNVGSKQLQEIRKGLRGDSIVLMGKNTLIRRCIKVHSEKTGNKD 334 L +L + ++ + + QL+ +R LRGD+ L+ KNTL R + +++ G D Sbjct: 10 LVGVLSDAQAIVFTEYRGLSAAQLRALRILLRGDASYLIAKNTLAR----IAAQQVGFND 65 Query: 335 XLELSNLLVGNVGLIFTKGDLKEVREEVAKY 427 E L G ++ GD+ V + + K+ Sbjct: 66 FAE---FLRGPTAIVAVDGDIVSVAKSLRKF 93
>MRT4_SCHPO (Q9USZ6) mRNA turnover protein 4 homolog| Length = 241 Score = 35.4 bits (80), Expect = 0.065 Identities = 27/93 (29%), Positives = 46/93 (49%) Frame = +2 Query: 128 EKKIAYDQKLCQLLEEYTKVLIAVXDNVGSKQLQEIRKGLRGDSIVLMGKNTLIRRCIKV 307 E K A + Q L+ + + I N+ + L+ IR +G S + MGK ++ + + Sbjct: 21 EGKAALFSGVQQSLDSFDYMWIFDVTNMRNTYLKRIRDDWKG-SRIFMGKTKVMAKALGH 79 Query: 308 HSEKTGNKDXLELSNLLVGNVGLIFTKGDLKEV 406 E+ ++ +L+ LL G VGL+FT EV Sbjct: 80 TPEEEHAENVSKLTKLLHGAVGLLFTNSKPDEV 112
>MRT4_MOUSE (Q9D0I8) mRNA turnover protein 4 homolog| Length = 239 Score = 35.0 bits (79), Expect = 0.084 Identities = 28/94 (29%), Positives = 48/94 (51%), Gaps = 1/94 (1%) Frame = +2 Query: 149 QKLCQLLEEYTKVLIAVXDNVGSKQLQEIRKGLRGDSIVLMGKNTLIRRCIKVHSEKTGN 328 ++L + ++ Y + I N+ + +L++IR + S + GKN ++ + S Sbjct: 28 EELRKCVDTYKYLFIFSVANMRNSKLKDIRNAWK-HSRMFFGKNKVMMVALG-RSPSDEY 85 Query: 329 KDXL-ELSNLLVGNVGLIFTKGDLKEVREEVAKY 427 KD L ++S L G VGL+FT +EV E KY Sbjct: 86 KDNLHQVSKKLRGEVGLLFTNRTKEEVNEWFTKY 119
>MRT4_HUMAN (Q9UKD2) mRNA turnover protein 4 homolog| Length = 239 Score = 35.0 bits (79), Expect = 0.084 Identities = 28/94 (29%), Positives = 48/94 (51%), Gaps = 1/94 (1%) Frame = +2 Query: 149 QKLCQLLEEYTKVLIAVXDNVGSKQLQEIRKGLRGDSIVLMGKNTLIRRCIKVHSEKTGN 328 ++L + ++ Y + I N+ + +L++IR + S + GKN ++ + S Sbjct: 28 EELRKCVDTYKYLFIFSVANMRNSKLKDIRNAWK-HSRMFFGKNKVMMVALG-RSPSDEY 85 Query: 329 KDXL-ELSNLLVGNVGLIFTKGDLKEVREEVAKY 427 KD L ++S L G VGL+FT +EV E KY Sbjct: 86 KDNLHQVSKRLRGEVGLLFTNRTKEEVNEWFTKY 119
>RL10_THEFY (Q47LI3) 50S ribosomal protein L10| Length = 175 Score = 33.1 bits (74), Expect = 0.32 Identities = 28/93 (30%), Positives = 45/93 (48%) Frame = +2 Query: 125 AEKKIAYDQKLCQLLEEYTKVLIAVXDNVGSKQLQEIRKGLRGDSIVLMGKNTLIRRCIK 304 AE K + +L EY + +A QL E+R+ L ++ + KNTL K Sbjct: 11 AELKEEFQTSSGAVLTEYRGLTVA--------QLTELRRSLGQNARFRVAKNTL----TK 58 Query: 305 VHSEKTGNKDXLELSNLLVGNVGLIFTKGDLKE 403 + +++ G D E+ +LL G + F KGD+ E Sbjct: 59 IAAKEAGVTDS-EVLDLLKGPSAIAFVKGDVVE 90
>RL10_SYNJB (Q2JM49) 50S ribosomal protein L10| Length = 187 Score = 32.7 bits (73), Expect = 0.42 Identities = 25/90 (27%), Positives = 40/90 (44%), Gaps = 1/90 (1%) Frame = +2 Query: 131 KKIAYDQKLCQLLEEYTKVLIAVXDNVGSKQLQEIRKGLR-GDSIVLMGKNTLIRRCIKV 307 KK K+ LL+ VL+ + ++ ++R LR DS+ ++ KNTL+RR I Sbjct: 8 KKAEIVDKVRSLLQASQMVLVIDYKGLTVAEMDQLRAELRKSDSVCMVVKNTLMRRAIAD 67 Query: 308 HSEKTGNKDXLELSNLLVGNVGLIFTKGDL 397 G + L G I +GD+ Sbjct: 68 QKAWAG------IIPFLAGPTAFILIRGDI 91
>RL10_MYCTU (P66044) 50S ribosomal protein L10| Length = 178 Score = 31.6 bits (70), Expect = 0.93 Identities = 26/91 (28%), Positives = 40/91 (43%) Frame = +2 Query: 122 KAEKKIAYDQKLCQLLEEYTKVLIAVXDNVGSKQLQEIRKGLRGDSIVLMGKNTLIRRCI 301 +A+K A Q +E T LI + L E+R+ L G + + KNTLI+R Sbjct: 3 RADKATAVADIAAQF-KESTATLITEYRGLTVANLAELRRSLTGSATYAVAKNTLIKRA- 60 Query: 302 KVHSEKTGNKDXLELSNLLVGNVGLIFTKGD 394 + + G + L L VG + F G+ Sbjct: 61 ---ASEAGIEG---LDELFVGPTAIAFVTGE 85
>RL10_MYCBO (P66045) 50S ribosomal protein L10| Length = 178 Score = 31.6 bits (70), Expect = 0.93 Identities = 26/91 (28%), Positives = 40/91 (43%) Frame = +2 Query: 122 KAEKKIAYDQKLCQLLEEYTKVLIAVXDNVGSKQLQEIRKGLRGDSIVLMGKNTLIRRCI 301 +A+K A Q +E T LI + L E+R+ L G + + KNTLI+R Sbjct: 3 RADKATAVADIAAQF-KESTATLITEYRGLTVANLAELRRSLTGSATYAVAKNTLIKRA- 60 Query: 302 KVHSEKTGNKDXLELSNLLVGNVGLIFTKGD 394 + + G + L L VG + F G+ Sbjct: 61 ---ASEAGIEG---LDELFVGPTAIAFVTGE 85
>RL10_NOCFA (Q5YPC7) 50S ribosomal protein L10| Length = 176 Score = 31.2 bits (69), Expect = 1.2 Identities = 23/91 (25%), Positives = 44/91 (48%) Frame = +2 Query: 122 KAEKKIAYDQKLCQLLEEYTKVLIAVXDNVGSKQLQEIRKGLRGDSIVLMGKNTLIRRCI 301 KAEK A + + + + T ++ + +L E+R+ L ++ + KNTL++R Sbjct: 3 KAEKVTAVAE-IAEQFKSSTATVVTEYRGLSVGKLTELRRALGAEATYSVAKNTLVKRA- 60 Query: 302 KVHSEKTGNKDXLELSNLLVGNVGLIFTKGD 394 + + G + L +L VG + F KG+ Sbjct: 61 ---AAEAGVEG---LDDLFVGPTAITFIKGE 85
>RL10_CORGL (Q8NT29) 50S ribosomal protein L10| Length = 171 Score = 31.2 bits (69), Expect = 1.2 Identities = 27/101 (26%), Positives = 46/101 (45%) Frame = +2 Query: 125 AEKKIAYDQKLCQLLEEYTKVLIAVXDNVGSKQLQEIRKGLRGDSIVLMGKNTLIRRCIK 304 AE K + + +L EY + +A Q E+RK L D + KNTL +K Sbjct: 11 AELKARFAETDTVVLTEYRGLTVA--------QTTELRKALGFDVQYSVAKNTL----VK 58 Query: 305 VHSEKTGNKDXLELSNLLVGNVGLIFTKGDLKEVREEVAKY 427 + + + G + L +LL G + F KG+ + + + K+ Sbjct: 59 IAANEAGVEG---LDDLLTGPTAVAFIKGEAVDTAKVLKKF 96
>RL10_COREF (Q8FSA1) 50S ribosomal protein L10| Length = 171 Score = 31.2 bits (69), Expect = 1.2 Identities = 26/101 (25%), Positives = 47/101 (46%) Frame = +2 Query: 125 AEKKIAYDQKLCQLLEEYTKVLIAVXDNVGSKQLQEIRKGLRGDSIVLMGKNTLIRRCIK 304 AE K + + +L EY + +A Q E+R+ L D + KNTL +K Sbjct: 11 AELKAQFAETDSIVLTEYRGLTVA--------QTTELRRALGDDVQYSVAKNTL----VK 58 Query: 305 VHSEKTGNKDXLELSNLLVGNVGLIFTKGDLKEVREEVAKY 427 + +++ G + L +LL G + F KG+ + + + K+ Sbjct: 59 IAAQEAGVEG---LDDLLTGPTAVAFIKGEAVDTAKVLKKF 96
>RL10_PROAC (Q6A6K4) 50S ribosomal protein L10| Length = 204 Score = 30.8 bits (68), Expect = 1.6 Identities = 26/106 (24%), Positives = 47/106 (44%) Frame = +2 Query: 125 AEKKIAYDQKLCQLLEEYTKVLIAVXDNVGSKQLQEIRKGLRGDSIVLMGKNTLIRRCIK 304 AE K + +L EY + ++ L+++R+ L D+ + KNTL R Sbjct: 11 AELKEKFSSAGATVLTEYRGLSVSA--------LKDLRRSLGSDATYAVAKNTLTR---- 58 Query: 305 VHSEKTGNKDXLELSNLLVGNVGLIFTKGDLKEVREEVAKYKVGAP 442 + +++ G + L + LVG L F GD+ V + + + P Sbjct: 59 IAAKEAGIEG---LDDQLVGPTALAFINGDVASVAKGLKNFAKDNP 101
>RL10_CORDI (Q6NJG6) 50S ribosomal protein L10| Length = 171 Score = 29.6 bits (65), Expect = 3.5 Identities = 19/69 (27%), Positives = 36/69 (52%) Frame = +2 Query: 221 QLQEIRKGLRGDSIVLMGKNTLIRRCIKVHSEKTGNKDXLELSNLLVGNVGLIFTKGDLK 400 Q+ E+R+ L D + KNTLI K+ +++ G + L ++L G + F KG+ Sbjct: 35 QITELRRALGSDVQYSVAKNTLI----KLAAKEAGIEG---LDDILTGPTAVAFIKGEAV 87 Query: 401 EVREEVAKY 427 + + + K+ Sbjct: 88 DAAKAMKKF 96
>RL10_MYCPA (Q73SE9) 50S ribosomal protein L10| Length = 196 Score = 28.9 bits (63), Expect = 6.0 Identities = 20/80 (25%), Positives = 35/80 (43%) Frame = +2 Query: 155 LCQLLEEYTKVLIAVXDNVGSKQLQEIRKGLRGDSIVLMGKNTLIRRCIKVHSEKTGNKD 334 + + +E T LI + L E+R+ L G + + KNTL++R + + G + Sbjct: 13 IAEQFKEATATLITEYRGLTVANLAELRRSLSGAATYSVAKNTLVKRA----ASEAGIEG 68 Query: 335 XLELSNLLVGNVGLIFTKGD 394 L L G + F G+ Sbjct: 69 ---LDELFAGPTAIAFVTGE 85
>PSPC_HUMAN (P11686) Pulmonary surfactant-associated protein C precursor (SP-C)| (SP5) (Pulmonary surfactant-associated proteolipid SPL(Val)) Length = 197 Score = 28.9 bits (63), Expect = 6.0 Identities = 14/51 (27%), Positives = 25/51 (49%) Frame = +1 Query: 142 VRPEALPVARGVHQGAHRRRRQCRLQAAPGDPQGSPR*LHRAHGQEHPDPP 294 + PE++P +++ H + +C LQA P P L +A G++ P Sbjct: 126 IAPESIPSLEALNRKVHNFQMECSLQAKPAVPTSK---LGQAEGRDAGSAP 173
>SYA_MYCGE (P47534) Alanyl-tRNA synthetase (EC 6.1.1.7) (Alanine--tRNA ligase)| (AlaRS) Length = 900 Score = 28.9 bits (63), Expect = 6.0 Identities = 18/51 (35%), Positives = 29/51 (56%) Frame = +2 Query: 140 AYDQKLCQLLEEYTKVLIAVXDNVGSKQLQEIRKGLRGDSIVLMGKNTLIR 292 A +QKL QL E KVL + ++ +L+E+++ L D +L K T +R Sbjct: 716 AENQKLIQLKSELEKVLSLIDSSIFKVELKELQQRL--DKFILPEKITQLR 764
>RL10_CORJK (Q4JT29) 50S ribosomal protein L10| Length = 171 Score = 28.5 bits (62), Expect = 7.9 Identities = 25/90 (27%), Positives = 41/90 (45%), Gaps = 1/90 (1%) Frame = +2 Query: 128 EKKIAYDQKLCQLLEEYTKVLIAVXDNVGSKQLQEIRKGLRGDSIVLMGKNTLIRRCIKV 307 E K ++Q LL EY + +A + E+R+ L D + KNT+ IK+ Sbjct: 12 ELKARFEQAQSTLLTEYRGLSVA--------ETTELRRALGSDVTYSVAKNTM----IKL 59 Query: 308 HSEKTGNKDXLEL-SNLLVGNVGLIFTKGD 394 + + G +EL +LL G + F G+ Sbjct: 60 AAREAG----IELDESLLTGPTAIAFVNGE 85
>BRCA2_RAT (O35923) Breast cancer type 2 susceptibility protein homolog (Fanconi| anemia group D1 protein homolog) Length = 3343 Score = 28.5 bits (62), Expect = 7.9 Identities = 16/51 (31%), Positives = 26/51 (50%) Frame = +2 Query: 209 VGSKQLQEIRKGLRGDSIVLMGKNTLIRRCIKVHSEKTGNKDXLELSNLLV 361 VG L + +K LR S L +NT+ +C+K H+E E S +++ Sbjct: 1655 VGESSLSKGKKWLREQSDKLGTRNTIEIQCVKEHTEDFAGNALYEHSLVII 1705 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 48,146,620 Number of Sequences: 219361 Number of extensions: 760401 Number of successful extensions: 3074 Number of sequences better than 10.0: 67 Number of HSP's better than 10.0 without gapping: 2992 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3052 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2677159704 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
