| Clone Name | baal9p15 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_479728.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2008 Score = 557 bits (281), Expect = e-155 Identities = 446/501 (89%) Strand = Plus / Plus Query: 1 caaatagttttagagaacttagaaaccaagaaaattgttcttgtccacggggaaggattt 60 ||||| |||||||||||||||||||||||||||||||||||||| || || ||||| ||| Sbjct: 881 caaatcgttttagagaacttagaaaccaagaaaattgttcttgttcatggagaagggttt 940 Query: 61 ggtgcttggtgttggtacaagaccatctctctcttggaggaagctggcctcgatcctgtt 120 |||||||||||||||||||||||||| |||||||||||||||||||| || |||||| || Sbjct: 941 ggtgcttggtgttggtacaagaccatttctctcttggaggaagctggtcttgatcctatt 1000 Query: 121 gccttagatctcacaggttcaggcatagaccacactgatacaaacagcatagctacattg 180 |||||||||||||||||||| || |||||| | |||| |||||||||||||||||||| Sbjct: 1001 gccttagatctcacaggttctggtatagacaatgctgacacaaacagcatagctacatta 1060 Query: 181 gaagagtactccaaaccactaattgattacctcagtaaactccctgagaacgagaaggtt 240 | ||| |||||||| || |||| || ||||||| |||||| |||||||| ||||||||| Sbjct: 1061 gcagattactccaagcccttaatcgactacctcaataaacttcctgagaatgagaaggtt 1120 Query: 241 gttttggtcggtcatagttgtggaggtgcaagtgtgtcatatgccttagaacactgccca 300 |||||||||| |||||||||||||||||||||||||||||||| |||||||| ||||| Sbjct: 1121 attttggtcggccatagttgtggaggtgcaagtgtgtcatatgcgttagaacaatgcccc 1180 Query: 301 aaaaagatctcaaaggctgtattccttactgccacaatggtaaaggatagccagaggccc 360 |||||||| ||||||||| |||| ||||| || ||||||||||| ||| ||||||||||| Sbjct: 1181 aaaaagatatcaaaggctatatttcttaccgctacaatggtaaaagatggccagaggccc 1240 Query: 361 ttcgatgtgttctctgaagagcttgcgtcggcagatgttttcttgcaagaatcacagtat 420 || || ||||||||||| || || || || ||||||||||||||||||||||||||| | Sbjct: 1241 tttgacgtgttctctgaggaactcgcatctgcagatgttttcttgcaagaatcacagctt 1300 Query: 421 ttactttatggaaatgggaaggacaagcctccaaccgggctcaggtttgacaagcagcag 480 ||| |||| |||||||| |||||||||||||| || ||||||| ||||||||| |||||| Sbjct: 1301 ttaatttacggaaatggtaaggacaagcctcctactgggctcatgtttgacaaacagcag 1360 Query: 481 atcaaggggttatatttcaac 501 ||||||||| ||||||||||| Sbjct: 1361 atcaaggggctatatttcaac 1381
>ref|XM_507092.1| PREDICTED Oryza sativa (japonica cultivar-group), P0007D08.23 mRNA Length = 2338 Score = 557 bits (281), Expect = e-155 Identities = 446/501 (89%) Strand = Plus / Plus Query: 1 caaatagttttagagaacttagaaaccaagaaaattgttcttgtccacggggaaggattt 60 ||||| |||||||||||||||||||||||||||||||||||||| || || ||||| ||| Sbjct: 1211 caaatcgttttagagaacttagaaaccaagaaaattgttcttgttcatggagaagggttt 1270 Query: 61 ggtgcttggtgttggtacaagaccatctctctcttggaggaagctggcctcgatcctgtt 120 |||||||||||||||||||||||||| |||||||||||||||||||| || |||||| || Sbjct: 1271 ggtgcttggtgttggtacaagaccatttctctcttggaggaagctggtcttgatcctatt 1330 Query: 121 gccttagatctcacaggttcaggcatagaccacactgatacaaacagcatagctacattg 180 |||||||||||||||||||| || |||||| | |||| |||||||||||||||||||| Sbjct: 1331 gccttagatctcacaggttctggtatagacaatgctgacacaaacagcatagctacatta 1390 Query: 181 gaagagtactccaaaccactaattgattacctcagtaaactccctgagaacgagaaggtt 240 | ||| |||||||| || |||| || ||||||| |||||| |||||||| ||||||||| Sbjct: 1391 gcagattactccaagcccttaatcgactacctcaataaacttcctgagaatgagaaggtt 1450 Query: 241 gttttggtcggtcatagttgtggaggtgcaagtgtgtcatatgccttagaacactgccca 300 |||||||||| |||||||||||||||||||||||||||||||| |||||||| ||||| Sbjct: 1451 attttggtcggccatagttgtggaggtgcaagtgtgtcatatgcgttagaacaatgcccc 1510 Query: 301 aaaaagatctcaaaggctgtattccttactgccacaatggtaaaggatagccagaggccc 360 |||||||| ||||||||| |||| ||||| || ||||||||||| ||| ||||||||||| Sbjct: 1511 aaaaagatatcaaaggctatatttcttaccgctacaatggtaaaagatggccagaggccc 1570 Query: 361 ttcgatgtgttctctgaagagcttgcgtcggcagatgttttcttgcaagaatcacagtat 420 || || ||||||||||| || || || || ||||||||||||||||||||||||||| | Sbjct: 1571 tttgacgtgttctctgaggaactcgcatctgcagatgttttcttgcaagaatcacagctt 1630 Query: 421 ttactttatggaaatgggaaggacaagcctccaaccgggctcaggtttgacaagcagcag 480 ||| |||| |||||||| |||||||||||||| || ||||||| ||||||||| |||||| Sbjct: 1631 ttaatttacggaaatggtaaggacaagcctcctactgggctcatgtttgacaaacagcag 1690 Query: 481 atcaaggggttatatttcaac 501 ||||||||| ||||||||||| Sbjct: 1691 atcaaggggctatatttcaac 1711
>dbj|AK073752.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033068G24, full insert sequence Length = 2337 Score = 557 bits (281), Expect = e-155 Identities = 446/501 (89%) Strand = Plus / Plus Query: 1 caaatagttttagagaacttagaaaccaagaaaattgttcttgtccacggggaaggattt 60 ||||| |||||||||||||||||||||||||||||||||||||| || || ||||| ||| Sbjct: 1210 caaatcgttttagagaacttagaaaccaagaaaattgttcttgttcatggagaagggttt 1269 Query: 61 ggtgcttggtgttggtacaagaccatctctctcttggaggaagctggcctcgatcctgtt 120 |||||||||||||||||||||||||| |||||||||||||||||||| || |||||| || Sbjct: 1270 ggtgcttggtgttggtacaagaccatttctctcttggaggaagctggtcttgatcctatt 1329 Query: 121 gccttagatctcacaggttcaggcatagaccacactgatacaaacagcatagctacattg 180 |||||||||||||||||||| || |||||| | |||| |||||||||||||||||||| Sbjct: 1330 gccttagatctcacaggttctggtatagacaatgctgacacaaacagcatagctacatta 1389 Query: 181 gaagagtactccaaaccactaattgattacctcagtaaactccctgagaacgagaaggtt 240 | ||| |||||||| || |||| || ||||||| |||||| |||||||| ||||||||| Sbjct: 1390 gcagattactccaagcccttaatcgactacctcaataaacttcctgagaatgagaaggtt 1449 Query: 241 gttttggtcggtcatagttgtggaggtgcaagtgtgtcatatgccttagaacactgccca 300 |||||||||| |||||||||||||||||||||||||||||||| |||||||| ||||| Sbjct: 1450 attttggtcggccatagttgtggaggtgcaagtgtgtcatatgcgttagaacaatgcccc 1509 Query: 301 aaaaagatctcaaaggctgtattccttactgccacaatggtaaaggatagccagaggccc 360 |||||||| ||||||||| |||| ||||| || ||||||||||| ||| ||||||||||| Sbjct: 1510 aaaaagatatcaaaggctatatttcttaccgctacaatggtaaaagatggccagaggccc 1569 Query: 361 ttcgatgtgttctctgaagagcttgcgtcggcagatgttttcttgcaagaatcacagtat 420 || || ||||||||||| || || || || ||||||||||||||||||||||||||| | Sbjct: 1570 tttgacgtgttctctgaggaactcgcatctgcagatgttttcttgcaagaatcacagctt 1629 Query: 421 ttactttatggaaatgggaaggacaagcctccaaccgggctcaggtttgacaagcagcag 480 ||| |||| |||||||| |||||||||||||| || ||||||| ||||||||| |||||| Sbjct: 1630 ttaatttacggaaatggtaaggacaagcctcctactgggctcatgtttgacaaacagcag 1689 Query: 481 atcaaggggttatatttcaac 501 ||||||||| ||||||||||| Sbjct: 1690 atcaaggggctatatttcaac 1710
>dbj|AK071992.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013091K21, full insert sequence Length = 2008 Score = 549 bits (277), Expect = e-153 Identities = 445/501 (88%) Strand = Plus / Plus Query: 1 caaatagttttagagaacttagaaaccaagaaaattgttcttgtccacggggaaggattt 60 ||||| |||||||||||||||||||||||||||||||||||||| || || ||||| ||| Sbjct: 881 caaatcgttttagagaacttagaaaccaagaaaattgttcttgttcatggagaagggttt 940 Query: 61 ggtgcttggtgttggtacaagaccatctctctcttggaggaagctggcctcgatcctgtt 120 |||||||||||||||||||||||||| |||||||||||||||||||| || |||||| || Sbjct: 941 ggtgcttggtgttggtacaagaccatttctctcttggaggaagctggtcttgatcctatt 1000 Query: 121 gccttagatctcacaggttcaggcatagaccacactgatacaaacagcatagctacattg 180 |||||||||||||||||||| || |||||| | |||| |||||||||||||||||||| Sbjct: 1001 gccttagatctcacaggttctggtatagacaatgctgacacaaacagcatagctacatta 1060 Query: 181 gaagagtactccaaaccactaattgattacctcagtaaactccctgagaacgagaaggtt 240 | ||| |||||||| || |||| || ||||||| |||||| |||||||| ||||||||| Sbjct: 1061 gcagattactccaagcccttaatcgactacctcaataaacttcctgagaatgagaaggtt 1120 Query: 241 gttttggtcggtcatagttgtggaggtgcaagtgtgtcatatgccttagaacactgccca 300 |||||||||| ||||| |||||||||||||||||||||||||| |||||||| ||||| Sbjct: 1121 attttggtcggccataggtgtggaggtgcaagtgtgtcatatgcgttagaacaatgcccc 1180 Query: 301 aaaaagatctcaaaggctgtattccttactgccacaatggtaaaggatagccagaggccc 360 |||||||| ||||||||| |||| ||||| || ||||||||||| ||| ||||||||||| Sbjct: 1181 aaaaagatatcaaaggctatatttcttaccgctacaatggtaaaagatggccagaggccc 1240 Query: 361 ttcgatgtgttctctgaagagcttgcgtcggcagatgttttcttgcaagaatcacagtat 420 || || ||||||||||| || || || || ||||||||||||||||||||||||||| | Sbjct: 1241 tttgacgtgttctctgaggaactcgcatctgcagatgttttcttgcaagaatcacagctt 1300 Query: 421 ttactttatggaaatgggaaggacaagcctccaaccgggctcaggtttgacaagcagcag 480 ||| |||| |||||||| |||||||||||||| || ||||||| ||||||||| |||||| Sbjct: 1301 ttaatttacggaaatggtaaggacaagcctcctactgggctcatgtttgacaaacagcag 1360 Query: 481 atcaaggggttatatttcaac 501 ||||||||| ||||||||||| Sbjct: 1361 atcaaggggctatatttcaac 1381
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 268 bits (135), Expect = 2e-68 Identities = 213/239 (89%) Strand = Plus / Minus Query: 1 caaatagttttagagaacttagaaaccaagaaaattgttcttgtccacggggaaggattt 60 ||||| |||||||||||||||||||||||||||||||||||||| || || ||||| ||| Sbjct: 514741 caaatcgttttagagaacttagaaaccaagaaaattgttcttgttcatggagaagggttt 514682 Query: 61 ggtgcttggtgttggtacaagaccatctctctcttggaggaagctggcctcgatcctgtt 120 |||||||||||||||||||||||||| |||||||||||||||||||| || |||||| || Sbjct: 514681 ggtgcttggtgttggtacaagaccatttctctcttggaggaagctggtcttgatcctatt 514622 Query: 121 gccttagatctcacaggttcaggcatagaccacactgatacaaacagcatagctacattg 180 |||||||||||||||||||| || |||||| | |||| |||||||||||||||||||| Sbjct: 514621 gccttagatctcacaggttctggtatagacaatgctgacacaaacagcatagctacatta 514562 Query: 181 gaagagtactccaaaccactaattgattacctcagtaaactccctgagaacgagaaggt 239 | ||| |||||||| || |||| || ||||||| |||||| |||||||| |||||||| Sbjct: 514561 gcagattactccaagcccttaatcgactacctcaataaacttcctgagaatgagaaggt 514503 Score = 170 bits (86), Expect = 3e-39 Identities = 128/142 (90%) Strand = Plus / Minus Query: 236 aggttgttttggtcggtcatagttgtggaggtgcaagtgtgtcatatgccttagaacact 295 ||||| |||||||||| |||||||||||||||||||||||||||||||| |||||||| | Sbjct: 514419 aggttattttggtcggccatagttgtggaggtgcaagtgtgtcatatgcgttagaacaat 514360 Query: 296 gcccaaaaaagatctcaaaggctgtattccttactgccacaatggtaaaggatagccaga 355 |||| |||||||| ||||||||| |||| ||||| || ||||||||||| ||| |||||| Sbjct: 514359 gccccaaaaagatatcaaaggctatatttcttaccgctacaatggtaaaagatggccaga 514300 Query: 356 ggcccttcgatgtgttctctga 377 ||||||| || ||||||||||| Sbjct: 514299 ggccctttgacgtgttctctga 514278 Score = 141 bits (71), Expect = 3e-30 Identities = 101/111 (90%) Strand = Plus / Minus Query: 391 gcagatgttttcttgcaagaatcacagtatttactttatggaaatgggaaggacaagcct 450 ||||||||||||||||||||||||||| |||| |||| |||||||| |||||||||||| Sbjct: 514180 gcagatgttttcttgcaagaatcacagcttttaatttacggaaatggtaaggacaagcct 514121 Query: 451 ccaaccgggctcaggtttgacaagcagcagatcaaggggttatatttcaac 501 || || ||||||| ||||||||| ||||||||||||||| ||||||||||| Sbjct: 514120 cctactgggctcatgtttgacaaacagcagatcaaggggctatatttcaac 514070
>dbj|AP004584.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0007D08 Length = 183142 Score = 268 bits (135), Expect = 2e-68 Identities = 213/239 (89%) Strand = Plus / Minus Query: 1 caaatagttttagagaacttagaaaccaagaaaattgttcttgtccacggggaaggattt 60 ||||| |||||||||||||||||||||||||||||||||||||| || || ||||| ||| Sbjct: 104701 caaatcgttttagagaacttagaaaccaagaaaattgttcttgttcatggagaagggttt 104642 Query: 61 ggtgcttggtgttggtacaagaccatctctctcttggaggaagctggcctcgatcctgtt 120 |||||||||||||||||||||||||| |||||||||||||||||||| || |||||| || Sbjct: 104641 ggtgcttggtgttggtacaagaccatttctctcttggaggaagctggtcttgatcctatt 104582 Query: 121 gccttagatctcacaggttcaggcatagaccacactgatacaaacagcatagctacattg 180 |||||||||||||||||||| || |||||| | |||| |||||||||||||||||||| Sbjct: 104581 gccttagatctcacaggttctggtatagacaatgctgacacaaacagcatagctacatta 104522 Query: 181 gaagagtactccaaaccactaattgattacctcagtaaactccctgagaacgagaaggt 239 | ||| |||||||| || |||| || ||||||| |||||| |||||||| |||||||| Sbjct: 104521 gcagattactccaagcccttaatcgactacctcaataaacttcctgagaatgagaaggt 104463 Score = 170 bits (86), Expect = 3e-39 Identities = 128/142 (90%) Strand = Plus / Minus Query: 236 aggttgttttggtcggtcatagttgtggaggtgcaagtgtgtcatatgccttagaacact 295 ||||| |||||||||| |||||||||||||||||||||||||||||||| |||||||| | Sbjct: 104379 aggttattttggtcggccatagttgtggaggtgcaagtgtgtcatatgcgttagaacaat 104320 Query: 296 gcccaaaaaagatctcaaaggctgtattccttactgccacaatggtaaaggatagccaga 355 |||| |||||||| ||||||||| |||| ||||| || ||||||||||| ||| |||||| Sbjct: 104319 gccccaaaaagatatcaaaggctatatttcttaccgctacaatggtaaaagatggccaga 104260 Query: 356 ggcccttcgatgtgttctctga 377 ||||||| || ||||||||||| Sbjct: 104259 ggccctttgacgtgttctctga 104238 Score = 141 bits (71), Expect = 3e-30 Identities = 101/111 (90%) Strand = Plus / Minus Query: 391 gcagatgttttcttgcaagaatcacagtatttactttatggaaatgggaaggacaagcct 450 ||||||||||||||||||||||||||| |||| |||| |||||||| |||||||||||| Sbjct: 104140 gcagatgttttcttgcaagaatcacagcttttaatttacggaaatggtaaggacaagcct 104081 Query: 451 ccaaccgggctcaggtttgacaagcagcagatcaaggggttatatttcaac 501 || || ||||||| ||||||||| ||||||||||||||| ||||||||||| Sbjct: 104080 cctactgggctcatgtttgacaaacagcagatcaaggggctatatttcaac 104030
>ref|XM_479077.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1134 Score = 60.0 bits (30), Expect = 7e-06 Identities = 45/50 (90%) Strand = Plus / Plus Query: 34 attgttcttgtccacggggaaggatttggtgcttggtgttggtacaagac 83 ||||||||||| || || | ||| |||||||||||||||||||||||||| Sbjct: 115 attgttcttgttcatggaggaggttttggtgcttggtgttggtacaagac 164
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 60.0 bits (30), Expect = 7e-06 Identities = 45/50 (90%) Strand = Plus / Plus Query: 34 attgttcttgtccacggggaaggatttggtgcttggtgttggtacaagac 83 ||||||||||| || || | ||| |||||||||||||||||||||||||| Sbjct: 24648023 attgttcttgttcatggaggaggttttggtgcttggtgttggtacaagac 24648072
>dbj|AP005809.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBb0039M16 Length = 133229 Score = 60.0 bits (30), Expect = 7e-06 Identities = 45/50 (90%) Strand = Plus / Plus Query: 34 attgttcttgtccacggggaaggatttggtgcttggtgttggtacaagac 83 ||||||||||| || || | ||| |||||||||||||||||||||||||| Sbjct: 104090 attgttcttgttcatggaggaggttttggtgcttggtgttggtacaagac 104139
>dbj|AP005175.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBb0040H10 Length = 132919 Score = 60.0 bits (30), Expect = 7e-06 Identities = 45/50 (90%) Strand = Plus / Plus Query: 34 attgttcttgtccacggggaaggatttggtgcttggtgttggtacaagac 83 ||||||||||| || || | ||| |||||||||||||||||||||||||| Sbjct: 3960 attgttcttgttcatggaggaggttttggtgcttggtgttggtacaagac 4009
>dbj|AK071549.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023105C06, full insert sequence Length = 1134 Score = 60.0 bits (30), Expect = 7e-06 Identities = 45/50 (90%) Strand = Plus / Plus Query: 34 attgttcttgtccacggggaaggatttggtgcttggtgttggtacaagac 83 ||||||||||| || || | ||| |||||||||||||||||||||||||| Sbjct: 115 attgttcttgttcatggaggaggttttggtgcttggtgttggtacaagac 164
>ref|NM_103121.2| Arabidopsis thaliana catalytic/ hydrolase AT1G33990 mRNA, complete cds Length = 1751 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 28 aagaaaattgttcttgtccacggggaaggatttggtgcttggtgttggtacaa 80 |||||| ||||||| || ||||| ||||||||||| || |||||||||||||| Sbjct: 627 aagaaatttgttctggtgcacggtgaaggatttggggcatggtgttggtacaa 679
>gb|BT025240.1| Arabidopsis thaliana At1g33990 mRNA, complete cds Length = 1047 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 28 aagaaaattgttcttgtccacggggaaggatttggtgcttggtgttggtacaa 80 |||||| ||||||| || ||||| ||||||||||| || |||||||||||||| Sbjct: 286 aagaaatttgttctggtgcacggtgaaggatttggggcatggtgttggtacaa 338
>gb|AF424607.1|AF424607 Arabidopsis thaliana At1g33990/F12G12_220 mRNA, complete cds Length = 1512 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 28 aagaaaattgttcttgtccacggggaaggatttggtgcttggtgttggtacaa 80 |||||| ||||||| || ||||| ||||||||||| || |||||||||||||| Sbjct: 627 aagaaatttgttctggtgcacggtgaaggatttggggcatggtgttggtacaa 679
>emb|BX813911.1|CNS0ACCJ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB47ZC02 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1368 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 28 aagaaaattgttcttgtccacggggaaggatttggtgcttggtgttggtacaa 80 |||||| ||||||| || ||||| ||||||||||| || |||||||||||||| Sbjct: 532 aagaaatttgttctggtgcacggtgaaggatttggggcatggtgttggtacaa 584
>emb|BX813915.1|CNS0ABYB Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB47ZD02 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1366 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 28 aagaaaattgttcttgtccacggggaaggatttggtgcttggtgttggtacaa 80 |||||| ||||||| || ||||| ||||||||||| || |||||||||||||| Sbjct: 530 aagaaatttgttctggtgcacggtgaaggatttggggcatggtgttggtacaa 582
>gb|AC079286.2|AC079286 Arabidopsis thaliana chromosome 1 BAC T15K4 genomic sequence, complete sequence Length = 33513 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 28 aagaaaattgttcttgtccacggggaaggatttggtgcttggtgttggtacaa 80 |||||| ||||||| || ||||| ||||||||||| || |||||||||||||| Sbjct: 11241 aagaaatttgttctggtgcacggtgaaggatttggggcatggtgttggtacaa 11293
>gb|AC015446.4|AC015446 Arabidopsis thaliana chromosome I BAC F12G12 genomic sequence, complete sequence Length = 125632 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Minus Query: 28 aagaaaattgttcttgtccacggggaaggatttggtgcttggtgttggtacaa 80 |||||| ||||||| || ||||| ||||||||||| || |||||||||||||| Sbjct: 100520 aagaaatttgttctggtgcacggtgaaggatttggggcatggtgttggtacaa 100468
>gb|AY088607.1| Arabidopsis thaliana clone 8327 mRNA, complete sequence Length = 1268 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 28 aagaaaattgttcttgtccacggggaaggatttggtgcttggtgttggtacaa 80 |||||| ||||||| || ||||| ||||||||||| || |||||||||||||| Sbjct: 394 aagaaatttgttctggtgcacggtgaaggatttggggcatggtgttggtacaa 446
>dbj|AP001754.1| Homo sapiens genomic DNA, chromosome 21q, section 98/105 Length = 340000 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 90 tctcttggaggaagctggcctcg 112 ||||||||||||||||||||||| Sbjct: 219992 tctcttggaggaagctggcctcg 220014
>dbj|AP004953.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT34A24, TM0129, complete sequence Length = 110487 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Minus Query: 114 tcctgttgccttagatctcacaggttc 140 |||||||||||||||||| |||||||| Sbjct: 97164 tcctgttgccttagatcttacaggttc 97138 Score = 40.1 bits (20), Expect = 6.8 Identities = 29/32 (90%) Strand = Plus / Minus Query: 52 gaaggatttggtgcttggtgttggtacaagac 83 ||||| ||||| || ||||||||||||||||| Sbjct: 97226 gaaggttttggagcatggtgttggtacaagac 97195
>dbj|AP001066.1| Homo sapiens genomic DNA, chromosome 21, clone:D11H9, MX1-D21S171 region, complete sequence Length = 39203 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 90 tctcttggaggaagctggcctcg 112 ||||||||||||||||||||||| Sbjct: 7694 tctcttggaggaagctggcctcg 7716
>dbj|AP001065.1| Homo sapiens genomic DNA, chromosome 21, clone:KB68A7, MX1-D21S171 region, complete sequence Length = 115798 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 90 tctcttggaggaagctggcctcg 112 ||||||||||||||||||||||| Sbjct: 110005 tctcttggaggaagctggcctcg 110027
>dbj|AP002801.3| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-875G18, complete sequence Length = 218651 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Plus Query: 4 atagttttagagaacttagaaa 25 |||||||||||||||||||||| Sbjct: 92100 atagttttagagaacttagaaa 92121
>dbj|AP007282.1| Lotus japonicus genomic DNA, clone:LjT18J11, TM0184a, complete sequence Length = 81986 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 60 tggtgcttggtgttggtacaag 81 |||||||||||||||||||||| Sbjct: 64691 tggtgcttggtgttggtacaag 64670
>ref|NM_105591.2| Arabidopsis thaliana catalytic/ hydrolase AT1G69240 mRNA, complete cds Length = 1490 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 58 tttggtgcttggtgttggtacaagaccat 86 |||||||| |||||||||||||| ||||| Sbjct: 602 tttggtgcatggtgttggtacaaaaccat 630
>ref|XM_416984.1| PREDICTED: Gallus gallus similar to DAZ interacting protein 1; zinc finger DAZ interacting protein 1 (LOC418789), mRNA Length = 1925 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 22 gaaaccaagaaaattgttctt 42 ||||||||||||||||||||| Sbjct: 1711 gaaaccaagaaaattgttctt 1731
>gb|AC016821.9| Homo sapiens chromosome 10 clone RP11-404C6, complete sequence Length = 194243 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 416 agtatttactttatggaaatgggaa 440 |||||||||||||||||||| |||| Sbjct: 92553 agtatttactttatggaaattggaa 92577
>emb|BX816117.1|CNS0AD87 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH29ZC12 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1459 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 58 tttggtgcttggtgttggtacaagaccat 86 |||||||| |||||||||||||| ||||| Sbjct: 579 tttggtgcatggtgttggtacaaaaccat 607
>emb|BX816402.1|CNS0AD8Y Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH46ZB08 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1489 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 58 tttggtgcttggtgttggtacaagaccat 86 |||||||| |||||||||||||| ||||| Sbjct: 601 tttggtgcatggtgttggtacaaaaccat 629
>gb|AC018364.5|AC018364 Arabidopsis thaliana chromosome 1 BAC F23O10 genomic sequence, complete sequence Length = 93802 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 58 tttggtgcttggtgttggtacaagaccat 86 |||||||| |||||||||||||| ||||| Sbjct: 67674 tttggtgcatggtgttggtacaaaaccat 67702
>gb|AC008262.4|AC008262 Genomic sequence for Arabidopsis thaliana BAC F4N2 from chromosome I, complete sequence Length = 99698 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 58 tttggtgcttggtgttggtacaagaccat 86 |||||||| |||||||||||||| ||||| Sbjct: 81089 tttggtgcatggtgttggtacaaaaccat 81061
>gb|AC147707.5| Canis Familiaris, clone XX-10C7, complete sequence Length = 199690 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 298 ccaaaaaagatctcaaaggc 317 |||||||||||||||||||| Sbjct: 181220 ccaaaaaagatctcaaaggc 181201
>emb|CT009492.5| M.truncatula DNA sequence from clone MTH2-93A21 on chromosome 3, complete sequence Length = 122557 Score = 40.1 bits (20), Expect = 6.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 52 gaaggatttggtgcttggtgttggtacaagac 83 ||||| ||||| || ||||||||||||||||| Sbjct: 89220 gaaggctttggagcatggtgttggtacaagac 89251
>ref|XM_750310.1| Aspergillus fumigatus Af293 hypothetical protein (Afu2g10700) partial mRNA Length = 1134 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 96 ggaggaagctggcctcgatc 115 |||||||||||||||||||| Sbjct: 896 ggaggaagctggcctcgatc 877
>gb|AC146239.3| Pan troglodytes BAC clone CH251-176K11 from Y, complete sequence Length = 180132 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 57 atttggtgcttggtgttggt 76 |||||||||||||||||||| Sbjct: 11771 atttggtgcttggtgttggt 11790
>gb|AC146452.3| Pan troglodytes BAC clone CH251-483N3 from Y, complete sequence Length = 215209 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 57 atttggtgcttggtgttggt 76 |||||||||||||||||||| Sbjct: 166702 atttggtgcttggtgttggt 166721
>gb|AC116596.3| Mus musculus BAC clone RP24-335P21 from chromosome 15, complete sequence Length = 165103 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 420 tttactttatggaaatggga 439 |||||||||||||||||||| Sbjct: 75178 tttactttatggaaatggga 75159
>gb|AC145767.28| Medicago truncatula clone mth2-11f1, complete sequence Length = 134401 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 20 tagaaaccaagaaaattgtt 39 |||||||||||||||||||| Sbjct: 10016 tagaaaccaagaaaattgtt 9997
>emb|Z92547.1|HS863K19 Human DNA sequence from clone RP5-863K19 on chromosome Xp22.11-22.2 Contains the 5'end of a novel gene, complete sequence Length = 134845 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 286 ttagaacactgcccaaaaaagatc 309 |||||||||||||||||| ||||| Sbjct: 33294 ttagaacactgcccaaaacagatc 33317
>emb|AL365434.13| Human DNA sequence from clone RP11-236B18 on chromosome 10 Contains three novel genes and a DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 18 (Myc-regulated) (DDX18) pseudogene, complete sequence Length = 158357 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 260 gtggaggtgcaagtgtgtca 279 |||||||||||||||||||| Sbjct: 144979 gtggaggtgcaagtgtgtca 144998
>emb|AJ888190.1| Isotoma viridis mitochondrial partial coii gene for cytochrome oxidase subunit II, isolate 0112_CO2_02072915 Length = 710 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 286 ttagaacactgcccaaaaaa 305 |||||||||||||||||||| Sbjct: 600 ttagaacactgcccaaaaaa 581
>gb|AC158922.8| Mus musculus chromosome 15, clone RP23-182C12, complete sequence Length = 201723 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 287 tagaacactgcccaaaaaag 306 |||||||||||||||||||| Sbjct: 135570 tagaacactgcccaaaaaag 135589
>dbj|BS000593.2| Pan troglodytes chromosome Y clone:PTB-006C19, complete sequences Length = 108944 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 57 atttggtgcttggtgttggt 76 |||||||||||||||||||| Sbjct: 81121 atttggtgcttggtgttggt 81102
>gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence Length = 23952694 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 57 atttggtgcttggtgttggt 76 |||||||||||||||||||| Sbjct: 16316689 atttggtgcttggtgttggt 16316708
>gb|AC114560.8| Mus musculus chromosome 15, clone RP23-54K6, complete sequence Length = 151670 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 287 tagaacactgcccaaaaaag 306 |||||||||||||||||||| Sbjct: 39570 tagaacactgcccaaaaaag 39589
>emb|CT025579.12| Mouse DNA sequence from clone RP24-189A10 on chromosome 14, complete sequence Length = 173961 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 410 aatcacagtatttactttat 429 |||||||||||||||||||| Sbjct: 119777 aatcacagtatttactttat 119758
>emb|AJ249420.1|MMU249420 Mus musculus partial PI3Kgamma gene for phosphoinositide 3-kinase gamma, exon 11 Length = 2241 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 152 acactgatacaaacagcata 171 |||||||||||||||||||| Sbjct: 2095 acactgatacaaacagcata 2076
>gb|AC138528.8| Mus musculus chromosome 3, clone RP23-329L9, complete sequence Length = 188290 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 419 atttactttatggaaatggg 438 |||||||||||||||||||| Sbjct: 62214 atttactttatggaaatggg 62233
>gb|AC156797.2| Mus musculus BAC clone RP24-88A16 from chromosome 14, complete sequence Length = 166341 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 410 aatcacagtatttactttat 429 |||||||||||||||||||| Sbjct: 79588 aatcacagtatttactttat 79569
>emb|AL928628.9| Zebrafish DNA sequence from clone DKEY-5G18 in linkage group 7, complete sequence Length = 229942 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 482 tcaaggggttatatttcaaccaaa 505 |||| ||||||||||||||||||| Sbjct: 27177 tcaacgggttatatttcaaccaaa 27154 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,849,935 Number of Sequences: 3902068 Number of extensions: 4849935 Number of successful extensions: 88251 Number of sequences better than 10.0: 51 Number of HSP's better than 10.0 without gapping: 51 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 88038 Number of HSP's gapped (non-prelim): 213 length of query: 505 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 483 effective length of database: 17,147,199,772 effective search space: 8282097489876 effective search space used: 8282097489876 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)