ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal9p10 |
|---|---|
| Clone Library Name | barley_pub |
>COAA1_CHICK (P08125) Collagen alpha-1(X) chain precursor| Length = 674 Score = 31.2 bits (69), Expect = 0.62 Identities = 17/37 (45%), Positives = 20/37 (54%), Gaps = 2/37 (5%) Frame = +1 Query: 166 GVRGALGP--WPHMPGAAAEWDSTGLPTGAGFGRSGM 270 GVRG +GP P PGA E + GLP AG G+ Sbjct: 442 GVRGPIGPPGMPGAPGAKGEAGAPGLPGPAGIVTKGL 478
>TNFL6_MACNE (P63306) Tumor necrosis factor ligand superfamily member 6 (Fas| antigen ligand) (Fas ligand) (CD178 antigen) (CD95L protein) [Contains: Tumor necrosis factor ligand superfamily member 6, membrane form; Tumor necrosis factor ligand superfamily Length = 280 Score = 30.4 bits (67), Expect = 1.1 Identities = 14/32 (43%), Positives = 18/32 (56%) Frame = +2 Query: 2 PPPPKTPHRELSPRPXPPRAAHGDHHSRLLLI 97 PPPP +P L P P PP G+H + L L+ Sbjct: 55 PPPPPSP---LPPLPLPPLKKRGNHSTGLCLL 83
>TNFL6_MACMU (P63307) Tumor necrosis factor ligand superfamily member 6 (Fas| antigen ligand) (Fas ligand) (CD178 antigen) (CD95L protein) [Contains: Tumor necrosis factor ligand superfamily member 6, membrane form; Tumor necrosis factor ligand superfamily Length = 280 Score = 30.4 bits (67), Expect = 1.1 Identities = 14/32 (43%), Positives = 18/32 (56%) Frame = +2 Query: 2 PPPPKTPHRELSPRPXPPRAAHGDHHSRLLLI 97 PPPP +P L P P PP G+H + L L+ Sbjct: 55 PPPPPSP---LPPLPLPPLKKRGNHSTGLCLL 83
>TNFL6_MACFA (P63308) Tumor necrosis factor ligand superfamily member 6 (Fas| antigen ligand) (Fas ligand) (CD178 antigen) (CD95L protein) [Contains: Tumor necrosis factor ligand superfamily member 6, membrane form; Tumor necrosis factor ligand superfamily Length = 280 Score = 30.4 bits (67), Expect = 1.1 Identities = 14/32 (43%), Positives = 18/32 (56%) Frame = +2 Query: 2 PPPPKTPHRELSPRPXPPRAAHGDHHSRLLLI 97 PPPP +P L P P PP G+H + L L+ Sbjct: 55 PPPPPSP---LPPLPLPPLKKRGNHSTGLCLL 83
>COL14_CAEEL (P18834) Cuticle collagen 14| Length = 345 Score = 30.4 bits (67), Expect = 1.1 Identities = 21/63 (33%), Positives = 26/63 (41%) Frame = -2 Query: 353 PLHNHGRGPALLPRGLHREVGRPRHQQVIPDRPNPAPVGSPVESHSAAAPGICGHGPSAP 174 P +G+G P GL G+P P VG P ++ APG C H P A Sbjct: 290 PPGENGKGGGQGPSGLPGPPGQPGQNGA------PGEVGQPGDN---GAPGSCDHCPPAR 340 Query: 173 LTP 165 L P Sbjct: 341 LAP 343
>APA_MYCAV (Q48919) Alanine and proline-rich secreted protein apa precursor| (45/47 kDa antigen) (Fibronectin attachment protein) (FAP-A) Length = 381 Score = 30.4 bits (67), Expect = 1.1 Identities = 23/65 (35%), Positives = 28/65 (43%), Gaps = 1/65 (1%) Frame = -2 Query: 356 EPLHNHGRG-PALLPRGLHREVGRPRHQQVIPDRPNPAPVGSPVESHSAAAPGICGHGPS 180 +P N G PA P G R PR +++IP R P P G+P AAP P Sbjct: 65 QPADNAQAGAPAPAPNGQQRP---PRRRRMIPTRA-PPPAGAPPNGAPPAAPNGAPPPPV 120 Query: 179 APLTP 165 P P Sbjct: 121 DPNAP 125
>BRO1_USTMA (Q4PHA8) Vacuolar protein-sorting protein BRO1 (BRO| domain-containing protein 1) Length = 1076 Score = 30.0 bits (66), Expect = 1.4 Identities = 12/26 (46%), Positives = 15/26 (57%) Frame = +2 Query: 2 PPPPKTPHRELSPRPXPPRAAHGDHH 79 PPPP PH++ S + PP AA H Sbjct: 859 PPPPPLPHQQASYQQQPPPAAAAPAH 884
>ARI1B_HUMAN (Q8NFD5) AT-rich interactive domain-containing protein 1B (ARID| domain-containing protein 1B) (Osa homolog 2) (hOsa2) (p250R) (BRG1-binding protein hELD/OSA1) (BRG1-associated factor 250b) (BAF250B) Length = 2236 Score = 30.0 bits (66), Expect = 1.4 Identities = 15/36 (41%), Positives = 21/36 (58%) Frame = -2 Query: 281 HQQVIPDRPNPAPVGSPVESHSAAAPGICGHGPSAP 174 H IP P+P+PVGSPV S+ + + GP +P Sbjct: 714 HLSSIPGGPSPSPVGSPVGSNQSRS------GPISP 743
>ADRB3_CANFA (O02662) Beta-3 adrenergic receptor (Beta-3 adrenoceptor) (Beta-3| adrenoreceptor) Length = 405 Score = 30.0 bits (66), Expect = 1.4 Identities = 11/30 (36%), Positives = 15/30 (50%) Frame = +1 Query: 181 LGPWPHMPGAAAEWDSTGLPTGAGFGRSGM 270 + PWPH G+ A W + PT SG+ Sbjct: 1 MAPWPHGNGSVASWPAAPTPTPDAANTSGL 30
>TNFL6_FELCA (Q861W5) Tumor necrosis factor ligand superfamily member 6 (Fas| antigen ligand) (Fas ligand) (CD178 antigen) [Contains: Tumor necrosis factor ligand superfamily member 6, membrane form; Tumor necrosis factor ligand superfamily member 6, solub Length = 280 Score = 29.6 bits (65), Expect = 1.8 Identities = 14/32 (43%), Positives = 17/32 (53%) Frame = +2 Query: 2 PPPPKTPHRELSPRPXPPRAAHGDHHSRLLLI 97 PPPP P L P P PP DH++ L L+ Sbjct: 55 PPPPPPP---LPPLPLPPLKTRRDHNTGLCLL 83
>TNFL6_CERTO (Q9BDN1) Tumor necrosis factor ligand superfamily member 6 (Fas| antigen ligand) (Fas ligand) (CD178 antigen) (Protein CD95L) [Contains: Tumor necrosis factor ligand superfamily member 6, membrane form; Tumor necrosis factor ligand superfamily Length = 280 Score = 29.6 bits (65), Expect = 1.8 Identities = 14/32 (43%), Positives = 17/32 (53%) Frame = +2 Query: 2 PPPPKTPHRELSPRPXPPRAAHGDHHSRLLLI 97 PPPP P L P P PP G+H + L L+ Sbjct: 55 PPPPPPP---LPPLPLPPLKKRGNHSTGLCLL 83
>TNFL6_HUMAN (P48023) Tumor necrosis factor ligand superfamily member 6 (Fas| antigen ligand) (Fas ligand) (CD178 antigen) (CD95L protein) (Apoptosis antigen ligand) (APTL) [Contains: Tumor necrosis factor ligand superfamily member 6, membrane form; Tumor Length = 281 Score = 29.6 bits (65), Expect = 1.8 Identities = 14/32 (43%), Positives = 17/32 (53%) Frame = +2 Query: 2 PPPPKTPHRELSPRPXPPRAAHGDHHSRLLLI 97 PPPP P L P P PP G+H + L L+ Sbjct: 56 PPPPPPP---LPPLPLPPLKKRGNHSTGLCLL 84
>RAD52_CANGA (Q6FSW2) DNA repair and recombination protein RAD52| Length = 505 Score = 29.6 bits (65), Expect = 1.8 Identities = 12/22 (54%), Positives = 15/22 (68%) Frame = -2 Query: 308 LHREVGRPRHQQVIPDRPNPAP 243 L REVGRP+ V P +P+P P Sbjct: 484 LRREVGRPKINNVGPKKPSPTP 505
>EAD_EBV (P03191) Early antigen protein D (EA-D)| Length = 404 Score = 29.6 bits (65), Expect = 1.8 Identities = 14/31 (45%), Positives = 15/31 (48%) Frame = +2 Query: 2 PPPPKTPHRELSPRPXPPRAAHGDHHSRLLL 94 PPPP+TP E RP P A H S L Sbjct: 339 PPPPRTPTWESPARPETPSPAIPSHSSNTAL 369
>TNFL6_PIG (Q9BEA8) Tumor necrosis factor ligand superfamily member 6 (Fas| antigen ligand) (Fas ligand) (CD178 antigen) (CD95L protein) [Contains: Tumor necrosis factor ligand superfamily member 6, membrane form; Tumor necrosis factor ligand superfamily m Length = 282 Score = 29.3 bits (64), Expect = 2.4 Identities = 15/34 (44%), Positives = 18/34 (52%), Gaps = 2/34 (5%) Frame = +2 Query: 2 PPPPKT--PHRELSPRPXPPRAAHGDHHSRLLLI 97 PPPP T P R L P P P DH++ L L+ Sbjct: 52 PPPPPTLLPSRPLPPLPPPSLKKKRDHNAGLCLL 85
>SOX30_MOUSE (Q8CGW4) Transcription factor SOX-30| Length = 782 Score = 29.3 bits (64), Expect = 2.4 Identities = 11/19 (57%), Positives = 11/19 (57%) Frame = +2 Query: 2 PPPPKTPHRELSPRPXPPR 58 PPPP P PRP PPR Sbjct: 8 PPPPPPPPPRQPPRPTPPR 26 Score = 27.3 bits (59), Expect = 9.0 Identities = 10/18 (55%), Positives = 11/18 (61%) Frame = +2 Query: 2 PPPPKTPHRELSPRPXPP 55 PPPP+ P R PRP P Sbjct: 13 PPPPRQPPRPTPPRPLRP 30
>CO1A1_CANFA (Q9XSJ7) Collagen alpha-1(I) chain precursor| Length = 1460 Score = 29.3 bits (64), Expect = 2.4 Identities = 19/58 (32%), Positives = 22/58 (37%), Gaps = 7/58 (12%) Frame = -2 Query: 317 PRGLHREVGRPRHQQVIPDRPNPAPVGSPVESHSAAAPGICG-------HGPSAPLTP 165 P+G+ E G P NP G P + APGI G GPS P P Sbjct: 362 PQGVRGEPGPPGPAGAAGPAGNPGADGQPGAKGANGAPGIAGAPGFPGARGPSGPQGP 419
>CO1A1_RAT (P02454) Collagen alpha-1(I) chain precursor| Length = 1453 Score = 29.3 bits (64), Expect = 2.4 Identities = 19/58 (32%), Positives = 22/58 (37%), Gaps = 7/58 (12%) Frame = -2 Query: 317 PRGLHREVGRPRHQQVIPDRPNPAPVGSPVESHSAAAPGICG-------HGPSAPLTP 165 P+G+ E G P NP G P + APGI G GPS P P Sbjct: 355 PQGVRGEPGPPGPAGAAGPAGNPGADGQPGAKGANGAPGIAGAPGFPGARGPSGPQGP 412
>CO1A1_MOUSE (P11087) Collagen alpha-1(I) chain precursor| Length = 1453 Score = 29.3 bits (64), Expect = 2.4 Identities = 19/58 (32%), Positives = 22/58 (37%), Gaps = 7/58 (12%) Frame = -2 Query: 317 PRGLHREVGRPRHQQVIPDRPNPAPVGSPVESHSAAAPGICG-------HGPSAPLTP 165 P+G+ E G P NP G P + APGI G GPS P P Sbjct: 355 PQGVRGEPGPPGPAGAAGPAGNPGADGQPGAKGANGAPGIAGAPGFPGARGPSGPQGP 412
>YPRO_OWEFU (P21260) Hypothetical proline-rich protein (Fragment)| Length = 141 Score = 29.3 bits (64), Expect = 2.4 Identities = 14/31 (45%), Positives = 15/31 (48%) Frame = +2 Query: 2 PPPPKTPHRELSPRPXPPRAAHGDHHSRLLL 94 PPPP P P P PPR A H+ L L Sbjct: 41 PPPPPPPPPPPPPPPPPPRRARIHHNIPLFL 71
>CO1A1_HUMAN (P02452) Collagen alpha-1(I) chain precursor| Length = 1464 Score = 29.3 bits (64), Expect = 2.4 Identities = 19/58 (32%), Positives = 22/58 (37%), Gaps = 7/58 (12%) Frame = -2 Query: 317 PRGLHREVGRPRHQQVIPDRPNPAPVGSPVESHSAAAPGICG-------HGPSAPLTP 165 P+G+ E G P NP G P + APGI G GPS P P Sbjct: 366 PQGVRGEPGPPGPAGAAGPAGNPGADGQPGAKGANGAPGIAGAPGFPGARGPSGPQGP 423
>EMIL2_HUMAN (Q9BXX0) EMILIN-2 precursor (Elastin microfibril interface-located| protein 2) (Elastin microfibril interfacer 2) (Protein FOAP-10) Length = 1053 Score = 28.9 bits (63), Expect = 3.1 Identities = 10/19 (52%), Positives = 11/19 (57%) Frame = +2 Query: 2 PPPPKTPHRELSPRPXPPR 58 PPP + P L P P PPR Sbjct: 792 PPPAEAPKEPLQPEPAPPR 810
>COBA2_HUMAN (P13942) Collagen alpha-2(XI) chain precursor| Length = 1736 Score = 28.9 bits (63), Expect = 3.1 Identities = 18/47 (38%), Positives = 20/47 (42%), Gaps = 1/47 (2%) Frame = -2 Query: 311 GLHREVGRPRHQQVIPDRPNPAPVGSPVESHSAAAPGICGH-GPSAP 174 GL +G P Q DR P P GSP + PG G GP P Sbjct: 1414 GLIGLIGPPGEQGEKGDRGLPGPQGSPGQKGEMGIPGASGPIGPGGP 1460
>PDE4D_RAT (P14270) cAMP-specific 3',5'-cyclic phosphodiesterase 4D (EC| 3.1.4.17) (DPDE3) Length = 803 Score = 28.9 bits (63), Expect = 3.1 Identities = 10/18 (55%), Positives = 12/18 (66%) Frame = +2 Query: 2 PPPPKTPHRELSPRPXPP 55 PPPP +P +L P P PP Sbjct: 59 PPPPPSPQPQLQPPPPPP 76
>CO1A1_CHICK (P02457) Collagen alpha-1(I) chain precursor| Length = 1453 Score = 28.9 bits (63), Expect = 3.1 Identities = 19/58 (32%), Positives = 21/58 (36%), Gaps = 7/58 (12%) Frame = -2 Query: 317 PRGLHREVGRPRHQQVIPDRPNPAPVGSPVESHSAAAPGICG-------HGPSAPLTP 165 P+G E G P NP G P + APGI G GPS P P Sbjct: 355 PQGSRGEPGPPGPAGAAGPAGNPGADGQPGAKGATGAPGIAGAPGFPGARGPSGPQGP 412
>OXAA_STRCO (O54569) Membrane protein oxaA| Length = 431 Score = 28.5 bits (62), Expect = 4.0 Identities = 9/13 (69%), Positives = 10/13 (76%) Frame = -1 Query: 156 GGIWGPDWGWVWG 118 G I+GPD GW WG Sbjct: 27 GAIFGPDTGWAWG 39
>SPEG_MOUSE (Q62407) Striated muscle-specific serine/threonine protein kinase (EC| 2.7.11.1) (Aortic preferentially expressed protein 1) (APEG-1) Length = 3262 Score = 28.5 bits (62), Expect = 4.0 Identities = 15/46 (32%), Positives = 23/46 (50%) Frame = -2 Query: 302 REVGRPRHQQVIPDRPNPAPVGSPVESHSAAAPGICGHGPSAPLTP 165 R+ +P Q +P++ P P PV + A P + P+ PLTP Sbjct: 2205 RDSPQPPEPQPVPEKV-PEPKPEPVRAAKPAQPPLALQMPTQPLTP 2249
>SYN2_HUMAN (Q92777) Synapsin-2 (Synapsin II)| Length = 582 Score = 28.5 bits (62), Expect = 4.0 Identities = 18/54 (33%), Positives = 23/54 (42%) Frame = -2 Query: 326 ALLPRGLHREVGRPRHQQVIPDRPNPAPVGSPVESHSAAAPGICGHGPSAPLTP 165 A LP G ++ RP QQ P P P P + ++AAP GP P Sbjct: 16 ANLPNGYMTDLQRPEPQQ-----PPPPPPPGPGAASASAAPPTASPGPERKPPP 64
>LEG3_RABIT (P47845) Galectin-3 (Galactose-specific lectin 3) (Mac-2 antigen)| (IgE-binding protein) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Laminin-binding protein) (Lectin L-29) Length = 241 Score = 28.5 bits (62), Expect = 4.0 Identities = 12/26 (46%), Positives = 15/26 (57%) Frame = +1 Query: 175 GALGPWPHMPGAAAEWDSTGLPTGAG 252 GA G +P PG + S G P+GAG Sbjct: 65 GAHGAYPGQPGGPGAYPSPGQPSGAG 90
>FMN1A_MOUSE (Q05860) Formin-1 isoforms I/II/III (Limb deformity protein)| Length = 1468 Score = 28.5 bits (62), Expect = 4.0 Identities = 18/58 (31%), Positives = 22/58 (37%), Gaps = 2/58 (3%) Frame = +2 Query: 8 PPKTPHRELSPRPXP--PRAAHGDHHSRLLLIXXXXXXXXXXXXXXXXXIPPAPQESE 175 P + H+ LSP P P PR H R+LL +PP P E E Sbjct: 511 PQSSAHKRLSPVPSPLSPRCPSPQQHHRILL------------------LPPLPSEGE 550
>BCL9_HUMAN (O00512) B-cell lymphoma 9 protein (Bcl-9) (Legless homolog)| Length = 1426 Score = 28.5 bits (62), Expect = 4.0 Identities = 14/38 (36%), Positives = 18/38 (47%) Frame = -2 Query: 287 PRHQQVIPDRPNPAPVGSPVESHSAAAPGICGHGPSAP 174 PR +P P PVG+P + AP + GH P P Sbjct: 1282 PRMGLALPGMGGPGPVGTP-DIPLGTAPSMPGHNPMRP 1318
>DCOA_KLEPN (P13187) Oxaloacetate decarboxylase alpha chain (EC 4.1.1.3)| Length = 595 Score = 28.1 bits (61), Expect = 5.3 Identities = 14/35 (40%), Positives = 19/35 (54%) Frame = -2 Query: 275 QVIPDRPNPAPVGSPVESHSAAAPGICGHGPSAPL 171 Q+ P PAP +P + +AAAP G +APL Sbjct: 499 QLTAAAPAPAPAPAPASAPAAAAPAGAGTPVTAPL 533
>CECR6_MOUSE (Q99MX7) Cat eye syndrome critical region protein 6 homolog| Length = 572 Score = 28.1 bits (61), Expect = 5.3 Identities = 17/46 (36%), Positives = 20/46 (43%) Frame = +1 Query: 202 PGAAAEWDSTGLPTGAGFGRSGMTC*CLGRPTSLWRPRGRSAGPRP 339 PG+ + + G TG C C GRPT R RGR G P Sbjct: 144 PGSRSAVGAGGTGTGGAASCCSCCCCCCGRPTRSGR-RGRRRGCSP 188
>ARHGF_HUMAN (O94989) Rho guanine nucleotide exchange factor 15 (Vsm-RhoGEF)| Length = 841 Score = 28.1 bits (61), Expect = 5.3 Identities = 20/55 (36%), Positives = 23/55 (41%) Frame = -2 Query: 329 PALLPRGLHREVGRPRHQQVIPDRPNPAPVGSPVESHSAAAPGICGHGPSAPLTP 165 PALLP R Q PD P+ P SPV S +A+P P P P Sbjct: 73 PALLPPSASRA---SLDSQTSPDSPSSTPTPSPV-SRRSASPEPAPRSPVPPPKP 123
>TBX10_HUMAN (O75333) T-box transcription factor TBX10 (T-box protein 10)| Length = 385 Score = 28.1 bits (61), Expect = 5.3 Identities = 15/34 (44%), Positives = 18/34 (52%) Frame = +1 Query: 187 PWPHMPGAAAEWDSTGLPTGAGFGRSGMTC*CLG 288 P+P +P A+ D GLP AG G T CLG Sbjct: 347 PYP-LPNIRADRDQGGLPLPAGLGLLSPTVVCLG 379
>SIAH2_RAT (Q8R4T2) Ubiquitin ligase SIAH2 (EC 6.3.2.-) (Seven in absentia| homolog 2) (Siah-2) Length = 325 Score = 28.1 bits (61), Expect = 5.3 Identities = 12/21 (57%), Positives = 14/21 (66%) Frame = +2 Query: 2 PPPPKTPHRELSPRPXPPRAA 64 PPPP+TPH +P P P AA Sbjct: 19 PPPPQTPH---APSPAAPPAA 36
>SIAH2_MOUSE (Q06986) Ubiquitin ligase SIAH2 (EC 6.3.2.-) (Seven in absentia| homolog 2) (Siah-2) (mSiah2) Length = 325 Score = 28.1 bits (61), Expect = 5.3 Identities = 12/21 (57%), Positives = 14/21 (66%) Frame = +2 Query: 2 PPPPKTPHRELSPRPXPPRAA 64 PPPP+TPH +P P P AA Sbjct: 19 PPPPQTPH---APSPAAPPAA 36
>SRRM1_MOUSE (Q52KI8) Serine/arginine repetitive matrix protein 1| (Plenty-of-prolines 101) Length = 946 Score = 28.1 bits (61), Expect = 5.3 Identities = 11/19 (57%), Positives = 11/19 (57%) Frame = +2 Query: 2 PPPPKTPHRELSPRPXPPR 58 PPPP P R SP P P R Sbjct: 580 PPPPPPPRRRRSPTPPPRR 598
>GAP2_DROME (Q8T498) Probable Ras GTPase-activating protein| Length = 1556 Score = 28.1 bits (61), Expect = 5.3 Identities = 24/70 (34%), Positives = 30/70 (42%), Gaps = 15/70 (21%) Frame = -2 Query: 365 DALEPL--HNHGRG---------PALLPRGLHREVGRPRH----QQVIPDRPNPAPVGSP 231 D EP HNH +G PA +P G + + H Q I P+P+ SP Sbjct: 1083 DVAEPANHHNHNQGQQNHQGHLKPAAVP-GKEQLSAKSSHCSSGYQSISTNPSPSQSSSP 1141 Query: 230 VESHSAAAPG 201 VES AA G Sbjct: 1142 VESQLKAAMG 1151
>SSR1_RAT (P28646) Somatostatin receptor type 1 (SS1R) (SRIF-2)| Length = 391 Score = 28.1 bits (61), Expect = 5.3 Identities = 10/32 (31%), Positives = 15/32 (46%) Frame = -2 Query: 272 VIPDRPNPAPVGSPVESHSAAAPGICGHGPSA 177 + P+ P+P SP S G+C GP + Sbjct: 1 MFPNGTAPSPTSSPSSSPGGCGEGVCSRGPGS 32
>UNG_VIBVY (Q7MNR0) Uracil-DNA glycosylase (EC 3.2.2.-) (UDG)| Length = 226 Score = 28.1 bits (61), Expect = 5.3 Identities = 15/48 (31%), Positives = 27/48 (56%), Gaps = 3/48 (6%) Frame = -2 Query: 368 DDALEPLHNHGRGPALLPRGLH-REVGR--PRHQQVIPDRPNPAPVGS 234 D +E ++ H +G L G H ++ GR RH+ V+ P+P+P+ + Sbjct: 146 DKVIEAINQHQQGVVFLLWGSHAQKKGRFIDRHKHVVLTAPHPSPLSA 193
>UNG_VIBVU (Q8DEP7) Uracil-DNA glycosylase (EC 3.2.2.-) (UDG)| Length = 226 Score = 28.1 bits (61), Expect = 5.3 Identities = 15/48 (31%), Positives = 27/48 (56%), Gaps = 3/48 (6%) Frame = -2 Query: 368 DDALEPLHNHGRGPALLPRGLH-REVGR--PRHQQVIPDRPNPAPVGS 234 D +E ++ H +G L G H ++ GR RH+ V+ P+P+P+ + Sbjct: 146 DKVIEAINQHQQGVVFLLWGSHAQKKGRFIDRHKHVVLTAPHPSPLSA 193
>PI5PA_RAT (Q9JMC1) Phosphatidylinositol 4,5-bisphosphate 5-phosphatase A (EC| 3.1.3.56) (Proline-rich inositol polyphosphate 5-phosphatase) Length = 1001 Score = 23.9 bits (50), Expect(2) = 6.4 Identities = 20/66 (30%), Positives = 25/66 (37%) Frame = -2 Query: 362 ALEPLHNHGRGPALLPRGLHREVGRPRHQQVIPDRPNPAPVGSPVESHSAAAPGICGHGP 183 AL P RG + P R++ R V PDR HS+ + G GP Sbjct: 893 ALRPSSRERRGGSRSPSPQSRQLPR-----VAPDR-----------GHSSGSRGSSEEGP 936 Query: 182 SAPLTP 165 S P P Sbjct: 937 SGPPGP 942 Score = 22.3 bits (46), Expect(2) = 6.4 Identities = 7/9 (77%), Positives = 7/9 (77%) Frame = -1 Query: 162 GAGGIWGPD 136 G GG WGPD Sbjct: 967 GGGGSWGPD 975
>ADRB3_RAT (P26255) Beta-3 adrenergic receptor (Beta-3 adrenoceptor) (Beta-3| adrenoreceptor) Length = 400 Score = 27.7 bits (60), Expect = 6.9 Identities = 19/48 (39%), Positives = 24/48 (50%), Gaps = 3/48 (6%) Frame = -2 Query: 314 RGLHREVGR--PRHQQVIPDR-PNPAPVGSPVESHSAAAPGICGHGPS 180 R L RE+GR P P R P+PA VG+P S + CG P+ Sbjct: 233 RLLRRELGRFPPEESPRSPSRSPSPATVGTPTASDGVPS---CGRRPA 277
>TYPH_MYCTU (O53366) Thymidine phosphorylase (EC 2.4.2.4) (TdRPase)| Length = 427 Score = 27.7 bits (60), Expect = 6.9 Identities = 21/65 (32%), Positives = 30/65 (46%), Gaps = 4/65 (6%) Frame = -2 Query: 374 LADDALEPLHNHGRGPALLPRGLHREVGRPRHQQVIP----DRPNPAPVGSPVESHSAAA 207 LA + LE HGR PA + L R ++++ D P P+GS E+ +A A Sbjct: 279 LAGEMLELAGIHGRDPA---QTLRDGTAMDRFRRLVAAQGGDLSKPLPIGSHSETVTAGA 335 Query: 206 PGICG 192 G G Sbjct: 336 SGTMG 340
>ZN592_HUMAN (Q92610) Zinc finger protein 592| Length = 1267 Score = 27.7 bits (60), Expect = 6.9 Identities = 12/21 (57%), Positives = 15/21 (71%) Frame = -2 Query: 266 PDRPNPAPVGSPVESHSAAAP 204 PD P+ +PVGSP+ S A AP Sbjct: 398 PDDPSKSPVGSPLGSAIAEAP 418
>RFNG_CHICK (O12972) Beta-1,3-N-acetylglucosaminyltransferase radical fringe| (EC 2.4.1.222) (O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase) Length = 372 Score = 27.7 bits (60), Expect = 6.9 Identities = 19/57 (33%), Positives = 21/57 (36%), Gaps = 4/57 (7%) Frame = -2 Query: 323 LLPRGLHREVGRPRHQQVIPDRPNP----APVGSPVESHSAAAPGICGHGPSAPLTP 165 LLPRG R R P RP+P P GS V G G G +P Sbjct: 26 LLPRGQPPAAPRRRPPPAGPSRPSPKREARPAGSDVPGDRGGGSGAAGGGRGVAGSP 82
>PRRT1_HUMAN (Q99946) Proline-rich transmembrane protein 1| Length = 306 Score = 27.7 bits (60), Expect = 6.9 Identities = 11/26 (42%), Positives = 12/26 (46%) Frame = +2 Query: 2 PPPPKTPHRELSPRPXPPRAAHGDHH 79 PPP P P PP+AA HH Sbjct: 17 PPPYNAPQPPAEPPAPPPQAAPSSHH 42
>HNF4A_HUMAN (P41235) Hepatocyte nuclear factor 4-alpha (HNF-4-alpha)| (Transcription factor HNF-4) (Transcription factor 14) Length = 465 Score = 27.7 bits (60), Expect = 6.9 Identities = 15/43 (34%), Positives = 17/43 (39%) Frame = -2 Query: 329 PALLPRGLHREVGRPRHQQVIPDRPNPAPVGSPVESHSAAAPG 201 P L G E RPR Q P+ P P+P G PG Sbjct: 400 PTHLSNGQMCEWPRPRGQAATPETPQPSPPGGSGSEPYKLLPG 442
>CO1A2_BOVIN (P02465) Collagen alpha-2(I) chain precursor| Length = 1364 Score = 27.7 bits (60), Expect = 6.9 Identities = 21/62 (33%), Positives = 25/62 (40%) Frame = -2 Query: 359 LEPLHNHGRGPALLPRGLHREVGRPRHQQVIPDRPNPAPVGSPVESHSAAAPGICGHGPS 180 L P+ N G PRG EVG P + NP G P +A PG+ G P Sbjct: 265 LGPVGNPGPAGPAGPRG---EVGLPGLSGPVGPPGNPGANGLPGAKGAAGLPGVAG-APG 320 Query: 179 AP 174 P Sbjct: 321 LP 322
>CAC1A_RABIT (P27884) Voltage-dependent P/Q-type calcium channel alpha-1A subunit| (Voltage-gated calcium channel alpha subunit Cav2.1) (Calcium channel, L type, alpha-1 polypeptide isoform 4) (Brain calcium channel I) (BI) Length = 2424 Score = 27.7 bits (60), Expect = 6.9 Identities = 16/31 (51%), Positives = 17/31 (54%), Gaps = 3/31 (9%) Frame = +2 Query: 2 PPPPKTPHRELSPRPXP---PRAAHGDHHSR 85 PPPP P EL+PR P PR GD SR Sbjct: 2372 PPPP--PPGELAPRAHPARTPRPGPGDSRSR 2400
>AB1IP_CHICK (Q5ZL23) Amyloid beta A4 precursor protein-binding family B member| 1-interacting protein (APBB1-interacting protein 1) Length = 485 Score = 27.7 bits (60), Expect = 6.9 Identities = 10/18 (55%), Positives = 11/18 (61%) Frame = +2 Query: 2 PPPPKTPHRELSPRPXPP 55 PPPP P +L P P PP Sbjct: 126 PPPPPAPDLDLPPPPPPP 143
>GAG_AVISY (P03327) Gag polyprotein [Contains: Core protein p19; Core protein| p10] Length = 284 Score = 27.7 bits (60), Expect = 6.9 Identities = 22/63 (34%), Positives = 26/63 (41%), Gaps = 12/63 (19%) Frame = -2 Query: 317 PRGLHREVGRPRHQQVI--PDR----PNPAPVGS------PVESHSAAAPGICGHGPSAP 174 PRG + PRH + P R P PAP+ S P AA PG G P Sbjct: 200 PRGAEQPRAEPRHTGLTLGPARSARLPPPAPLPSSLPLLPPFPPRVAAVPGGAGGAPLPS 259 Query: 173 LTP 165 L+P Sbjct: 260 LSP 262
>ZN207_HUMAN (O43670) Zinc finger protein 207| Length = 478 Score = 27.7 bits (60), Expect = 6.9 Identities = 10/26 (38%), Positives = 13/26 (50%) Frame = +2 Query: 2 PPPPKTPHRELSPRPXPPRAAHGDHH 79 PP P P ++ P PP +G HH Sbjct: 407 PPQPGIPQQQGMRPPMPPHGQYGGHH 432
>WASIP_HUMAN (O43516) Wiskott-Aldrich syndrome protein-interacting protein| (WASP-interacting protein) (PRPL-2 protein) Length = 503 Score = 27.7 bits (60), Expect = 6.9 Identities = 13/29 (44%), Positives = 15/29 (51%) Frame = +2 Query: 2 PPPPKTPHRELSPRPXPPRAAHGDHHSRL 88 PPPP P R P P PP ++ D RL Sbjct: 307 PPPPPPPSRP-GPPPLPPSSSGNDETPRL 334
>TRRAP_HUMAN (Q9Y4A5) Transformation/transcription domain-associated protein| (350/400 kDa PCAF-associated factor) (PAF350/400) (STAF40) (Tra1 homolog) Length = 3859 Score = 27.7 bits (60), Expect = 6.9 Identities = 10/24 (41%), Positives = 13/24 (54%) Frame = +2 Query: 2 PPPPKTPHRELSPRPXPPRAAHGD 73 PPPP P ++P P PP G+ Sbjct: 509 PPPPPPPATPVTPAPVPPFEKQGE 532
>CO2A1_HUMAN (P02458) Collagen alpha-1(II) chain precursor [Contains:| Chondrocalcin] Length = 1418 Score = 27.7 bits (60), Expect = 6.9 Identities = 25/63 (39%), Positives = 25/63 (39%), Gaps = 6/63 (9%) Frame = -2 Query: 335 RGP--ALLPRGLHREVGRPRHQQVIPDRPNPAPVGSPVESHSAAAPGICG----HGPSAP 174 RGP A PRG E G P NP G P SA APGI G GP P Sbjct: 314 RGPEGAQGPRG---EPGTPGSPGPAGASGNPGTDGIPGAKGSAGAPGIAGAPGFPGPRGP 370 Query: 173 LTP 165 P Sbjct: 371 PDP 373
>BAB1_DROME (Q9W0K7) Protein bric-a-brac 1| Length = 977 Score = 27.7 bits (60), Expect = 6.9 Identities = 11/25 (44%), Positives = 12/25 (48%) Frame = +2 Query: 5 PPPKTPHRELSPRPXPPRAAHGDHH 79 P P PH SP P P + A HH Sbjct: 398 PLPLHPHHHASPAPHPSQTAGSAHH 422
>RP3A_RAT (P47709) Rabphilin-3A (Exophilin-1)| Length = 684 Score = 27.7 bits (60), Expect = 6.9 Identities = 20/58 (34%), Positives = 22/58 (37%) Frame = -2 Query: 347 HNHGRGPALLPRGLHREVGRPRHQQVIPDRPNPAPVGSPVESHSAAAPGICGHGPSAP 174 H HG G R E G R V RP PA + SP PG G +AP Sbjct: 250 HGHGGGAGDTSRSPGGEQGLRRANSVQASRPAPASMPSPAPP-QPVQPGPPGGSRAAP 306
>EFS_HUMAN (O43281) Embryonal Fyn-associated substrate (HEFS)| Length = 561 Score = 27.3 bits (59), Expect = 9.0 Identities = 16/42 (38%), Positives = 20/42 (47%) Frame = -2 Query: 290 RPRHQQVIPDRPNPAPVGSPVESHSAAAPGICGHGPSAPLTP 165 RP +P+ P+P+PV SP APG G PL P Sbjct: 305 RPLPALPVPEAPSPSPVPSP-------APGRKGSIQDRPLPP 339
>ATG4D_MOUSE (Q8BGV9) Cysteine protease ATG4D (EC 3.4.22.-) (Autophagy-related| protein 4 homolog D) (Autophagin-4) (Autophagy-related cysteine endopeptidase 4) (AUT-like 4 cysteine endopeptidase) Length = 474 Score = 27.3 bits (59), Expect = 9.0 Identities = 18/39 (46%), Positives = 19/39 (48%) Frame = -2 Query: 290 RPRHQQVIPDRPNPAPVGSPVESHSAAAPGICGHGPSAP 174 RPR Q IPD N P GS V AA G G P+ P Sbjct: 26 RPRGQTRIPDPSNLGPSGSGV-----AALGSSGTDPAEP 59
>COL13_CAEEL (P20631) Cuticle collagen 13 precursor| Length = 316 Score = 27.3 bits (59), Expect = 9.0 Identities = 15/39 (38%), Positives = 18/39 (46%), Gaps = 4/39 (10%) Frame = -2 Query: 269 IPDRPNPA----PVGSPVESHSAAAPGICGHGPSAPLTP 165 +P P PA P G P + +A APG G P TP Sbjct: 204 LPGPPGPAGPPGPAGQPGSNGNAGAPGAPGQVVDVPGTP 242
>COL12_CAEEL (P20630) Cuticle collagen 12 precursor| Length = 316 Score = 27.3 bits (59), Expect = 9.0 Identities = 15/39 (38%), Positives = 18/39 (46%), Gaps = 4/39 (10%) Frame = -2 Query: 269 IPDRPNPA----PVGSPVESHSAAAPGICGHGPSAPLTP 165 +P P PA P G P + +A APG G P TP Sbjct: 204 LPGPPGPAGPPGPAGQPGSNGNAGAPGAPGQVVDVPGTP 242
>CO2A1_BOVIN (P02459) Collagen alpha-1(II) chain precursor (Fragments)| Length = 747 Score = 27.3 bits (59), Expect = 9.0 Identities = 25/63 (39%), Positives = 25/63 (39%), Gaps = 6/63 (9%) Frame = -2 Query: 335 RGP--ALLPRGLHREVGRPRHQQVIPDRPNPAPVGSPVESHSAAAPGICG----HGPSAP 174 RGP A PRG E G P NP G P SA APGI G GP P Sbjct: 198 RGPEGAQGPRG---EPGTPGSPGPAGAAGNPGTDGIPGAKGSAGAPGIAGAPGFPGPRGP 254 Query: 173 LTP 165 P Sbjct: 255 PGP 257
>ZO1_HUMAN (Q07157) Tight junction protein ZO-1 (Zonula occludens 1 protein)| (Zona occludens 1 protein) (Tight junction protein 1) Length = 1748 Score = 27.3 bits (59), Expect = 9.0 Identities = 15/51 (29%), Positives = 21/51 (41%) Frame = -2 Query: 356 EPLHNHGRGPALLPRGLHREVGRPRHQQVIPDRPNPAPVGSPVESHSAAAP 204 EPLH P L+P H+ P + + +P P P + E A P Sbjct: 1215 EPLHGAAAVPPLIPSSQHKPEALPSNTKPLP----PPPTQTEEEEDPAMKP 1261
>ZNF71_HUMAN (Q9NQZ8) Endothelial zinc finger protein induced by tumor necrosis| factor alpha (Zinc finger protein 71) (ZNF47) Length = 489 Score = 27.3 bits (59), Expect = 9.0 Identities = 11/23 (47%), Positives = 13/23 (56%), Gaps = 2/23 (8%) Frame = +1 Query: 184 GPWPHMP--GAAAEWDSTGLPTG 246 G WP P A AEW+ G+P G Sbjct: 42 GSWPERPRGDAGAEWEPLGIPQG 64
>GAG_HTL1M (P14077) Gag polyprotein [Contains: Major core protein p19; Major| core protein p24; Nucleic acid-binding protein p15] Length = 428 Score = 27.3 bits (59), Expect = 9.0 Identities = 18/54 (33%), Positives = 22/54 (40%), Gaps = 5/54 (9%) Frame = -2 Query: 344 NHGRGPALLPRGLHREVGRPRH-----QQVIPDRPNPAPVGSPVESHSAAAPGI 198 N+ +LLP+G V H Q IP RP P P SP + P I Sbjct: 63 NYSLLASLLPKGYPGRVNEILHILIQTQAQIPSRPAPPPPSSPTHDPPDSDPQI 116
>BCL9_MOUSE (Q9D219) B-cell lymphoma 9 protein (Bcl-9)| Length = 1425 Score = 27.3 bits (59), Expect = 9.0 Identities = 13/38 (34%), Positives = 18/38 (47%) Frame = -2 Query: 287 PRHQQVIPDRPNPAPVGSPVESHSAAAPGICGHGPSAP 174 PR +P P PVG+P + +P + GH P P Sbjct: 1281 PRMGLALPGMGGPGPVGTP-DIPLGTSPSMPGHNPMRP 1317
>GAG_HTL1A (P03345) Gag polyprotein [Contains: Major core protein p19; Major| core protein p24; Nucleic acid-binding protein p15] Length = 429 Score = 27.3 bits (59), Expect = 9.0 Identities = 18/54 (33%), Positives = 22/54 (40%), Gaps = 5/54 (9%) Frame = -2 Query: 344 NHGRGPALLPRGLHREVGRPRH-----QQVIPDRPNPAPVGSPVESHSAAAPGI 198 N+ +LLP+G V H Q IP RP P P SP + P I Sbjct: 64 NYSLLASLLPKGYPGRVNEILHILIQTQAQIPSRPAPPPPSSPTHDPPDSDPQI 117
>ZO1_MOUSE (P39447) Tight junction protein ZO-1 (Zonula occludens 1 protein)| (Zona occludens 1 protein) (Tight junction protein 1) Length = 1745 Score = 27.3 bits (59), Expect = 9.0 Identities = 13/32 (40%), Positives = 17/32 (53%) Frame = -2 Query: 326 ALLPRGLHREVGRPRHQQVIPDRPNPAPVGSP 231 A LP G H E +P H Q P+ P+ + G P Sbjct: 1372 AHLPAGHHSEPAKPVHSQSQPNFPSYSSKGKP 1403
>HRG_RABIT (Q28640) Histidine-rich glycoprotein precursor| (Histidine-proline-rich glycoprotein) (HPRG) (Fragment) Length = 526 Score = 27.3 bits (59), Expect = 9.0 Identities = 19/60 (31%), Positives = 20/60 (33%) Frame = -2 Query: 353 PLHNHGRGPALLPRGLHREVGRPRHQQVIPDRPNPAPVGSPVESHSAAAPGICGHGPSAP 174 P +H GP P G PRH P P G P H P GH P P Sbjct: 340 PHGHHPHGPP--PHGHPPHGPPPRHPPHGPPPHGHPPHGPPPHGHPPHGPPPHGHPPHGP 397
>COIA1_HUMAN (P39060) Collagen alpha-1(XVIII) chain precursor [Contains:| Endostatin] Length = 1516 Score = 27.3 bits (59), Expect = 9.0 Identities = 19/51 (37%), Positives = 23/51 (45%), Gaps = 1/51 (1%) Frame = -2 Query: 314 RGLHREVGRPRHQQVIPDRPNPAPVGSPVESHSAAAPGICG-HGPSAPLTP 165 +G E G P H+ + P P G+ ES A APG G GP P P Sbjct: 735 KGSLGEAGAPGHKG---SKGAPGPAGARGESGLAGAPGPAGPPGPPGPPGP 782
>APC_XENLA (P70039) Adenomatous polyposis coli homolog (Protein APC)| Length = 2829 Score = 27.3 bits (59), Expect = 9.0 Identities = 15/55 (27%), Positives = 26/55 (47%), Gaps = 2/55 (3%) Frame = -2 Query: 341 HGRGPALLPRGLHREVGRPRHQQVIPDRPNPAPVGSPVES--HSAAAPGICGHGP 183 +G P+ P G + R + RP+P P+ P++S ++ +PG G P Sbjct: 2282 YGSRPSSTPGGSSKGNSRSGSRDSASSRPSPQPLSRPLQSPGRNSISPGKNGISP 2336
>ENAH_MOUSE (Q03173) Protein enabled homolog (NPC-derived proline-rich protein| 1) (NDPP-1) Length = 802 Score = 27.3 bits (59), Expect = 9.0 Identities = 11/21 (52%), Positives = 12/21 (57%) Frame = +2 Query: 2 PPPPKTPHRELSPRPXPPRAA 64 PPPP P L P P PP A+ Sbjct: 447 PPPPPPPPPPLPPPPLPPLAS 467
>DDEF1_MOUSE (Q9QWY8) 130-kDa phosphatidylinositol 4,5-biphosphate-dependent ARF1| GTPase-activating protein (PIP2-dependent ARF1 GAP) (ADP-ribosylation factor-directed GTPase-activating protein 1) (ARF GTPase-activating protein 1) (Development and differe Length = 1147 Score = 27.3 bits (59), Expect = 9.0 Identities = 22/75 (29%), Positives = 30/75 (40%), Gaps = 16/75 (21%) Frame = -2 Query: 353 PLHNHGRGP----ALLPRGLHREVGR------------PRHQQVIPDRPNPAPVGSPVES 222 P N G+GP + LP G G P H++ + D P+P P G P Sbjct: 809 PPRNAGKGPTGPPSTLPLGTQTSSGSSTLSKKRPPPPPPGHKRTLSDPPSPLPHGPP--- 865 Query: 221 HSAAAPGICGHGPSA 177 + A P GPS+ Sbjct: 866 NKGAIPWGNDVGPSS 880
>TROAP_HUMAN (Q12815) Trophinin-associated protein (Tastin) (Trophinin-assisting| protein) Length = 778 Score = 27.3 bits (59), Expect = 9.0 Identities = 14/49 (28%), Positives = 19/49 (38%) Frame = -2 Query: 320 LPRGLHREVGRPRHQQVIPDRPNPAPVGSPVESHSAAAPGICGHGPSAP 174 +P +RE+ R P+PAPV P+ H P G P Sbjct: 285 VPLRENREMSHTRDSHDSHLMPSPAPVAQPLPGHVVPCPSPFGRAQRVP 333 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 38,822,281 Number of Sequences: 219361 Number of extensions: 779163 Number of successful extensions: 5869 Number of sequences better than 10.0: 76 Number of HSP's better than 10.0 without gapping: 4158 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5763 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 1370455656 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
