ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal9p07
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1CBP23_HORVU (P52711) Serine carboxypeptidase II-3 precursor (EC ... 57 1e-08
2CBP21_HORVU (P55747) Serine carboxypeptidase II-1 precursor (EC ... 33 0.22
3VPE_SOYBN (P49045) Vacuolar processing enzyme precursor (EC 3.4.... 28 9.4

>CBP23_HORVU (P52711) Serine carboxypeptidase II-3 precursor (EC 3.4.16.6)|
           (CP-MII.3) [Contains: Serine carboxypeptidase II-3 chain
           A; Serine carboxypeptidase II-3 chain B]
          Length = 516

 Score = 57.4 bits (137), Expect = 1e-08
 Identities = 24/26 (92%), Positives = 24/26 (92%)
 Frame = +3

Query: 3   NAVINDWTDSKGMYDFFWTHALIXXE 80
           NAVINDWTDSKGMYDFFWTHALI  E
Sbjct: 266 NAVINDWTDSKGMYDFFWTHALISDE 291



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>CBP21_HORVU (P55747) Serine carboxypeptidase II-1 precursor (EC 3.4.16.6)|
           (CP-MII.1) [Contains: Serine carboxypeptidase II-1 chain
           A; Serine carboxypeptidase II-1 chain B] (Fragment)
          Length = 324

 Score = 33.1 bits (74), Expect = 0.22
 Identities = 12/26 (46%), Positives = 19/26 (73%)
 Frame = +3

Query: 3   NAVINDWTDSKGMYDFFWTHALIXXE 80
           NAVI+D+ D  G ++++WTH LI  +
Sbjct: 75  NAVIDDYHDFVGTFEYWWTHGLISDD 100



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>VPE_SOYBN (P49045) Vacuolar processing enzyme precursor (EC 3.4.22.-) (VPE)|
          Length = 495

 Score = 27.7 bits (60), Expect = 9.4
 Identities = 10/33 (30%), Positives = 19/33 (57%)
 Frame = +3

Query: 3   NAVINDWTDSKGMYDFFWTHALIXXEHGRRHQQ 101
           +++++DWT  K M   F TH     ++G +H +
Sbjct: 423 SSLVDDWTCLKSMVRVFETHCGTLTQYGMKHMR 455


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.294    0.125    0.334 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,838,417
Number of Sequences: 219361
Number of extensions: 49990
Number of successful extensions: 59
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 59
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 59
length of database: 80,573,946
effective HSP length: 13
effective length of database: 77,722,253
effective search space used: 1865334072
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 17 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 44 (21.7 bits)
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