ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal9p05
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1gb|AC009869.7| Homo sapiens chromosome 11, clone RP11-222N13, co... 44 0.19
2gb|AC013562.6| Homo sapiens chromosome 8, clone RP11-313C15, com... 40 3.0
3gb|AC026970.7| Homo sapiens chromosome 11, clone RP11-472K20, co... 40 3.0
4gb|AC022858.8| Homo sapiens chromosome 8, clone RP11-326E22, com... 40 3.0
5emb|AL671935.30| Mouse DNA sequence from clone RP23-421J13 on ch... 40 3.0
6gb|AC090692.9| Homo sapiens chromosome 11, clone RP11-698N11, co... 40 3.0

>gb|AC009869.7| Homo sapiens chromosome 11, clone RP11-222N13, complete sequence
          Length = 192696

 Score = 44.1 bits (22), Expect = 0.19
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 107   agagatgtgttgtgcccagccc 128
             ||||||||||||||||||||||
Sbjct: 26257 agagatgtgttgtgcccagccc 26236



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>gb|AC013562.6| Homo sapiens chromosome 8, clone RP11-313C15, complete sequence
          Length = 188755

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 63    tattccttcccttctgttgt 82
             ||||||||||||||||||||
Sbjct: 83694 tattccttcccttctgttgt 83713



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>gb|AC026970.7| Homo sapiens chromosome 11, clone RP11-472K20, complete sequence
          Length = 132987

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 117   tgtgcccagcccagtgctag 136
             ||||||||||||||||||||
Sbjct: 85214 tgtgcccagcccagtgctag 85233



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>gb|AC022858.8| Homo sapiens chromosome 8, clone RP11-326E22, complete sequence
          Length = 187340

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 117   tgtgcccagcccagtgctag 136
             ||||||||||||||||||||
Sbjct: 44098 tgtgcccagcccagtgctag 44117



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>emb|AL671935.30| Mouse DNA sequence from clone RP23-421J13 on chromosome X, complete
              sequence
          Length = 194258

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 37     tgatggctggattattaggt 56
              ||||||||||||||||||||
Sbjct: 175152 tgatggctggattattaggt 175133



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>gb|AC090692.9| Homo sapiens chromosome 11, clone RP11-698N11, complete sequence
          Length = 179494

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 117   tgtgcccagcccagtgctag 136
             ||||||||||||||||||||
Sbjct: 16597 tgtgcccagcccagtgctag 16616


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,552,448
Number of Sequences: 3902068
Number of extensions: 1552448
Number of successful extensions: 26371
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 26363
Number of HSP's gapped (non-prelim): 8
length of query: 233
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 211
effective length of database: 17,147,199,772
effective search space: 3618059151892
effective search space used: 3618059151892
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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