ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal9o11
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK105174.1| Oryza sativa (japonica cultivar-group) cDNA clon... 111 2e-21
2dbj|AK071521.1| Oryza sativa (japonica cultivar-group) cDNA clon... 111 2e-21
3ref|NM_192278.1| Oryza sativa (japonica cultivar-group), predic... 84 4e-13
4dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 84 4e-13
5dbj|AP003725.3| Oryza sativa (japonica cultivar-group) genomic D... 84 4e-13
6dbj|AP003855.3| Oryza sativa (japonica cultivar-group) genomic D... 84 4e-13
7gb|AC153954.3| Mus musculus 10 BAC RP24-236E2 (Roswell Park Canc... 46 0.093
8emb|BX547936.5| Mouse DNA sequence from clone RP23-109A11 on chr... 46 0.093
9emb|CR555305.5| Mouse DNA sequence from clone CH25-525H24 on chr... 44 0.37
10gb|AC175052.2| Mus musculus chromosome 19, clone wi1-2093M24, co... 44 0.37
11emb|AL671916.5| Mouse DNA sequence from clone RP23-294O1 on chro... 44 0.37
12emb|AL672204.7| Mouse DNA sequence from clone RP23-325N6 on chro... 44 0.37
13emb|BX927152.1| Corynebacterium glutamicum ATCC 13032, IS finger... 42 1.5
14gb|AC080100.7| Homo sapiens chromosome 11, clone RP11-454H19, co... 42 1.5
15gb|AC099015.1| Drosophila melanogaster, chromosome 2R, region 48... 42 1.5
16gb|AC154175.2| Ornithorhynchus anatinus chromosome UNK clone OAB... 42 1.5
17dbj|BA000036.3| Corynebacterium glutamicum ATCC 13032 DNA, compl... 42 1.5
18gb|AC011742.3| Homo sapiens BAC clone RP11-214J9 from 2, complet... 42 1.5
19gb|AY105604.1| Zea mays PCO129373 mRNA sequence 42 1.5
20gb|AE003824.3| Drosophila melanogaster chromosome 2R, section 26... 42 1.5
21gb|AC005467.1|AC005467 Drosophila melanogaster, chromosome 2R, r... 42 1.5
22emb|AL772160.8| Mouse DNA sequence from clone RP23-85H5 on chrom... 42 1.5
23gb|AC149057.7| Mus musculus BAC clone RP23-345D18 from chromosom... 40 5.7
24gb|AC119877.9| Mus musculus chromosome 3, clone RP24-324H23, com... 40 5.7
25gb|AC186367.2| Gallus gallus BAC clone TAM31-55N19 from chromoso... 40 5.7
26gb|CP000117.1| Anabaena variabilis ATCC 29413 chromosome, comple... 40 5.7
27gb|AC133602.3| Mus musculus BAC clone RP24-255I9 from chromosome... 40 5.7
28gb|AC127545.4| Mus musculus BAC clone RP24-562H22 from chromosom... 40 5.7
29gb|AC123857.4| Mus musculus BAC clone RP23-344L21 from chromosom... 40 5.7
30gb|AC122520.2| Mus musculus BAC clone RP24-470M22 from 6, comple... 40 5.7
31gb|AC111140.11| Mus musculus chromosome 3, clone RP23-369L16, co... 40 5.7
32gb|AC102604.13| Mus musculus chromosome 19, clone RP23-385L22, c... 40 5.7
33emb|AL672032.6| Human DNA sequence from clone RP11-308B5 on chro... 40 5.7
34emb|AL603783.14| Human DNA sequence from clone RP11-216B13 on ch... 40 5.7
35emb|AL390205.17| Human DNA sequence from clone RP11-15H7 on chro... 40 5.7
36ref|XM_784164.1| PREDICTED: Strongylocentrotus purpuratus simila... 40 5.7
37ref|XM_783415.1| PREDICTED: Strongylocentrotus purpuratus simila... 40 5.7
38emb|AL645846.12| Mouse DNA sequence from clone RP23-244C22 on ch... 40 5.7
39gb|AC154210.2| Mus musculus BAC clone RP24-113C3 from chromosome... 40 5.7
40gb|AC151734.3| Mus musculus BAC clone RP23-22O15 from chromosome... 40 5.7
41gb|AC090610.6| Homo sapiens chromosome 17, clone RP11-493I24, co... 40 5.7
42dbj|AP003380.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.7
43gb|AF331848.1| Mus musculus trophinin gene, complete cds 40 5.7
44gb|AC002091.2| Homo sapiens chromosome 17, clone CTB-41I6, compl... 40 5.7
45gb|AC163646.2| Mus musculus BAC clone RP23-207D1 from chromosome... 40 5.7
46dbj|AK020404.1| Mus musculus 12 days embryo embryonic body betwe... 40 5.7
47gb|AC159632.2| Mus musculus BAC clone RP24-161A16 from chromosom... 40 5.7
48gb|AC010917.16|AC010917 Drosophila melanogaster, chromosome X, r... 40 5.7
49gb|AC011706.14|AC011706 Drosophila melanogaster, chromosome X, r... 40 5.7
50gb|AC154249.2| Mus musculus BAC clone RP24-188L2 from chromosome... 40 5.7
51gb|AC149055.6| Mus musculus BAC clone RP23-358K1 from chromosome... 40 5.7
52gb|AF282508.2|AF282508 Homo sapiens clone 2ptel_c12t3 sequence 40 5.7
53gb|AC079779.7| Homo sapiens BAC clone RP11-356M6 from 2, complet... 40 5.7
54gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 40 5.7
55dbj|AP006531.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.7
56dbj|BA000019.2| Nostoc sp. PCC 7120 DNA, complete genome 40 5.7
57gb|BC087832.1| Mus musculus C1q and tumor necrosis factor relate... 40 5.7
58emb|AL672150.19| Mouse DNA sequence from clone RP23-338A17 on ch... 40 5.7
59gb|AE003570.4| Drosophila melanogaster chromosome X, section 69 ... 40 5.7
60gb|AF042276.1|AF042276 Pseudomonas putida o251 homolog, poly(hyd... 40 5.7
61gb|AC123702.11| Mus musculus chromosome 19, clone RP23-341D12, c... 40 5.7
62gb|U25847.1|HSACP1S1 Human red cell-type low molecular weight ac... 40 5.7
63gb|AC167242.4| Mus musculus BAC clone RP24-354I16 from chromosom... 40 5.7
64emb|CT030241.6| Mouse DNA sequence from clone RP23-377I11 on chr... 40 5.7
65gb|AC165340.3| Mus musculus BAC clone RP24-63G4 from chromosome ... 40 5.7
66emb|AL672241.6| Mouse DNA sequence from clone RP23-147D3 on chro... 40 5.7
67emb|AL683888.10| Mouse DNA sequence from clone RP23-462C12 on ch... 40 5.7
68emb|AL844895.6| Mouse DNA sequence from clone RP23-359N12 on chr... 40 5.7 
>dbj|AK105174.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-104-H01, full
           insert sequence
          Length = 458

 Score =  111 bits (56), Expect = 2e-21
 Identities = 110/128 (85%)
 Strand = Plus / Plus

                                                                       
Query: 133 ctgcaaagctcagtaacacggcgaccaagccagcagccgccaagggcggcatcaagaagg 192
           |||| ||||||||| | |||||||| ||||| || ||||||||||||||| |||||||||
Sbjct: 129 ctgccaagctcagtgagacggcgacgaagcccgcggccgccaagggcggcgtcaagaagg 188

                                                                       
Query: 193 ctgagtcaaagccacgggagcctaagaagagggtcaagagcaccaagccagcagcagcaa 252
           |||||   ||||| |||||||| ||||||| ||| ||||||| |||||| || ||||| |
Sbjct: 189 ctgagcagaagccccgggagcccaagaagaaggtgaagagcagcaagccggcggcagcca 248

                   
Query: 253 aaaactga 260
           ||||||||
Sbjct: 249 aaaactga 256



 Score = 44.1 bits (22), Expect = 0.37
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 389 ccatgtgacgaatattacaaataaga 414
           |||||||| |||||||||||||||||
Sbjct: 414 ccatgtgatgaatattacaaataaga 439



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                    
Query: 47  aagaatggcatccctgaaggccgtgaagccaaccggacttg 87
           ||||||||| || |||||||||||||| ||  |||||||||
Sbjct: 76  aagaatggcttctctgaaggccgtgaaacctgccggacttg 116
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>dbj|AK071521.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023099A13, full
           insert sequence
          Length = 452

 Score =  111 bits (56), Expect = 2e-21
 Identities = 110/128 (85%)
 Strand = Plus / Plus

                                                                       
Query: 133 ctgcaaagctcagtaacacggcgaccaagccagcagccgccaagggcggcatcaagaagg 192
           |||| ||||||||| | |||||||| ||||| || ||||||||||||||| |||||||||
Sbjct: 130 ctgccaagctcagtgagacggcgacgaagcccgcggccgccaagggcggcgtcaagaagg 189

                                                                       
Query: 193 ctgagtcaaagccacgggagcctaagaagagggtcaagagcaccaagccagcagcagcaa 252
           |||||   ||||| |||||||| ||||||| ||| ||||||| |||||| || ||||| |
Sbjct: 190 ctgagcagaagccccgggagcccaagaagaaggtgaagagcagcaagccggcggcagcca 249

                   
Query: 253 aaaactga 260
           ||||||||
Sbjct: 250 aaaactga 257



 Score = 44.1 bits (22), Expect = 0.37
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 389 ccatgtgacgaatattacaaataaga 414
           |||||||| |||||||||||||||||
Sbjct: 415 ccatgtgatgaatattacaaataaga 440



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                    
Query: 47  aagaatggcatccctgaaggccgtgaagccaaccggacttg 87
           ||||||||| || |||||||||||||| ||  |||||||||
Sbjct: 77  aagaatggcttctctgaaggccgtgaaacctgccggacttg 117
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>ref|NM_192278.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 165

 Score = 83.8 bits (42), Expect = 4e-13
 Identities = 78/90 (86%)
 Strand = Plus / Plus

                                                                       
Query: 133 ctgcaaagctcagtaacacggcgaccaagccagcagccgccaagggcggcatcaagaagg 192
           |||| ||||||||| | |||||||| ||||| || ||||||||||||||| |||||||||
Sbjct: 50  ctgccaagctcagtgagacggcgacgaagcccgcggccgccaagggcggcgtcaagaagg 109

                                         
Query: 193 ctgagtcaaagccacgggagcctaagaaga 222
           |||||   ||||| |||||||| |||||||
Sbjct: 110 ctgagcagaagccccgggagcccaagaaga 139
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 83.8 bits (42), Expect = 4e-13
 Identities = 78/90 (86%)
 Strand = Plus / Minus

                                                                            
Query: 133      ctgcaaagctcagtaacacggcgaccaagccagcagccgccaagggcggcatcaagaagg 192
                |||| ||||||||| | |||||||| ||||| || ||||||||||||||| |||||||||
Sbjct: 25794823 ctgccaagctcagtgagacggcgacgaagcccgcggccgccaagggcggcgtcaagaagg 25794764

                                              
Query: 193      ctgagtcaaagccacgggagcctaagaaga 222
                |||||   ||||| |||||||| |||||||
Sbjct: 25794763 ctgagcagaagccccgggagcccaagaaga 25794734



 Score = 44.1 bits (22), Expect = 0.37
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                          
Query: 389      ccatgtgacgaatattacaaataaga 414
                |||||||| |||||||||||||||||
Sbjct: 25794420 ccatgtgatgaatattacaaataaga 25794395



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                         
Query: 47       aagaatggcatccctgaaggccgtgaagccaaccggacttg 87
                ||||||||| || |||||||||||||| ||  |||||||||
Sbjct: 25794876 aagaatggcttctctgaaggccgtgaaacctgccggacttg 25794836



 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 333      tcccttcctctgtctcccat 352
                ||||||||||||||||||||
Sbjct: 39447983 tcccttcctctgtctcccat 39448002
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>dbj|AP003725.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0510C12
          Length = 177049

 Score = 83.8 bits (42), Expect = 4e-13
 Identities = 78/90 (86%)
 Strand = Plus / Minus

                                                                         
Query: 133   ctgcaaagctcagtaacacggcgaccaagccagcagccgccaagggcggcatcaagaagg 192
             |||| ||||||||| | |||||||| ||||| || ||||||||||||||| |||||||||
Sbjct: 34747 ctgccaagctcagtgagacggcgacgaagcccgcggccgccaagggcggcgtcaagaagg 34688

                                           
Query: 193   ctgagtcaaagccacgggagcctaagaaga 222
             |||||   ||||| |||||||| |||||||
Sbjct: 34687 ctgagcagaagccccgggagcccaagaaga 34658



 Score = 44.1 bits (22), Expect = 0.37
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 389   ccatgtgacgaatattacaaataaga 414
             |||||||| |||||||||||||||||
Sbjct: 34344 ccatgtgatgaatattacaaataaga 34319



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                      
Query: 47    aagaatggcatccctgaaggccgtgaagccaaccggacttg 87
             ||||||||| || |||||||||||||| ||  |||||||||
Sbjct: 34800 aagaatggcttctctgaaggccgtgaaacctgccggacttg 34760
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>dbj|AP003855.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0039G05
          Length = 138429

 Score = 83.8 bits (42), Expect = 4e-13
 Identities = 78/90 (86%)
 Strand = Plus / Minus

                                                                         
Query: 133   ctgcaaagctcagtaacacggcgaccaagccagcagccgccaagggcggcatcaagaagg 192
             |||| ||||||||| | |||||||| ||||| || ||||||||||||||| |||||||||
Sbjct: 97287 ctgccaagctcagtgagacggcgacgaagcccgcggccgccaagggcggcgtcaagaagg 97228

                                           
Query: 193   ctgagtcaaagccacgggagcctaagaaga 222
             |||||   ||||| |||||||| |||||||
Sbjct: 97227 ctgagcagaagccccgggagcccaagaaga 97198



 Score = 44.1 bits (22), Expect = 0.37
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 389   ccatgtgacgaatattacaaataaga 414
             |||||||| |||||||||||||||||
Sbjct: 96884 ccatgtgatgaatattacaaataaga 96859



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                      
Query: 47    aagaatggcatccctgaaggccgtgaagccaaccggacttg 87
             ||||||||| || |||||||||||||| ||  |||||||||
Sbjct: 97340 aagaatggcttctctgaaggccgtgaaacctgccggacttg 97300
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>gb|AC153954.3| Mus musculus 10 BAC RP24-236E2 (Roswell Park Cancer Institute (C57BL/6J
             Male) Mouse BAC Library) complete sequence
          Length = 151818

 Score = 46.1 bits (23), Expect = 0.093
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 333   tcccttcctctgtctcccatgat 355
             |||||||||||||||||||||||
Sbjct: 73352 tcccttcctctgtctcccatgat 73330
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>emb|BX547936.5| Mouse DNA sequence from clone RP23-109A11 on chromosome X, complete
             sequence
          Length = 70333

 Score = 46.1 bits (23), Expect = 0.093
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 333   tcccttcctctgtctcccatgat 355
             |||||||||||||||||||||||
Sbjct: 34682 tcccttcctctgtctcccatgat 34704
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>emb|CR555305.5| Mouse DNA sequence from clone CH25-525H24 on chromosome 11, complete
             sequence
          Length = 121111

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 334   cccttcctctgtctcccatgat 355
             ||||||||||||||||||||||
Sbjct: 51475 cccttcctctgtctcccatgat 51454
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>gb|AC175052.2| Mus musculus chromosome 19, clone wi1-2093M24, complete sequence
          Length = 37627

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 334  cccttcctctgtctcccatgat 355
            ||||||||||||||||||||||
Sbjct: 4598 cccttcctctgtctcccatgat 4619
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>emb|AL671916.5| Mouse DNA sequence from clone RP23-294O1 on chromosome X, complete
             sequence
          Length = 205436

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 333   tcccttcctctgtctcccatga 354
             ||||||||||||||||||||||
Sbjct: 28776 tcccttcctctgtctcccatga 28797
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>emb|AL672204.7| Mouse DNA sequence from clone RP23-325N6 on chromosome X, complete
             sequence
          Length = 129254

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 333   tcccttcctctgtctcccatga 354
             ||||||||||||||||||||||
Sbjct: 49575 tcccttcctctgtctcccatga 49554



 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 332    ttcccttcctctgtctcccatgat 355
              |||||| |||||||||||||||||
Sbjct: 100801 ttccctccctctgtctcccatgat 100824
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>emb|BX927152.1| Corynebacterium glutamicum ATCC 13032, IS fingerprint type 4-5, complete
              genome; segment 5/10
          Length = 349799

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 141    ctcagtaacacggcgaccaag 161
              |||||||||||||||||||||
Sbjct: 274756 ctcagtaacacggcgaccaag 274736
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>gb|AC080100.7| Homo sapiens chromosome 11, clone RP11-454H19, complete sequence
          Length = 149466

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 328   gcctttcccttcctctgtctc 348
             |||||||||||||||||||||
Sbjct: 82634 gcctttcccttcctctgtctc 82654
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>gb|AC099015.1| Drosophila melanogaster, chromosome 2R, region 48C-49A, BAC clone
             BACR26P21, complete sequence
          Length = 157010

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 258   tgacaacggcagcaggagaac 278
             |||||||||||||||||||||
Sbjct: 29705 tgacaacggcagcaggagaac 29685
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>gb|AC154175.2| Ornithorhynchus anatinus chromosome UNK clone OABb-419P24, complete
              sequence
          Length = 163751

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 329    cctttcccttcctctgtctcccatg 353
              ||||||||| |||||||||||||||
Sbjct: 108984 cctttccctccctctgtctcccatg 108960
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>dbj|BA000036.3| Corynebacterium glutamicum ATCC 13032 DNA, complete genome
          Length = 3309401

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 141     ctcagtaacacggcgaccaag 161
               |||||||||||||||||||||
Sbjct: 1668981 ctcagtaacacggcgaccaag 1668961
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>gb|AC011742.3| Homo sapiens BAC clone RP11-214J9 from 2, complete sequence
          Length = 181210

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 327    tgcctttcccttcctctgtct 347
              |||||||||||||||||||||
Sbjct: 167374 tgcctttcccttcctctgtct 167354
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>gb|AY105604.1| Zea mays PCO129373 mRNA sequence
          Length = 668

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 48/57 (84%)
 Strand = Plus / Plus

                                                                    
Query: 50  aatggcatccctgaaggccgtgaagccaaccggacttgaagggcaggccaaggagcc 106
           |||||| ||||||||||||| |||||| | |||| |||  | ||||| |||||||||
Sbjct: 80  aatggcttccctgaaggccgcgaagcccagcggagttgcggcgcagggcaaggagcc 136
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>gb|AE003824.3| Drosophila melanogaster chromosome 2R, section 26 of 73 of the complete
             sequence
          Length = 268836

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 258   tgacaacggcagcaggagaac 278
             |||||||||||||||||||||
Sbjct: 36701 tgacaacggcagcaggagaac 36681
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>gb|AC005467.1|AC005467 Drosophila melanogaster, chromosome 2R, region 48C1-48C2, P1 clone
             DS00568, complete sequence
          Length = 62091

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 258   tgacaacggcagcaggagaac 278
             |||||||||||||||||||||
Sbjct: 16806 tgacaacggcagcaggagaac 16826
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>emb|AL772160.8| Mouse DNA sequence from clone RP23-85H5 on chromosome 4, complete
             sequence
          Length = 228375

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 332   ttcccttcctctgtctcccatgata 356
             |||||| ||||||||||||||||||
Sbjct: 64526 ttccctccctctgtctcccatgata 64502
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>gb|AC149057.7| Mus musculus BAC clone RP23-345D18 from chromosome 7, complete sequence
          Length = 189323

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 329   cctttcccttcctctgtctcccat 352
             |||| |||||||||||||||||||
Sbjct: 17081 ccttccccttcctctgtctcccat 17104
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>gb|AC119877.9| Mus musculus chromosome 3, clone RP24-324H23, complete sequence
          Length = 155784

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 324   tcctgcctttcccttcctct 343
             ||||||||||||||||||||
Sbjct: 25400 tcctgcctttcccttcctct 25419
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>gb|AC186367.2| Gallus gallus BAC clone TAM31-55N19 from chromosome 17, complete sequence
          Length = 181509

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 324    tcctgcctttcccttcctct 343
              ||||||||||||||||||||
Sbjct: 117687 tcctgcctttcccttcctct 117668
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>gb|CP000117.1| Anabaena variabilis ATCC 29413 chromosome, complete sequence
          Length = 6365727

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 195     gagtcaaagccacgggagcc 214
               ||||||||||||||||||||
Sbjct: 6235512 gagtcaaagccacgggagcc 6235493
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>gb|AC133602.3| Mus musculus BAC clone RP24-255I9 from chromosome 15, complete sequence
          Length = 155411

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 333    tcccttcctctgtctcccatgata 356
              |||||||||||| |||||||||||
Sbjct: 140903 tcccttcctctgcctcccatgata 140926
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>gb|AC127545.4| Mus musculus BAC clone RP24-562H22 from chromosome 19, complete sequence
          Length = 146015

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 327    tgcctttcccttcctctgtc 346
              ||||||||||||||||||||
Sbjct: 145208 tgcctttcccttcctctgtc 145227
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>gb|AC123857.4| Mus musculus BAC clone RP23-344L21 from chromosome 13, complete
             sequence
          Length = 192371

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 331   tttcccttcctctgtctccc 350
             ||||||||||||||||||||
Sbjct: 65100 tttcccttcctctgtctccc 65081
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>gb|AC122520.2| Mus musculus BAC clone RP24-470M22 from 6, complete sequence
          Length = 153520

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 333   tcccttcctctgtctcccatgata 356
             |||||||||||| |||||||||||
Sbjct: 77981 tcccttcctctgactcccatgata 77958
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>gb|AC111140.11| Mus musculus chromosome 3, clone RP23-369L16, complete sequence
          Length = 236182

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 324   tcctgcctttcccttcctct 343
             ||||||||||||||||||||
Sbjct: 18407 tcctgcctttcccttcctct 18388
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>gb|AC102604.13| Mus musculus chromosome 19, clone RP23-385L22, complete sequence
          Length = 212387

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 327    tgcctttcccttcctctgtc 346
              ||||||||||||||||||||
Sbjct: 163977 tgcctttcccttcctctgtc 163958
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>emb|AL672032.6| Human DNA sequence from clone RP11-308B5 on chromosome X Contains a novel
              gene, the 5' end of the PLAC1 gene for placenta-specific 1,
              a ribosomal protein L21 (RPL21) pseudogene, a ribosomal
              protein S7 (RPS7) pseudogene and the 3' end of the
              LOC169090 gene, complete sequence
          Length = 209317

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 324    tcctgcctttcccttcctctgtct 347
              ||||||||||| ||||||||||||
Sbjct: 122866 tcctgcctttcacttcctctgtct 122843
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>emb|AL603783.14| Human DNA sequence from clone RP11-216B13 on chromosome 6 Contains two
             CpG islands, complete sequence
          Length = 94482

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 189   aaggctgagtcaaagccacg 208
             ||||||||||||||||||||
Sbjct: 74915 aaggctgagtcaaagccacg 74896
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>emb|AL390205.17| Human DNA sequence from clone RP11-15H7 on chromosome 6 Contains an ATP
             synthase H+ transporting mitochondrial F0 complex subunit
             b variant 1 (ATP5F1) pseudogene and a thyroid hormone
             receptor interactor 4 (TRIP4) pseudogene, complete
             sequence
          Length = 155680

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 324   tcctgcctttcccttcctct 343
             ||||||||||||||||||||
Sbjct: 42833 tcctgcctttcccttcctct 42852
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>ref|XM_784164.1| PREDICTED: Strongylocentrotus purpuratus similar to Glutamate
           dehydrogenase 1, mitochondrial precursor (GDH) (Memory
           related protein-2) (MRG-2) (LOC584300), partial mRNA
          Length = 1443

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 170 cgccaagggcggcatcaaga 189
           ||||||||||||||||||||
Sbjct: 426 cgccaagggcggcatcaaga 445
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>ref|XM_783415.1| PREDICTED: Strongylocentrotus purpuratus similar to glutamate
           dehydrogenase 1 (LOC583508), mRNA
          Length = 1260

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 170 cgccaagggcggcatcaaga 189
           ||||||||||||||||||||
Sbjct: 234 cgccaagggcggcatcaaga 253
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>emb|AL645846.12| Mouse DNA sequence from clone RP23-244C22 on chromosome 11 Contains a
             novel gene, the Tob1 gene for transducer of ErbB-2.1, the
             gene for a novel protein (AY100450) (WFIKKN-like growth
             and differentiation factor-associated serum protein 1)
             (Gasp1), a novel gene, the gene for a novel protein
             (3300001P08Rik) (Luc7a) and one CpG island, complete
             sequence
          Length = 188962

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 328   gcctttcccttcctctgtctccca 351
             ||||| ||||||||||||||||||
Sbjct: 63943 gccttccccttcctctgtctccca 63920
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>gb|AC154210.2| Mus musculus BAC clone RP24-113C3 from chromosome 13, complete sequence
          Length = 193176

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 332    ttcccttcctctgtctccca 351
              ||||||||||||||||||||
Sbjct: 154855 ttcccttcctctgtctccca 154836
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>gb|AC151734.3| Mus musculus BAC clone RP23-22O15 from chromosome 15, complete sequence
          Length = 229862

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 333   tcccttcctctgtctcccatgata 356
             |||||||||||| |||||||||||
Sbjct: 99948 tcccttcctctgcctcccatgata 99971
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>gb|AC090610.6| Homo sapiens chromosome 17, clone RP11-493I24, complete sequence
          Length = 185980

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 252 aaaaactgacaacggcagca 271
           ||||||||||||||||||||
Sbjct: 366 aaaaactgacaacggcagca 385
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>dbj|AP003380.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
            clone:P0497A05
          Length = 130919

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 333  tcccttcctctgtctcccat 352
            ||||||||||||||||||||
Sbjct: 2425 tcccttcctctgtctcccat 2444
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>gb|AF331848.1| Mus musculus trophinin gene, complete cds
          Length = 16270

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 212   gcctaagaagagggtcaaga 231
             ||||||||||||||||||||
Sbjct: 15672 gcctaagaagagggtcaaga 15653
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>gb|AC002091.2| Homo sapiens chromosome 17, clone CTB-41I6, complete sequence
          Length = 161816

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 252    aaaaactgacaacggcagca 271
              ||||||||||||||||||||
Sbjct: 115520 aaaaactgacaacggcagca 115539
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>gb|AC163646.2| Mus musculus BAC clone RP23-207D1 from chromosome 14, complete sequence
          Length = 185289

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 332   ttcccttcctctgtctcccatgat 355
             |||| |||||||||||||||||||
Sbjct: 12683 ttcctttcctctgtctcccatgat 12660
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>dbj|AK020404.1| Mus musculus 12 days embryo embryonic body between diaphragm region
           and neck cDNA, RIKEN full-length enriched library,
           clone:9430004J15 product:unclassifiable, full insert
           sequence
          Length = 944

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 86  tgaagggcaggccaaggagc 105
           ||||||||||||||||||||
Sbjct: 306 tgaagggcaggccaaggagc 325
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>gb|AC159632.2| Mus musculus BAC clone RP24-161A16 from chromosome 12, complete sequence
          Length = 181229

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 333    tcccttcctctgtctcccatgata 356
              |||||||||||| |||||||||||
Sbjct: 112170 tcccttcctctgcctcccatgata 112147
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>gb|AC010917.16|AC010917 Drosophila melanogaster, chromosome X, region 19E-19E, BAC clone
             BACR28L06, complete sequence
          Length = 174820

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 243   gcagcagcaaaaaactgaca 262
             ||||||||||||||||||||
Sbjct: 43953 gcagcagcaaaaaactgaca 43972
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>gb|AC011706.14|AC011706 Drosophila melanogaster, chromosome X, region 19E-19E, BAC clone
           BACR03J18, complete sequence
          Length = 161614

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 243 gcagcagcaaaaaactgaca 262
           ||||||||||||||||||||
Sbjct: 824 gcagcagcaaaaaactgaca 843
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>gb|AC154249.2| Mus musculus BAC clone RP24-188L2 from chromosome 14, complete sequence
          Length = 149132

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 335    ccttcctctgtctcccatga 354
              ||||||||||||||||||||
Sbjct: 129802 ccttcctctgtctcccatga 129783
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>gb|AC149055.6| Mus musculus BAC clone RP23-358K1 from chromosome 7, complete sequence
          Length = 215193

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 9      tcttctgagccttccagtgc 28
              ||||||||||||||||||||
Sbjct: 184534 tcttctgagccttccagtgc 184553
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>gb|AF282508.2|AF282508 Homo sapiens clone 2ptel_c12t3 sequence
          Length = 766

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 327 tgcctttcccttcctctgtc 346
           ||||||||||||||||||||
Sbjct: 667 tgcctttcccttcctctgtc 686
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>gb|AC079779.7| Homo sapiens BAC clone RP11-356M6 from 2, complete sequence
          Length = 155399

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 327   tgcctttcccttcctctgtc 346
             ||||||||||||||||||||
Sbjct: 81595 tgcctttcccttcctctgtc 81614
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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 170     cgccaagggcggcatcaaga 189
               ||||||||||||||||||||
Sbjct: 2024363 cgccaagggcggcatcaaga 2024382
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>dbj|AP006531.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:B1417F08
          Length = 155536

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 333   tcccttcctctgtctcccat 352
             ||||||||||||||||||||
Sbjct: 22997 tcccttcctctgtctcccat 23016
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>dbj|BA000019.2| Nostoc sp. PCC 7120 DNA, complete genome
          Length = 6413771

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 195     gagtcaaagccacgggagcc 214
               ||||||||||||||||||||
Sbjct: 3980202 gagtcaaagccacgggagcc 3980183
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>gb|BC087832.1| Mus musculus C1q and tumor necrosis factor related protein 4, mRNA
            (cDNA clone IMAGE:30537512), with apparent retained
            intron
          Length = 4697

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 86   tgaagggcaggccaaggagc 105
            ||||||||||||||||||||
Sbjct: 2581 tgaagggcaggccaaggagc 2600
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>emb|AL672150.19| Mouse DNA sequence from clone RP23-338A17 on chromosome X, complete
             sequence
          Length = 196140

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 212   gcctaagaagagggtcaaga 231
             ||||||||||||||||||||
Sbjct: 93982 gcctaagaagagggtcaaga 94001
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>gb|AE003570.4| Drosophila melanogaster chromosome X, section 69 of 74 of the complete
              sequence
          Length = 300051

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 243    gcagcagcaaaaaactgaca 262
              ||||||||||||||||||||
Sbjct: 105189 gcagcagcaaaaaactgaca 105208
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>gb|AF042276.1|AF042276 Pseudomonas putida o251 homolog, poly(hydroxyalcanoate) granule
            associated protein GA1 (GA1), and poly(hydroxyalcanoate)
            granule associated protein GA2 (GA2) genes, complete cds;
            poly(hydroxyalkanoate) synthase (phaC2) gene, partial
            cds; and unknown genes
          Length = 5054

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 157  ccaagccagcagccgccaag 176
            ||||||||||||||||||||
Sbjct: 2570 ccaagccagcagccgccaag 2589
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>gb|AC123702.11| Mus musculus chromosome 19, clone RP23-341D12, complete sequence
          Length = 154959

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 326   ctgcctttcccttcctctgtctcc 349
             |||||||| |||||||||||||||
Sbjct: 18684 ctgcctttgccttcctctgtctcc 18707
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>gb|U25847.1|HSACP1S1 Human red cell-type low molecular weight acid phosphatase (ACP1)
            gene, 5' flanking region and exons 1-4
          Length = 10191

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 327  tgcctttcccttcctctgtc 346
            ||||||||||||||||||||
Sbjct: 7886 tgcctttcccttcctctgtc 7905
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>gb|AC167242.4| Mus musculus BAC clone RP24-354I16 from chromosome 7, complete sequence
          Length = 202422

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 329   cctttcccttcctctgtctcccat 352
             |||| |||||||||||||||||||
Sbjct: 52361 ccttccccttcctctgtctcccat 52338
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>emb|CT030241.6| Mouse DNA sequence from clone RP23-377I11 on chromosome 12, complete
            sequence
          Length = 216916

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 333  tcccttcctctgtctcccatgata 356
            |||||||||||| |||||||||||
Sbjct: 3795 tcccttcctctgcctcccatgata 3818
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>gb|AC165340.3| Mus musculus BAC clone RP24-63G4 from chromosome 7, complete sequence
          Length = 241077

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 9      tcttctgagccttccagtgc 28
              ||||||||||||||||||||
Sbjct: 206778 tcttctgagccttccagtgc 206759
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>emb|AL672241.6| Mouse DNA sequence from clone RP23-147D3 on chromosome 2, complete
             sequence
          Length = 197925

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 86    tgaagggcaggccaaggagc 105
             ||||||||||||||||||||
Sbjct: 36483 tgaagggcaggccaaggagc 36502
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>emb|AL683888.10| Mouse DNA sequence from clone RP23-462C12 on chromosome X, complete
              sequence
          Length = 200089

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 332    ttcccttcctctgtctcccatgat 355
              |||||||||||| |||||||||||
Sbjct: 190282 ttcccttcctctatctcccatgat 190259
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>emb|AL844895.6| Mouse DNA sequence from clone RP23-359N12 on chromosome 2, complete
              sequence
          Length = 210427

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 332    ttcccttcctctgtctcccatgat 355
              |||||||||||||||||| |||||
Sbjct: 186392 ttcccttcctctgtctccgatgat 186369


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,523,539
Number of Sequences: 3902068
Number of extensions: 4523539
Number of successful extensions: 83338
Number of sequences better than 10.0: 68
Number of HSP's better than 10.0 without gapping: 69
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 83124
Number of HSP's gapped (non-prelim): 214
length of query: 428
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 406
effective length of database: 17,147,199,772
effective search space: 6961763107432
effective search space used: 6961763107432
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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