ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal9o10 |
|---|---|
| Clone Library Name | barley_pub |
>IDHC_SOYBN (Q06197) Isocitrate dehydrogenase [NADP] (EC 1.1.1.42)| (Oxalosuccinate decarboxylase) (IDH) (NADP(+)-specific ICDH) (IDP) Length = 413 Score = 66.2 bits (160), Expect = 2e-11 Identities = 30/34 (88%), Positives = 32/34 (94%) Frame = +2 Query: 86 FEKIKVANPIVEMDGDEMTRVFWQSIKDKLIFPF 187 F+KIKVANPIVEMDGDEMTRV W+SIKDKLI PF Sbjct: 4 FQKIKVANPIVEMDGDEMTRVIWKSIKDKLILPF 37
>IDHP_MEDSA (Q40345) Isocitrate dehydrogenase [NADP], chloroplast precursor (EC| 1.1.1.42) (Oxalosuccinate decarboxylase) (IDH) (NADP(+)-specific ICDH) (IDP) (Fragment) Length = 433 Score = 65.9 bits (159), Expect = 3e-11 Identities = 29/34 (85%), Positives = 32/34 (94%) Frame = +2 Query: 86 FEKIKVANPIVEMDGDEMTRVFWQSIKDKLIFPF 187 F+KIKVANPIVEMDGDEMTR+ W+ IKDKLIFPF Sbjct: 24 FQKIKVANPIVEMDGDEMTRIIWKYIKDKLIFPF 57
>IDHC_TOBAC (P50218) Isocitrate dehydrogenase [NADP] (EC 1.1.1.42)| (Oxalosuccinate decarboxylase) (IDH) (NADP(+)-specific ICDH) (IDP) Length = 415 Score = 63.5 bits (153), Expect = 1e-10 Identities = 29/34 (85%), Positives = 31/34 (91%) Frame = +2 Query: 86 FEKIKVANPIVEMDGDEMTRVFWQSIKDKLIFPF 187 F+KIKV NPIVEMDGDEMTRV W+SIKDKLI PF Sbjct: 3 FDKIKVENPIVEMDGDEMTRVIWKSIKDKLICPF 36
>IDHC_SOLTU (P50217) Isocitrate dehydrogenase [NADP] (EC 1.1.1.42)| (Oxalosuccinate decarboxylase) (IDH) (NADP(+)-specific ICDH) (IDP) Length = 416 Score = 62.0 bits (149), Expect = 4e-10 Identities = 28/34 (82%), Positives = 30/34 (88%) Frame = +2 Query: 86 FEKIKVANPIVEMDGDEMTRVFWQSIKDKLIFPF 187 F+KI V NPIVEMDGDEMTRV W+SIKDKLI PF Sbjct: 3 FQKITVQNPIVEMDGDEMTRVIWKSIKDKLILPF 36
>IDH1_CANTR (O13285) Isocitrate dehydrogenase [NADP], mitochondrial precursor| (EC 1.1.1.42) (Oxalosuccinate decarboxylase) (IDH) (NADP(+)-specific ICDH) (IDP) (CtIDP1) Length = 430 Score = 57.8 bits (138), Expect = 8e-09 Identities = 24/33 (72%), Positives = 29/33 (87%) Frame = +2 Query: 89 EKIKVANPIVEMDGDEMTRVFWQSIKDKLIFPF 187 +KIKV NPIVE+DGDEMTR+ WQ IKD+LI P+ Sbjct: 28 DKIKVKNPIVELDGDEMTRIIWQKIKDQLILPY 60
>IDH2_CANTR (O13294) Isocitrate dehydrogenase [NADP] peroxisomal (EC 1.1.1.42)| (Oxalosuccinate decarboxylase) (IDH) (PS-NADP-IDH) (CtIDP2) Length = 410 Score = 57.4 bits (137), Expect = 1e-08 Identities = 25/33 (75%), Positives = 28/33 (84%) Frame = +2 Query: 89 EKIKVANPIVEMDGDEMTRVFWQSIKDKLIFPF 187 +KI V NPIVEMDGDEMTR+ WQ IKDKLI P+ Sbjct: 4 QKITVKNPIVEMDGDEMTRIIWQFIKDKLILPY 36
>IDHC_YEAST (P41939) Isocitrate dehydrogenase [NADP] cytoplasmic (EC 1.1.1.42)| (Oxalosuccinate decarboxylase) (IDH) (NADP(+)-specific ICDH) (IDP) Length = 412 Score = 55.5 bits (132), Expect = 4e-08 Identities = 23/32 (71%), Positives = 27/32 (84%) Frame = +2 Query: 92 KIKVANPIVEMDGDEMTRVFWQSIKDKLIFPF 187 KIKVANPIVEMDGDE TR+ W I+DKL+ P+ Sbjct: 3 KIKVANPIVEMDGDEQTRIIWHLIRDKLVLPY 34
>IDHP_ASPNG (P79089) Isocitrate dehydrogenase [NADP], mitochondrial precursor| (EC 1.1.1.42) (Oxalosuccinate decarboxylase) (IDH) (NADP(+)-specific ICDH) (IDP) Length = 498 Score = 55.5 bits (132), Expect = 4e-08 Identities = 22/32 (68%), Positives = 28/32 (87%) Frame = +2 Query: 92 KIKVANPIVEMDGDEMTRVFWQSIKDKLIFPF 187 KIKV NP+VE+DGDEMTR+ WQ I++KLI P+ Sbjct: 92 KIKVKNPVVELDGDEMTRIIWQEIREKLILPY 123
>IDHP_PIG (P33198) Isocitrate dehydrogenase [NADP], mitochondrial precursor| (EC 1.1.1.42) (Oxalosuccinate decarboxylase) (IDH) (NADP(+)-specific ICDH) (IDP) (ICD-M) (Fragment) Length = 421 Score = 55.1 bits (131), Expect = 5e-08 Identities = 23/32 (71%), Positives = 28/32 (87%) Frame = +2 Query: 89 EKIKVANPIVEMDGDEMTRVFWQSIKDKLIFP 184 ++IKVA P+VEMDGDEMTR+ WQ IK+KLI P Sbjct: 11 QRIKVAKPVVEMDGDEMTRIIWQFIKEKLILP 42
>IDHP_SCHPO (O14254) Probable isocitrate dehydrogenase [NADP], mitochondrial| precursor (EC 1.1.1.42) (Oxalosuccinate decarboxylase) (IDH) (NADP(+)-specific ICDH) (IDP) Length = 418 Score = 55.1 bits (131), Expect = 5e-08 Identities = 22/34 (64%), Positives = 29/34 (85%) Frame = +2 Query: 86 FEKIKVANPIVEMDGDEMTRVFWQSIKDKLIFPF 187 F+KI V NP+VEMDGDEMTRV W+ I++KL+ P+ Sbjct: 11 FQKITVKNPVVEMDGDEMTRVIWKIIREKLVLPY 44
>IDHP_HUMAN (P48735) Isocitrate dehydrogenase [NADP], mitochondrial precursor| (EC 1.1.1.42) (Oxalosuccinate decarboxylase) (IDH) (NADP(+)-specific ICDH) (IDP) (ICD-M) Length = 452 Score = 54.7 bits (130), Expect = 7e-08 Identities = 23/32 (71%), Positives = 28/32 (87%) Frame = +2 Query: 89 EKIKVANPIVEMDGDEMTRVFWQSIKDKLIFP 184 ++IKVA P+VEMDGDEMTR+ WQ IK+KLI P Sbjct: 42 KRIKVAKPVVEMDGDEMTRIIWQFIKEKLILP 73
>IDHP_BOVIN (Q04467) Isocitrate dehydrogenase [NADP], mitochondrial precursor| (EC 1.1.1.42) (Oxalosuccinate decarboxylase) (IDH) (NADP(+)-specific ICDH) (IDP) (ICD-M) Length = 452 Score = 54.7 bits (130), Expect = 7e-08 Identities = 23/32 (71%), Positives = 28/32 (87%) Frame = +2 Query: 89 EKIKVANPIVEMDGDEMTRVFWQSIKDKLIFP 184 ++IKVA P+VEMDGDEMTR+ WQ IK+KLI P Sbjct: 42 KRIKVAKPVVEMDGDEMTRIIWQFIKEKLILP 73
>IDHP_YEAST (P21954) Isocitrate dehydrogenase [NADP], mitochondrial precursor| (EC 1.1.1.42) (Oxalosuccinate decarboxylase) (IDH) (NADP(+)-specific ICDH) (IDP) Length = 428 Score = 53.5 bits (127), Expect = 1e-07 Identities = 22/34 (64%), Positives = 26/34 (76%) Frame = +2 Query: 86 FEKIKVANPIVEMDGDEMTRVFWQSIKDKLIFPF 187 F KIKV P+VE+DGDEMTR+ W IK KLI P+ Sbjct: 17 FSKIKVKQPVVELDGDEMTRIIWDKIKKKLILPY 50
>IDHP_MOUSE (P54071) Isocitrate dehydrogenase [NADP], mitochondrial precursor| (EC 1.1.1.42) (Oxalosuccinate decarboxylase) (IDH) (NADP(+)-specific ICDH) (IDP) (ICD-M) Length = 523 Score = 52.8 bits (125), Expect = 3e-07 Identities = 22/32 (68%), Positives = 27/32 (84%) Frame = +2 Query: 89 EKIKVANPIVEMDGDEMTRVFWQSIKDKLIFP 184 ++IKV P+VEMDGDEMTR+ WQ IK+KLI P Sbjct: 114 KRIKVEKPVVEMDGDEMTRIIWQFIKEKLILP 145
>IDHH_YEAST (P53982) Isocitrate dehydrogenase [NADP] (EC 1.1.1.42)| (Oxalosuccinate decarboxylase) (IDH) (NADP(+)-specific ICDH) (IDP) Length = 420 Score = 52.8 bits (125), Expect = 3e-07 Identities = 23/32 (71%), Positives = 27/32 (84%) Frame = +2 Query: 92 KIKVANPIVEMDGDEMTRVFWQSIKDKLIFPF 187 KIKV +PIVEMDGDE TRV W+ IK+KLI P+ Sbjct: 3 KIKVVHPIVEMDGDEQTRVIWKLIKEKLILPY 34
>IDH_MYCTU (P65097) Isocitrate dehydrogenase [NADP] (EC 1.1.1.42)| (Oxalosuccinate decarboxylase) (IDH) (NADP(+)-specific ICDH) (IDP) Length = 409 Score = 52.4 bits (124), Expect = 3e-07 Identities = 22/32 (68%), Positives = 27/32 (84%) Frame = +2 Query: 92 KIKVANPIVEMDGDEMTRVFWQSIKDKLIFPF 187 KIKV+ P+VE+DGDEMTRV W+ IKD LI P+ Sbjct: 6 KIKVSGPVVELDGDEMTRVIWKLIKDMLILPY 37
>IDH_MYCBO (P65098) Isocitrate dehydrogenase [NADP] (EC 1.1.1.42)| (Oxalosuccinate decarboxylase) (IDH) (NADP(+)-specific ICDH) (IDP) Length = 409 Score = 52.4 bits (124), Expect = 3e-07 Identities = 22/32 (68%), Positives = 27/32 (84%) Frame = +2 Query: 92 KIKVANPIVEMDGDEMTRVFWQSIKDKLIFPF 187 KIKV+ P+VE+DGDEMTRV W+ IKD LI P+ Sbjct: 6 KIKVSGPVVELDGDEMTRVIWKLIKDMLILPY 37
>IDH_SPHYA (P50215) Isocitrate dehydrogenase [NADP] (EC 1.1.1.42)| (Oxalosuccinate decarboxylase) (IDH) (NADP(+)-specific ICDH) (IDP) Length = 406 Score = 51.6 bits (122), Expect = 6e-07 Identities = 20/32 (62%), Positives = 28/32 (87%) Frame = +2 Query: 92 KIKVANPIVEMDGDEMTRVFWQSIKDKLIFPF 187 KIKV NP+VE+DGDEMTR+ W+ I+++LI P+ Sbjct: 3 KIKVKNPVVEIDGDEMTRIIWEWIRERLILPY 34
>IDHC_HUMAN (O75874) Isocitrate dehydrogenase [NADP] cytoplasmic (EC 1.1.1.42)| (Oxalosuccinate decarboxylase) (IDH) (NADP(+)-specific ICDH) (IDP) Length = 414 Score = 44.3 bits (103), Expect = 9e-05 Identities = 17/25 (68%), Positives = 22/25 (88%) Frame = +2 Query: 113 IVEMDGDEMTRVFWQSIKDKLIFPF 187 +VEM GDEMTR+ W+ IK+KLIFP+ Sbjct: 10 VVEMQGDEMTRIIWELIKEKLIFPY 34
>IDHC_RAT (P41562) Isocitrate dehydrogenase [NADP] cytoplasmic (EC 1.1.1.42)| (Oxalosuccinate decarboxylase) (IDH) (NADP(+)-specific ICDH) (IDP) Length = 414 Score = 42.0 bits (97), Expect = 4e-04 Identities = 16/25 (64%), Positives = 21/25 (84%) Frame = +2 Query: 113 IVEMDGDEMTRVFWQSIKDKLIFPF 187 +VEM GDEMTR+ W+ IK+KLI P+ Sbjct: 10 VVEMQGDEMTRIIWELIKEKLILPY 34
>IDHC_MOUSE (O88844) Isocitrate dehydrogenase [NADP] cytoplasmic (EC 1.1.1.42)| (Oxalosuccinate decarboxylase) (IDH) (NADP(+)-specific ICDH) (IDP) Length = 414 Score = 42.0 bits (97), Expect = 4e-04 Identities = 16/25 (64%), Positives = 21/25 (84%) Frame = +2 Query: 113 IVEMDGDEMTRVFWQSIKDKLIFPF 187 +VEM GDEMTR+ W+ IK+KLI P+ Sbjct: 10 VVEMQGDEMTRIIWELIKEKLILPY 34
>IDHC_MICOH (Q9Z2K8) Isocitrate dehydrogenase [NADP] cytoplasmic (EC 1.1.1.42)| (Oxalosuccinate decarboxylase) (IDH) (NADP(+)-specific ICDH) (IDP) Length = 414 Score = 42.0 bits (97), Expect = 4e-04 Identities = 16/25 (64%), Positives = 21/25 (84%) Frame = +2 Query: 113 IVEMDGDEMTRVFWQSIKDKLIFPF 187 +VEM GDEMTR+ W+ IK+KLI P+ Sbjct: 10 VVEMQGDEMTRIIWELIKEKLILPY 34
>IDHC_MICME (Q9Z2K9) Isocitrate dehydrogenase [NADP] cytoplasmic (EC 1.1.1.42)| (Oxalosuccinate decarboxylase) (IDH) (NADP(+)-specific ICDH) (IDP) Length = 414 Score = 42.0 bits (97), Expect = 4e-04 Identities = 16/25 (64%), Positives = 21/25 (84%) Frame = +2 Query: 113 IVEMDGDEMTRVFWQSIKDKLIFPF 187 +VEM GDEMTR+ W+ IK+KLI P+ Sbjct: 10 VVEMQGDEMTRIIWELIKEKLILPY 34
>IDHC_NAEFO (P83726) Isocitrate dehydrogenase [NADP] (EC 1.1.1.42)| (Oxalosuccinate decarboxylase) (IDH) (NADP(+)-specific ICDH) (IDP) (NF033) (Fragment) Length = 20 Score = 37.4 bits (85), Expect = 0.011 Identities = 15/18 (83%), Positives = 18/18 (100%) Frame = +2 Query: 86 FEKIKVANPIVEMDGDEM 139 F+KIKVANP+VE+DGDEM Sbjct: 3 FQKIKVANPVVELDGDEM 20
>CANA_DROME (Q11002) Calpain A (EC 3.4.22.-) (Calcium-activated neutral| proteinase A) (CANP A) [Contains: Calpain A catalytic subunit] Length = 828 Score = 30.0 bits (66), Expect = 1.8 Identities = 11/22 (50%), Positives = 16/22 (72%) Frame = -1 Query: 187 KWEDKLVLDRLPEYSGHLITVH 122 KW D ++ DRLP Y+G L+ +H Sbjct: 186 KWVDVIIDDRLPTYNGELMYMH 207
>CANB_DROME (Q9VT65) Calpain B (EC 3.4.22.-) (Calcium-activated neutral| proteinase B) (CANP B) [Contains: Calpain B catalytic subunit 1; Calpain B catalytic subunit 2] Length = 925 Score = 29.3 bits (64), Expect = 3.0 Identities = 11/22 (50%), Positives = 16/22 (72%) Frame = -1 Query: 187 KWEDKLVLDRLPEYSGHLITVH 122 KW + ++ DRLP Y+G LI +H Sbjct: 357 KWVEVVIDDRLPTYNGELIYMH 378
>ATZN_ECOLI (P37617) Lead, cadmium, zinc and mercury-transporting ATPase (EC| 3.6.3.3) (EC 3.6.3.5) Length = 732 Score = 28.1 bits (61), Expect = 6.7 Identities = 16/40 (40%), Positives = 21/40 (52%) Frame = -2 Query: 177 ISLSLIDCQNTLVISSPSISTMGLATLIFSNAMAVAAEAL 58 ++L LI C LVIS+P+ T GLA A+ AL Sbjct: 385 LTLLLIGCPCALVISTPAAITSGLAAAARRGALIKGGAAL 424 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 13,594,289 Number of Sequences: 219361 Number of extensions: 131380 Number of successful extensions: 491 Number of sequences better than 10.0: 27 Number of HSP's better than 10.0 without gapping: 491 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 491 length of database: 80,573,946 effective HSP length: 37 effective length of database: 72,457,589 effective search space used: 1738982136 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
