>YIF0_YEAST (P40186) Hypothetical 32.0 kDa protein in RPL34B-SYG1 intergenic|
           region
          Length = 285

 Score = 41.2 bits (95), Expect = 0.003
 Identities = 36/136 (26%), Positives = 62/136 (45%), Gaps = 6/136 (4%)
 Frame = +1

Query: 193 VRAFRGGATPTIPIVEFLERLQR----CNYLFDSXXXXXXXXXXXXFMRSP--AALEAGI 354
           + AF G   P I +V++LER+Q+     N +F S               S      +   
Sbjct: 147 ILAFYGKNVPEIAVVQYLERIQKYCPTTNDIFLSLLVYFDRISKNYGHSSERNGCAKQLF 206

Query: 355 VVEPATAHRLVSVAVLIGAKFVSPRYFERRVESFQICSGQSIRSSEMCPLELLFLRALNY 534
           V++    HRL+   V I  KF+S  ++      +    G S++  E+  LEL FL   ++
Sbjct: 207 VMDSGNIHRLLITGVTICTKFLSDFFYSN--SRYAKVGGISLQ--ELNHLELQFLILCDF 262

Query: 535 RLFIADEEFQRFFRIL 582
           +L ++ EE Q++  +L
Sbjct: 263 KLLVSVEEMQKYANLL 278

>YEO9_YEAST (P40038) Hypothetical 47.0 kDa protein in PET117-CEM1 intergenic|
           region
          Length = 420

 Score = 34.3 bits (77), Expect = 0.36
 Identities = 22/78 (28%), Positives = 39/78 (50%)
 Frame = +1

Query: 355 VVEPATAHRLVSVAVLIGAKFVSPRYFERRVESFQICSGQSIRSSEMCPLELLFLRALNY 534
           V++    HRL+   + +  KF+S  ++      +    G S++  E+  LEL FL   ++
Sbjct: 331 VMDSHNIHRLIIAGITVSTKFLSDFFYSN--SRYSRVGGISLQ--ELNHLELQFLVLCDF 386

Query: 535 RLFIADEEFQRFFRILER 588
            L I+  E QR+  +L R
Sbjct: 387 ELLISVNELQRYADLLYR 404

>PO2F1_MOUSE (P25425) POU domain, class 2, transcription factor 1|
           (Octamer-binding transcription factor 1) (Oct-1) (OTF-1)
           (NF-A1)
          Length = 770

 Score = 29.6 bits (65), Expect = 9.0
 Identities = 15/55 (27%), Positives = 25/55 (45%)
 Frame = -1

Query: 248 SRNSTMGMVGVAPPRNARTRSFSAGWEAAEEAKRRDSASTSDAKRRSVLGFPLPS 84
           S N+T  ++  APP ++   S S     +  A   +++S S+         PLPS
Sbjct: 529 SNNNTATVISTAPPASSAVTSPSLSPSPSASASTSEASSASETNTTQTTSTPLPS 583


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 62,137,538
Number of Sequences: 219361
Number of extensions: 929623
Number of successful extensions: 3667
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3589
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3664
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6769072002
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)