ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal9n23 |
|---|---|
| Clone Library Name | barley_pub |
>RPE_SOLTU (Q43843) Ribulose-phosphate 3-epimerase, chloroplast precursor (EC| 5.1.3.1) (Pentose-5-phosphate 3-epimerase) (PPE) (RPE) (R5P3E) (Fragment) Length = 280 Score = 78.6 bits (192), Expect = 6e-15 Identities = 39/40 (97%), Positives = 39/40 (97%) Frame = +1 Query: 4 PKNAYKVIEAGANALVAGSAVFGAKDYAEAIKGIKTSKRP 123 PKNAYKVIEAGANALVAGSAVFGA DYAEAIKGIKTSKRP Sbjct: 236 PKNAYKVIEAGANALVAGSAVFGAPDYAEAIKGIKTSKRP 275
>RPE_ORYSA (Q9ZTP5) Ribulose-phosphate 3-epimerase, chloroplast precursor (EC| 5.1.3.1) (Pentose-5-phosphate 3-epimerase) (PPE) (RPE) (R5P3E) Length = 274 Score = 77.8 bits (190), Expect = 1e-14 Identities = 38/40 (95%), Positives = 39/40 (97%) Frame = +1 Query: 4 PKNAYKVIEAGANALVAGSAVFGAKDYAEAIKGIKTSKRP 123 PKNAYKVIEAGANA+VAGSAVFGA DYAEAIKGIKTSKRP Sbjct: 230 PKNAYKVIEAGANAIVAGSAVFGAPDYAEAIKGIKTSKRP 269
>RPE_SPIOL (Q43157) Ribulose-phosphate 3-epimerase, chloroplast precursor (EC| 5.1.3.1) (Pentose-5-phosphate 3-epimerase) (PPE) (RPE) (R5P3E) Length = 285 Score = 77.0 bits (188), Expect = 2e-14 Identities = 38/41 (92%), Positives = 39/41 (95%) Frame = +1 Query: 1 SPKNAYKVIEAGANALVAGSAVFGAKDYAEAIKGIKTSKRP 123 +P NAYKVIEAGANALVAGSAVFGAKDYAEAIKGIK SKRP Sbjct: 240 TPANAYKVIEAGANALVAGSAVFGAKDYAEAIKGIKASKRP 280
>RPE_SYNY3 (P74061) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) Length = 229 Score = 60.1 bits (144), Expect = 2e-09 Identities = 27/40 (67%), Positives = 34/40 (85%) Frame = +1 Query: 4 PKNAYKVIEAGANALVAGSAVFGAKDYAEAIKGIKTSKRP 123 P N ++V+EAGANA+VAGSAVF A +YAEAI G++ SKRP Sbjct: 183 PNNTWQVLEAGANAIVAGSAVFNAPNYAEAIAGVRNSKRP 222
>RPE_BACSU (O34557) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) Length = 217 Score = 40.4 bits (93), Expect = 0.002 Identities = 21/32 (65%), Positives = 24/32 (75%) Frame = +1 Query: 22 VIEAGANALVAGSAVFGAKDYAEAIKGIKTSK 117 VIEAGAN LVAGSAV+G D +AI I+ SK Sbjct: 186 VIEAGANLLVAGSAVYGQSDRKKAISEIRGSK 217
>RPE_STRCO (Q9L0Z5) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) Length = 228 Score = 37.7 bits (86), Expect = 0.012 Identities = 16/28 (57%), Positives = 23/28 (82%) Frame = +1 Query: 28 EAGANALVAGSAVFGAKDYAEAIKGIKT 111 +AGA+ VAGSAV+GA D AEA++ ++T Sbjct: 186 DAGADVFVAGSAVYGASDPAEAVRALRT 213
>RPE_HAEIN (P44756) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) Length = 224 Score = 35.4 bits (80), Expect = 0.062 Identities = 16/34 (47%), Positives = 22/34 (64%) Frame = +1 Query: 10 NAYKVIEAGANALVAGSAVFGAKDYAEAIKGIKT 111 N ++ AGA+ VAGSA+FG DY + I I+T Sbjct: 184 NIAEIAAAGADMFVAGSAIFGKPDYKQVIDQIRT 217
>RPE_HELPJ (Q9ZJ75) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) Length = 217 Score = 34.7 bits (78), Expect = 0.11 Identities = 14/39 (35%), Positives = 28/39 (71%) Frame = +1 Query: 7 KNAYKVIEAGANALVAGSAVFGAKDYAEAIKGIKTSKRP 123 KN +++ +AG + +V+GS +F +KD AI+G++ ++P Sbjct: 177 KNIFELQQAGVDVVVSGSYIFESKDRKLAIEGLQNVRQP 215
>RPE_SCHPO (O14105) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (RPE) Length = 228 Score = 33.9 bits (76), Expect = 0.18 Identities = 17/38 (44%), Positives = 23/38 (60%) Frame = +1 Query: 1 SPKNAYKVIEAGANALVAGSAVFGAKDYAEAIKGIKTS 114 S K +AGAN +VAG+AVF A+ E I G++ S Sbjct: 179 SLKTVDAAADAGANVIVAGTAVFHAQSPEEVISGLRNS 216
>RPE1_ORYSA (Q9SE42) Ribulose-phosphate 3-epimerase, cytoplasmic isoform (EC| 5.1.3.1) (Ribulose-5-phosphate-epimerase) (Cyt-RPEase) (RPEcyt) (Pentose-5-phosphate 3-epimerase) (PPE) Length = 228 Score = 33.1 bits (74), Expect = 0.31 Identities = 14/28 (50%), Positives = 20/28 (71%) Frame = +1 Query: 31 AGANALVAGSAVFGAKDYAEAIKGIKTS 114 AGAN +VAGS++FGA + E I ++ S Sbjct: 193 AGANCIVAGSSIFGAAEPGEVISALRKS 220
>RPE_AQUAE (O67098) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) Length = 222 Score = 33.1 bits (74), Expect = 0.31 Identities = 14/34 (41%), Positives = 22/34 (64%) Frame = +1 Query: 10 NAYKVIEAGANALVAGSAVFGAKDYAEAIKGIKT 111 N +V+ AGA+ +V GS +FGAKD + +K+ Sbjct: 181 NIAEVVRAGADVVVVGSGIFGAKDIEAQTRKLKS 214
>RPEP_RALEU (Q04539) Ribulose-phosphate 3-epimerase, plasmid (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) Length = 241 Score = 32.7 bits (73), Expect = 0.40 Identities = 16/32 (50%), Positives = 20/32 (62%) Frame = +1 Query: 10 NAYKVIEAGANALVAGSAVFGAKDYAEAIKGI 105 N ++ AGA+ VAGSAVFGA D +GI Sbjct: 199 NITEIARAGADTFVAGSAVFGAPDADGGYRGI 230
>RPE_HELPY (P56188) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) Length = 217 Score = 32.0 bits (71), Expect = 0.68 Identities = 13/38 (34%), Positives = 27/38 (71%) Frame = +1 Query: 7 KNAYKVIEAGANALVAGSAVFGAKDYAEAIKGIKTSKR 120 KN +++ +AG + +V+GS +F +KD AI+G++ ++ Sbjct: 177 KNIFELQQAGVDVVVSGSYIFKSKDRKLAIEGLQNVRQ 214
>FAEHP_ARCFU (O28964) Fae/hps bifunctional enzyme [Includes:| Formaldehyde-activating enzyme (EC 4.3.-.-) (Fae); 3-hexulose-6-phosphate synthase (EC 4.1.2.-) (HPS) (D-arabino-3-hexulose-6-phosphate formaldehyde lyase)] Length = 394 Score = 32.0 bits (71), Expect = 0.68 Identities = 15/40 (37%), Positives = 24/40 (60%) Frame = +1 Query: 4 PKNAYKVIEAGANALVAGSAVFGAKDYAEAIKGIKTSKRP 123 P+N +VI AGA+ +V G AV A+D A++ + +P Sbjct: 344 PENVEEVIAAGADIIVVGRAVTKARDVEGAVRKFMSHMKP 383
>RPE_METJA (Q58093) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) Length = 234 Score = 32.0 bits (71), Expect = 0.68 Identities = 13/28 (46%), Positives = 20/28 (71%) Frame = +1 Query: 25 IEAGANALVAGSAVFGAKDYAEAIKGIK 108 ++AGA+ LVA SA+FG D A+K ++ Sbjct: 184 VKAGADVLVAASAIFGKDDVKTAVKNLR 211
>RPE_MYCTU (P65760) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) Length = 229 Score = 31.6 bits (70), Expect = 0.89 Identities = 14/27 (51%), Positives = 19/27 (70%) Frame = +1 Query: 28 EAGANALVAGSAVFGAKDYAEAIKGIK 108 EAG + VAGSAV+GA D A A+ ++ Sbjct: 191 EAGVDCFVAGSAVYGADDPAAAVAALR 217
>RPE_MYCBO (P65761) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) Length = 229 Score = 31.6 bits (70), Expect = 0.89 Identities = 14/27 (51%), Positives = 19/27 (70%) Frame = +1 Query: 28 EAGANALVAGSAVFGAKDYAEAIKGIK 108 EAG + VAGSAV+GA D A A+ ++ Sbjct: 191 EAGVDCFVAGSAVYGADDPAAAVAALR 217
>THIG_BACLD (Q65L94) Thiazole biosynthesis protein thiG| Length = 255 Score = 31.6 bits (70), Expect = 0.89 Identities = 15/36 (41%), Positives = 23/36 (63%) Frame = +1 Query: 1 SPKNAYKVIEAGANALVAGSAVFGAKDYAEAIKGIK 108 SPK+A +E GA+ ++ +AV GAKD + K +K Sbjct: 187 SPKDAAYAMELGADGVLLNTAVSGAKDPVQMAKAMK 222
>RPE_ASHGO (Q755M2) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (RPE) Length = 239 Score = 30.8 bits (68), Expect = 1.5 Identities = 14/31 (45%), Positives = 21/31 (67%) Frame = +1 Query: 28 EAGANALVAGSAVFGAKDYAEAIKGIKTSKR 120 +AGAN +VAG++VF A D + I +K + R Sbjct: 196 KAGANVIVAGTSVFAAADQKDVISYMKDNVR 226
>RPE_BUCAP (Q8K940) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) Length = 228 Score = 30.8 bits (68), Expect = 1.5 Identities = 15/34 (44%), Positives = 20/34 (58%) Frame = +1 Query: 7 KNAYKVIEAGANALVAGSAVFGAKDYAEAIKGIK 108 +N +V +GAN V GS +FG DY IK I+ Sbjct: 183 ENISEVAFSGANVFVIGSGIFGYTDYNVIIKKIR 216
>THIE_XYLFA (Q9PGC4) Thiamine-phosphate pyrophosphorylase (EC 2.5.1.3) (TMP| pyrophosphorylase) (TMP-PPase) (Thiamine-phosphate synthase) Length = 234 Score = 30.8 bits (68), Expect = 1.5 Identities = 14/37 (37%), Positives = 22/37 (59%) Frame = +1 Query: 1 SPKNAYKVIEAGANALVAGSAVFGAKDYAEAIKGIKT 111 +PKN +IEAGA L S ++ AK+ A+K ++ Sbjct: 194 TPKNIAPIIEAGAELLAVISGIYSAKNPVTALKAYQS 230
>THIE_XYLFT (Q87AX6) Thiamine-phosphate pyrophosphorylase (EC 2.5.1.3) (TMP| pyrophosphorylase) (TMP-PPase) (Thiamine-phosphate synthase) Length = 234 Score = 30.4 bits (67), Expect = 2.0 Identities = 14/37 (37%), Positives = 22/37 (59%) Frame = +1 Query: 1 SPKNAYKVIEAGANALVAGSAVFGAKDYAEAIKGIKT 111 +PKN +IEAGA L S ++ AK+ A+K ++ Sbjct: 194 TPKNIAPIIEAGAELLAVISGIYSAKNPITALKAYQS 230
>RPE_SERMA (P45455) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) Length = 210 Score = 30.4 bits (67), Expect = 2.0 Identities = 13/25 (52%), Positives = 17/25 (68%) Frame = +1 Query: 10 NAYKVIEAGANALVAGSAVFGAKDY 84 N ++ AGA+ VAGSA+FG DY Sbjct: 184 NIAEIAAAGADMFVAGSAIFGQPDY 208
>RPE_MYCLE (Q9CCP9) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) Length = 224 Score = 30.4 bits (67), Expect = 2.0 Identities = 13/27 (48%), Positives = 19/27 (70%) Frame = +1 Query: 28 EAGANALVAGSAVFGAKDYAEAIKGIK 108 EAG + VAGSAV+GA D + A+ ++ Sbjct: 186 EAGVDCFVAGSAVYGAADPSAAVAALR 212
>HPS_METAM (Q48907) 3-hexulose-6-phosphate synthase (EC 4.1.2.-) (HPS)| (D-arabino-3-hexulose-6-phosphate formaldehyde lyase) Length = 208 Score = 30.4 bits (67), Expect = 2.0 Identities = 14/30 (46%), Positives = 20/30 (66%) Frame = +1 Query: 4 PKNAYKVIEAGANALVAGSAVFGAKDYAEA 93 P +V +AGA +VAG+A++GA D A A Sbjct: 170 PATVAQVKDAGATIIVAGAAIYGAADPAAA 199
>TRPA_AERPE (Q9Y8T3) Tryptophan synthase alpha chain (EC 4.2.1.20)| Length = 252 Score = 30.0 bits (66), Expect = 2.6 Identities = 13/22 (59%), Positives = 19/22 (86%) Frame = +1 Query: 1 SPKNAYKVIEAGANALVAGSAV 66 SP++A +V+EAGA+A+V GS V Sbjct: 203 SPEDALRVLEAGADAVVVGSEV 224
>PCRB_METKA (Q8TXM0) Protein pcrB homolog| Length = 239 Score = 30.0 bits (66), Expect = 2.6 Identities = 17/37 (45%), Positives = 25/37 (67%), Gaps = 1/37 (2%) Frame = +1 Query: 1 SPKNAYKVIEAGANALVAGSAVFGAKDY-AEAIKGIK 108 SP+ A ++ EAGA+A+V G+AV D AE ++ IK Sbjct: 201 SPETARELAEAGADAIVTGTAVERDPDLAAEIVEAIK 237
>RPEC_RALEU (P40117) Ribulose-phosphate 3-epimerase, chromosomal (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) Length = 241 Score = 30.0 bits (66), Expect = 2.6 Identities = 14/24 (58%), Positives = 16/24 (66%) Frame = +1 Query: 10 NAYKVIEAGANALVAGSAVFGAKD 81 N + AGA+ VAGSAVFGA D Sbjct: 199 NIAAIARAGADTFVAGSAVFGAPD 222
>RPE_CANGA (Q6FL81) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (RPE) Length = 246 Score = 30.0 bits (66), Expect = 2.6 Identities = 15/31 (48%), Positives = 20/31 (64%) Frame = +1 Query: 28 EAGANALVAGSAVFGAKDYAEAIKGIKTSKR 120 +AGAN +VAG++VF A D E I +K R Sbjct: 201 KAGANVIVAGTSVFTASDPHEVISFMKEEVR 231
>HPS_MYCGS (Q9LBW4) 3-hexulose-6-phosphate synthase (EC 4.1.2.-) (HPS)| (D-arabino-3-hexulose-6-phosphate formaldehyde lyase) Length = 207 Score = 29.6 bits (65), Expect = 3.4 Identities = 14/31 (45%), Positives = 20/31 (64%) Frame = +1 Query: 22 VIEAGANALVAGSAVFGAKDYAEAIKGIKTS 114 V +AGA VAG A++GA D A A K ++ + Sbjct: 175 VQKAGAEVAVAGGAIYGAADPAAAAKELRAA 205
>RPE_PONPY (Q5R5Y2) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Ribulose-5-phosphate-3-epimerase) Length = 228 Score = 29.6 bits (65), Expect = 3.4 Identities = 12/26 (46%), Positives = 18/26 (69%) Frame = +1 Query: 4 PKNAYKVIEAGANALVAGSAVFGAKD 81 P +K EAGAN +V+GSA+ ++D Sbjct: 180 PDTVHKCAEAGANMIVSGSAIMRSED 205
>RPE_HUMAN (Q96AT9) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Ribulose-5-phosphate-3-epimerase) Length = 228 Score = 29.6 bits (65), Expect = 3.4 Identities = 12/26 (46%), Positives = 18/26 (69%) Frame = +1 Query: 4 PKNAYKVIEAGANALVAGSAVFGAKD 81 P +K EAGAN +V+GSA+ ++D Sbjct: 180 PDTVHKCAEAGANMIVSGSAIMRSED 205
>RPE_YEAST (P46969) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (RPE) Length = 238 Score = 29.3 bits (64), Expect = 4.4 Identities = 14/30 (46%), Positives = 20/30 (66%) Frame = +1 Query: 19 KVIEAGANALVAGSAVFGAKDYAEAIKGIK 108 K +AGAN +VAG++VF A D + I +K Sbjct: 195 KAAKAGANVIVAGTSVFTAADPHDVISFMK 224
>RPE_SHIFL (P0AG10) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) Length = 225 Score = 29.3 bits (64), Expect = 4.4 Identities = 13/34 (38%), Positives = 21/34 (61%) Frame = +1 Query: 10 NAYKVIEAGANALVAGSAVFGAKDYAEAIKGIKT 111 N ++ AGA+ VAGSA+F DY + I +++ Sbjct: 184 NIGEIAAAGADMFVAGSAIFDQPDYKKVIDEMRS 217
>RPE_ECOLI (P0AG07) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) Length = 225 Score = 29.3 bits (64), Expect = 4.4 Identities = 13/34 (38%), Positives = 21/34 (61%) Frame = +1 Query: 10 NAYKVIEAGANALVAGSAVFGAKDYAEAIKGIKT 111 N ++ AGA+ VAGSA+F DY + I +++ Sbjct: 184 NIGEIAAAGADMFVAGSAIFDQPDYKKVIDEMRS 217
>RPE_ECOL6 (P0AG08) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) Length = 225 Score = 29.3 bits (64), Expect = 4.4 Identities = 13/34 (38%), Positives = 21/34 (61%) Frame = +1 Query: 10 NAYKVIEAGANALVAGSAVFGAKDYAEAIKGIKT 111 N ++ AGA+ VAGSA+F DY + I +++ Sbjct: 184 NIGEIAAAGADMFVAGSAIFDQPDYKKVIDEMRS 217
>RPE_ECO57 (P0AG09) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) Length = 225 Score = 29.3 bits (64), Expect = 4.4 Identities = 13/34 (38%), Positives = 21/34 (61%) Frame = +1 Query: 10 NAYKVIEAGANALVAGSAVFGAKDYAEAIKGIKT 111 N ++ AGA+ VAGSA+F DY + I +++ Sbjct: 184 NIGEIAAAGADMFVAGSAIFDQPDYKKVIDEMRS 217
>NANE_MYCPU (Q98QJ8) Putative N-acetylmannosamine-6-phosphate 2-epimerase (EC| 5.1.3.9) (ManNAc-6-P epimerase) Length = 228 Score = 29.3 bits (64), Expect = 4.4 Identities = 12/22 (54%), Positives = 17/22 (77%) Frame = +1 Query: 1 SPKNAYKVIEAGANALVAGSAV 66 SP+NA ++ GANA+V GSA+ Sbjct: 191 SPQNAKDALDIGANAVVVGSAI 212
>YPI1_VIBAL (P52055) Hypothetical UPF0001 protein in pilT-proC intergenic| region (ORF1) Length = 233 Score = 28.5 bits (62), Expect = 7.6 Identities = 11/21 (52%), Positives = 17/21 (80%) Frame = +1 Query: 25 IEAGANALVAGSAVFGAKDYA 87 IEAG+ + G+A+FGA+DY+ Sbjct: 213 IEAGSTMVRIGTAIFGARDYS 233
>CYA1_DROME (P32870) Ca(2+)/calmodulin-responsive adenylate cyclase (EC 4.6.1.1)| (ATP pyrophosphate-lyase) (Protein rutabaga) Length = 2248 Score = 28.1 bits (61), Expect = 9.9 Identities = 11/23 (47%), Positives = 13/23 (56%) Frame = +1 Query: 229 SLSSHTLYHRDHHHQIGNKRQQR 297 S H YH HHHQ ++QQR Sbjct: 1946 SQQRHQRYHHHHHHQQRQQQQQR 1968
>ATKA_MYCTU (P65209) Potassium-transporting ATPase A chain (EC 3.6.3.12)| (Potassium-translocating ATPase A chain) (ATP phosphohydrolase [potassium-transporting] A chain) (Potassium-binding and translocating subunit A) Length = 571 Score = 28.1 bits (61), Expect = 9.9 Identities = 16/47 (34%), Positives = 22/47 (46%) Frame = -3 Query: 158 AYTPVLHAATATGLLLVLIPLIASA*SLAPKTAEPATRAFAPASMTL 18 +Y + A G ++IP++A A SLA K P T A P L Sbjct: 492 SYDTTIGVAMLIGRFFLIIPVLAIAGSLARKGTTPVTAATFPTHKPL 538
>ATKA_MYCBO (P65210) Potassium-transporting ATPase A chain (EC 3.6.3.12)| (Potassium-translocating ATPase A chain) (ATP phosphohydrolase [potassium-transporting] A chain) (Potassium-binding and translocating subunit A) Length = 571 Score = 28.1 bits (61), Expect = 9.9 Identities = 16/47 (34%), Positives = 22/47 (46%) Frame = -3 Query: 158 AYTPVLHAATATGLLLVLIPLIASA*SLAPKTAEPATRAFAPASMTL 18 +Y + A G ++IP++A A SLA K P T A P L Sbjct: 492 SYDTTIGVAMLIGRFFLIIPVLAIAGSLARKGTTPVTAATFPTHKPL 538
>SLIT1_HUMAN (O75093) Slit homolog 1 protein precursor (Slit-1) (Multiple| epidermal growth factor-like domains 4) Length = 1534 Score = 28.1 bits (61), Expect = 9.9 Identities = 13/25 (52%), Positives = 16/25 (64%) Frame = +2 Query: 167 LCNISSFLFYHCRGLRCIGAFHCQA 241 LCN + L CRGL+C+ HCQA Sbjct: 1411 LCNQAGALAEPCRGLQCLHG-HCQA 1434
>THIG_STAES (Q8CN30) Thiazole biosynthesis protein thiG| Length = 255 Score = 28.1 bits (61), Expect = 9.9 Identities = 15/36 (41%), Positives = 23/36 (63%), Gaps = 3/36 (8%) Frame = +1 Query: 1 SPKNAYKVIEAGANALVAGSAVFGAKD---YAEAIK 99 SPK+A +E GA+ ++ +A+ AKD AEA+K Sbjct: 187 SPKDACHAMELGADGILLNTAISAAKDPVKMAEAMK 222
>THIG_STAEQ (Q5HLB4) Thiazole biosynthesis protein thiG| Length = 255 Score = 28.1 bits (61), Expect = 9.9 Identities = 15/36 (41%), Positives = 23/36 (63%), Gaps = 3/36 (8%) Frame = +1 Query: 1 SPKNAYKVIEAGANALVAGSAVFGAKD---YAEAIK 99 SPK+A +E GA+ ++ +A+ AKD AEA+K Sbjct: 187 SPKDACHAMELGADGILLNTAISAAKDPVKMAEAMK 222 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 55,854,040 Number of Sequences: 219361 Number of extensions: 962811 Number of successful extensions: 2552 Number of sequences better than 10.0: 45 Number of HSP's better than 10.0 without gapping: 2502 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2548 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2570413340 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
