ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal9n02
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_470395.1| Oryza sativa (japonica cultivar-group), mRNA 519 e-144
2ref|XM_470394.1| Oryza sativa (japonica cultivar-group), mRNA 519 e-144
3dbj|AK100284.1| Oryza sativa (japonica cultivar-group) cDNA clon... 519 e-144
4gb|AY106668.1| Zea mays PCO087459 mRNA sequence 387 e-104
5gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 153 7e-34
6gb|AC092852.6| Oryza sativa chromosome 3 BAC OSJNBa0032G11 genom... 153 7e-34
7dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 153 7e-34
8emb|BX897696.12| Zebrafish DNA sequence from clone DKEY-111B14 i... 44 0.49
9gb|AF241734.2| Homo sapiens chromosome X clone RP1-34M10 map p11... 42 1.9
10gb|AC108881.3| Homo sapiens chromosome X clone RP11-21D3 map p11... 42 1.9
11gb|CP000115.1| Nitrobacter winogradskyi Nb-255, complete genome 42 1.9
12emb|AL157830.10| Human DNA sequence from clone RP11-332M12 on ch... 42 1.9
13gb|AC175363.2| Pan troglodytes chromosome X clone CH251-7A1 map ... 42 1.9
14emb|CR352324.11| Zebrafish DNA sequence from clone CH211-218L14 ... 42 1.9
15emb|BX572076.4| Zebrafish DNA sequence from clone DKEY-69N5 in l... 42 1.9
16emb|AL670662.7| Human DNA sequence from clone XXbac-93B10 on chr... 42 1.9
17gb|AC101689.12| Mus musculus chromosome 1, clone RP23-217C21, co... 40 7.7
18gb|AC161042.4| Mus musculus chromosome 8, clone RP24-278L20, com... 40 7.7
19ref|XM_748267.1| Aspergillus fumigatus Af293 hypothetical protei... 40 7.7
20gb|AC102783.10| Mus musculus chromosome 14, clone RP23-390K3, co... 40 7.7
21emb|AL356252.10| Human DNA sequence from clone RP11-468L10 on ch... 40 7.7
22emb|Y15839.1|CHY15839 Cochliobolus heterostrophus pkc1, fat1 genes 40 7.7
23gb|AC023296.6| Homo sapiens chromosome 8, clone RP11-564K14, com... 40 7.7
24emb|CR859591.1| Pongo pygmaeus mRNA; cDNA DKFZp468N195 (from clo... 40 7.7
25gb|AC069222.23| Homo sapiens 3 BAC RP11-383I23 (Roswell Park Can... 40 7.7
26gb|AC102433.8| Mus musculus chromosome 8, clone RP24-119F15, com... 40 7.7
27gb|AC154685.2| Mus musculus BAC clone RP24-321G16 from chromosom... 40 7.7
28gb|AC135324.4| Homo sapiens chromosome 8, clone RP11-42L22, comp... 40 7.7
29gb|AF132039.1|AF132039 Mus musculus BAC 118I7 chromosome 6 Gpr37... 40 7.7
30gb|AE017194.1| Bacillus cereus ATCC 10987, complete genome 40 7.7
31gb|AC165153.2| Mus musculus BAC clone RP23-359L1 from chromosome... 40 7.7
32gb|AC153888.3| Mus musculus 6 BAC RP23-428L22 (Roswell Park Canc... 40 7.7 
>ref|XM_470395.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1659

 Score =  519 bits (262), Expect = e-144
 Identities = 431/487 (88%), Gaps = 2/487 (0%)
 Strand = Plus / Plus

                                                                       
Query: 20  caactccatgcagggcttcgtgcccaaccctctcctcagccccgcgcattggtgtaaaga 79
           ||||||| | |||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 391 caactccctccagggcttcgtgcccaaccctctccttagccccgcgcattggtgtaaaga 450

                                                                       
Query: 80  tcctaaaaggcccattcaagatgttacaaaggacctagtaggttcctctgtttctgtcaa 139
            || |||||||||||||||||||||||||||||||| || ||||| ||  ||||||||||
Sbjct: 451 ccccaaaaggcccattcaagatgttacaaaggaccttgtgggttcttccatttctgtcaa 510

                                                                       
Query: 140 ggtcgttgaagcgaatgaggcagnnnnnnngcttgtcttctctgagaaggatgccagttg 199
           ||| || |||| ||| |||| ||       |||||||||||| ||||||||||| |||||
Sbjct: 511 ggtggtcgaagtgaacgaggaagaaaggaagcttgtcttctcagagaaggatgcaagttg 570

                                                                       
Query: 200 gt-cattgtactcttctcaagtaaagattggtggtatctatgatggaattgttggttcag 258
           || || |  | ||||||| ||| |||||||||| |||||||||||||||||| |||||||
Sbjct: 571 gttcactc-attcttctctagtcaagattggtgctatctatgatggaattgtcggttcag 629

                                                                       
Query: 259 tgttccactatggtgcatttgttcacctgcaatttcctgatggaaattatcatctcactg 318
           | |||||||| |||||||||||||| |||| |||||||||||||||||||||||| ||||
Sbjct: 630 ttttccactacggtgcatttgttcatctgcgatttcctgatggaaattatcatcttactg 689

                                                                       
Query: 319 gtctcgtacatatctctgaggtctcttgggatcttgtccaagatgtccaagattttctaa 378
           | || |||||||||||||||||||||||||||||||||||||||||||  |||||| |||
Sbjct: 690 gccttgtacatatctctgaggtctcttgggatcttgtccaagatgtccgggattttttaa 749

                                                                       
Query: 379 ccgaaggtgataccgtcaaggtcatagtggtgaatgttgatgcggagaaatcaaggatag 438
             ||||||||||| ||||||||||||||||||||  |||||  |||||| ||||||||||
Sbjct: 750 atgaaggtgatactgtcaaggtcatagtggtgaacattgatatggagaagtcaaggatag 809

                                                                       
Query: 439 gtttgtcaatcaggcaattggaggaagatcctctgctggagacattggacaaaattattc 498
            ||| |||||||| |||||||||||||||||||| |||||||||||||||||| ||||||
Sbjct: 810 ctttatcaatcagacaattggaggaagatcctctactggagacattggacaaagttattc 869

                  
Query: 499 ctttgga 505
           |||||||
Sbjct: 870 ctttgga 876
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>ref|XM_470394.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1472

 Score =  519 bits (262), Expect = e-144
 Identities = 431/487 (88%), Gaps = 2/487 (0%)
 Strand = Plus / Plus

                                                                       
Query: 20  caactccatgcagggcttcgtgcccaaccctctcctcagccccgcgcattggtgtaaaga 79
           ||||||| | |||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 330 caactccctccagggcttcgtgcccaaccctctccttagccccgcgcattggtgtaaaga 389

                                                                       
Query: 80  tcctaaaaggcccattcaagatgttacaaaggacctagtaggttcctctgtttctgtcaa 139
            || |||||||||||||||||||||||||||||||| || ||||| ||  ||||||||||
Sbjct: 390 ccccaaaaggcccattcaagatgttacaaaggaccttgtgggttcttccatttctgtcaa 449

                                                                       
Query: 140 ggtcgttgaagcgaatgaggcagnnnnnnngcttgtcttctctgagaaggatgccagttg 199
           ||| || |||| ||| |||| ||       |||||||||||| ||||||||||| |||||
Sbjct: 450 ggtggtcgaagtgaacgaggaagaaaggaagcttgtcttctcagagaaggatgcaagttg 509

                                                                       
Query: 200 gt-cattgtactcttctcaagtaaagattggtggtatctatgatggaattgttggttcag 258
           || || |  | ||||||| ||| |||||||||| |||||||||||||||||| |||||||
Sbjct: 510 gttcactc-attcttctctagtcaagattggtgctatctatgatggaattgtcggttcag 568

                                                                       
Query: 259 tgttccactatggtgcatttgttcacctgcaatttcctgatggaaattatcatctcactg 318
           | |||||||| |||||||||||||| |||| |||||||||||||||||||||||| ||||
Sbjct: 569 ttttccactacggtgcatttgttcatctgcgatttcctgatggaaattatcatcttactg 628

                                                                       
Query: 319 gtctcgtacatatctctgaggtctcttgggatcttgtccaagatgtccaagattttctaa 378
           | || |||||||||||||||||||||||||||||||||||||||||||  |||||| |||
Sbjct: 629 gccttgtacatatctctgaggtctcttgggatcttgtccaagatgtccgggattttttaa 688

                                                                       
Query: 379 ccgaaggtgataccgtcaaggtcatagtggtgaatgttgatgcggagaaatcaaggatag 438
             ||||||||||| ||||||||||||||||||||  |||||  |||||| ||||||||||
Sbjct: 689 atgaaggtgatactgtcaaggtcatagtggtgaacattgatatggagaagtcaaggatag 748

                                                                       
Query: 439 gtttgtcaatcaggcaattggaggaagatcctctgctggagacattggacaaaattattc 498
            ||| |||||||| |||||||||||||||||||| |||||||||||||||||| ||||||
Sbjct: 749 ctttatcaatcagacaattggaggaagatcctctactggagacattggacaaagttattc 808

                  
Query: 499 ctttgga 505
           |||||||
Sbjct: 809 ctttgga 815
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>dbj|AK100284.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023075D13, full
           insert sequence
          Length = 1659

 Score =  519 bits (262), Expect = e-144
 Identities = 431/487 (88%), Gaps = 2/487 (0%)
 Strand = Plus / Plus

                                                                       
Query: 20  caactccatgcagggcttcgtgcccaaccctctcctcagccccgcgcattggtgtaaaga 79
           ||||||| | |||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 391 caactccctccagggcttcgtgcccaaccctctccttagccccgcgcattggtgtaaaga 450

                                                                       
Query: 80  tcctaaaaggcccattcaagatgttacaaaggacctagtaggttcctctgtttctgtcaa 139
            || |||||||||||||||||||||||||||||||| || ||||| ||  ||||||||||
Sbjct: 451 ccccaaaaggcccattcaagatgttacaaaggaccttgtgggttcttccatttctgtcaa 510

                                                                       
Query: 140 ggtcgttgaagcgaatgaggcagnnnnnnngcttgtcttctctgagaaggatgccagttg 199
           ||| || |||| ||| |||| ||       |||||||||||| ||||||||||| |||||
Sbjct: 511 ggtggtcgaagtgaacgaggaagaaaggaagcttgtcttctcagagaaggatgcaagttg 570

                                                                       
Query: 200 gt-cattgtactcttctcaagtaaagattggtggtatctatgatggaattgttggttcag 258
           || || |  | ||||||| ||| |||||||||| |||||||||||||||||| |||||||
Sbjct: 571 gttcactc-attcttctctagtcaagattggtgctatctatgatggaattgtcggttcag 629

                                                                       
Query: 259 tgttccactatggtgcatttgttcacctgcaatttcctgatggaaattatcatctcactg 318
           | |||||||| |||||||||||||| |||| |||||||||||||||||||||||| ||||
Sbjct: 630 ttttccactacggtgcatttgttcatctgcgatttcctgatggaaattatcatcttactg 689

                                                                       
Query: 319 gtctcgtacatatctctgaggtctcttgggatcttgtccaagatgtccaagattttctaa 378
           | || |||||||||||||||||||||||||||||||||||||||||||  |||||| |||
Sbjct: 690 gccttgtacatatctctgaggtctcttgggatcttgtccaagatgtccgggattttttaa 749

                                                                       
Query: 379 ccgaaggtgataccgtcaaggtcatagtggtgaatgttgatgcggagaaatcaaggatag 438
             ||||||||||| ||||||||||||||||||||  |||||  |||||| ||||||||||
Sbjct: 750 atgaaggtgatactgtcaaggtcatagtggtgaacattgatatggagaagtcaaggatag 809

                                                                       
Query: 439 gtttgtcaatcaggcaattggaggaagatcctctgctggagacattggacaaaattattc 498
            ||| |||||||| |||||||||||||||||||| |||||||||||||||||| ||||||
Sbjct: 810 ctttatcaatcagacaattggaggaagatcctctactggagacattggacaaagttattc 869

                  
Query: 499 ctttgga 505
           |||||||
Sbjct: 870 ctttgga 876
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>gb|AY106668.1| Zea mays PCO087459 mRNA sequence
          Length = 814

 Score =  387 bits (195), Expect = e-104
 Identities = 410/484 (84%)
 Strand = Plus / Plus

                                                                       
Query: 38  cgtgcccaaccctctcctcagccccgcgcattggtgtaaagatcctaaaaggcccattca 97
           |||||||||||||||||||||||||||||| ||||||||||| || ||||||||||| ||
Sbjct: 1   cgtgcccaaccctctcctcagccccgcgcactggtgtaaagaccccaaaaggcccatcca 60

                                                                       
Query: 98  agatgttacaaaggacctagtaggttcctctgtttctgtcaaggtcgttgaagcgaatga 157
           ||||||||| || |||||||||||  | ||  ||||||||||||| | ||||| ||||||
Sbjct: 61  agatgttacgaaagacctagtaggaacgtccatttctgtcaaggtggctgaagtgaatga 120

                                                                       
Query: 158 ggcagnnnnnnngcttgtcttctctgagaaggatgccagttggtcattgtactcttctca 217
           ||  |        ||||||||||||||||||||||| |||||||||   |||||||| | 
Sbjct: 121 ggaggaaaagaaacttgtcttctctgagaaggatgctagttggtcaacatactcttcccg 180

                                                                       
Query: 218 agtaaagattggtggtatctatgatggaattgttggttcagtgttccactatggtgcatt 277
           | |||||||||| |  ||||||||||||||||| || |||||||||||||||||||||||
Sbjct: 181 aataaagattggcgacatctatgatggaattgtgggctcagtgttccactatggtgcatt 240

                                                                       
Query: 278 tgttcacctgcaatttcctgatggaaattatcatctcactggtctcgtacatatctctga 337
           ||||||||||| |||||||||||||   |||||||| ||||| || ||||||||||| ||
Sbjct: 241 tgttcacctgcgatttcctgatggattatatcatcttactggccttgtacatatctcgga 300

                                                                       
Query: 338 ggtctcttgggatcttgtccaagatgtccaagattttctaaccgaaggtgataccgtcaa 397
           ||| |||||||||||||||||||| ||| | |||||||||| |||||| ||| | |||||
Sbjct: 301 ggtgtcttgggatcttgtccaagacgtcaaggattttctaaacgaaggggatgctgtcaa 360

                                                                       
Query: 398 ggtcatagtggtgaatgttgatgcggagaaatcaaggataggtttgtcaatcaggcaatt 457
           ||||||||| |||||  |||||  |  ||| |||||||||| ||| || ||||| ||| |
Sbjct: 361 ggtcatagttgtgaacattgatatgacgaagtcaaggatagctttatctatcagacaact 420

                                                                       
Query: 458 ggaggaagatcctctgctggagacattggacaaaattattcctttggaacccgatctatc 517
           ||||||||||||| |  |||| |||||||||||| |||| ||||||||| | |||| |||
Sbjct: 421 ggaggaagatcctttattggaaacattggacaaagttatccctttggaagctgatcaatc 480

               
Query: 518 acct 521
           ||||
Sbjct: 481 acct 484
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  153 bits (77), Expect = 7e-34
 Identities = 104/113 (92%)
 Strand = Plus / Minus

                                                                            
Query: 300      ggaaattatcatctcactggtctcgtacatatctctgaggtctcttgggatcttgtccaa 359
                |||||||||||||| ||||| || ||||||||||||||||||||||||||||||||||||
Sbjct: 35218670 ggaaattatcatcttactggccttgtacatatctctgaggtctcttgggatcttgtccaa 35218611

                                                                     
Query: 360      gatgtccaagattttctaaccgaaggtgataccgtcaaggtcatagtggtgaa 412
                |||||||  |||||| |||  ||||||||||| ||||||||||||||||||||
Sbjct: 35218610 gatgtccgggattttttaaatgaaggtgatactgtcaaggtcatagtggtgaa 35218558



 Score =  129 bits (65), Expect = 1e-26
 Identities = 118/133 (88%), Gaps = 2/133 (1%)
 Strand = Plus / Minus

                                                                            
Query: 170      gcttgtcttctctgagaaggatgccagttggt-cattgtactcttctcaagtaaagattg 228
                |||||||||||| ||||||||||| ||||||| || |  | ||||||| ||| |||||||
Sbjct: 35218879 gcttgtcttctcagagaaggatgcaagttggttcactc-attcttctctagtcaagattg 35218821

                                                                            
Query: 229      gtggtatctatgatggaattgttggttcagtgttccactatggtgcatttgttcacctgc 288
                ||| |||||||||||||||||| |||||||| |||||||| |||||||||||||| ||||
Sbjct: 35218820 gtgctatctatgatggaattgtcggttcagttttccactacggtgcatttgttcatctgc 35218761

                             
Query: 289      aatttcctgatgg 301
                 ||||||||||||
Sbjct: 35218760 gatttcctgatgg 35218748



 Score =  117 bits (59), Expect = 4e-23
 Identities = 77/83 (92%)
 Strand = Plus / Minus

                                                                            
Query: 422      ggagaaatcaaggataggtttgtcaatcaggcaattggaggaagatcctctgctggagac 481
                |||||| |||||||||| ||| |||||||| |||||||||||||||||||| ||||||||
Sbjct: 35218092 ggagaagtcaaggatagctttatcaatcagacaattggaggaagatcctctactggagac 35218033

                                       
Query: 482      attggacaaaattattcctttgg 504
                |||||||||| ||||||||||||
Sbjct: 35218032 attggacaaagttattcctttgg 35218010



 Score = 93.7 bits (47), Expect = 6e-16
 Identities = 56/59 (94%)
 Strand = Plus / Minus

                                                                           
Query: 20       caactccatgcagggcttcgtgcccaaccctctcctcagccccgcgcattggtgtaaag 78
                ||||||| | |||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 35219534 caactccctccagggcttcgtgcccaaccctctccttagccccgcgcattggtgtaaag 35219476



 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 54/59 (91%)
 Strand = Plus / Minus

                                                                           
Query: 84       aaaaggcccattcaagatgttacaaaggacctagtaggttcctctgtttctgtcaaggt 142
                |||||||||||||||||||||||||||||||| || ||||| ||  |||||||||||||
Sbjct: 35219319 aaaaggcccattcaagatgttacaaaggaccttgtgggttcttccatttctgtcaaggt 35219261
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>gb|AC092852.6| Oryza sativa chromosome 3 BAC OSJNBa0032G11 genomic sequence, complete
             sequence
          Length = 156606

 Score =  153 bits (77), Expect = 7e-34
 Identities = 104/113 (92%)
 Strand = Plus / Minus

                                                                         
Query: 300   ggaaattatcatctcactggtctcgtacatatctctgaggtctcttgggatcttgtccaa 359
             |||||||||||||| ||||| || ||||||||||||||||||||||||||||||||||||
Sbjct: 97431 ggaaattatcatcttactggccttgtacatatctctgaggtctcttgggatcttgtccaa 97372

                                                                  
Query: 360   gatgtccaagattttctaaccgaaggtgataccgtcaaggtcatagtggtgaa 412
             |||||||  |||||| |||  ||||||||||| ||||||||||||||||||||
Sbjct: 97371 gatgtccgggattttttaaatgaaggtgatactgtcaaggtcatagtggtgaa 97319



 Score =  129 bits (65), Expect = 1e-26
 Identities = 118/133 (88%), Gaps = 2/133 (1%)
 Strand = Plus / Minus

                                                                         
Query: 170   gcttgtcttctctgagaaggatgccagttggt-cattgtactcttctcaagtaaagattg 228
             |||||||||||| ||||||||||| ||||||| || |  | ||||||| ||| |||||||
Sbjct: 97640 gcttgtcttctcagagaaggatgcaagttggttcactc-attcttctctagtcaagattg 97582

                                                                         
Query: 229   gtggtatctatgatggaattgttggttcagtgttccactatggtgcatttgttcacctgc 288
             ||| |||||||||||||||||| |||||||| |||||||| |||||||||||||| ||||
Sbjct: 97581 gtgctatctatgatggaattgtcggttcagttttccactacggtgcatttgttcatctgc 97522

                          
Query: 289   aatttcctgatgg 301
              ||||||||||||
Sbjct: 97521 gatttcctgatgg 97509



 Score =  117 bits (59), Expect = 4e-23
 Identities = 77/83 (92%)
 Strand = Plus / Minus

                                                                         
Query: 422   ggagaaatcaaggataggtttgtcaatcaggcaattggaggaagatcctctgctggagac 481
             |||||| |||||||||| ||| |||||||| |||||||||||||||||||| ||||||||
Sbjct: 96853 ggagaagtcaaggatagctttatcaatcagacaattggaggaagatcctctactggagac 96794

                                    
Query: 482   attggacaaaattattcctttgg 504
             |||||||||| ||||||||||||
Sbjct: 96793 attggacaaagttattcctttgg 96771



 Score = 93.7 bits (47), Expect = 6e-16
 Identities = 56/59 (94%)
 Strand = Plus / Minus

                                                                        
Query: 20    caactccatgcagggcttcgtgcccaaccctctcctcagccccgcgcattggtgtaaag 78
             ||||||| | |||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 98295 caactccctccagggcttcgtgcccaaccctctccttagccccgcgcattggtgtaaag 98237



 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 54/59 (91%)
 Strand = Plus / Minus

                                                                        
Query: 84    aaaaggcccattcaagatgttacaaaggacctagtaggttcctctgtttctgtcaaggt 142
             |||||||||||||||||||||||||||||||| || ||||| ||  |||||||||||||
Sbjct: 98080 aaaaggcccattcaagatgttacaaaggaccttgtgggttcttccatttctgtcaaggt 98022
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  153 bits (77), Expect = 7e-34
 Identities = 104/113 (92%)
 Strand = Plus / Minus

                                                                            
Query: 300      ggaaattatcatctcactggtctcgtacatatctctgaggtctcttgggatcttgtccaa 359
                |||||||||||||| ||||| || ||||||||||||||||||||||||||||||||||||
Sbjct: 35308742 ggaaattatcatcttactggccttgtacatatctctgaggtctcttgggatcttgtccaa 35308683

                                                                     
Query: 360      gatgtccaagattttctaaccgaaggtgataccgtcaaggtcatagtggtgaa 412
                |||||||  |||||| |||  ||||||||||| ||||||||||||||||||||
Sbjct: 35308682 gatgtccgggattttttaaatgaaggtgatactgtcaaggtcatagtggtgaa 35308630



 Score =  129 bits (65), Expect = 1e-26
 Identities = 118/133 (88%), Gaps = 2/133 (1%)
 Strand = Plus / Minus

                                                                            
Query: 170      gcttgtcttctctgagaaggatgccagttggt-cattgtactcttctcaagtaaagattg 228
                |||||||||||| ||||||||||| ||||||| || |  | ||||||| ||| |||||||
Sbjct: 35308951 gcttgtcttctcagagaaggatgcaagttggttcactc-attcttctctagtcaagattg 35308893

                                                                            
Query: 229      gtggtatctatgatggaattgttggttcagtgttccactatggtgcatttgttcacctgc 288
                ||| |||||||||||||||||| |||||||| |||||||| |||||||||||||| ||||
Sbjct: 35308892 gtgctatctatgatggaattgtcggttcagttttccactacggtgcatttgttcatctgc 35308833

                             
Query: 289      aatttcctgatgg 301
                 ||||||||||||
Sbjct: 35308832 gatttcctgatgg 35308820



 Score =  117 bits (59), Expect = 4e-23
 Identities = 77/83 (92%)
 Strand = Plus / Minus

                                                                            
Query: 422      ggagaaatcaaggataggtttgtcaatcaggcaattggaggaagatcctctgctggagac 481
                |||||| |||||||||| ||| |||||||| |||||||||||||||||||| ||||||||
Sbjct: 35308164 ggagaagtcaaggatagctttatcaatcagacaattggaggaagatcctctactggagac 35308105

                                       
Query: 482      attggacaaaattattcctttgg 504
                |||||||||| ||||||||||||
Sbjct: 35308104 attggacaaagttattcctttgg 35308082



 Score = 93.7 bits (47), Expect = 6e-16
 Identities = 56/59 (94%)
 Strand = Plus / Minus

                                                                           
Query: 20       caactccatgcagggcttcgtgcccaaccctctcctcagccccgcgcattggtgtaaag 78
                ||||||| | |||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 35309606 caactccctccagggcttcgtgcccaaccctctccttagccccgcgcattggtgtaaag 35309548



 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 54/59 (91%)
 Strand = Plus / Minus

                                                                           
Query: 84       aaaaggcccattcaagatgttacaaaggacctagtaggttcctctgtttctgtcaaggt 142
                |||||||||||||||||||||||||||||||| || ||||| ||  |||||||||||||
Sbjct: 35309391 aaaaggcccattcaagatgttacaaaggaccttgtgggttcttccatttctgtcaaggt 35309333
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>emb|BX897696.12| Zebrafish DNA sequence from clone DKEY-111B14 in linkage group 20,
              complete sequence
          Length = 175787

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 94     ttcaagatgttacaaaggacct 115
              ||||||||||||||||||||||
Sbjct: 129532 ttcaagatgttacaaaggacct 129553
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>gb|AF241734.2| Homo sapiens chromosome X clone RP1-34M10 map p11.4, complete
            sequence
          Length = 119916

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 437  aggtttgtcaatcaggcaatt 457
            |||||||||||||||||||||
Sbjct: 2335 aggtttgtcaatcaggcaatt 2315
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>gb|AC108881.3| Homo sapiens chromosome X clone RP11-21D3 map p11.4, complete sequence
          Length = 163215

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 437   aggtttgtcaatcaggcaatt 457
             |||||||||||||||||||||
Sbjct: 86788 aggtttgtcaatcaggcaatt 86768
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>gb|CP000115.1| Nitrobacter winogradskyi Nb-255, complete genome
          Length = 3402093

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 513     ctatcacctgatgctgaggcc 533
               |||||||||||||||||||||
Sbjct: 1968266 ctatcacctgatgctgaggcc 1968246
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>emb|AL157830.10| Human DNA sequence from clone RP11-332M12 on chromosome 9p24.1-24.3,
             complete sequence
          Length = 168621

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 481   cattggacaaaattattcctt 501
             |||||||||||||||||||||
Sbjct: 64720 cattggacaaaattattcctt 64700
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>gb|AC175363.2| Pan troglodytes chromosome X clone CH251-7A1 map human ortholog p11.4,
             complete sequence
          Length = 221738

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 437   aggtttgtcaatcaggcaatt 457
             |||||||||||||||||||||
Sbjct: 44184 aggtttgtcaatcaggcaatt 44164
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>emb|CR352324.11| Zebrafish DNA sequence from clone CH211-218L14 in linkage group 12,
              complete sequence
          Length = 206894

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 466    atcctctgctggagacattgg 486
              |||||||||||||||||||||
Sbjct: 124844 atcctctgctggagacattgg 124864
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>emb|BX572076.4| Zebrafish DNA sequence from clone DKEY-69N5 in linkage group 12, complete
              sequence
          Length = 183510

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 466    atcctctgctggagacattgg 486
              |||||||||||||||||||||
Sbjct: 136722 atcctctgctggagacattgg 136742
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>emb|AL670662.7| Human DNA sequence from clone XXbac-93B10 on chromosome 6, complete
             sequence
          Length = 115723

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 437   aggtttgtcaatcaggcaatt 457
             |||||||||||||||||||||
Sbjct: 39296 aggtttgtcaatcaggcaatt 39276
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>gb|AC101689.12| Mus musculus chromosome 1, clone RP23-217C21, complete sequence
          Length = 189241

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 118   taggttcctctgtttctgtc 137
             ||||||||||||||||||||
Sbjct: 92672 taggttcctctgtttctgtc 92691
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>gb|AC161042.4| Mus musculus chromosome 8, clone RP24-278L20, complete sequence
          Length = 174823

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 263    ccactatggtgcatttgttc 282
              ||||||||||||||||||||
Sbjct: 102890 ccactatggtgcatttgttc 102871
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>ref|XM_748267.1| Aspergillus fumigatus Af293 hypothetical protein (Afu5g12930) partial
            mRNA
          Length = 1995

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 532  ccgcgtcatctcctccagaa 551
            ||||||||||||||||||||
Sbjct: 1914 ccgcgtcatctcctccagaa 1895
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>gb|AC102783.10| Mus musculus chromosome 14, clone RP23-390K3, complete sequence
          Length = 199993

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 289    aatttcctgatggaaattat 308
              ||||||||||||||||||||
Sbjct: 136706 aatttcctgatggaaattat 136687
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>emb|AL356252.10| Human DNA sequence from clone RP11-468L10 on chromosome 13, complete
             sequence
          Length = 143690

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 480   acattggacaaaattattcctttg 503
             |||||| |||||||||||||||||
Sbjct: 43753 acattgtacaaaattattcctttg 43730
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>emb|Y15839.1|CHY15839 Cochliobolus heterostrophus pkc1, fat1 genes
          Length = 9313

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 398  ggtcatagtggtgaatgttgatgc 421
            ||||||||| ||||||||||||||
Sbjct: 7396 ggtcatagtagtgaatgttgatgc 7373
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>gb|AC023296.6| Homo sapiens chromosome 8, clone RP11-564K14, complete sequence
          Length = 189532

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 278    tgttcacctgcaatttcctgatgg 301
              ||||||| ||||||||||||||||
Sbjct: 141081 tgttcacttgcaatttcctgatgg 141058
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>emb|CR859591.1| Pongo pygmaeus mRNA; cDNA DKFZp468N195 (from clone DKFZp468N195)
          Length = 515

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 33  ggcttcgtgcccaaccctct 52
           ||||||||||||||||||||
Sbjct: 237 ggcttcgtgcccaaccctct 256
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>gb|AC069222.23| Homo sapiens 3 BAC RP11-383I23 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 117000

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 542   tcctccagaaattgaacttcttcc 565
             ||||||||||||| ||||||||||
Sbjct: 27222 tcctccagaaattaaacttcttcc 27245
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>gb|AC102433.8| Mus musculus chromosome 8, clone RP24-119F15, complete sequence
          Length = 157000

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 263   ccactatggtgcatttgttc 282
             ||||||||||||||||||||
Sbjct: 19462 ccactatggtgcatttgttc 19481
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>gb|AC154685.2| Mus musculus BAC clone RP24-321G16 from chromosome 17, complete
             sequence
          Length = 162362

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                             
Query: 426   aaatcaaggataggtttgtcaatcaggcaatt 457
             |||||||| || ||||||||||||||| ||||
Sbjct: 52950 aaatcaagtatgggtttgtcaatcaggaaatt 52981
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>gb|AC135324.4| Homo sapiens chromosome 8, clone RP11-42L22, complete sequence
          Length = 77514

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 278  tgttcacctgcaatttcctgatgg 301
            ||||||| ||||||||||||||||
Sbjct: 9159 tgttcacttgcaatttcctgatgg 9136
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>gb|AF132039.1|AF132039 Mus musculus BAC 118I7 chromosome 6 Gpr37 gene, complete sequence
          Length = 98491

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 116   agtaggttcctctgtttctg 135
             ||||||||||||||||||||
Sbjct: 55144 agtaggttcctctgtttctg 55125
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>gb|AE017194.1| Bacillus cereus ATCC 10987, complete genome
          Length = 5224283

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 408    gtgaatgttgatgcggagaa 427
              ||||||||||||||||||||
Sbjct: 772373 gtgaatgttgatgcggagaa 772392
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>gb|AC165153.2| Mus musculus BAC clone RP23-359L1 from chromosome 17, complete sequence
          Length = 219548

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                              
Query: 426    aaatcaaggataggtttgtcaatcaggcaatt 457
              |||||||| || ||||||||||||||| ||||
Sbjct: 189008 aaatcaagtatgggtttgtcaatcaggaaatt 189039
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>gb|AC153888.3| Mus musculus 6 BAC RP23-428L22 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse6 BAC Library) complete sequence
          Length = 178961

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 116   agtaggttcctctgtttctg 135
             ||||||||||||||||||||
Sbjct: 77948 agtaggttcctctgtttctg 77967


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,019,036
Number of Sequences: 3902068
Number of extensions: 5019036
Number of successful extensions: 91348
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 91223
Number of HSP's gapped (non-prelim): 120
length of query: 567
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 544
effective length of database: 17,143,297,704
effective search space: 9325953950976
effective search space used: 9325953950976
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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