>BPT1_YEAST (P14772) Bile pigment transporter 1|
          Length = 1559

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 9/29 (31%), Positives = 19/29 (65%)
 Frame = -1

Query: 88   RRSLQQPHLRHYISRSIHEKPQGRSCQSE 2
            +R+++Q HL+ ++ + +H KP+G     E
Sbjct: 1409 KRAVEQAHLKPHLEKMLHSKPRGDDSNEE 1437

>YAE9_YEAST (P39721) Protein YAL049C|
          Length = 246

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 13/36 (36%), Positives = 19/36 (52%)
 Frame = +1

Query: 16  IFPGVSHGWTVRYNGEDAAAVKSAEEALTDMXDWFN 123
           +F GV+HG+  R +    A   + E+ L D   WFN
Sbjct: 206 LFSGVAHGFAARGDISIPAVKYAKEKVLLDQIYWFN 241

>2NPD_NEUCR (Q01284) 2-nitropropane dioxygenase precursor (EC 1.13.11.32)|
           (Nitroalkane oxidase) (2-NPD)
          Length = 378

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 13/43 (30%), Positives = 21/43 (48%)
 Frame = +1

Query: 46  VRYNGEDAAAVKSAEEALTDMXDWFNKNLK*T*ISGPPFVITN 174
           + + G  +   +SA+ ALT +  WF        IS P ++I N
Sbjct: 1   MHFPGHSSKKEESAQAALTKLNSWFPTTKNPVIISAPMYLIAN 43

>PRM2_PONPY (P35301) Protamine-2 (Protamine-P2) (Sperm histone P2)|
          Length = 102

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 14/27 (51%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
 Frame = -3

Query: 320 SRPRNEQSHTNQH-ACDRQRRMSYRHR 243
           SR R  + H  QH +C R+RR S RHR
Sbjct: 59  SRRRLHRIHRQQHRSCKRRRRHSCRHR 85

>PRM2_MOUSE (P07978) Protamine-2 (Protamine-P2) (Sperm histone P2) [Contains:|
           PP2-A; PP2-C; PP2-D; PP2-B (Protamine MP2)]
          Length = 107

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = -3

Query: 320 SRPRNEQSHTNQHACDRQRRMSYRHR 243
           SR R  + H  + +C R+RR S RHR
Sbjct: 56  SRKRLHRIHKRRRSCRRRRRHSCRHR 81

>ORC1_MOUSE (Q9Z1N2) Origin recognition complex subunit 1|
          Length = 840

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 19/66 (28%), Positives = 28/66 (42%), Gaps = 2/66 (3%)
 Frame = +2

Query: 116 GLTRTSSEPEXXXXXXXXXISLCHSSRVITRASGVYVM--VFALADAYRTCVFVCRRRAG 289
           GLTR S +P          +S   + R     +   V   V AL+   R C+ +CRR   
Sbjct: 651 GLTRMSFQPYSHSQLKQILVSRLRNLRAFEDDAIQLVARKVAALSGDARRCLDICRRATE 710

Query: 290 WCVIAH 307
            C ++H
Sbjct: 711 ICELSH 716


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 51,357,116
Number of Sequences: 219361
Number of extensions: 914840
Number of successful extensions: 2190
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2150
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2190
length of database: 80,573,946
effective HSP length: 100
effective length of database: 58,637,846
effective search space used: 1407308304
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)