Clone Information

BLAST Search Result

Clone Name	baal9l20
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	RCAA_HORVU (Q40073) Ribulose bisphosphate carboxylase/oxygenase ...	422	e-118
2	RCAB_HORVU (Q42450) Ribulose bisphosphate carboxylase/oxygenase ...	394	e-109
3	RCA_ORYSA (P93431) Ribulose bisphosphate carboxylase/oxygenase a...	389	e-108
4	RCA2_LARTR (Q7X999) Ribulose bisphosphate carboxylase/oxygenase ...	383	e-106
5	RCA_LYCPN (O49074) Ribulose bisphosphate carboxylase/oxygenase a...	382	e-106
6	RCA2_TOBAC (Q40565) Ribulose bisphosphate carboxylase/oxygenase ...	379	e-105
7	RCA1_LARTR (Q7X9A0) Ribulose bisphosphate carboxylase/oxygenase ...	378	e-105
8	RCA_MALDO (Q40281) Ribulose bisphosphate carboxylase/oxygenase a...	376	e-104
9	RCA_MAIZE (Q9ZT00) Ribulose bisphosphate carboxylase/oxygenase a...	376	e-104
10	RCA1_TOBAC (Q40460) Ribulose bisphosphate carboxylase/oxygenase ...	374	e-103
11	RCA_ARATH (P10896) Ribulose bisphosphate carboxylase/oxygenase a...	367	e-101
12	RCA_PHAAU (O98997) Ribulose bisphosphate carboxylase/oxygenase a...	363	e-100
13	RCA_SPIOL (P10871) Ribulose bisphosphate carboxylase/oxygenase a...	363	e-100
14	RCA_PHAVU (O64981) Ribulose bisphosphate carboxylase/oxygenase a...	353	2e-97
15	RCA_CUCSA (Q01587) Ribulose bisphosphate carboxylase/oxygenase a...	340	2e-93
16	RCA_CHLRE (P23489) Ribulose bisphosphate carboxylase/oxygenase a...	298	1e-80
17	RCA_ANASC (Q06721) Ribulose bisphosphate carboxylase/oxygenase a...	244	2e-64
18	RCA_ANASP (P58555) Ribulose bisphosphate carboxylase/oxygenase a...	239	5e-63
19	RCA_POPEU (P84562) Ribulose bisphosphate carboxylase/oxygenase a...	47	5e-05
20	SYL_PSESM (Q87VX3) Leucyl-tRNA synthetase (EC 6.1.1.4) (Leucine-...	32	2.1
21	MAGL2_HUMAN (Q9UJ55) MAGE-like protein 2 (Necdin-like protein 1)...	31	2.7
22	FILA_HUMAN (P20930) Filaggrin	31	3.6
23	EPHB6_PANTR (P0C0K6) Ephrin type-B receptor 6 precursor (Tyrosin...	31	3.6
24	EPHB6_HUMAN (O15197) Ephrin type-B receptor 6 precursor (Tyrosin...	31	3.6
25	EPHB6_RAT (P0C0K7) Ephrin type-B receptor 6 precursor (Tyrosine-...	30	4.6
26	EPHB6_MOUSE (O08644) Ephrin type-B receptor 6 precursor (Tyrosin...	30	4.6
27	DTD_BURPS (Q63QX1) D-tyrosyl-tRNA(Tyr) deacylase (EC 3.1.-.-)	30	4.6
28	DTD_BURMA (Q62HB3) D-tyrosyl-tRNA(Tyr) deacylase (EC 3.1.-.-)	30	4.6
29	YNEI_ECOLI (P76149) Aldehyde dehydrogenase-like protein yneI (EC...	30	4.6
30	LEPA_HELPY (O25122) GTP-binding protein lepA	30	4.6
31	GP116_HUMAN (Q8IZF2) Probable G-protein coupled receptor 116 pre...	30	6.1
32	PNPT1_MOUSE (Q8K1R3) Polyribonucleotide nucleotidyltransferase 1...	30	6.1
33	RL3_RHOPA (P60456) 50S ribosomal protein L3 (RRP-L3)	30	7.9
34	LRC24_MOUSE (Q8BHA1) Leucine-rich repeat-containing protein 24 p...	30	7.9
35	PNPT1_PONPY (Q5RCW2) Polyribonucleotide nucleotidyltransferase 1...	30	7.9
36	PNPT1_HUMAN (Q8TCS8) Polyribonucleotide nucleotidyltransferase 1...	30	7.9
37	PRS4_RAT (P62193) 26S protease regulatory subunit 4 (P26s4) (Pro...	30	7.9
38	PRS4_MOUSE (P62192) 26S protease regulatory subunit 4 (P26s4) (P...	30	7.9
39	PRS4_HUMAN (P62191) 26S protease regulatory subunit 4 (P26s4) (P...	30	7.9
40	PRS4_CHICK (Q90732) 26S protease regulatory subunit 4 (P26s4) (P...	30	7.9

>RCAA_HORVU (Q40073) Ribulose bisphosphate carboxylase/oxygenase activase A,|
           chloroplast precursor (RuBisCO activase A) (RA A)
          Length = 464

 Score =  422 bits (1086), Expect = e-118
 Identities = 207/209 (99%), Positives = 207/209 (99%)
 Frame = +2

Query: 11  MCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIV 190
           MCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNK ENPRVPIV
Sbjct: 212 MCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKRENPRVPIV 271

Query: 191 VTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQS 370
           VTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQS
Sbjct: 272 VTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQS 331

Query: 371 IDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLV 550
           IDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLV
Sbjct: 332 IDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLV 391

Query: 551 QEQDNVKRVQLADTYMSXAALGDANQDAM 637
           QEQDNVKRVQLADTYMS AALGDANQDAM
Sbjct: 392 QEQDNVKRVQLADTYMSQAALGDANQDAM 420

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>RCAB_HORVU (Q42450) Ribulose bisphosphate carboxylase/oxygenase activase B,|
           chloroplast precursor (RuBisCO activase B) (RA B)
          Length = 425

 Score =  394 bits (1012), Expect = e-109
 Identities = 187/209 (89%), Positives = 200/209 (95%)
 Frame = +2

Query: 11  MCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIV 190
           MCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPI+
Sbjct: 209 MCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPII 268

Query: 191 VTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQS 370
           VTGNDFSTLYAPLIRDGRMEKFYWAPTR+DRIGVCKGIF+TDNV DE+VV++VDTFPGQS
Sbjct: 269 VTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRTDNVPDEAVVRLVDTFPGQS 328

Query: 371 IDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLV 550
           IDFFGALRARVYDDEVRKWVG  G+ENI KRLVNSR+GP TF+QPKMT+EKL+EYGHMLV
Sbjct: 329 IDFFGALRARVYDDEVRKWVGEIGVENISKRLVNSREGPPTFDQPKMTIEKLMEYGHMLV 388

Query: 551 QEQDNVKRVQLADTYMSXAALGDANQDAM 637
           QEQ+NVKRVQLAD Y+S AALG AN DAM
Sbjct: 389 QEQENVKRVQLADKYLSEAALGQANDDAM 417

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>RCA_ORYSA (P93431) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 432

 Score =  389 bits (1000), Expect = e-108
 Identities = 184/209 (88%), Positives = 199/209 (95%)
 Frame = +2

Query: 11  MCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIV 190
           MCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIAD PTNVQLPGMYNKE+NPRVPI+
Sbjct: 212 MCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEDNPRVPII 271

Query: 191 VTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQS 370
           VTGNDFSTLYAPLIRDGRMEKFYWAPTRDDR+GVCKGIF+TDNV DE +VKIVD+FPGQS
Sbjct: 272 VTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRVGVCKGIFRTDNVPDEDIVKIVDSFPGQS 331

Query: 371 IDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLV 550
           IDFFGALRARVYDDEVRKWV  TG+ENIGKRLVNSR+GP  FEQPKMT+EKL+EYG+MLV
Sbjct: 332 IDFFGALRARVYDDEVRKWVSDTGVENIGKRLVNSREGPPEFEQPKMTIEKLIEYGYMLV 391

Query: 551 QEQDNVKRVQLADTYMSXAALGDANQDAM 637
           +EQ+NVKRVQLA+ Y+S AALGDAN DAM
Sbjct: 392 KEQENVKRVQLAEQYLSEAALGDANSDAM 420

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>RCA2_LARTR (Q7X999) Ribulose bisphosphate carboxylase/oxygenase activase 2,|
           chloroplast precursor (RuBisCO activase 2) (RA 2)
           (RubisCO activase beta form)
          Length = 435

 Score =  383 bits (983), Expect = e-106
 Identities = 180/209 (86%), Positives = 198/209 (94%)
 Frame = +2

Query: 11  MCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIV 190
           MCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIAD PTNVQLPGMYNKEENPRVPI+
Sbjct: 222 MCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEENPRVPII 281

Query: 191 VTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQS 370
           VTGNDFSTLYAPLIRDGRMEKFYWAPTR+DRIGVCKGIF+TDNV +E +VK+VD FPGQS
Sbjct: 282 VTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRTDNVPEEDIVKVVDQFPGQS 341

Query: 371 IDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLV 550
           IDFFGALRARVYDDEVRKWV   G++ IGK+LVNS++GP TFEQPKMT++KLL+YG+MLV
Sbjct: 342 IDFFGALRARVYDDEVRKWVSEVGVDTIGKKLVNSKEGPPTFEQPKMTIDKLLQYGNMLV 401

Query: 551 QEQDNVKRVQLADTYMSXAALGDANQDAM 637
           +EQ+NVKRVQLAD YMS AALGDANQDA+
Sbjct: 402 EEQENVKRVQLADKYMSEAALGDANQDAI 430

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>RCA_LYCPN (O49074) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 459

 Score =  382 bits (980), Expect = e-106
 Identities = 183/210 (87%), Positives = 200/210 (95%)
 Frame = +2

Query: 8   SMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPI 187
           +MCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIAD PTNVQLPGMYNK+EN RVPI
Sbjct: 220 NMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKQENARVPI 279

Query: 188 VVTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQ 367
           +VTGNDFSTLYAPLIRDGRMEKFYWAPTR+DRIGVCKGIF+TDNV +E+VVKIVD+FPGQ
Sbjct: 280 IVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRTDNVPEEAVVKIVDSFPGQ 339

Query: 368 SIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHML 547
           SIDFFGALRARVYDDEVRKWV  TGIE IG++L+NSRDGP TFEQPKMT+EKLLEYG+ML
Sbjct: 340 SIDFFGALRARVYDDEVRKWVSGTGIELIGEKLLNSRDGPPTFEQPKMTLEKLLEYGNML 399

Query: 548 VQEQDNVKRVQLADTYMSXAALGDANQDAM 637
           VQEQ+NVKRVQLA+TY+  AALGDAN DA+
Sbjct: 400 VQEQENVKRVQLAETYLKEAALGDANADAI 429

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>RCA2_TOBAC (Q40565) Ribulose bisphosphate carboxylase/oxygenase activase 2,|
           chloroplast precursor (RuBisCO activase 2) (RA 2)
          Length = 439

 Score =  379 bits (973), Expect = e-105
 Identities = 182/210 (86%), Positives = 198/210 (94%)
 Frame = +2

Query: 8   SMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPI 187
           ++CCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIAD PTNVQLPGMYNK+EN RVPI
Sbjct: 225 NICCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKQENARVPI 284

Query: 188 VVTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQ 367
           +VTGNDFSTLYAPLIRDGRMEKFYWAPTR+DRIGVCKGIF+TDNV +E+V+KIVDTFPGQ
Sbjct: 285 IVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRTDNVPEEAVIKIVDTFPGQ 344

Query: 368 SIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHML 547
           SIDFFGALRARVYDDEVRKWV  TGIE IG +L+NS DGP TFEQPKMTVEKLLEYG+ML
Sbjct: 345 SIDFFGALRARVYDDEVRKWVSGTGIEAIGDKLLNSFDGPPTFEQPKMTVEKLLEYGNML 404

Query: 548 VQEQDNVKRVQLADTYMSXAALGDANQDAM 637
           VQEQ+NVKRVQLA+TY+  AALGDAN DA+
Sbjct: 405 VQEQENVKRVQLAETYLKEAALGDANADAI 434

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>RCA1_LARTR (Q7X9A0) Ribulose bisphosphate carboxylase/oxygenase activase 1,|
           chloroplast precursor (RuBisCO activase 1) (RA 1)
           (RubisCO activase alpha form)
          Length = 476

 Score =  378 bits (971), Expect = e-105
 Identities = 179/209 (85%), Positives = 196/209 (93%)
 Frame = +2

Query: 11  MCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIV 190
           MCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIAD PTNVQLPGMYNKEENPRVPI+
Sbjct: 222 MCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEENPRVPII 281

Query: 191 VTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQS 370
           VTGNDFSTLYAPLIRDGRMEKFYWAPTR+DRIGVCKGIF+TDNV+D+ +VK+VDTFPGQS
Sbjct: 282 VTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRTDNVADDDIVKLVDTFPGQS 341

Query: 371 IDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLV 550
           IDFFGALRARVY DEVRKWV   G++ IGK+LVNS++GP +FEQPKMT++KLL YG MLV
Sbjct: 342 IDFFGALRARVYHDEVRKWVSEVGVDTIGKKLVNSKEGPPSFEQPKMTIDKLLGYGGMLV 401

Query: 551 QEQDNVKRVQLADTYMSXAALGDANQDAM 637
           QEQ+NVKRVQLAD YMS AALGDAN DA+
Sbjct: 402 QEQENVKRVQLADKYMSEAALGDANNDAI 430

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>RCA_MALDO (Q40281) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 437

 Score =  376 bits (966), Expect = e-104
 Identities = 178/209 (85%), Positives = 197/209 (94%)
 Frame = +2

Query: 11  MCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIV 190
           MC LFINDLDAGAGR+GGTTQYTVNNQMVNATLMNIAD PTNVQLPGMYNKEENPRVPI+
Sbjct: 222 MCALFINDLDAGAGRLGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEENPRVPII 281

Query: 191 VTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQS 370
           VTGNDFSTLYAPLIRDGRMEKFYWAPTR+DRIGVC GIF++DNV+ E +VK+VDTFPGQS
Sbjct: 282 VTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCIGIFRSDNVAKEDIVKLVDTFPGQS 341

Query: 371 IDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLV 550
           IDFFGALRARVYDDEVRKW+   G+++IGK+LVNS++GP TFEQPKMT+EKLLEYG+MLV
Sbjct: 342 IDFFGALRARVYDDEVRKWITGVGVDSIGKKLVNSKEGPPTFEQPKMTIEKLLEYGNMLV 401

Query: 551 QEQDNVKRVQLADTYMSXAALGDANQDAM 637
           QEQ+NVKRVQLAD Y+S AALGDAN DAM
Sbjct: 402 QEQENVKRVQLADKYLSEAALGDANSDAM 430

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>RCA_MAIZE (Q9ZT00) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 433

 Score =  376 bits (965), Expect = e-104
 Identities = 177/209 (84%), Positives = 197/209 (94%)
 Frame = +2

Query: 11  MCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIV 190
           M CLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIAD PTNVQLPGMYNKE+NPRVPI+
Sbjct: 218 MSCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEDNPRVPII 277

Query: 191 VTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQS 370
           VTGNDFSTLYAPLIRDGRMEKFYWAPTR+DRIGVCKGIF+TD V +E VV++VDTFPGQS
Sbjct: 278 VTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRTDGVDEEHVVQLVDTFPGQS 337

Query: 371 IDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLV 550
           IDFFGALRARVYDDEVR+WV  TG+ENI ++LVNS++GP TFEQPK+T+EKLLEYGHMLV
Sbjct: 338 IDFFGALRARVYDDEVRRWVSETGVENIARKLVNSKEGPPTFEQPKITIEKLLEYGHMLV 397

Query: 551 QEQDNVKRVQLADTYMSXAALGDANQDAM 637
            EQ+NVKRVQLAD Y++ AALG+AN+DAM
Sbjct: 398 AEQENVKRVQLADKYLNEAALGEANEDAM 426

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>RCA1_TOBAC (Q40460) Ribulose bisphosphate carboxylase/oxygenase activase 1,|
           chloroplast precursor (RuBisCO activase 1) (RA 1)
          Length = 442

 Score =  374 bits (961), Expect = e-103
 Identities = 181/210 (86%), Positives = 193/210 (91%)
 Frame = +2

Query: 8   SMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPI 187
           +MCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIAD PTNVQLPGMYNK+EN RVPI
Sbjct: 225 NMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKQENARVPI 284

Query: 188 VVTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQ 367
           +VTGNDFSTLYAPLIRDGRMEKFYWAPTR+DRIGVC GIF+TDNV  E VVKIVD FPGQ
Sbjct: 285 IVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCTGIFRTDNVPAEDVVKIVDNFPGQ 344

Query: 368 SIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHML 547
           SIDFFGALRARVYDDEVRKWV  TGIE IG +L+NS DGP TFEQPKMT+EKLLEYG+ML
Sbjct: 345 SIDFFGALRARVYDDEVRKWVSGTGIEKIGDKLLNSFDGPPTFEQPKMTIEKLLEYGNML 404

Query: 548 VQEQDNVKRVQLADTYMSXAALGDANQDAM 637
           VQEQ+NVKRVQLAD Y+  AALGDAN DA+
Sbjct: 405 VQEQENVKRVQLADKYLKEAALGDANADAI 434

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>RCA_ARATH (P10896) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 474

 Score =  367 bits (943), Expect = e-101
 Identities = 176/209 (84%), Positives = 192/209 (91%)
 Frame = +2

Query: 11  MCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIV 190
           MCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIAD PTNVQLPGMYNKEEN RVPI+
Sbjct: 222 MCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEENARVPII 281

Query: 191 VTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQS 370
            TGNDFSTLYAPLIRDGRMEKFYWAPTR+DRIGVCKGIF+TD + DE +V +VD FPGQS
Sbjct: 282 CTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRTDKIKDEDIVTLVDQFPGQS 341

Query: 371 IDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLV 550
           IDFFGALRARVYDDEVRK+V S G+E IGKRLVNSR+GP  FEQP+MT EKL+EYG+MLV
Sbjct: 342 IDFFGALRARVYDDEVRKFVESLGVEKIGKRLVNSREGPPVFEQPEMTYEKLMEYGNMLV 401

Query: 551 QEQDNVKRVQLADTYMSXAALGDANQDAM 637
            EQ+NVKRVQLA+TY+S AALGDAN DA+
Sbjct: 402 MEQENVKRVQLAETYLSQAALGDANADAI 430

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>RCA_PHAAU (O98997) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 439

 Score =  363 bits (933), Expect = e-100
 Identities = 169/209 (80%), Positives = 194/209 (92%)
 Frame = +2

Query: 11  MCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIV 190
           MC LFINDLDAGAGR+GGTTQYTVNNQMVNATLMNIAD PTNVQLPGMYNKEEN RVPI+
Sbjct: 224 MCALFINDLDAGAGRLGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEENARVPII 283

Query: 191 VTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQS 370
           VTGNDFSTLYAPLIRDGRMEKFYWAPTRDDR+GVCKGIF+TD V +E + K+VDTFPGQS
Sbjct: 284 VTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRVGVCKGIFRTDGVPEEDITKLVDTFPGQS 343

Query: 371 IDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLV 550
           IDFFGALRARVYDDEVRKW+   G++  GK+LVNS++GP TF+QPKM+++KLL+YG+MLV
Sbjct: 344 IDFFGALRARVYDDEVRKWISGVGVDATGKKLVNSKEGPPTFDQPKMSLDKLLQYGNMLV 403

Query: 551 QEQDNVKRVQLADTYMSXAALGDANQDAM 637
           QEQ+NVKRVQLAD Y++ AALG+AN+DA+
Sbjct: 404 QEQENVKRVQLADKYLNEAALGNANEDAI 432

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>RCA_SPIOL (P10871) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 472

 Score =  363 bits (931), Expect = e-100
 Identities = 172/209 (82%), Positives = 192/209 (91%)
 Frame = +2

Query: 11  MCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIV 190
           MC LFINDL+ GAGRMGGTTQYTVNNQMVNATLMNIAD PTNVQLPGMYNK++N RVPI+
Sbjct: 220 MCALFINDLEPGAGRMGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKQDNARVPII 279

Query: 191 VTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQS 370
           VTGNDFSTLYAPLIRDGRMEKFYWAPTR+DRIGVC GIF+TD V  E VVK+VD FPGQS
Sbjct: 280 VTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCTGIFKTDKVPAEHVVKLVDAFPGQS 339

Query: 371 IDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLV 550
           IDFFGALRARVY DEVRKWV S G++N+GK+LVNS+DGP  FEQP+MT++KL+EYG+MLV
Sbjct: 340 IDFFGALRARVYHDEVRKWVNSVGVDNVGKKLVNSKDGPPVFEQPEMTLQKLMEYGNMLV 399

Query: 551 QEQDNVKRVQLADTYMSXAALGDANQDAM 637
           QEQ+NVKRVQLAD YMS AALGDAN+DA+
Sbjct: 400 QEQENVKRVQLADQYMSSAALGDANKDAI 428

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>RCA_PHAVU (O64981) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 441

 Score =  353 bits (907), Expect = 2e-97
 Identities = 165/209 (78%), Positives = 192/209 (91%)
 Frame = +2

Query: 11  MCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIV 190
           MC LFINDLDAGAGR+GGTTQYTVNNQMVNATLMNIAD PTNVQLPGMYNKE+N RVPI+
Sbjct: 226 MCVLFINDLDAGAGRLGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEDNARVPII 285

Query: 191 VTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQS 370
           VTGNDFSTLYAPLIRDGRMEKFYWAPTR+DRIGVCKGIF+TD V ++ +V++VD  PGQS
Sbjct: 286 VTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRTDGVPEKDIVELVDKHPGQS 345

Query: 371 IDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLV 550
           IDFFGALRARVYDDEVRKW+   G++++GK+LVNS++GP TF+QPKMT++KLL Y  MLV
Sbjct: 346 IDFFGALRARVYDDEVRKWISGVGVDSVGKKLVNSKEGPPTFDQPKMTLDKLLLYASMLV 405

Query: 551 QEQDNVKRVQLADTYMSXAALGDANQDAM 637
           QEQ+NVKRVQLAD Y++ AALG+AN+DA+
Sbjct: 406 QEQENVKRVQLADQYLNEAALGNANEDAI 434

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>RCA_CUCSA (Q01587) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 413

 Score =  340 bits (872), Expect = 2e-93
 Identities = 159/191 (83%), Positives = 176/191 (92%)
 Frame = +2

Query: 11  MCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIV 190
           MCCLFINDLDAGAGR+GGTTQYTVNNQMVNATLMNIAD PTNVQLPGMYNKEENPRVPI+
Sbjct: 219 MCCLFINDLDAGAGRLGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEENPRVPII 278

Query: 191 VTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQS 370
           VTGNDFSTLYAPLIRDGRM+KFYWAPTR+DRIG+C GIF+TD V  E +VK+VDTFPGQS
Sbjct: 279 VTGNDFSTLYAPLIRDGRMDKFYWAPTREDRIGICTGIFRTDGVPFEDIVKLVDTFPGQS 338

Query: 371 IDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLV 550
           IDFFGALRARVYDDEVRKW    G+E IG+ LVNS++ P TF+QPKMT+EKLLEYG+MLV
Sbjct: 339 IDFFGALRARVYDDEVRKWAVGVGVERIGRNLVNSKESPPTFDQPKMTIEKLLEYGNMLV 398

Query: 551 QEQDNVKRVQL 583
            EQ+NVKRV+L
Sbjct: 399 MEQENVKRVKL 409

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>RCA_CHLRE (P23489) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 408

 Score =  298 bits (762), Expect = 1e-80
 Identities = 147/201 (73%), Positives = 164/201 (81%)
 Frame = +2

Query: 11  MCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIV 190
           MC LFINDLDAGAGRMG TTQYTVNNQMVNATLMNIAD PTNVQLPG+Y  EE PRVPIV
Sbjct: 195 MCSLFINDLDAGAGRMGDTTQYTVNNQMVNATLMNIADNPTNVQLPGVYKNEEIPRVPIV 254

Query: 191 VTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQS 370
            TGNDFSTLYAPLIRDGRMEK+YW PTR+DRIGVC GIFQ DNV    V  +VDTFPGQS
Sbjct: 255 CTGNDFSTLYAPLIRDGRMEKYYWNPTREDRIGVCMGIFQEDNVQRREVENLVDTFPGQS 314

Query: 371 IDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLV 550
           IDFFGALRARVYDD VR+W+  TG++ IG++LVN+R   V   +  M +  L++YG  LV
Sbjct: 315 IDFFGALRARVYDDMVRQWITDTGVDKIGQQLVNARQ-KVAMPKVSMDLNVLIKYGKSLV 373

Query: 551 QEQDNVKRVQLADTYMSXAAL 613
            EQ+NVKRVQLAD Y+S A L
Sbjct: 374 DEQENVKRVQLADAYLSGAEL 394

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>RCA_ANASC (Q06721) Ribulose bisphosphate carboxylase/oxygenase activase|
           (RuBisCO activase) (RA)
          Length = 415

 Score =  244 bits (623), Expect = 2e-64
 Identities = 116/198 (58%), Positives = 145/198 (73%)
 Frame = +2

Query: 2   RVSMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRV 181
           R  MC L INDLDAGAGR    TQYTVN Q+VNATLMNIAD PT+VQLPG Y+     RV
Sbjct: 92  RGKMCVLMINDLDAGAGRFDEGTQYTVNTQLVNATLMNIADNPTDVQLPGSYDSTPLRRV 151

Query: 182 PIVVTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFP 361
           PI+VTGNDFSTLYAPLIRDGRMEKFYW P RD+++G+  GIF  D +S   V K+VD+FP
Sbjct: 152 PIIVTGNDFSTLYAPLIRDGRMEKFYWEPHRDEKVGIVGGIFAEDGLSQRDVEKLVDSFP 211

Query: 362 GQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGH 541
            QSIDFF ALR+R+YD+++R ++   G EN+  R+VNS +GP  F++P  T+  L+E  +
Sbjct: 212 NQSIDFFSALRSRIYDEQIRDFIHQVGYENVSLRVVNSLEGPPAFKKPDFTLSHLIESAN 271

Query: 542 MLVQEQDNVKRVQLADTY 595
            +V EQ  ++  QL D Y
Sbjct: 272 FMVAEQKRIETSQLVDEY 289

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>RCA_ANASP (P58555) Ribulose bisphosphate carboxylase/oxygenase activase|
           (RuBisCO activase) (RA)
          Length = 414

 Score =  239 bits (610), Expect = 5e-63
 Identities = 115/198 (58%), Positives = 143/198 (72%)
 Frame = +2

Query: 2   RVSMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRV 181
           R  MC L INDLDAGAGR    TQYTVN Q+VNATLMNIAD PT+VQLPG Y+     RV
Sbjct: 92  RGKMCVLMINDLDAGAGRFDEGTQYTVNTQLVNATLMNIADNPTDVQLPGSYDSNPIRRV 151

Query: 182 PIVVTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFP 361
           PI+VTGNDFSTLYAPLIRDGRMEKFYW P RDD++G+  GIF  D +S   + ++VDTFP
Sbjct: 152 PIIVTGNDFSTLYAPLIRDGRMEKFYWEPNRDDKVGIVGGIFAEDGLSQREIEQLVDTFP 211

Query: 362 GQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGH 541
            QSIDFF ALR+R+YD ++R ++   G E I  R+VNS + P  F++P  ++  L+E G+
Sbjct: 212 KQSIDFFSALRSRIYDIQIRDFIHKVGFERISLRVVNSLEAPPEFKKPDFSLAHLIESGN 271

Query: 542 MLVQEQDNVKRVQLADTY 595
           +++ EQ  V   QL D Y
Sbjct: 272 LVLGEQQRVDNSQLVDEY 289

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>RCA_POPEU (P84562) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast (RuBisCO activase) (RA) (Fragments)
          Length = 32

 Score = 47.0 bits (110), Expect = 5e-05
 Identities = 27/60 (45%), Positives = 30/60 (50%)
 Frame = +2

Query: 344 IVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEK 523
           +VDTFPGQSIDFFGAL                            R+GP TFEQP MT+EK
Sbjct: 1   LVDTFPGQSIDFFGAL----------------------------REGPPTFEQPAMTIEK 32

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>SYL_PSESM (Q87VX3) Leucyl-tRNA synthetase (EC 6.1.1.4) (Leucine--tRNA ligase)|
            (LeuRS)
          Length = 868

 Score = 31.6 bits (70), Expect = 2.1
 Identities = 33/140 (23%), Positives = 54/140 (38%), Gaps = 4/140 (2%)
 Frame = -2

Query: 637  HRILVSITQSCXAHVGVSKLHTLDIVLLLDEHVPVXXXXXXXXXXXLEGHGPVPRVHQPL 458
            HR L  + +   AHVG     +LDI  L DE   V            +  G   + +  +
Sbjct: 675  HRFLRRVWRLAQAHVGQGASGSLDIAALTDEQKAVRRSIHQAIKQASQDIGQNQKFNTAV 734

Query: 457  ANVLDSGRADPLAHLIVVHPSTQSTEKVNGLSWEGVDDLDDRL--VTDIVGLE--DTLAD 290
            A V        +  + V+  + Q+T +   L  EG++ +   L  +T  +  E    L  
Sbjct: 735  AQV--------MTLMNVLEKAPQATPQDRALLQEGLETVTLLLAPITPHISHELWTQLGH 786

Query: 289  TDTVVTGGSPVELLHTTITD 230
             + V+  G PV   H  + D
Sbjct: 787  NEPVIDAGWPVFDAHALVQD 806

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>MAGL2_HUMAN (Q9UJ55) MAGE-like protein 2 (Necdin-like protein 1) (Protein nM15)|
          Length = 529

 Score = 31.2 bits (69), Expect = 2.7
 Identities = 21/81 (25%), Positives = 30/81 (37%), Gaps = 2/81 (2%)
 Frame = -1

Query: 290 HRYGRHGWEPSRTSPYDHHGSEEXXXXXXXXXXXRWAHGGSPPCCTCQGAARWWGHR--R 117
           H    H W+  R  P+++    +            W H  +P     +G + W G    R
Sbjct: 181 HTLAFHDWQGPR--PWENLNLSDWEVQSPIQVSGDWEHPNTP-----RGLSGWEGPSTSR 233

Query: 116 CSSGWRSPSGC*RCTAWFRPS 54
             SGW  PS     +AW  PS
Sbjct: 234 ILSGWEGPSASWALSAWEGPS 254

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>FILA_HUMAN (P20930) Filaggrin|
          Length = 4061

 Score = 30.8 bits (68), Expect = 3.6
 Identities = 18/46 (39%), Positives = 20/46 (43%), Gaps = 4/46 (8%)
 Frame = +1

Query: 40   RWCG*DGRNH--AVHRQQPDGERHPDEHR--RCPHQRAAPWHVQQG 165
            RW G   RNH  +   Q  DG RHP  H   R  H  +A    Q G
Sbjct: 3554 RWSGSASRNHRGSAQEQSRDGSRHPTSHHEDRAGHGHSAESSRQSG 3599



 Score = 30.0 bits (66), Expect = 6.1
 Identities = 18/46 (39%), Positives = 21/46 (45%), Gaps = 4/46 (8%)
 Frame = +1

Query: 40   RWCG*DGRNH--AVHRQQPDGERHPDEHR--RCPHQRAAPWHVQQG 165
            RW G   RNH  +   Q  DG RHP  H+  R  H  +A    Q G
Sbjct: 2906 RWSGSASRNHHGSAQEQLRDGSRHPRSHQEDRAGHGHSADSSRQSG 2951



 Score = 30.0 bits (66), Expect = 6.1
 Identities = 18/46 (39%), Positives = 21/46 (45%), Gaps = 4/46 (8%)
 Frame = +1

Query: 40   RWCG*DGRNH--AVHRQQPDGERHPDEHR--RCPHQRAAPWHVQQG 165
            RW G   RNH  +   Q  DG RHP  H+  R  H  +A    Q G
Sbjct: 2582 RWSGSASRNHHGSAQEQLRDGSRHPRSHQEDRAGHGHSADSSRQSG 2627



 Score = 30.0 bits (66), Expect = 6.1
 Identities = 18/46 (39%), Positives = 20/46 (43%), Gaps = 4/46 (8%)
 Frame = +1

Query: 40   RWCG*DGRNH--AVHRQQPDGERHPDEHR--RCPHQRAAPWHVQQG 165
            RW G   RNH  +   Q  DG RHP  H   R  H  +A    Q G
Sbjct: 1933 RWSGSASRNHLGSAWEQSRDGSRHPGSHHEDRAGHGHSADSSRQSG 1978

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>EPHB6_PANTR (P0C0K6) Ephrin type-B receptor 6 precursor (Tyrosine-protein|
           kinase-defective receptor EPH-6)
          Length = 1005

 Score = 30.8 bits (68), Expect = 3.6
 Identities = 17/45 (37%), Positives = 20/45 (44%), Gaps = 3/45 (6%)
 Frame = -1

Query: 176 GGSPPCCTCQGAARWW---GHRRCSSGWRSPSGC*RCTAWFRPSY 51
           GGSPP   C G  +W    G  RC  G++   G   C A  R  Y
Sbjct: 262 GGSPPRLHCNGEGKWMVAVGGCRCQPGYQPARGDKACQACPRGLY 306

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>EPHB6_HUMAN (O15197) Ephrin type-B receptor 6 precursor (Tyrosine-protein|
           kinase-defective receptor EPH-6) (HEP)
          Length = 1006

 Score = 30.8 bits (68), Expect = 3.6
 Identities = 17/45 (37%), Positives = 20/45 (44%), Gaps = 3/45 (6%)
 Frame = -1

Query: 176 GGSPPCCTCQGAARWW---GHRRCSSGWRSPSGC*RCTAWFRPSY 51
           GGSPP   C G  +W    G  RC  G++   G   C A  R  Y
Sbjct: 263 GGSPPRLHCNGEGKWMVAVGGCRCQPGYQPARGDKACQACPRGLY 307

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>EPHB6_RAT (P0C0K7) Ephrin type-B receptor 6 precursor (Tyrosine-protein|
           kinase-defective receptor EPH-6)
          Length = 1013

 Score = 30.4 bits (67), Expect = 4.6
 Identities = 18/45 (40%), Positives = 19/45 (42%), Gaps = 3/45 (6%)
 Frame = -1

Query: 176 GGSPPCCTCQGAARWW---GHRRCSSGWRSPSGC*RCTAWFRPSY 51
           GGSPP   C G  RW    G  RC  G +   G   C A    SY
Sbjct: 272 GGSPPRLHCNGEGRWMVAVGGCRCQPGHQPARGDKLCQACPEGSY 316

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>EPHB6_MOUSE (O08644) Ephrin type-B receptor 6 precursor (Tyrosine-protein|
           kinase-defective receptor EPH-6) (MEP)
          Length = 1014

 Score = 30.4 bits (67), Expect = 4.6
 Identities = 18/45 (40%), Positives = 19/45 (42%), Gaps = 3/45 (6%)
 Frame = -1

Query: 176 GGSPPCCTCQGAARWW---GHRRCSSGWRSPSGC*RCTAWFRPSY 51
           GGSPP   C G  RW    G  RC  G +   G   C A    SY
Sbjct: 273 GGSPPRLHCNGEGRWMVAVGGCRCQPGHQPARGDKLCQACPEGSY 317

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>DTD_BURPS (Q63QX1) D-tyrosyl-tRNA(Tyr) deacylase (EC 3.1.-.-)|
          Length = 152

 Score = 30.4 bits (67), Expect = 4.6
 Identities = 25/89 (28%), Positives = 41/89 (46%), Gaps = 6/89 (6%)
 Frame = +2

Query: 26  INDLDAGAGRMGG---TTQYTV---NNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPI 187
           +++LD GAGR GG    +Q+T+    N  +  +    A      +L   + +    R PI
Sbjct: 66  VSNLD-GAGRAGGLLLVSQFTLAADTNSGLRPSFTPAAPPDEGERLFDYFVRRARERHPI 124

Query: 188 VVTGNDFSTLYAPLIRDGRMEKFYWAPTR 274
           V TG   + +   L+ DG +   +W  TR
Sbjct: 125 VATGEFGADMQVSLVNDGPVT--FWLQTR 151

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>DTD_BURMA (Q62HB3) D-tyrosyl-tRNA(Tyr) deacylase (EC 3.1.-.-)|
          Length = 152

 Score = 30.4 bits (67), Expect = 4.6
 Identities = 25/89 (28%), Positives = 41/89 (46%), Gaps = 6/89 (6%)
 Frame = +2

Query: 26  INDLDAGAGRMGG---TTQYTV---NNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPI 187
           +++LD GAGR GG    +Q+T+    N  +  +    A      +L   + +    R PI
Sbjct: 66  VSNLD-GAGRAGGLLLVSQFTLAADTNSGLRPSFTPAAPPDEGERLFDYFVRRARERHPI 124

Query: 188 VVTGNDFSTLYAPLIRDGRMEKFYWAPTR 274
           V TG   + +   L+ DG +   +W  TR
Sbjct: 125 VATGEFGADMQVSLVNDGPVT--FWLQTR 151

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>YNEI_ECOLI (P76149) Aldehyde dehydrogenase-like protein yneI (EC 1.2.1.-)|
          Length = 462

 Score = 30.4 bits (67), Expect = 4.6
 Identities = 14/42 (33%), Positives = 23/42 (54%)
 Frame = -2

Query: 427 PLAHLIVVHPSTQSTEKVNGLSWEGVDDLDDRLVTDIVGLED 302
           P  H I ++P+T   E+++ L W G DD+++ L     G  D
Sbjct: 5   PATHAISINPATG--EQLSVLPWAGADDIENALQLAAAGFRD 44

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>LEPA_HELPY (O25122) GTP-binding protein lepA|
          Length = 602

 Score = 30.4 bits (67), Expect = 4.6
 Identities = 20/79 (25%), Positives = 37/79 (46%)
 Frame = +2

Query: 341 KIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVE 520
           KI+ T P  S DF   L+A +YD     ++G+         LV   DG +  EQ  + + 
Sbjct: 180 KIITTIPAPSGDFNAPLKALIYDSWFDNYLGALA-------LVRIMDGSINTEQEILVMG 232

Query: 521 KLLEYGHMLVQEQDNVKRV 577
              ++G + +   + +K++
Sbjct: 233 TGKKHGVLGLYYPNPLKKI 251

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>GP116_HUMAN (Q8IZF2) Probable G-protein coupled receptor 116 precursor|
          Length = 1346

 Score = 30.0 bits (66), Expect = 6.1
 Identities = 14/35 (40%), Positives = 21/35 (60%)
 Frame = -3

Query: 591 VSASCTRLTLSCSWTSMCPYSSSFSTVIFGCSKVT 487
           + +SC+R TL    T  CP  SS +TVI+ C  ++
Sbjct: 420 IDSSCSRYTLKADGTQ-CPSGSSGTTVIYTCEFIS 453

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>PNPT1_MOUSE (Q8K1R3) Polyribonucleotide nucleotidyltransferase 1, mitochondrial|
           precursor (EC 2.7.7.8) (PNPase 1) (Polynucleotide
           phosphorylase-like protein) (PNPase old-35) (3'-5' RNA
           exonuclease OLD35)
          Length = 783

 Score = 30.0 bits (66), Expect = 6.1
 Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 15/62 (24%)
 Frame = -2

Query: 340 DDRLVTDIVGLEDTLADTDTVVTG---------------GSPVELLHTTITDQRSVERRE 206
           D RL+TDI+G+ED   D D  + G               G P++++   I  Q SV ++E
Sbjct: 526 DYRLLTDILGIEDYNGDMDFKIAGTNKGITALQADIKLPGVPIKIIMEAI-QQASVAKKE 584

Query: 205 IV 200
           I+
Sbjct: 585 IL 586

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>RL3_RHOPA (P60456) 50S ribosomal protein L3 (RRP-L3)|
          Length = 241

 Score = 29.6 bits (65), Expect = 7.9
 Identities = 37/159 (23%), Positives = 60/159 (37%), Gaps = 15/159 (9%)
 Frame = +2

Query: 47  AGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIVVTGNDFSTLYAP 226
           A ++G T  +T   + +  T++ +     N Q+ G   KE+N  V + V      T+Y P
Sbjct: 7   AQKVGMTRVFTEAGEHIPVTVLKLG----NCQVLGHRTKEKNGYVALQVGSGSRKTVYMP 62

Query: 227 LIRDGRMEKFYWAPTR--------DDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSID-- 376
               G+       P R        +D +       Q D+      V +  T  G+     
Sbjct: 63  KAERGQFAAAKVEPKRKVEEFRVSEDALLPVGAEIQADHFVVGQFVDVTGTSTGKGFAGG 122

Query: 377 ----FFGALRARVYDDEVRKWVGST-GIENIGKRLVNSR 478
                FG LRA        + +GST G ++ GK   N +
Sbjct: 123 MKRWNFGGLRATHGVSVSHRSIGSTGGRQDPGKTFKNKK 161

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>LRC24_MOUSE (Q8BHA1) Leucine-rich repeat-containing protein 24 precursor|
          Length = 521

 Score = 29.6 bits (65), Expect = 7.9
 Identities = 16/37 (43%), Positives = 26/37 (70%), Gaps = 1/37 (2%)
 Frame = +2

Query: 425 WVGSTGIENIGKRLVNSRDGPVT-FEQPKMTVEKLLE 532
           W+GS  I+  G+RL++SRD  +T  E P++ ++ LLE
Sbjct: 222 WLGSW-IKEGGRRLLSSRDKKITCAEPPRLALQSLLE 257

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>PNPT1_PONPY (Q5RCW2) Polyribonucleotide nucleotidyltransferase 1, mitochondrial|
           precursor (EC 2.7.7.8) (PNPase 1)
          Length = 783

 Score = 29.6 bits (65), Expect = 7.9
 Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 15/62 (24%)
 Frame = -2

Query: 340 DDRLVTDIVGLEDTLADTDTVVTG---------------GSPVELLHTTITDQRSVERRE 206
           D RL+TDI+G+ED   D D  + G               G P++++   I  Q SV ++E
Sbjct: 526 DYRLLTDILGIEDYNGDMDFKIAGTNKGITALQADIKLPGIPIKIVMEAI-QQASVAKKE 584

Query: 205 IV 200
           I+
Sbjct: 585 IL 586

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>PNPT1_HUMAN (Q8TCS8) Polyribonucleotide nucleotidyltransferase 1, mitochondrial|
           precursor (EC 2.7.7.8) (PNPase 1) (Polynucleotide
           phosphorylase-like protein) (PNPase old-35) (3'-5' RNA
           exonuclease OLD35)
          Length = 783

 Score = 29.6 bits (65), Expect = 7.9
 Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 15/62 (24%)
 Frame = -2

Query: 340 DDRLVTDIVGLEDTLADTDTVVTG---------------GSPVELLHTTITDQRSVERRE 206
           D RL+TDI+G+ED   D D  + G               G P++++   I  Q SV ++E
Sbjct: 526 DYRLLTDILGIEDYNGDMDFKIAGTNKGITALQADIKLPGIPIKIVMEAI-QQASVAKKE 584

Query: 205 IV 200
           I+
Sbjct: 585 IL 586

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>PRS4_RAT (P62193) 26S protease regulatory subunit 4 (P26s4) (Proteasome 26S|
           subunit ATPase 1)
          Length = 440

 Score = 29.6 bits (65), Expect = 7.9
 Identities = 32/129 (24%), Positives = 60/129 (46%), Gaps = 11/129 (8%)
 Frame = +2

Query: 20  LFINDLDAGAGRMGGTTQYTVNN---QMVNATLMNIADAPTNVQLPGMYNKEENPRVPIV 190
           +FI+++DA      GT +Y  N+   + +  T++ + +     QL G  ++ +   V ++
Sbjct: 282 VFIDEIDAI-----GTKRYDSNSGGEREIQRTMLELLN-----QLDGFDSRGD---VKVI 328

Query: 191 VTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRIGVCKGIFQ--------TDNVSDESVVKI 346
           +  N   TL   LIR GR+++    P  D++    K IFQ         D+V+ + ++  
Sbjct: 329 MATNRIETLDPALIRPGRIDRKIEFPLPDEK--TKKRIFQIHTSRMTLADDVTLDDLIMA 386

Query: 347 VDTFPGQSI 373
            D   G  I
Sbjct: 387 KDDLSGADI 395

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>PRS4_MOUSE (P62192) 26S protease regulatory subunit 4 (P26s4) (Proteasome 26S|
           subunit ATPase 1)
          Length = 440

 Score = 29.6 bits (65), Expect = 7.9
 Identities = 32/129 (24%), Positives = 60/129 (46%), Gaps = 11/129 (8%)
 Frame = +2

Query: 20  LFINDLDAGAGRMGGTTQYTVNN---QMVNATLMNIADAPTNVQLPGMYNKEENPRVPIV 190
           +FI+++DA      GT +Y  N+   + +  T++ + +     QL G  ++ +   V ++
Sbjct: 282 VFIDEIDAI-----GTKRYDSNSGGEREIQRTMLELLN-----QLDGFDSRGD---VKVI 328

Query: 191 VTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRIGVCKGIFQ--------TDNVSDESVVKI 346
           +  N   TL   LIR GR+++    P  D++    K IFQ         D+V+ + ++  
Sbjct: 329 MATNRIETLDPALIRPGRIDRKIEFPLPDEK--TKKRIFQIHTSRMTLADDVTLDDLIMA 386

Query: 347 VDTFPGQSI 373
            D   G  I
Sbjct: 387 KDDLSGADI 395

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>PRS4_HUMAN (P62191) 26S protease regulatory subunit 4 (P26s4) (Proteasome 26S|
           subunit ATPase 1)
          Length = 440

 Score = 29.6 bits (65), Expect = 7.9
 Identities = 32/129 (24%), Positives = 60/129 (46%), Gaps = 11/129 (8%)
 Frame = +2

Query: 20  LFINDLDAGAGRMGGTTQYTVNN---QMVNATLMNIADAPTNVQLPGMYNKEENPRVPIV 190
           +FI+++DA      GT +Y  N+   + +  T++ + +     QL G  ++ +   V ++
Sbjct: 282 VFIDEIDAI-----GTKRYDSNSGGEREIQRTMLELLN-----QLDGFDSRGD---VKVI 328

Query: 191 VTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRIGVCKGIFQ--------TDNVSDESVVKI 346
           +  N   TL   LIR GR+++    P  D++    K IFQ         D+V+ + ++  
Sbjct: 329 MATNRIETLDPALIRPGRIDRKIEFPLPDEK--TKKRIFQIHTSRMTLADDVTLDDLIMA 386

Query: 347 VDTFPGQSI 373
            D   G  I
Sbjct: 387 KDDLSGADI 395

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>PRS4_CHICK (Q90732) 26S protease regulatory subunit 4 (P26s4) (Proteasome 26S|
           subunit ATPase 1)
          Length = 440

 Score = 29.6 bits (65), Expect = 7.9
 Identities = 32/129 (24%), Positives = 60/129 (46%), Gaps = 11/129 (8%)
 Frame = +2

Query: 20  LFINDLDAGAGRMGGTTQYTVNN---QMVNATLMNIADAPTNVQLPGMYNKEENPRVPIV 190
           +FI+++DA      GT +Y  N+   + +  T++ + +     QL G  ++ +   V ++
Sbjct: 282 VFIDEIDAI-----GTKRYDSNSGGEREIQRTMLELLN-----QLDGFDSRGD---VKVI 328

Query: 191 VTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRIGVCKGIFQ--------TDNVSDESVVKI 346
           +  N   TL   LIR GR+++    P  D++    K IFQ         D+V+ + ++  
Sbjct: 329 MATNRIETLDPALIRPGRIDRKIEFPLPDEK--TKKRIFQIHTSRMTLADDVTLDELIMA 386

Query: 347 VDTFPGQSI 373
            D   G  I
Sbjct: 387 KDDLSGADI 395


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 88,828,842
Number of Sequences: 219361
Number of extensions: 1875438
Number of successful extensions: 6330
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 6027
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6323
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5995743495
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result