No.
Definition
Score (bits)
E Value
1 gb|AY224493.1| Oryza sativa (japonica cultivar-group) isolate 30...
565
e-158
2 dbj|AK120907.1| Oryza sativa (japonica cultivar-group) cDNA clon...
557
e-155
3 ref|XM_464065.1| Oryza sativa (japonica cultivar-group), mRNA
256
8e-65
4 dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D...
170
4e-39
5 dbj|AP003761.3| Oryza sativa (japonica cultivar-group) genomic D...
170
4e-39
6 dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D...
119
1e-23
7 dbj|AP005647.3| Oryza sativa (japonica cultivar-group) genomic D...
119
1e-23
8 dbj|AP005474.3| Oryza sativa (japonica cultivar-group) genomic D...
119
1e-23
9 ref|NM_101533.3| Arabidopsis thaliana oxidoreductase AT1G16720 m...
54
6e-04
10 gb|AY128723.1| Arabidopsis thaliana unknown protein (At1g16720) ...
54
6e-04
11 gb|AY062632.1| Arabidopsis thaliana Unknown protein (At1g16720; ...
54
6e-04
12 gb|AC011808.4|AC011808 Arabidopsis thaliana chromosome I BAC F19...
48
0.036
13 gb|AC026237.4|AC026237 Arabidopsis thaliana chromosome I BAC F17...
48
0.036
14 gb|DQ160197.1| Homo sapiens RAD51-like 1 (S. cerevisiae) (RAD51L...
44
0.56
15 emb|AL157915.3|CNS01RGD Human chromosome 14 DNA sequence BAC R-6...
44
0.56
16 emb|AL136294.4|CNS01DVY Human chromosome 14 DNA sequence BAC C-2...
44
0.56
17 gb|AC152982.1| Mus musculus 10 BAC RP23-36F22 (Roswell Park Canc...
42
2.2
18 gb|AC115777.16| Mus musculus chromosome 6, clone RP23-139O6, com...
42
2.2
19 gb|AF233439.7| Homo sapiens chromosome 8 clones GS1-24F4, CTD-26...
42
2.2
20 gb|AF205406.5| Homo sapiens chromosome 8 clone SCb-633e22 map p2...
42
2.2
21 gb|AF298854.5| Homo sapiens chromosome 8 clone SCb-207i3 map p23...
42
2.2
22 emb|CR382335.12| Zebrafish DNA sequence from clone DKEY-56I16 in...
42
2.2
23 emb|AL158077.15| Human DNA sequence from clone RP11-471J7 on chr...
42
2.2
24 gb|AC118470.2| Homo sapiens chromosome 1 clone RP11-634B7, compl...
42
2.2
25 gb|AC021785.10| Homo sapiens chromosome , clone RP11-21C17, comp...
42
2.2
26 gb|AC160090.4| Mus musculus 6 BAC RP23-322E20 (Roswell Park Canc...
42
2.2
27 ref|NM_053922.1| Rattus norvegicus acetyl-Coenzyme A carboxylase...
40
8.7
28 gb|AE017180.1| Geobacter sulfurreducens PCA, complete genome
40
8.7
29 gb|DQ493871.1| Rattus norvegicus acetyl-Coenzyme A carboxylase 2...
40
8.7
30 gb|AC121842.3| Mus musculus BAC clone RP24-80L24 from chromosome...
40
8.7
31 emb|AL935308.10| Zebrafish DNA sequence from clone CH211-227H7 i...
40
8.7
32 gb|AC138735.3| Gallus gallus clone TAM31-15F7, complete sequence
40
8.7
33 gb|BC025830.1| Mus musculus RIKEN cDNA 4732466D17 gene, mRNA (cD...
40
8.7
34 gb|BC049922.1| Mus musculus RIKEN cDNA 4732466D17 gene, mRNA (cD...
40
8.7
35 gb|AC006454.4| Homo sapiens PAC clone RP5-852P6 from 7, complete...
40
8.7
36 gb|AC161805.4| Mus musculus chromosome 1, clone RP24-325N3, comp...
40
8.7
37 dbj|AK128969.1| Mus musculus cDNA fis, clone TRACH3014415, weakl...
40
8.7
38 gb|AC112253.3| Homo sapiens BAC clone RP11-792D21 from 4, comple...
40
8.7
39 dbj|AK143953.1| Mus musculus adult male kidney cDNA, RIKEN full-...
40
8.7
40 gb|AC160141.2| Gallus gallus BAC clone CH261-182D6 from chromoso...
40
8.7
41 gb|AC098818.3| Homo sapiens BAC clone RP11-109G23 from 4, comple...
40
8.7
42 gb|AC115001.11| Mus musculus chromosome 1, clone RP24-128M9, com...
40
8.7
43 gb|AC017028.11| Homo sapiens BAC clone RP11-275G7 from 2, comple...
40
8.7
44 emb|CR383683.17| Zebrafish DNA sequence from clone DKEY-114C3 in...
40
8.7
45 gb|AE015451.1| Pseudomonas putida KT2440 complete genome
40
8.7
46 gb|AC154370.1| Mus musculus BAC clone RP24-576A8 from 17, comple...
40
8.7
47 gb|AC159212.3| Gallus gallus BAC clone CH261-173O18 from chromos...
40
8.7
48 emb|CT009580.9| Mouse DNA sequence from clone RP23-133F14 on chr...
40
8.7
49 emb|AL928895.5| Mouse DNA sequence from clone RP23-338J3 on chro...
40
8.7
50 dbj|AB004329.1| Rattus norvegicus mRNA for acetyl-CoA carboxylas...
40
8.7
>dbj|AP008212.1 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
sequence
Length = 30731886
Score = 170 bits (86), Expect = 4e-39
Identities = 178/209 (85%), Gaps = 6/209 (2%)
Strand = Plus / Minus
Query: 260 caggattactacaatgagatggctcagctcagggctggtaaaagcagcaagagcaagctt 319
||||||||||||||||| |||||||||| |||||||||||||||||||||||||| ||
Sbjct: 29249180 caggattactacaatgaattggctcagcttagggctggtaaaagcagcaagagcaaactc 29249121
Query: 320 ttgatagcaaaatttaaatccgccaagtctctgaagggttgggaggtgaaccagggatct 379
||||||||||||||||||| ||||||||||||| |||||||||||| |||||||||||
Sbjct: 29249120 ctgatagcaaaatttaaatctcccaagtctctgaatggttgggaggtggaccagggatct 29249061
Query: 380 tacttcccgaatgcatatgtttctggttctagtttcgatgaaggtatcgatgcatccttt 439
|| || || || ||| || || |||| || |||||||||||||||||||| |||
Sbjct: 29249060 tattttccaaacacatttgctt------ctaggtttgatgaaggtatcgatgcatcattt 29249007
Query: 440 gaattttcagaaggtggccaggctgtttt 468
|| |||||||| | ||| || ||||||||
Sbjct: 29249006 gacttttcagaggctggtcaagctgtttt 29248978
Score = 135 bits (68), Expect = 2e-28
Identities = 86/92 (93%)
Strand = Plus / Minus
Query: 548 aggtatgatggcttgcttctttcagtgggtggaaatggaagatcatatgttgttattctt 607
|||||||||||||| ||| |||| ||||| ||||||||||||||||||||||||||||||
Sbjct: 29248671 aggtatgatggcttacttttttcggtgggaggaaatggaagatcatatgttgttattctt 29248612
Query: 608 gagactggtccactggctgacacctcgcagag 639
||||||||||| |||||||||||||| |||||
Sbjct: 29248611 gagactggtccgctggctgacacctcccagag 29248580
Score = 129 bits (65), Expect = 1e-26
Identities = 178/216 (82%)
Strand = Plus / Minus
Query: 48 aggctttagttagaagggacgatgccgaggtgatcgacatgcttcccaggtcggtggaca 107
||||||||||||||||| | ||||| || ||||| || ||||| || ||||||||||| |
Sbjct: 29249503 aggctttagttagaaggaatgatgctgaagtgatagatatgctcccaaggtcggtggata 29249444
Query: 108 tcgctgttggcgatgttggcgatcctctggctgtgcaatcggccgtgtcaggctgcagca 167
| | ||| || |||||||| |||||| |||| ||||||| || ||||| |||||||
Sbjct: 29249443 ttgttgtcggtgatgttggtgatccttcaactgtcaaatcggctgtatcaggttgcagca 29249384
Query: 168 agattatctattgcgcaaccgcgcgctcaaccattaccggggacctcaacngagttgata 227
|||| |||||||||||||| || |||||||| ||||| || ||||| || | |||||||
Sbjct: 29249383 agataatctattgcgcaactgcacgctcaactattactggagacctaaatagggttgata 29249324
Query: 228 accaaggagtcaggaacgtcagcaaggctttccagg 263
| |||||||| ||||| || || |||||||||||||
Sbjct: 29249323 atcaaggagtaaggaatgttagtaaggctttccagg 29249288
Score = 91.7 bits (46), Expect = 3e-15
Identities = 76/86 (88%)
Strand = Plus / Minus
Query: 471 caggatttgtttttacaagaggtgggtatgtcgagatatcaaagaggctctctctccctt 530
||||||||||||| ||||||||||| ||||| ||||||||||| ||||| ||||| ||||
Sbjct: 29248856 caggatttgttttcacaagaggtggatatgttgagatatcaaaaaggctatctcttcctt 29248797
Query: 531 taggttccaccctagacaggtatgat 556
| || || || |||||||||||||||
Sbjct: 29248796 tgggatctactctagacaggtatgat 29248771
Score = 83.8 bits (42), Expect = 6e-13
Identities = 48/50 (96%)
Strand = Plus / Minus
Query: 1 cggccgcatcgtcgtccgcaagctcatgctccgaggctacaatgtcaagg 50
||||||||||||||||||||||||||||||||| || |||||||||||||
Sbjct: 29250121 cggccgcatcgtcgtccgcaagctcatgctccgcgggtacaatgtcaagg 29250072
>dbj|AP003761.3 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
clone:P0018H04
Length = 142053
Score = 170 bits (86), Expect = 4e-39
Identities = 178/209 (85%), Gaps = 6/209 (2%)
Strand = Plus / Minus
Query: 260 caggattactacaatgagatggctcagctcagggctggtaaaagcagcaagagcaagctt 319
||||||||||||||||| |||||||||| |||||||||||||||||||||||||| ||
Sbjct: 11978 caggattactacaatgaattggctcagcttagggctggtaaaagcagcaagagcaaactc 11919
Query: 320 ttgatagcaaaatttaaatccgccaagtctctgaagggttgggaggtgaaccagggatct 379
||||||||||||||||||| ||||||||||||| |||||||||||| |||||||||||
Sbjct: 11918 ctgatagcaaaatttaaatctcccaagtctctgaatggttgggaggtggaccagggatct 11859
Query: 380 tacttcccgaatgcatatgtttctggttctagtttcgatgaaggtatcgatgcatccttt 439
|| || || || ||| || || |||| || |||||||||||||||||||| |||
Sbjct: 11858 tattttccaaacacatttgctt------ctaggtttgatgaaggtatcgatgcatcattt 11805
Query: 440 gaattttcagaaggtggccaggctgtttt 468
|| |||||||| | ||| || ||||||||
Sbjct: 11804 gacttttcagaggctggtcaagctgtttt 11776
Score = 135 bits (68), Expect = 2e-28
Identities = 86/92 (93%)
Strand = Plus / Minus
Query: 548 aggtatgatggcttgcttctttcagtgggtggaaatggaagatcatatgttgttattctt 607
|||||||||||||| ||| |||| ||||| ||||||||||||||||||||||||||||||
Sbjct: 11469 aggtatgatggcttacttttttcggtgggaggaaatggaagatcatatgttgttattctt 11410
Query: 608 gagactggtccactggctgacacctcgcagag 639
||||||||||| |||||||||||||| |||||
Sbjct: 11409 gagactggtccgctggctgacacctcccagag 11378
Score = 129 bits (65), Expect = 1e-26
Identities = 178/216 (82%)
Strand = Plus / Minus
Query: 48 aggctttagttagaagggacgatgccgaggtgatcgacatgcttcccaggtcggtggaca 107
||||||||||||||||| | ||||| || ||||| || ||||| || ||||||||||| |
Sbjct: 12301 aggctttagttagaaggaatgatgctgaagtgatagatatgctcccaaggtcggtggata 12242
Query: 108 tcgctgttggcgatgttggcgatcctctggctgtgcaatcggccgtgtcaggctgcagca 167
| | ||| || |||||||| |||||| |||| ||||||| || ||||| |||||||
Sbjct: 12241 ttgttgtcggtgatgttggtgatccttcaactgtcaaatcggctgtatcaggttgcagca 12182
Query: 168 agattatctattgcgcaaccgcgcgctcaaccattaccggggacctcaacngagttgata 227
|||| |||||||||||||| || |||||||| ||||| || ||||| || | |||||||
Sbjct: 12181 agataatctattgcgcaactgcacgctcaactattactggagacctaaatagggttgata 12122
Query: 228 accaaggagtcaggaacgtcagcaaggctttccagg 263
| |||||||| ||||| || || |||||||||||||
Sbjct: 12121 atcaaggagtaaggaatgttagtaaggctttccagg 12086
Score = 91.7 bits (46), Expect = 3e-15
Identities = 76/86 (88%)
Strand = Plus / Minus
Query: 471 caggatttgtttttacaagaggtgggtatgtcgagatatcaaagaggctctctctccctt 530
||||||||||||| ||||||||||| ||||| ||||||||||| ||||| ||||| ||||
Sbjct: 11654 caggatttgttttcacaagaggtggatatgttgagatatcaaaaaggctatctcttcctt 11595
Query: 531 taggttccaccctagacaggtatgat 556
| || || || |||||||||||||||
Sbjct: 11594 tgggatctactctagacaggtatgat 11569
Score = 83.8 bits (42), Expect = 6e-13
Identities = 48/50 (96%)
Strand = Plus / Minus
Query: 1 cggccgcatcgtcgtccgcaagctcatgctccgaggctacaatgtcaagg 50
||||||||||||||||||||||||||||||||| || |||||||||||||
Sbjct: 12919 cggccgcatcgtcgtccgcaagctcatgctccgcgggtacaatgtcaagg 12870
>dbj|AP008208.1 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
sequence
Length = 35954743
Score = 119 bits (60), Expect = 1e-23
Identities = 155/187 (82%)
Strand = Plus / Plus
Query: 77 gtgatcgacatgcttcccaggtcggtggacatcgctgttggcgatgttggcgatcctctg 136
||||||||||||||||| || || |||||||| | ||||| |||||||||||| ||
Sbjct: 2002848 gtgatcgacatgcttccaagatctgtggacattgtggttggtgatgttggcgatgcttct 2002907
Query: 137 gctgtgcaatcggccgtgtcaggctgcagcaagattatctattgcgcaaccgcgcgctca 196
| || ||| | |||||||||||||||| |||| | ||||| |||||||| || || |||
Sbjct: 2002908 tcagttcaagctgccgtgtcaggctgcaacaaggtaatctactgcgcaactgcacggtca 2002967
Query: 197 accattaccggggacctcaacngagttgataaccaaggagtcaggaacgtcagcaaggct 256
|| |||||||| || |||||| |||||||||||||||| || ||||| |||| ||||||
Sbjct: 2002968 acgattaccggtgatctcaacagagttgataaccaaggcgtgaggaatgtcaccaaggcc 2003027
Query: 257 ttccagg 263
|||||||
Sbjct: 2003028 ttccagg 2003034
Score = 101 bits (51), Expect = 3e-18
Identities = 75/83 (90%)
Strand = Plus / Plus
Query: 557 ggcttgcttctttcagtgggtggaaatggaagatcatatgttgttattcttgagactggt 616
||||| ||||| || ||||||||||||||||||||||||||| | || ||||||||||||
Sbjct: 2003672 ggcttacttctatccgtgggtggaaatggaagatcatatgttatcatccttgagactggt 2003731
Query: 617 ccactggctgacacctcgcagag 639
||||| ||||||||||| |||||
Sbjct: 2003732 ccactagctgacacctcacagag 2003754
Score = 83.8 bits (42), Expect = 6e-13
Identities = 48/50 (96%)
Strand = Plus / Plus
Query: 1 cggccgcatcgtcgtccgcaagctcatgctccgaggctacaatgtcaagg 50
||||||||||||||||||||||||||||||||| |||||||| |||||||
Sbjct: 2002462 cggccgcatcgtcgtccgcaagctcatgctccgtggctacaacgtcaagg 2002511
Score = 81.8 bits (41), Expect = 3e-12
Identities = 104/125 (83%)
Strand = Plus / Plus
Query: 260 caggattactacaatgagatggctcagctcagggctggtaaaagcagcaagagcaagctt 319
||||||||||||||| || |||||||| |||||||||||||||||||||||||| ||
Sbjct: 2003126 caggattactacaatcagttggctcagtcaagggctggtaaaagcagcaagagcaaactg 2003185
Query: 320 ttgatagcaaaatttaaatccgccaagtctctgaagggttgggaggtgaaccagggatct 379
| ||| || || || ||||| ||||| ||||| | || ||||| ||||| ||||||||
Sbjct: 2003186 tcgattgccaagttcaaatctgccaaatctcttcaaggatgggaagtgaatcagggatca 2003245
Query: 380 tactt 384
|||||
Sbjct: 2003246 tactt 2003250
Score = 50.1 bits (25), Expect = 0.009
Identities = 67/81 (82%)
Strand = Plus / Plus
Query: 476 tttgtttttacaagaggtgggtatgtcgagatatcaaagaggctctctctccctttaggt 535
|||||||| ||||||||||| ||||| || | || || |||| || ||||| |||||
Sbjct: 2003487 tttgttttcacaagaggtggatatgttgaagtgtcgaaacggctttcgctcccactaggt 2003546
Query: 536 tccaccctagacaggtatgat 556
|||||||||||||||| ||||
Sbjct: 2003547 tccaccctagacaggtgtgat 2003567
Score = 46.1 bits (23), Expect = 0.14
Identities = 53/63 (84%)
Strand = Plus / Plus
Query: 406 ttctagtttcgatgaaggtatcgatgcatcctttgaattttcagaaggtggccaggctgt 465
|||||| ||||||||||| | ||||||||| |||||| | || ||| ||| ||||||||
Sbjct: 2003266 ttctagattcgatgaaggcaccgatgcatcgtttgaaatatctgaaaatggacaggctgt 2003325
Query: 466 ttt 468
|||
Sbjct: 2003326 ttt 2003328
>dbj|AP005647.3 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
clone:OSJNBa0026E05
Length = 159860
Score = 119 bits (60), Expect = 1e-23
Identities = 155/187 (82%)
Strand = Plus / Plus
Query: 77 gtgatcgacatgcttcccaggtcggtggacatcgctgttggcgatgttggcgatcctctg 136
||||||||||||||||| || || |||||||| | ||||| |||||||||||| ||
Sbjct: 53056 gtgatcgacatgcttccaagatctgtggacattgtggttggtgatgttggcgatgcttct 53115
Query: 137 gctgtgcaatcggccgtgtcaggctgcagcaagattatctattgcgcaaccgcgcgctca 196
| || ||| | |||||||||||||||| |||| | ||||| |||||||| || || |||
Sbjct: 53116 tcagttcaagctgccgtgtcaggctgcaacaaggtaatctactgcgcaactgcacggtca 53175
Query: 197 accattaccggggacctcaacngagttgataaccaaggagtcaggaacgtcagcaaggct 256
|| |||||||| || |||||| |||||||||||||||| || ||||| |||| ||||||
Sbjct: 53176 acgattaccggtgatctcaacagagttgataaccaaggcgtgaggaatgtcaccaaggcc 53235
Query: 257 ttccagg 263
|||||||
Sbjct: 53236 ttccagg 53242
Score = 101 bits (51), Expect = 3e-18
Identities = 75/83 (90%)
Strand = Plus / Plus
Query: 557 ggcttgcttctttcagtgggtggaaatggaagatcatatgttgttattcttgagactggt 616
||||| ||||| || ||||||||||||||||||||||||||| | || ||||||||||||
Sbjct: 53880 ggcttacttctatccgtgggtggaaatggaagatcatatgttatcatccttgagactggt 53939
Query: 617 ccactggctgacacctcgcagag 639
||||| ||||||||||| |||||
Sbjct: 53940 ccactagctgacacctcacagag 53962
Score = 83.8 bits (42), Expect = 6e-13
Identities = 48/50 (96%)
Strand = Plus / Plus
Query: 1 cggccgcatcgtcgtccgcaagctcatgctccgaggctacaatgtcaagg 50
||||||||||||||||||||||||||||||||| |||||||| |||||||
Sbjct: 52670 cggccgcatcgtcgtccgcaagctcatgctccgtggctacaacgtcaagg 52719
Score = 81.8 bits (41), Expect = 3e-12
Identities = 104/125 (83%)
Strand = Plus / Plus
Query: 260 caggattactacaatgagatggctcagctcagggctggtaaaagcagcaagagcaagctt 319
||||||||||||||| || |||||||| |||||||||||||||||||||||||| ||
Sbjct: 53334 caggattactacaatcagttggctcagtcaagggctggtaaaagcagcaagagcaaactg 53393
Query: 320 ttgatagcaaaatttaaatccgccaagtctctgaagggttgggaggtgaaccagggatct 379
| ||| || || || ||||| ||||| ||||| | || ||||| ||||| ||||||||
Sbjct: 53394 tcgattgccaagttcaaatctgccaaatctcttcaaggatgggaagtgaatcagggatca 53453
Query: 380 tactt 384
|||||
Sbjct: 53454 tactt 53458
Score = 50.1 bits (25), Expect = 0.009
Identities = 67/81 (82%)
Strand = Plus / Plus
Query: 476 tttgtttttacaagaggtgggtatgtcgagatatcaaagaggctctctctccctttaggt 535
|||||||| ||||||||||| ||||| || | || || |||| || ||||| |||||
Sbjct: 53695 tttgttttcacaagaggtggatatgttgaagtgtcgaaacggctttcgctcccactaggt 53754
Query: 536 tccaccctagacaggtatgat 556
|||||||||||||||| ||||
Sbjct: 53755 tccaccctagacaggtgtgat 53775
Score = 46.1 bits (23), Expect = 0.14
Identities = 53/63 (84%)
Strand = Plus / Plus
Query: 406 ttctagtttcgatgaaggtatcgatgcatcctttgaattttcagaaggtggccaggctgt 465
|||||| ||||||||||| | ||||||||| |||||| | || ||| ||| ||||||||
Sbjct: 53474 ttctagattcgatgaaggcaccgatgcatcgtttgaaatatctgaaaatggacaggctgt 53533
Query: 466 ttt 468
|||
Sbjct: 53534 ttt 53536
>dbj|AP005474.3 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
clone:OSJNBa0081C13
Length = 144624
Score = 119 bits (60), Expect = 1e-23
Identities = 155/187 (82%)
Strand = Plus / Plus
Query: 77 gtgatcgacatgcttcccaggtcggtggacatcgctgttggcgatgttggcgatcctctg 136
||||||||||||||||| || || |||||||| | ||||| |||||||||||| ||
Sbjct: 142409 gtgatcgacatgcttccaagatctgtggacattgtggttggtgatgttggcgatgcttct 142468
Query: 137 gctgtgcaatcggccgtgtcaggctgcagcaagattatctattgcgcaaccgcgcgctca 196
| || ||| | |||||||||||||||| |||| | ||||| |||||||| || || |||
Sbjct: 142469 tcagttcaagctgccgtgtcaggctgcaacaaggtaatctactgcgcaactgcacggtca 142528
Query: 197 accattaccggggacctcaacngagttgataaccaaggagtcaggaacgtcagcaaggct 256
|| |||||||| || |||||| |||||||||||||||| || ||||| |||| ||||||
Sbjct: 142529 acgattaccggtgatctcaacagagttgataaccaaggcgtgaggaatgtcaccaaggcc 142588
Query: 257 ttccagg 263
|||||||
Sbjct: 142589 ttccagg 142595
Score = 101 bits (51), Expect = 3e-18
Identities = 75/83 (90%)
Strand = Plus / Plus
Query: 557 ggcttgcttctttcagtgggtggaaatggaagatcatatgttgttattcttgagactggt 616
||||| ||||| || ||||||||||||||||||||||||||| | || ||||||||||||
Sbjct: 143233 ggcttacttctatccgtgggtggaaatggaagatcatatgttatcatccttgagactggt 143292
Query: 617 ccactggctgacacctcgcagag 639
||||| ||||||||||| |||||
Sbjct: 143293 ccactagctgacacctcacagag 143315
Score = 83.8 bits (42), Expect = 6e-13
Identities = 48/50 (96%)
Strand = Plus / Plus
Query: 1 cggccgcatcgtcgtccgcaagctcatgctccgaggctacaatgtcaagg 50
||||||||||||||||||||||||||||||||| |||||||| |||||||
Sbjct: 142023 cggccgcatcgtcgtccgcaagctcatgctccgtggctacaacgtcaagg 142072
Score = 81.8 bits (41), Expect = 3e-12
Identities = 104/125 (83%)
Strand = Plus / Plus
Query: 260 caggattactacaatgagatggctcagctcagggctggtaaaagcagcaagagcaagctt 319
||||||||||||||| || |||||||| |||||||||||||||||||||||||| ||
Sbjct: 142687 caggattactacaatcagttggctcagtcaagggctggtaaaagcagcaagagcaaactg 142746
Query: 320 ttgatagcaaaatttaaatccgccaagtctctgaagggttgggaggtgaaccagggatct 379
| ||| || || || ||||| ||||| ||||| | || ||||| ||||| ||||||||
Sbjct: 142747 tcgattgccaagttcaaatctgccaaatctcttcaaggatgggaagtgaatcagggatca 142806
Query: 380 tactt 384
|||||
Sbjct: 142807 tactt 142811
Score = 50.1 bits (25), Expect = 0.009
Identities = 67/81 (82%)
Strand = Plus / Plus
Query: 476 tttgtttttacaagaggtgggtatgtcgagatatcaaagaggctctctctccctttaggt 535
|||||||| ||||||||||| ||||| || | || || |||| || ||||| |||||
Sbjct: 143048 tttgttttcacaagaggtggatatgttgaagtgtcgaaacggctttcgctcccactaggt 143107
Query: 536 tccaccctagacaggtatgat 556
|||||||||||||||| ||||
Sbjct: 143108 tccaccctagacaggtgtgat 143128
Score = 46.1 bits (23), Expect = 0.14
Identities = 53/63 (84%)
Strand = Plus / Plus
Query: 406 ttctagtttcgatgaaggtatcgatgcatcctttgaattttcagaaggtggccaggctgt 465
|||||| ||||||||||| | ||||||||| |||||| | || ||| ||| ||||||||
Sbjct: 142827 ttctagattcgatgaaggcaccgatgcatcgtttgaaatatctgaaaatggacaggctgt 142886
Query: 466 ttt 468
|||
Sbjct: 142887 ttt 142889
>dbj|AB004329.1 | Rattus norvegicus mRNA for acetyl-CoA carboxylase, complete cds
Length = 7371
Score = 40.1 bits (20), Expect = 8.7
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 278 atggctcagctcagggctgg 297
||||||||||||||||||||
Sbjct: 7050 atggctcagctcagggctgg 7031
Database: nt
Posted date: May 29, 2006 11:10 AM
Number of letters in database: 3,984,495,279
Number of sequences in database: 917,343
Database: /shigen/export/home/twatanab/db/nt/nt.01
Posted date: May 29, 2006 11:16 AM
Number of letters in database: 3,988,174,986
Number of sequences in database: 835,257
Database: /shigen/export/home/twatanab/db/nt/nt.02
Posted date: May 29, 2006 11:21 AM
Number of letters in database: 3,991,246,324
Number of sequences in database: 771,481
Database: /shigen/export/home/twatanab/db/nt/nt.03
Posted date: May 29, 2006 11:27 AM
Number of letters in database: 3,990,718,311
Number of sequences in database: 977,174
Database: /shigen/export/home/twatanab/db/nt/nt.04
Posted date: May 29, 2006 11:29 AM
Number of letters in database: 1,278,410,368
Number of sequences in database: 400,813
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,255,895
Number of Sequences: 3902068
Number of extensions: 6255895
Number of successful extensions: 124927
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 50
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 124641
Number of HSP's gapped (non-prelim): 278
length of query: 639
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 616
effective length of database: 17,143,297,704
effective search space: 10560271385664
effective search space used: 10560271385664
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)