| Clone Name | baal9l08 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | TORC_ECOLI (P33226) Cytochrome c-type protein torC | 28 | 6.2 | 2 | TORC_ECO57 (P58359) Cytochrome c-type protein torC | 28 | 6.2 | 3 | CYC_HELAS (P00032) Cytochrome c | 28 | 8.1 |
|---|
>TORC_ECOLI (P33226) Cytochrome c-type protein torC| Length = 390 Score = 28.1 bits (61), Expect = 6.2 Identities = 14/40 (35%), Positives = 20/40 (50%) Frame = -2 Query: 259 LSLVHLH*SRDVRLXWLPHAGWKKTAWTSGCFQCHACSAI 140 L+LV + + L LPH G K T+ T C CH+ + Sbjct: 18 LALVAIGIVIGIALIVLPHVGIKVTSTTEFCVSCHSMQPV 57
>TORC_ECO57 (P58359) Cytochrome c-type protein torC| Length = 390 Score = 28.1 bits (61), Expect = 6.2 Identities = 14/40 (35%), Positives = 20/40 (50%) Frame = -2 Query: 259 LSLVHLH*SRDVRLXWLPHAGWKKTAWTSGCFQCHACSAI 140 L+LV + + L LPH G K T+ T C CH+ + Sbjct: 18 LALVAIGIVIGIALIVLPHVGIKVTSTTEFCVSCHSMQPV 57
>CYC_HELAS (P00032) Cytochrome c| Length = 104 Score = 27.7 bits (60), Expect = 8.1 Identities = 17/54 (31%), Positives = 22/54 (40%), Gaps = 2/54 (3%) Frame = -2 Query: 190 KTAWTSGCFQCHACSAIGQGRTRTTGLGIF--HGGQRRRAVIN*RQSGKEIFWR 35 K +T C QCH A G+ +T G+F GQ GK I W+ Sbjct: 7 KKIFTQKCLQCHTVEAGGKHKTGPNLSGLFGRKQGQAPGFAYTDANKGKGITWK 60 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 38,352,417 Number of Sequences: 219361 Number of extensions: 710397 Number of successful extensions: 1758 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 1697 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1758 length of database: 80,573,946 effective HSP length: 63 effective length of database: 66,754,203 effective search space used: 1602100872 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)