| Clone Name | baal9k18 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|D13153.1|WHTCYS1 Triticum aestivum mRNA for O-acetylserine (thiol) lyase Length = 1371 Score = 541 bits (273), Expect = e-151 Identities = 328/345 (95%), Gaps = 1/345 (0%) Strand = Plus / Plus Query: 17 gcggccgccacttcgtccacctccagctccgggaggaccgcttcgctgccaaatcgctcg 76 ||||||||||||||||||| ||||||||||||||||| | ||| |||| | ||||||||| Sbjct: 1 gcggccgccacttcgtccagctccagctccgggaggatcacttggctgtcgaatcgctcg 60 Query: 77 tcgggcggcgggatgggggaggcttcgacgccggcgatcgccagggatgtcaccgagctg 136 ||| |||||||||||||||||| || | ||||||||||||| |||||||||||||||| Sbjct: 61 tcga-cggcgggatgggggaggcgtcatctccggcgatcgccaaggatgtcaccgagctg 119 Query: 137 atcgggaacacgccgctggtgtacctcaacaaggtgacggacgggtgcgtggggcgcgtc 196 ||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 120 atcgggaacacgccgttggtgtacctcaacaaggtgaccgacgggtgcgtggggcgcgtc 179 Query: 197 gccgccaagctcgagtccatggagccctgctccagcgtcaaggacaggattgggtacagc 256 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 180 gccgccaagctcgagtccatggagccctgctccagcgtcaaggacaggattggatacagc 239 Query: 257 atgatcaccgacgcagaggagaaggggttcatcgtcccaggcaagagtgtgctgattgag 316 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 240 atgatcaccgacgcggaggagaaggggttcatcgtcccaggcaagagtgtgctgattgag 299 Query: 317 ccaaccagtggcaacacaggcattgggctggccttcatggctgct 361 ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 300 ccaaccagtggcaacacaggcattgggctggccttcatggctgct 344
>gb|BT009041.1| Triticum aestivum clone wdk5c.pk006.c9:fis, full insert mRNA sequence Length = 1355 Score = 527 bits (266), Expect = e-147 Identities = 324/342 (94%), Gaps = 1/342 (0%) Strand = Plus / Plus Query: 20 gccgccacttcgtccacctccagctccgggaggaccgcttcgctgccaaatcgctcgtcg 79 |||||||||||||||| |||| ||||| | |||| | |||||||| |||||||||||||| Sbjct: 7 gccgccacttcgtccagctccggctccagaaggatcacttcgctgtcaaatcgctcgtcg 66 Query: 80 ggcggcgggatgggggaggcttcgacgccggcgatcgccagggatgtcaccgagctgatc 139 |||||||||||||||||| || | ||||||||||||| ||||||||||||||||||| Sbjct: 67 a-cggcgggatgggggaggcgtcatctccggcgatcgccaaggatgtcaccgagctgatc 125 Query: 140 gggaacacgccgctggtgtacctcaacaaggtgacggacgggtgcgtggggcgcgtcgcc 199 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 126 gggaacacgccgctggtgtacctcaacaaggtgaccgacgggtgcgtggggcgcgtcgcc 185 Query: 200 gccaagctcgagtccatggagccctgctccagcgtcaaggacaggattgggtacagcatg 259 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 186 gccaagctcgagtccatggagccctgctccagcgtcaaggacaggattggatacagcatg 245 Query: 260 atcaccgacgcagaggagaaggggttcatcgtcccaggcaagagtgtgctgattgagcca 319 ||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 246 atcaccgacgcggaggagaaggggttcatcgtcccaggcaagagtgtcctgattgagcca 305 Query: 320 accagtggcaacacaggcattgggctggccttcatggctgct 361 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 306 accagtggcaacacaggcattgggctggccttcatggctgct 347
>emb|AJ622893.1| Triticum durum partial mRNA for DRP6 protein (drg6 gene) Length = 466 Score = 379 bits (191), Expect = e-102 Identities = 200/203 (98%) Strand = Plus / Minus Query: 159 acctcaacaaggtgacggacgggtgcgtggggcgcgtcgccgccaagctcgagtccatgg 218 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 466 acctcaacaaggtgaccgacgggtgcgtggggcgcgtcgccgccaagctcgagtccatgg 407 Query: 219 agccctgctccagcgtcaaggacaggattgggtacagcatgatcaccgacgcagaggaga 278 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 406 agccctgctccagcgtcaaggacaggattgggtacagcatgatcaccgacgcggaggaga 347 Query: 279 aggggttcatcgtcccaggcaagagtgtgctgattgagccaaccagtggcaacacaggca 338 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 346 agaggttcatcgtcccaggcaagagtgtgctgattgagccaaccagtggcaacacaggca 287 Query: 339 ttgggctggccttcatggctgct 361 ||||||||||||||||||||||| Sbjct: 286 ttgggctggccttcatggctgct 264
>dbj|AK099598.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013045K17, full insert sequence Length = 1281 Score = 319 bits (161), Expect = 3e-84 Identities = 227/249 (91%) Strand = Plus / Plus Query: 113 atcgccagggatgtcaccgagctgatcgggaacacgccgctggtgtacctcaacaaggtg 172 ||||||| ||||||||||||| |||| |||||||||||| |||||||||||||| |||| Sbjct: 92 atcgccaaggatgtcaccgagttgattgggaacacgccgttggtgtacctcaaccgggtg 151 Query: 173 acggacgggtgcgtggggcgcgtcgccgccaagctcgagtccatggagccctgctccagc 232 ||||| |||||||| ||||||||||| ||||||||||||||||||||||| ||||||||| Sbjct: 152 acggatgggtgcgtcgggcgcgtcgcggccaagctcgagtccatggagccatgctccagc 211 Query: 233 gtcaaggacaggattgggtacagcatgatcaccgacgcagaggagaaggggttcatcgtc 292 |||||||| |||||||| ||||| |||||||| || ||||||||||||||| | ||| Sbjct: 212 gtcaaggataggattggatacagtatgatcactgatgcagaggagaaggggctgatcact 271 Query: 293 ccaggcaagagtgtgctgattgagccaaccagtggcaacacaggcattgggctggccttc 352 ||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||| Sbjct: 272 ccaggcaagagtgtgctgattgagccaactagtggcaacacaggcattggactggccttc 331 Query: 353 atggctgct 361 ||||||||| Sbjct: 332 atggctgct 340
>dbj|AK061993.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-043-C03, full insert sequence Length = 1280 Score = 319 bits (161), Expect = 3e-84 Identities = 227/249 (91%) Strand = Plus / Plus Query: 113 atcgccagggatgtcaccgagctgatcgggaacacgccgctggtgtacctcaacaaggtg 172 ||||||| ||||||||||||| |||| |||||||||||| |||||||||||||| |||| Sbjct: 91 atcgccaaggatgtcaccgagttgattgggaacacgccgttggtgtacctcaaccgggtg 150 Query: 173 acggacgggtgcgtggggcgcgtcgccgccaagctcgagtccatggagccctgctccagc 232 ||||| |||||||| ||||||||||| ||||||||||||||||||||||| ||||||||| Sbjct: 151 acggatgggtgcgtcgggcgcgtcgcggccaagctcgagtccatggagccatgctccagc 210 Query: 233 gtcaaggacaggattgggtacagcatgatcaccgacgcagaggagaaggggttcatcgtc 292 |||||||| |||||||| ||||| |||||||| || ||||||||||||||| | ||| Sbjct: 211 gtcaaggataggattggatacagtatgatcactgatgcagaggagaaggggctgatcact 270 Query: 293 ccaggcaagagtgtgctgattgagccaaccagtggcaacacaggcattgggctggccttc 352 ||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||| Sbjct: 271 ccaggcaagagtgtgctgattgagccaactagtggcaacacaggcattggactggccttc 330 Query: 353 atggctgct 361 ||||||||| Sbjct: 331 atggctgct 339
>gb|AF073695.1|AF073695 Oryza sativa cysteine synthase (rcs1) mRNA, complete cds Length = 1290 Score = 319 bits (161), Expect = 3e-84 Identities = 227/249 (91%) Strand = Plus / Plus Query: 113 atcgccagggatgtcaccgagctgatcgggaacacgccgctggtgtacctcaacaaggtg 172 ||||||| ||||||||||||| |||| |||||||||||| |||||||||||||| |||| Sbjct: 86 atcgccaaggatgtcaccgagttgattgggaacacgccgttggtgtacctcaaccgggtg 145 Query: 173 acggacgggtgcgtggggcgcgtcgccgccaagctcgagtccatggagccctgctccagc 232 ||||| |||||||| ||||||||||| ||||||||||||||||||||||| ||||||||| Sbjct: 146 acggatgggtgcgtcgggcgcgtcgcggccaagctcgagtccatggagccatgctccagc 205 Query: 233 gtcaaggacaggattgggtacagcatgatcaccgacgcagaggagaaggggttcatcgtc 292 |||||||| |||||||| ||||| |||||||| || ||||||||||||||| | ||| Sbjct: 206 gtcaaggataggattggatacagtatgatcactgatgcagaggagaaggggctgatcact 265 Query: 293 ccaggcaagagtgtgctgattgagccaaccagtggcaacacaggcattgggctggccttc 352 ||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||| Sbjct: 266 ccaggcaagagtgtgctgattgagccaactagtggcaacacaggcattggactggccttc 325 Query: 353 atggctgct 361 ||||||||| Sbjct: 326 atggctgct 334
>gb|AY103651.1| Zea mays PCO145346 mRNA sequence Length = 1483 Score = 303 bits (153), Expect = 2e-79 Identities = 231/257 (89%) Strand = Plus / Plus Query: 105 cgccggcgatcgccagggatgtcaccgagctgatcgggaacacgccgctggtgtacctca 164 ||||| ||||||||| ||| ||||||||| |||||||||||||||||||||||||||||| Sbjct: 234 cgccgtcgatcgccaaggacgtcaccgagttgatcgggaacacgccgctggtgtacctca 293 Query: 165 acaaggtgacggacgggtgcgtggggcgcgtcgccgccaagctcgagtccatggagccct 224 |||||||||| || |||||||| || |||||||||||||||||||||||||||||||||| Sbjct: 294 acaaggtgaccgatgggtgcgtcggccgcgtcgccgccaagctcgagtccatggagccct 353 Query: 225 gctccagcgtcaaggacaggattgggtacagcatgatcaccgacgcagaggagaaggggt 284 |||||||||||||||| |||||||| |||||||||||||| |||||||||||||| ||| Sbjct: 354 gctccagcgtcaaggataggattggctacagcatgatcacggacgcagaggagaaagggc 413 Query: 285 tcatcgtcccaggcaagagtgtgctgattgagccaaccagtggcaacacaggcattgggc 344 | || |||||| |||||| |||||||| ||||| || ||||||||||||||||| | Sbjct: 414 tgattactccaggcgtgagtgttctgattgaaccaactagcggcaacacaggcattggac 473 Query: 345 tggccttcatggctgct 361 ||||||| ||||||||| Sbjct: 474 tggcctttatggctgct 490
>gb|BT016496.1| Zea mays clone Contig329 mRNA sequence Length = 1500 Score = 295 bits (149), Expect = 5e-77 Identities = 230/257 (89%) Strand = Plus / Plus Query: 105 cgccggcgatcgccagggatgtcaccgagctgatcgggaacacgccgctggtgtacctca 164 ||||| ||||||||| ||| ||||||||| |||||||||| ||||||||||||||||||| Sbjct: 231 cgccgtcgatcgccaaggacgtcaccgagttgatcgggaatacgccgctggtgtacctca 290 Query: 165 acaaggtgacggacgggtgcgtggggcgcgtcgccgccaagctcgagtccatggagccct 224 |||||||||| || |||||||| || |||||||||||||||||||||||||||||||||| Sbjct: 291 acaaggtgaccgatgggtgcgtcggccgcgtcgccgccaagctcgagtccatggagccct 350 Query: 225 gctccagcgtcaaggacaggattgggtacagcatgatcaccgacgcagaggagaaggggt 284 |||||||||||||||| |||||||| |||||||||||||| |||||||||||||| ||| Sbjct: 351 gctccagcgtcaaggataggattggctacagcatgatcacggacgcagaggagaaagggc 410 Query: 285 tcatcgtcccaggcaagagtgtgctgattgagccaaccagtggcaacacaggcattgggc 344 | || |||||| |||||| |||||||| ||||| || ||||||||||||||||| | Sbjct: 411 tgattactccaggcgtgagtgttctgattgaaccaactagcggcaacacaggcattggac 470 Query: 345 tggccttcatggctgct 361 ||||||| ||||||||| Sbjct: 471 tggcctttatggctgct 487
>emb|X85803.1|ZMCSOATL Z.mays mRNA for cysteine synthase Length = 1319 Score = 274 bits (138), Expect = 2e-70 Identities = 230/258 (89%), Gaps = 2/258 (0%) Strand = Plus / Plus Query: 105 cgccggcgatcgccagggatgtcaccgagctgatcgggaacacgccgctggtgtacctca 164 ||||| ||||||||| ||| ||||||||| |||||||||||||||||||||||||||||| Sbjct: 86 cgccgtcgatcgccaaggacgtcaccgagttgatcgggaacacgccgctggtgtacctca 145 Query: 165 acaaggtgacggacgggtgcgtggggcgc-gtcgccgccaagctcgagtccatggagccc 223 |||||||||| || |||||||| || ||| ||||| |||||||||||||||||||||||| Sbjct: 146 acaaggtgaccgatgggtgcgtcggccgcagtcgc-gccaagctcgagtccatggagccc 204 Query: 224 tgctccagcgtcaaggacaggattgggtacagcatgatcaccgacgcagaggagaagggg 283 ||||||||||||||||| |||||||| |||||||||||||| |||||||||||||| ||| Sbjct: 205 tgctccagcgtcaaggataggattggctacagcatgatcacggacgcagaggagaaaggg 264 Query: 284 ttcatcgtcccaggcaagagtgtgctgattgagccaaccagtggcaacacaggcattggg 343 | || |||||| |||||| |||||||| ||||| || ||||||||||||||||| Sbjct: 265 ctgattactccaggcgtgagtgttctgattgaaccaactagcggcaacacaggcattgga 324 Query: 344 ctggccttcatggctgct 361 |||||||| ||||||||| Sbjct: 325 ctggcctttatggctgct 342
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 147 bits (74), Expect = 3e-32 Identities = 98/106 (92%) Strand = Plus / Minus Query: 135 tgatcgggaacacgccgctggtgtacctcaacaaggtgacggacgggtgcgtggggcgcg 194 |||| |||||||||||| |||||||||||||| ||||||||| |||||||| ||||||| Sbjct: 26736261 tgattgggaacacgccgttggtgtacctcaaccgggtgacggatgggtgcgtcgggcgcg 26736202 Query: 195 tcgccgccaagctcgagtccatggagccctgctccagcgtcaagga 240 |||| ||||||||||||||||||||||| ||||||||||||||||| Sbjct: 26736201 tcgcggccaagctcgagtccatggagccatgctccagcgtcaagga 26736156 Score = 107 bits (54), Expect = 2e-20 Identities = 60/62 (96%) Strand = Plus / Minus Query: 300 agagtgtgctgattgagccaaccagtggcaacacaggcattgggctggccttcatggctg 359 |||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||| Sbjct: 26734468 agagtgtgctgattgagccaactagtggcaacacaggcattggactggccttcatggctg 26734409 Query: 360 ct 361 || Sbjct: 26734408 ct 26734407 Score = 56.0 bits (28), Expect = 8e-05 Identities = 40/44 (90%) Strand = Plus / Minus Query: 240 acaggattgggtacagcatgatcaccgacgcagaggagaagggg 283 |||||||||| ||||| |||||||| || ||||||||||||||| Sbjct: 26735956 acaggattggatacagtatgatcactgatgcagaggagaagggg 26735913
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 147 bits (74), Expect = 3e-32 Identities = 98/106 (92%) Strand = Plus / Minus Query: 135 tgatcgggaacacgccgctggtgtacctcaacaaggtgacggacgggtgcgtggggcgcg 194 |||| |||||||||||| |||||||||||||| ||||||||| |||||||| ||||||| Sbjct: 26664431 tgattgggaacacgccgttggtgtacctcaaccgggtgacggatgggtgcgtcgggcgcg 26664372 Query: 195 tcgccgccaagctcgagtccatggagccctgctccagcgtcaagga 240 |||| ||||||||||||||||||||||| ||||||||||||||||| Sbjct: 26664371 tcgcggccaagctcgagtccatggagccatgctccagcgtcaagga 26664326 Score = 107 bits (54), Expect = 2e-20 Identities = 60/62 (96%) Strand = Plus / Minus Query: 300 agagtgtgctgattgagccaaccagtggcaacacaggcattgggctggccttcatggctg 359 |||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||| Sbjct: 26662638 agagtgtgctgattgagccaactagtggcaacacaggcattggactggccttcatggctg 26662579 Query: 360 ct 361 || Sbjct: 26662578 ct 26662577 Score = 56.0 bits (28), Expect = 8e-05 Identities = 40/44 (90%) Strand = Plus / Minus Query: 240 acaggattgggtacagcatgatcaccgacgcagaggagaagggg 283 |||||||||| ||||| |||||||| || ||||||||||||||| Sbjct: 26664126 acaggattggatacagtatgatcactgatgcagaggagaagggg 26664083
>emb|AL731889.5|CNS08C8T Oryza sativa chromosome 12, . BAC OJ1122_G07 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 83015 Score = 147 bits (74), Expect = 3e-32 Identities = 98/106 (92%) Strand = Plus / Plus Query: 135 tgatcgggaacacgccgctggtgtacctcaacaaggtgacggacgggtgcgtggggcgcg 194 |||| |||||||||||| |||||||||||||| ||||||||| |||||||| ||||||| Sbjct: 34863 tgattgggaacacgccgttggtgtacctcaaccgggtgacggatgggtgcgtcgggcgcg 34922 Query: 195 tcgccgccaagctcgagtccatggagccctgctccagcgtcaagga 240 |||| ||||||||||||||||||||||| ||||||||||||||||| Sbjct: 34923 tcgcggccaagctcgagtccatggagccatgctccagcgtcaagga 34968 Score = 107 bits (54), Expect = 2e-20 Identities = 60/62 (96%) Strand = Plus / Plus Query: 300 agagtgtgctgattgagccaaccagtggcaacacaggcattgggctggccttcatggctg 359 |||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||| Sbjct: 36656 agagtgtgctgattgagccaactagtggcaacacaggcattggactggccttcatggctg 36715 Query: 360 ct 361 || Sbjct: 36716 ct 36717 Score = 56.0 bits (28), Expect = 8e-05 Identities = 40/44 (90%) Strand = Plus / Plus Query: 240 acaggattgggtacagcatgatcaccgacgcagaggagaagggg 283 |||||||||| ||||| |||||||| || ||||||||||||||| Sbjct: 35168 acaggattggatacagtatgatcactgatgcagaggagaagggg 35211
>emb|BX000561.2|CNS08CE7 Oryza sativa chromosome 12, . BAC OJ1014_F06 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 104849 Score = 147 bits (74), Expect = 3e-32 Identities = 98/106 (92%) Strand = Plus / Plus Query: 135 tgatcgggaacacgccgctggtgtacctcaacaaggtgacggacgggtgcgtggggcgcg 194 |||| |||||||||||| |||||||||||||| ||||||||| |||||||| ||||||| Sbjct: 62717 tgattgggaacacgccgttggtgtacctcaaccgggtgacggatgggtgcgtcgggcgcg 62776 Query: 195 tcgccgccaagctcgagtccatggagccctgctccagcgtcaagga 240 |||| ||||||||||||||||||||||| ||||||||||||||||| Sbjct: 62777 tcgcggccaagctcgagtccatggagccatgctccagcgtcaagga 62822 Score = 107 bits (54), Expect = 2e-20 Identities = 60/62 (96%) Strand = Plus / Plus Query: 300 agagtgtgctgattgagccaaccagtggcaacacaggcattgggctggccttcatggctg 359 |||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||| Sbjct: 64510 agagtgtgctgattgagccaactagtggcaacacaggcattggactggccttcatggctg 64569 Query: 360 ct 361 || Sbjct: 64570 ct 64571 Score = 56.0 bits (28), Expect = 8e-05 Identities = 40/44 (90%) Strand = Plus / Plus Query: 240 acaggattgggtacagcatgatcaccgacgcagaggagaagggg 283 |||||||||| ||||| |||||||| || ||||||||||||||| Sbjct: 63022 acaggattggatacagtatgatcactgatgcagaggagaagggg 63065
>ref|XM_469737.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1343 Score = 93.7 bits (47), Expect = 4e-16 Identities = 137/167 (82%) Strand = Plus / Plus Query: 195 tcgccgccaagctcgagtccatggagccctgctccagcgtcaaggacaggattgggtaca 254 |||| |||||||| ||| |||||||||||||||||| |||||||| |||||||| || | Sbjct: 228 tcgctgccaagcttgagatcatggagccctgctccagtgtcaaggataggattggttata 287 Query: 255 gcatgatcaccgacgcagaggagaaggggttcatcgtcccaggcaagagtgtgctgattg 314 ||||||| || || ||||| |||||||| |||| ||||| |||||||| |||||| Sbjct: 288 gcatgattacagatgcagaagagaagggtctcattactccaggaaagagtgttttgattg 347 Query: 315 agccaaccagtggcaacacaggcattgggctggccttcatggctgct 361 |||| || ||||| || || || ||||| || || |||||||||||| Sbjct: 348 agcctactagtggaaatactggtattggccttgctttcatggctgct 394
>gb|AF073697.1|AF073697 Oryza sativa cysteine synthase (rcs3) mRNA, complete cds Length = 1363 Score = 93.7 bits (47), Expect = 4e-16 Identities = 137/167 (82%) Strand = Plus / Plus Query: 195 tcgccgccaagctcgagtccatggagccctgctccagcgtcaaggacaggattgggtaca 254 |||| |||||||| ||| |||||||||||||||||| |||||||| |||||||| || | Sbjct: 242 tcgctgccaagcttgagatcatggagccctgctccagtgtcaaggataggattggttata 301 Query: 255 gcatgatcaccgacgcagaggagaaggggttcatcgtcccaggcaagagtgtgctgattg 314 ||||||| || || ||||| |||||||| |||| ||||| |||||||| |||||| Sbjct: 302 gcatgattacagatgcagaagagaagggtctcattactccaggaaagagtgttttgattg 361 Query: 315 agccaaccagtggcaacacaggcattgggctggccttcatggctgct 361 |||| || ||||| || || || ||||| || || |||||||||||| Sbjct: 362 agcctactagtggaaatactggtattggccttgctttcatggctgct 408
>dbj|AK071279.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023084C02, full insert sequence Length = 1337 Score = 85.7 bits (43), Expect = 9e-14 Identities = 136/167 (81%) Strand = Plus / Plus Query: 195 tcgccgccaagctcgagtccatggagccctgctccagcgtcaaggacaggattgggtaca 254 |||| |||||||| ||| |||||||||||||||||| |||||||| |||||||| || | Sbjct: 217 tcgctgccaagcttgagatcatggagccctgctccagtgtcaaggataggattggttata 276 Query: 255 gcatgatcaccgacgcagaggagaaggggttcatcgtcccaggcaagagtgtgctgattg 314 ||||||| || || ||||| |||||||| |||| ||||| |||||||| |||| | Sbjct: 277 gcatgattacagatgcagaagagaagggtctcattactccaggaaagagtgttttgatcg 336 Query: 315 agccaaccagtggcaacacaggcattgggctggccttcatggctgct 361 |||| || ||||| || || || ||||| || || |||||||||||| Sbjct: 337 agcctactagtggaaatactggtattggccttgctttcatggctgct 383
>gb|AY353092.1| Populus x canescens O-acetylserine (thiol)lyase mRNA, partial cds Length = 1192 Score = 81.8 bits (41), Expect = 1e-12 Identities = 104/125 (83%) Strand = Plus / Plus Query: 233 gtcaaggacaggattgggtacagcatgatcaccgacgcagaggagaaggggttcatcgtc 292 ||||| |||||||||||||| || |||||||| || ||||||||||||||| | ||| Sbjct: 43 gtcaaagacaggattgggtatagtatgatcacagatgcagaggagaaggggcttatcaag 102 Query: 293 ccaggcaagagtgtgctgattgagccaaccagtggcaacacaggcattgggctggccttc 352 | || ||||||| ||||||||||| || |||||||| || ||||| |||||||| ||| Sbjct: 103 gcgggtgagagtgtcctgattgagcctacgagtggcaatactggcatagggctggcattc 162 Query: 353 atggc 357 ||||| Sbjct: 163 atggc 167
>gb|DQ336288.1| Vitis pseudoreticulata cysteine synthase mRNA, complete cds Length = 756 Score = 71.9 bits (36), Expect = 1e-09 Identities = 60/68 (88%) Strand = Plus / Plus Query: 215 atggagccctgctccagcgtcaaggacaggattgggtacagcatgatcaccgacgcagag 274 |||||||| ||||| || |||||||||||||| |||||||| |||||||| || ||||| Sbjct: 124 atggagccttgctctagtgtcaaggacaggatcgggtacagtatgatcacagatgcagaa 183 Query: 275 gagaaggg 282 |||||||| Sbjct: 184 gagaaggg 191
>gb|AY112530.1| Zea mays CL5251_1 mRNA sequence Length = 1258 Score = 65.9 bits (33), Expect = 8e-08 Identities = 66/77 (85%) Strand = Plus / Plus Query: 194 gtcgccgccaagctcgagtccatggagccctgctccagcgtcaaggacaggattgggtac 253 ||||| || ||||||||| ||||||||||||| ||||||||||||||||| |||||| Sbjct: 88 gtcgctgctaagctcgagattatggagccctgctgtagcgtcaaggacaggatagggtac 147 Query: 254 agcatgatcaccgacgc 270 || ||||| | |||||| Sbjct: 148 agtatgataaacgacgc 164
>emb|Y10845.1|BJY10845 Brassica juncea mRNA for O-acetylserine(thiol) lyase, clone OAS-TL4 Length = 1280 Score = 63.9 bits (32), Expect = 3e-07 Identities = 113/140 (80%) Strand = Plus / Plus Query: 194 gtcgccgccaagctcgagtccatggagccctgctccagcgtcaaggacaggattgggtac 253 ||||| || ||||||||| ||||| || |||||||| ||||| ||||||||||| | Sbjct: 167 gtcgctgctaagctcgagatgatggaaccttgctccagtgtcaaagacaggattggtttt 226 Query: 254 agcatgatcaccgacgcagaggagaaggggttcatcgtcccaggcaagagtgtgctgatt 313 ||||||||| | || |||||| | ||||| | ||| ||||| |||||||||||||| Sbjct: 227 agcatgatctctgatgcagagcaaaagggtctgatcaaaccaggagagagtgtgctgatt 286 Query: 314 gagccaaccagtggcaacac 333 |||||||| ||||| ||||| Sbjct: 287 gagccaacgagtggaaacac 306
>gb|AF078693.1|AF078693 Chlamydomonas reinhardtii putative O-acetylserine(thiol)lyase precursor (Crcys-1A) mRNA, nuclear gene encoding organellar protein, complete cds Length = 1492 Score = 63.9 bits (32), Expect = 3e-07 Identities = 59/68 (86%) Strand = Plus / Plus Query: 195 tcgccgccaagctcgagtccatggagccctgctccagcgtcaaggacaggattgggtaca 254 ||||||||||||| ||| |||||||||||||| | ||| ||||||||||| || |||| Sbjct: 251 tcgccgccaagctggagatcatggagccctgctgctccgttaaggacaggatcggctaca 310 Query: 255 gcatgatc 262 |||||||| Sbjct: 311 gcatgatc 318 Score = 40.1 bits (20), Expect = 4.8 Identities = 50/60 (83%) Strand = Plus / Plus Query: 113 atcgccagggatgtcaccgagctgatcgggaacacgccgctggtgtacctcaacaaggtg 172 ||||||| ||||||||||||||||| || || || || |||| ||||| ||||||||| Sbjct: 169 atcgccaccgatgtcaccgagctgattggcaagacccctatggtctacctgaacaaggtg 228
>emb|Y10847.1|BJY10847 Brassica juncea mRNA for O-acetylserine(thiol) lyase, clone OAS-TL6 Length = 1238 Score = 61.9 bits (31), Expect = 1e-06 Identities = 97/119 (81%) Strand = Plus / Plus Query: 215 atggagccctgctccagcgtcaaggacaggattgggtacagcatgatcaccgacgcagag 274 ||||| ||||||||||||||||| ||||||||||| | ||||||||| | || |||||| Sbjct: 138 atggaaccctgctccagcgtcaaagacaggattggttttagcatgatctctgatgcagag 197 Query: 275 gagaaggggttcatcgtcccaggcaagagtgtgctgattgagccaaccagtggcaacac 333 | ||||| | || ||||| |||||||| ||||||||||||| ||||| ||||| Sbjct: 198 aaaaagggtctgattaaaccaggagagagtgtgttgattgagccaacgagtggaaacac 256
>gb|AF452451.1| Glycine max cysteine synthase mRNA, complete cds Length = 1267 Score = 61.9 bits (31), Expect = 1e-06 Identities = 115/143 (80%) Strand = Plus / Plus Query: 215 atggagccctgctccagcgtcaaggacaggattgggtacagcatgatcaccgacgcagag 274 |||||||| ||||| || || ||||||||||||||||| || ||||| | || ||||| Sbjct: 205 atggagccatgctctagtgtgaaggacaggattgggtatagtatgattgctgatgcagaa 264 Query: 275 gagaaggggttcatcgtcccaggcaagagtgtgctgattgagccaaccagtggcaacaca 334 |||||||| | ||| || || |||||||| || ||||||||||| ||||| || || Sbjct: 265 gagaagggacttatcacacctggaaagagtgtcctcattgagccaacaagtggtaatact 324 Query: 335 ggcattgggctggccttcatggc 357 |||||||| | ||||||||||| Sbjct: 325 ggcattggattagccttcatggc 347
>emb|BX827385.1|CNS0A2GK Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS48ZF11 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1229 Score = 61.9 bits (31), Expect = 1e-06 Identities = 97/119 (81%) Strand = Plus / Plus Query: 215 atggagccctgctccagcgtcaaggacaggattgggtacagcatgatcaccgacgcagag 274 ||||| || ||||| |||||||| ||||||||||| | |||||||| | || ||||| Sbjct: 179 atggaaccgtgctctagcgtcaaagacaggattggttttagcatgatttctgatgcagaa 238 Query: 275 gagaaggggttcatcgtcccaggcaagagtgtgctgattgagccaaccagtggcaacac 333 |||||||| | ||| ||||| |||||||||||||||||||||| ||||| ||||| Sbjct: 239 gagaagggtcttatcaaaccaggagagagtgtgctgattgagccaacaagtggaaacac 297
>gb|BT014392.1| Lycopersicon esculentum clone 133697R, mRNA sequence Length = 1384 Score = 60.0 bits (30), Expect = 5e-06 Identities = 45/50 (90%) Strand = Plus / Plus Query: 312 ttgagccaaccagtggcaacacaggcattgggctggccttcatggctgct 361 ||||||| || ||||| ||||||||||||||||| |||||||| |||||| Sbjct: 432 ttgagcctacgagtggaaacacaggcattgggcttgccttcattgctgct 481
>dbj|AB029513.2| Solanum tuberosum PCS-2-2 mRNA for plastidic cysteine synthase 2, complete cds Length = 1375 Score = 60.0 bits (30), Expect = 5e-06 Identities = 45/50 (90%) Strand = Plus / Plus Query: 312 ttgagccaaccagtggcaacacaggcattgggctggccttcatggctgct 361 ||||||| || ||||| ||||||||||||||||| |||||||| |||||| Sbjct: 458 ttgagcctacaagtggaaacacaggcattgggcttgccttcattgctgct 507
>dbj|AB029512.2| Solanum tuberosum PCS-2-1 mRNA for plastidic cysteine synthase 1, complete cds Length = 1378 Score = 60.0 bits (30), Expect = 5e-06 Identities = 45/50 (90%) Strand = Plus / Plus Query: 312 ttgagccaaccagtggcaacacaggcattgggctggccttcatggctgct 361 ||||||| || ||||| ||||||||||||||||| |||||||| |||||| Sbjct: 458 ttgagcctacaagtggaaacacaggcattgggcttgccttcattgctgct 507
>gb|AF044173.1|AF044173 Solanum tuberosum cysteine synthase mRNA, nuclear gene encoding plastid protein, complete cds Length = 1404 Score = 60.0 bits (30), Expect = 5e-06 Identities = 45/50 (90%) Strand = Plus / Plus Query: 312 ttgagccaaccagtggcaacacaggcattgggctggccttcatggctgct 361 ||||||| || ||||| ||||||||||||||||| |||||||| |||||| Sbjct: 424 ttgagcctacaagtggaaacacaggcattgggcttgccttcattgctgct 473
>gb|AY107771.1| Zea mays PCO121395 mRNA sequence Length = 1573 Score = 56.0 bits (28), Expect = 8e-05 Identities = 91/112 (81%) Strand = Plus / Plus Query: 132 agctgatcgggaacacgccgctggtgtacctcaacaaggtgacggacgggtgcgtggggc 191 |||||||||||| || ||| |||||||||| ||||||||||| || ||||||| | | Sbjct: 374 agctgatcgggaggaccccgatggtgtacctgaacaaggtgaccgaggggtgcggcgccc 433 Query: 192 gcgtcgccgccaagctcgagtccatggagccctgctccagcgtcaaggacag 243 | || || ||||||||||||| | || |||| | || ||||||||| ||||| Sbjct: 434 gggtggctgccaagctcgagttcctgcagccgtccttcagcgtcaaagacag 485
>dbj|AB040503.1| Allium tuberosum Bsas1 mRNA for cysteine synthase, complete cds Length = 1671 Score = 56.0 bits (28), Expect = 8e-05 Identities = 52/60 (86%) Strand = Plus / Plus Query: 215 atggagccctgctccagcgtcaaggacaggattgggtacagcatgatcaccgacgcagag 274 |||||||| || || || || |||||||||||||||||||||||||| || || |||||| Sbjct: 540 atggagccttgttctagtgttaaggacaggattgggtacagcatgattactgaggcagag 599
>ref|NM_117574.2| Arabidopsis thaliana OASA1 AT4G14880 (OASA1) transcript variant AT4G14880.1 mRNA, complete cds Length = 1365 Score = 54.0 bits (27), Expect = 3e-04 Identities = 96/119 (80%) Strand = Plus / Plus Query: 215 atggagccctgctccagcgtcaaggacaggattgggtacagcatgatcaccgacgcagag 274 ||||| || ||||| |||||||| ||||||||||| | |||||||| | || ||||| Sbjct: 266 atggaaccgtgctctagcgtcaaagacaggattggttttagcatgatttctgatgcagaa 325 Query: 275 gagaaggggttcatcgtcccaggcaagagtgtgctgattgagccaaccagtggcaacac 333 ||||||| | ||| ||||| |||||||||||||||||||||| ||||| ||||| Sbjct: 326 aagaagggtcttatcaaaccaggagagagtgtgctgattgagccaacaagtggaaacac 384
>ref|NM_179055.2| Arabidopsis thaliana OASA1 AT4G14880 (OASA1) transcript variant AT4G14880.2 mRNA, complete cds Length = 1314 Score = 54.0 bits (27), Expect = 3e-04 Identities = 96/119 (80%) Strand = Plus / Plus Query: 215 atggagccctgctccagcgtcaaggacaggattgggtacagcatgatcaccgacgcagag 274 ||||| || ||||| |||||||| ||||||||||| | |||||||| | || ||||| Sbjct: 211 atggaaccgtgctctagcgtcaaagacaggattggttttagcatgatttctgatgcagaa 270 Query: 275 gagaaggggttcatcgtcccaggcaagagtgtgctgattgagccaaccagtggcaacac 333 ||||||| | ||| ||||| |||||||||||||||||||||| ||||| ||||| Sbjct: 271 aagaagggtcttatcaaaccaggagagagtgtgctgattgagccaacaagtggaaacac 329
>emb|AM087457.1| Nicotiana tabacum partial mRNA for putative chloroplast cysteine synthase 1 precursor (oas1 gene) Length = 1271 Score = 54.0 bits (27), Expect = 3e-04 Identities = 117/147 (79%) Strand = Plus / Plus Query: 215 atggagccctgctccagcgtcaaggacaggattgggtacagcatgatcaccgacgcagag 274 |||||||| |||| ||| |||||||||||||| |||| ||| ||||| | || || ||| Sbjct: 241 atggagccatgctgcagtgtcaaggacaggatagggttcagtatgatatctgatgctgag 300 Query: 275 gagaaggggttcatcgtcccaggcaagagtgtgctgattgagccaaccagtggcaacaca 334 || ||||| | || ||||| |||| ||| ||| | || || || ||||| |||||| Sbjct: 301 gaaaagggacttatatctccagggaagactgttctggtggaacctacgagtggaaacaca 360 Query: 335 ggcattgggctggccttcatggctgct 361 ||||||||||| |||||||| |||||| Sbjct: 361 ggcattgggcttgccttcattgctgct 387
>emb|X84097.1|ATCYS3A A.thaliana mRNA for cysteine synthase Length = 1332 Score = 54.0 bits (27), Expect = 3e-04 Identities = 96/119 (80%) Strand = Plus / Plus Query: 215 atggagccctgctccagcgtcaaggacaggattgggtacagcatgatcaccgacgcagag 274 ||||| || ||||| |||||||| ||||||||||| | |||||||| | || ||||| Sbjct: 213 atggaaccgtgctctagcgtcaaagacaggattggttttagcatgatttctgatgcagaa 272 Query: 275 gagaaggggttcatcgtcccaggcaagagtgtgctgattgagccaaccagtggcaacac 333 ||||||| | ||| ||||| |||||||||||||||||||||| ||||| ||||| Sbjct: 273 aagaagggtcttatcaaaccaggagagagtgtgctgattgagccaacaagtggaaacac 331
>emb|X80376.2|ATOACLY Arabidopsis thaliana mRNA for O-acetylserine lyase (At.OAS.5-8) Length = 1253 Score = 54.0 bits (27), Expect = 3e-04 Identities = 96/119 (80%) Strand = Plus / Plus Query: 215 atggagccctgctccagcgtcaaggacaggattgggtacagcatgatcaccgacgcagag 274 ||||| || ||||| |||||||| ||||||||||| | |||||||| | || ||||| Sbjct: 176 atggaaccgtgctctagcgtcaaagacaggattggttttagcatgatttctgatgcagaa 235 Query: 275 gagaaggggttcatcgtcccaggcaagagtgtgctgattgagccaaccagtggcaacac 333 ||||||| | ||| ||||| |||||||||||||||||||||| ||||| ||||| Sbjct: 236 aagaagggtcttatcaaaccaggagagagtgtgctgattgagccaacaagtggaaacac 294
>gb|AY045825.1| Arabidopsis thaliana putative cytosolic O-acetylserine(thiol)lyase (At4g14880) mRNA, complete cds Length = 1254 Score = 54.0 bits (27), Expect = 3e-04 Identities = 96/119 (80%) Strand = Plus / Plus Query: 215 atggagccctgctccagcgtcaaggacaggattgggtacagcatgatcaccgacgcagag 274 ||||| || ||||| |||||||| ||||||||||| | |||||||| | || ||||| Sbjct: 189 atggaaccgtgctctagcgtcaaagacaggattggttttagcatgatttctgatgcagaa 248 Query: 275 gagaaggggttcatcgtcccaggcaagagtgtgctgattgagccaaccagtggcaacac 333 ||||||| | ||| ||||| |||||||||||||||||||||| ||||| ||||| Sbjct: 249 aagaagggtcttatcaaaccaggagagagtgtgctgattgagccaacaagtggaaacac 307
>emb|AJ580401.1|AHA580401 Arabidopsis halleri subsp. halleri partial mRNA for putative o-acetylserine thiol lyase (oasa1 gene) Length = 916 Score = 54.0 bits (27), Expect = 3e-04 Identities = 96/119 (80%) Strand = Plus / Plus Query: 215 atggagccctgctccagcgtcaaggacaggattgggtacagcatgatcaccgacgcagag 274 ||||| || ||||| ||||| || ||||||||||| | ||||||||| | || ||||| Sbjct: 65 atggaaccatgctctagcgttaaagacaggattggtttcagcatgatttctgatgcagaa 124 Query: 275 gagaaggggttcatcgtcccaggcaagagtgtgctgattgagccaaccagtggcaacac 333 ||||||| | ||| ||||| |||||||||||||||||||||| ||||| ||||| Sbjct: 125 aagaagggtcttatcaaaccaggagagagtgtgctgattgagccaacaagtggaaacac 183
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 52.0 bits (26), Expect = 0.001 Identities = 41/46 (89%) Strand = Plus / Plus Query: 195 tcgccgccaagctcgagtccatggagccctgctccagcgtcaagga 240 |||| |||||||| ||| |||||||||||||||||| |||||||| Sbjct: 30468420 tcgctgccaagcttgagatcatggagccctgctccagtgtcaagga 30468465
>emb|Z97337.2|ATFCA2 Arabidopsis thaliana DNA chromosome 4, ESSA I FCA contig fragment No. 2 Length = 202860 Score = 52.0 bits (26), Expect = 0.001 Identities = 32/34 (94%) Strand = Plus / Minus Query: 300 agagtgtgctgattgagccaaccagtggcaacac 333 |||||||||||||||||||||| ||||| ||||| Sbjct: 84663 agagtgtgctgattgagccaacaagtggaaacac 84630
>emb|X81697.1|ATCYTACS1 A.thaliana cytACS1 mRNA for cysteine synthase Length = 1278 Score = 52.0 bits (26), Expect = 0.001 Identities = 32/34 (94%) Strand = Plus / Plus Query: 300 agagtgtgctgattgagccaaccagtggcaacac 333 |||||||||||||||||||||| ||||| ||||| Sbjct: 295 agagtgtgctgattgagccaacaagtggaaacac 328
>emb|X64874.1|CACYSSYNM C.annuum mRNA for cysteine synthase Length = 1313 Score = 52.0 bits (26), Expect = 0.001 Identities = 44/50 (88%) Strand = Plus / Plus Query: 312 ttgagccaaccagtggcaacacaggcattgggctggccttcatggctgct 361 ||||||| || ||||| |||||||||||||| || |||||||| |||||| Sbjct: 399 ttgagcctacgagtggaaacacaggcattggtcttgccttcattgctgct 448
>emb|AJ272027.1|ATH272027 Arabidopsis thaliana oasA1 gene for O-acetylserine (thiol) lyase A1, exons 1-11 Length = 5340 Score = 52.0 bits (26), Expect = 0.001 Identities = 32/34 (94%) Strand = Plus / Plus Query: 300 agagtgtgctgattgagccaaccagtggcaacac 333 |||||||||||||||||||||| ||||| ||||| Sbjct: 2603 agagtgtgctgattgagccaacaagtggaaacac 2636
>gb|AC087852.11| Oryza sativa chromosome 3 BAC OJ1124_H03 genomic sequence, complete sequence Length = 149380 Score = 52.0 bits (26), Expect = 0.001 Identities = 41/46 (89%) Strand = Plus / Minus Query: 195 tcgccgccaagctcgagtccatggagccctgctccagcgtcaagga 240 |||| |||||||| ||| |||||||||||||||||| |||||||| Sbjct: 8595 tcgctgccaagcttgagatcatggagccctgctccagtgtcaagga 8550
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 52.0 bits (26), Expect = 0.001 Identities = 41/46 (89%) Strand = Plus / Plus Query: 195 tcgccgccaagctcgagtccatggagccctgctccagcgtcaagga 240 |||| |||||||| ||| |||||||||||||||||| |||||||| Sbjct: 30559842 tcgctgccaagcttgagatcatggagccctgctccagtgtcaagga 30559887
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 52.0 bits (26), Expect = 0.001 Identities = 29/30 (96%) Strand = Plus / Plus Query: 320 accagtggcaacacaggcattgggctggcc 349 |||||||||||||| ||||||||||||||| Sbjct: 3689562 accagtggcaacaccggcattgggctggcc 3689591 Score = 40.1 bits (20), Expect = 4.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 108 cggcgatcgccagggatgtcaccg 131 ||||||||||||| |||||||||| Sbjct: 2981330 cggcgatcgccagcgatgtcaccg 2981353
>emb|AL161540.2|ATCHRIV40 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 40 Length = 197405 Score = 52.0 bits (26), Expect = 0.001 Identities = 32/34 (94%) Strand = Plus / Minus Query: 300 agagtgtgctgattgagccaaccagtggcaacac 333 |||||||||||||||||||||| ||||| ||||| Sbjct: 30117 agagtgtgctgattgagccaacaagtggaaacac 30084
>gb|AY325893.1| Porphyra purpurea cysteine synthase (CS) mRNA, complete cds Length = 1466 Score = 50.1 bits (25), Expect = 0.005 Identities = 28/29 (96%) Strand = Plus / Plus Query: 200 gccaagctcgagtccatggagccctgctc 228 ||||||||||||||||||||||| ||||| Sbjct: 422 gccaagctcgagtccatggagccgtgctc 450
>ref|NM_180692.1| Arabidopsis thaliana OASC; cysteine synthase AT3G59760 (OASC) transcript variant AT3G59760.2 mRNA, complete cds Length = 1553 Score = 48.1 bits (24), Expect = 0.020 Identities = 48/56 (85%) Strand = Plus / Plus Query: 200 gccaagctcgagtccatggagccctgctccagcgtcaaggacaggattgggtacag 255 ||||| |||||| ||||||||| || | ||| |||||||| |||||||||||||| Sbjct: 495 gccaaactcgagatcatggagccatgttgcagtgtcaaggataggattgggtacag 550
>ref|NM_115838.3| Arabidopsis thaliana OASC; cysteine synthase AT3G59760 (OASC) transcript variant AT3G59760.3 mRNA, complete cds Length = 1558 Score = 48.1 bits (24), Expect = 0.020 Identities = 48/56 (85%) Strand = Plus / Plus Query: 200 gccaagctcgagtccatggagccctgctccagcgtcaaggacaggattgggtacag 255 ||||| |||||| ||||||||| || | ||| |||||||| |||||||||||||| Sbjct: 495 gccaaactcgagatcatggagccatgttgcagtgtcaaggataggattgggtacag 550
>ref|NM_180691.1| Arabidopsis thaliana OASC; cysteine synthase AT3G59760 (OASC) transcript variant AT3G59760.1 mRNA, complete cds Length = 1544 Score = 48.1 bits (24), Expect = 0.020 Identities = 48/56 (85%) Strand = Plus / Plus Query: 200 gccaagctcgagtccatggagccctgctccagcgtcaaggacaggattgggtacag 255 ||||| |||||| ||||||||| || | ||| |||||||| |||||||||||||| Sbjct: 495 gccaaactcgagatcatggagccatgttgcagtgtcaaggataggattgggtacag 550
>ref|NM_189518.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1230 Score = 48.1 bits (24), Expect = 0.020 Identities = 57/68 (83%) Strand = Plus / Plus Query: 194 gtcgccgccaagctcgagtccatggagccctgctccagcgtcaaggacaggattgggtac 253 ||||| || ||||||||| ||||||||||| | ||| |||||||||||||| || ||| Sbjct: 301 gtcgctgctaagctcgagattatggagccctgttgcagtgtcaaggacaggataggatac 360 Query: 254 agcatgat 261 || ||||| Sbjct: 361 agtatgat 368 Score = 42.1 bits (21), Expect = 1.2 Identities = 39/45 (86%) Strand = Plus / Plus Query: 317 ccaaccagtggcaacacaggcattgggctggccttcatggctgct 361 ||||| ||||| || ||||||||||| || |||||||| |||||| Sbjct: 478 ccaacaagtggaaatacaggcattggtcttgccttcattgctgct 522
>emb|X81973.1|ATCSMRNA A.thaliana mRNA for cysteine synthase Length = 1564 Score = 48.1 bits (24), Expect = 0.020 Identities = 48/56 (85%) Strand = Plus / Plus Query: 200 gccaagctcgagtccatggagccctgctccagcgtcaaggacaggattgggtacag 255 ||||| |||||| ||||||||| || | ||| |||||||| |||||||||||||| Sbjct: 454 gccaaactcgagatcatggagccatgttgcagtgtcaaggataggattgggtacag 509
>emb|X66860.1|SOCYSK S.oleracea cysk mRNA for O-acetylserine(thiol) lyase Length = 1432 Score = 48.1 bits (24), Expect = 0.020 Identities = 42/48 (87%) Strand = Plus / Plus Query: 214 catggagccctgctccagcgtcaaggacaggattgggtacagcatgat 261 |||||| || |||| ||| ||||||||||||||||| ||||| ||||| Sbjct: 353 catggaaccttgctgcagtgtcaaggacaggattggctacagtatgat 400
>emb|AJ271727.1|ATH271727 Arabidopsis thaliana partial mRNA for O-acetylserine (thiol) lyase (oasC gene) Length = 1377 Score = 48.1 bits (24), Expect = 0.020 Identities = 48/56 (85%) Strand = Plus / Plus Query: 200 gccaagctcgagtccatggagccctgctccagcgtcaaggacaggattgggtacag 255 ||||| |||||| ||||||||| || | ||| |||||||| |||||||||||||| Sbjct: 295 gccaaactcgagatcatggagccatgttgcagtgtcaaggataggattgggtacag 350
>gb|AY128885.1| Arabidopsis thaliana cysteine synthase (At3g59760) mRNA, complete cds Length = 1460 Score = 48.1 bits (24), Expect = 0.020 Identities = 48/56 (85%) Strand = Plus / Plus Query: 200 gccaagctcgagtccatggagccctgctccagcgtcaaggacaggattgggtacag 255 ||||| |||||| ||||||||| || | ||| |||||||| |||||||||||||| Sbjct: 424 gccaaactcgagatcatggagccatgttgcagtgtcaaggataggattgggtacag 479
>gb|AY099721.1| Arabidopsis thaliana cysteine synthase (At3g59760) mRNA, complete cds Length = 1556 Score = 48.1 bits (24), Expect = 0.020 Identities = 48/56 (85%) Strand = Plus / Plus Query: 200 gccaagctcgagtccatggagccctgctccagcgtcaaggacaggattgggtacag 255 ||||| |||||| ||||||||| || | ||| |||||||| |||||||||||||| Sbjct: 494 gccaaactcgagatcatggagccatgttgcagtgtcaaggataggattgggtacag 549
>emb|BX823399.1|CNS0A6L6 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS32ZE09 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1500 Score = 48.1 bits (24), Expect = 0.020 Identities = 48/56 (85%) Strand = Plus / Plus Query: 200 gccaagctcgagtccatggagccctgctccagcgtcaaggacaggattgggtacag 255 ||||| |||||| ||||||||| || | ||| |||||||| |||||||||||||| Sbjct: 462 gccaaactcgagatcatggagccatgttgcagtgtcaaggataggattgggtacag 517
>dbj|AK104704.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-037-D03, full insert sequence Length = 1555 Score = 48.1 bits (24), Expect = 0.020 Identities = 57/68 (83%) Strand = Plus / Plus Query: 194 gtcgccgccaagctcgagtccatggagccctgctccagcgtcaaggacaggattgggtac 253 ||||| || ||||||||| ||||||||||| | ||| |||||||||||||| || ||| Sbjct: 353 gtcgctgctaagctcgagattatggagccctgttgcagtgtcaaggacaggataggatac 412 Query: 254 agcatgat 261 || ||||| Sbjct: 413 agtatgat 420 Score = 42.1 bits (21), Expect = 1.2 Identities = 39/45 (86%) Strand = Plus / Plus Query: 317 ccaaccagtggcaacacaggcattgggctggccttcatggctgct 361 ||||| ||||| || ||||||||||| || |||||||| |||||| Sbjct: 476 ccaacaagtggaaatacaggcattggtcttgccttcattgctgct 520
>dbj|AK099217.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013079H24, full insert sequence Length = 1562 Score = 48.1 bits (24), Expect = 0.020 Identities = 57/68 (83%) Strand = Plus / Plus Query: 194 gtcgccgccaagctcgagtccatggagccctgctccagcgtcaaggacaggattgggtac 253 ||||| || ||||||||| ||||||||||| | ||| |||||||||||||| || ||| Sbjct: 364 gtcgctgctaagctcgagattatggagccctgttgcagtgtcaaggacaggataggatac 423 Query: 254 agcatgat 261 || ||||| Sbjct: 424 agtatgat 431 Score = 42.1 bits (21), Expect = 1.2 Identities = 39/45 (86%) Strand = Plus / Plus Query: 317 ccaaccagtggcaacacaggcattgggctggccttcatggctgct 361 ||||| ||||| || ||||||||||| || |||||||| |||||| Sbjct: 487 ccaacaagtggaaatacaggcattggtcttgccttcattgctgct 531
>dbj|AK065652.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013035B06, full insert sequence Length = 2104 Score = 48.1 bits (24), Expect = 0.020 Identities = 57/68 (83%) Strand = Plus / Plus Query: 194 gtcgccgccaagctcgagtccatggagccctgctccagcgtcaaggacaggattgggtac 253 ||||| || ||||||||| ||||||||||| | ||| |||||||||||||| || ||| Sbjct: 895 gtcgctgctaagctcgagattatggagccctgttgcagtgtcaaggacaggataggatac 954 Query: 254 agcatgat 261 || ||||| Sbjct: 955 agtatgat 962 Score = 42.1 bits (21), Expect = 1.2 Identities = 39/45 (86%) Strand = Plus / Plus Query: 317 ccaaccagtggcaacacaggcattgggctggccttcatggctgct 361 ||||| ||||| || ||||||||||| || |||||||| |||||| Sbjct: 1018 ccaacaagtggaaatacaggcattggtcttgccttcattgctgct 1062
>dbj|AK065007.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001E19, full insert sequence Length = 1602 Score = 48.1 bits (24), Expect = 0.020 Identities = 57/68 (83%) Strand = Plus / Plus Query: 194 gtcgccgccaagctcgagtccatggagccctgctccagcgtcaaggacaggattgggtac 253 ||||| || ||||||||| ||||||||||| | ||| |||||||||||||| || ||| Sbjct: 401 gtcgctgctaagctcgagattatggagccctgttgcagtgtcaaggacaggataggatac 460 Query: 254 agcatgat 261 || ||||| Sbjct: 461 agtatgat 468 Score = 42.1 bits (21), Expect = 1.2 Identities = 39/45 (86%) Strand = Plus / Plus Query: 317 ccaaccagtggcaacacaggcattgggctggccttcatggctgct 361 ||||| ||||| || ||||||||||| || |||||||| |||||| Sbjct: 524 ccaacaagtggaaatacaggcattggtcttgccttcattgctgct 568
>dbj|D14722.1|SPICYSSY Spinacia oleracea mRNA for chloroplast cysteine synthase, complete cds Length = 1484 Score = 48.1 bits (24), Expect = 0.020 Identities = 42/48 (87%) Strand = Plus / Plus Query: 214 catggagccctgctccagcgtcaaggacaggattgggtacagcatgat 261 |||||| || |||| ||| ||||||||||||||||| ||||| ||||| Sbjct: 361 catggaaccttgctgcagtgtcaaggacaggattggctacagtatgat 408
>gb|L05184.1|SPIOACET Spinacia oleracea chlorplast O-acetylserine-(thiol)-lyase mRNA, complete cds Length = 1446 Score = 48.1 bits (24), Expect = 0.020 Identities = 42/48 (87%) Strand = Plus / Plus Query: 214 catggagccctgctccagcgtcaaggacaggattgggtacagcatgat 261 |||||| || |||| ||| ||||||||||||||||| ||||| ||||| Sbjct: 342 catggaaccttgctgcagtgtcaaggacaggattggctacagtatgat 389
>emb|CR522870.1| Desulfotalea psychrophila LSv54 chromosome Length = 3523383 Score = 46.1 bits (23), Expect = 0.078 Identities = 32/35 (91%) Strand = Plus / Minus Query: 317 ccaaccagtggcaacacaggcattgggctggcctt 351 ||||||||||||||||| || |||||||| ||||| Sbjct: 1385390 ccaaccagtggcaacactggtattgggctcgcctt 1385356
>gb|AC091811.7| Oryza sativa chromosome 3 BAC OSJNBa0069E14 genomic sequence, complete sequence Length = 139872 Score = 46.1 bits (23), Expect = 0.078 Identities = 26/27 (96%) Strand = Plus / Plus Query: 214 catggagccctgctccagcgtcaagga 240 |||||||||||||||||| |||||||| Sbjct: 12 catggagccctgctccagtgtcaagga 38
>dbj|D10476.1|SPIOAL Spinach mRNA for O-acetylserine(thiol)-lyase, complete cds Length = 1281 Score = 46.1 bits (23), Expect = 0.078 Identities = 38/43 (88%) Strand = Plus / Plus Query: 300 agagtgtgctgattgagccaaccagtggcaacacaggcattgg 342 ||||||| ||||||||||| |||||||| || || |||||||| Sbjct: 260 agagtgtcctgattgagcccaccagtggaaatactggcattgg 302
>ref|NM_113145.3| Arabidopsis thaliana catalytic/ cysteine synthase AT3G22460 mRNA, complete cds Length = 1217 Score = 44.1 bits (22), Expect = 0.31 Identities = 31/34 (91%) Strand = Plus / Plus Query: 300 agagtgtgctgattgagccaaccagtggcaacac 333 |||||||| ||||||||||||| ||||| ||||| Sbjct: 292 agagtgtgttgattgagccaacaagtgggaacac 325
>gb|AY766094.1| Allium sativum cysteine synthase GCS3 (gcs3) mRNA, complete cds Length = 1296 Score = 44.1 bits (22), Expect = 0.31 Identities = 55/66 (83%) Strand = Plus / Plus Query: 214 catggagccctgctccagcgtcaaggacaggattgggtacagcatgatcaccgacgcaga 273 |||||||||||| || || ||||| || ||||||| || |||||||||| || ||||| Sbjct: 241 catggagccctgttctagtgtcaaagataggattgcgttgagcatgatcaatgatgcaga 300 Query: 274 ggagaa 279 |||||| Sbjct: 301 ggagaa 306
>ref|XM_416752.1| PREDICTED: Gallus gallus similar to hypothetical protein (LOC418545), mRNA Length = 1751 Score = 44.1 bits (22), Expect = 0.31 Identities = 34/38 (89%) Strand = Plus / Plus Query: 314 gagccaaccagtggcaacacaggcattgggctggcctt 351 ||||||||| ||| |||||||| |||||||||||||| Sbjct: 522 gagccaacctctggaaacacaggaattgggctggcctt 559
>gb|AY063827.1| Arabidopsis thaliana At3g22460 mRNA sequence Length = 1233 Score = 44.1 bits (22), Expect = 0.31 Identities = 31/34 (91%) Strand = Plus / Plus Query: 300 agagtgtgctgattgagccaaccagtggcaacac 333 |||||||| ||||||||||||| ||||| ||||| Sbjct: 292 agagtgtgttgattgagccaacaagtgggaacac 325
>emb|CR353850.1| Gallus gallus finished cDNA, clone ChEST821g21 Length = 780 Score = 44.1 bits (22), Expect = 0.31 Identities = 34/38 (89%) Strand = Plus / Plus Query: 314 gagccaaccagtggcaacacaggcattgggctggcctt 351 ||||||||| ||| |||||||| |||||||||||||| Sbjct: 565 gagccaacctctggaaacacaggaattgggctggcctt 602
>dbj|AP000731.1| Arabidopsis thaliana genomic DNA, chromosome 3, BAC clone:F16J14 Length = 47827 Score = 44.1 bits (22), Expect = 0.31 Identities = 31/34 (91%) Strand = Plus / Plus Query: 300 agagtgtgctgattgagccaaccagtggcaacac 333 |||||||| ||||||||||||| ||||| ||||| Sbjct: 1376 agagtgtgttgattgagccaacaagtgggaacac 1409
>emb|AJ011976.1|ATH011976 Arabidopsis thaliana mRNA for cysteine synthase Length = 1368 Score = 44.1 bits (22), Expect = 0.31 Identities = 31/34 (91%) Strand = Plus / Plus Query: 300 agagtgtgctgattgagccaaccagtggcaacac 333 |||||||| ||||||||||||| ||||| ||||| Sbjct: 408 agagtgtgttgattgagccaacaagtgggaacac 441
>emb|AJ272028.1|ATH272028 Arabidopsis thaliana partial oasA2 pseudogene for O-acetylserine (thiol) lyase A2, exons 1-6 Length = 3883 Score = 44.1 bits (22), Expect = 0.31 Identities = 31/34 (91%) Strand = Plus / Plus Query: 300 agagtgtgctgattgagccaaccagtggcaacac 333 |||||||| ||||||||||||| ||||| ||||| Sbjct: 3452 agagtgtgttgattgagccaacaagtgggaacac 3485
>dbj|AB031003.1| Cyanidioschyzon merolae cmOASTL1 gene for O-acetylserine (thiol) lyase 1, complete cds Length = 1170 Score = 44.1 bits (22), Expect = 0.31 Identities = 25/26 (96%) Strand = Plus / Plus Query: 203 aagctcgagtccatggagccctgctc 228 ||||| |||||||||||||||||||| Sbjct: 295 aagctggagtccatggagccctgctc 320
>ref|NM_129937.2| Arabidopsis thaliana OASB (CYSTEINE SYNTHASE 1); cysteine synthase AT2G43750 (OASB) mRNA, complete cds Length = 1602 Score = 42.1 bits (21), Expect = 1.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 233 gtcaaggacaggattgggtacagcatgat 261 |||||||| |||||||||||||| ||||| Sbjct: 573 gtcaaggataggattgggtacagtatgat 601
>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome Length = 2584158 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 133 gctgatcgggaacacgccgct 153 ||||||||||||||||||||| Sbjct: 1836671 gctgatcgggaacacgccgct 1836651
>gb|BT014000.1| Lycopersicon esculentum clone 133047R, mRNA sequence Length = 1307 Score = 42.1 bits (21), Expect = 1.2 Identities = 57/69 (82%) Strand = Plus / Plus Query: 214 catggagccctgctccagcgtcaaggacaggattgggtacagcatgatcaccgacgcaga 273 ||||||||| ||||| || || ||||| |||||||| || || ||||| || || || || Sbjct: 181 catggagccatgctctagtgttaaggataggattggttatagtatgattacagatgctga 240 Query: 274 ggagaaggg 282 ||||||||| Sbjct: 241 ggagaaggg 249
>gb|CP000352.1| Ralstonia metallidurans CH34, complete genome Length = 3928089 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 15 cagcggccgccacttcgtcca 35 ||||||||||||||||||||| Sbjct: 1430061 cagcggccgccacttcgtcca 1430081
>emb|Z83236.1|CEK10H10 Caenorhabditis elegans Cosmid K10H10, complete sequence Length = 30033 Score = 42.1 bits (21), Expect = 1.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 304 tgtgctgattgagccaaccagtggcaaca 332 |||||| ||||||||||||||||| |||| Sbjct: 5743 tgtgctcattgagccaaccagtggaaaca 5715
>emb|AM087458.1| Nicotiana tabacum mRNA for putative cytosolic cysteine synthase 7 (oas7 gene) Length = 1256 Score = 42.1 bits (21), Expect = 1.2 Identities = 72/89 (80%) Strand = Plus / Plus Query: 191 cgcgtcgccgccaagctcgagtccatggagccctgctccagcgtcaaggacaggattggg 250 ||||| || ||||||||||| ||||||||| ||||| || || ||||| |||||||| Sbjct: 154 cgcgttgctgccaagctcgaaagcatggagccgtgctctagtgttaaggataggattggt 213 Query: 251 tacagcatgatcaccgacgcagaggagaa 279 || || ||||| || || || |||||||| Sbjct: 214 tatagtatgattacggatgctgaggagaa 242
>emb|AL844851.4| Human DNA sequence from clone DAQB-335A13 on chromosome 6 Contains the HCP5P15 pseudogene for HLA complex P5 pseudogene 15, the HLA-F gene for major histocompatibility complex, class I, F, the RPL23AP1 pseudogene for ribosomal protein L23a 1, the DAQB-335A13.8 locus for novel transcripts sharing homology with MICE, the MICE pseudogene for MHC class I polypeptide-related sequence E, the HCG9P5 pseudogene for HLA complex group 9 pseudogene 5, the IFITM4P pseudogene for interferon induced transmembrane protein 4, the HCP5P14 pseudogene for HLA complex P5 pseudogene 14, the HCG4 gene for HLA complex group 4, the HCP5P13 pseudogene for HLA complex P5 pseudogene 13, the DAQB-335A13.14 locus for novel transcripts that share homology with HLA-75, the pseudogene HLA-75, the HLA-90 pseudogene, the RPL7AP7 pseudogene for ribosomal protein L7a pseudogene 7, the MICG pseudogene for MHC class I polypeptide-related sequence G, and 4 CpG islands, complete sequence Length = 119030 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 74 tcgtcgggcggcgggatgggggagg 98 |||||||| |||||||||||||||| Sbjct: 90912 tcgtcgggtggcgggatgggggagg 90936
>emb|AL671561.7| Human DNA sequence from clone XXbac-209H21 on chromosome 6 contains a HLA (MHC) class 1 pseudogene, a putative novel MHC class 1 (HLA) protein (fragment), a 60S ribosomal protein L7A (RPL7A) pseudogene, a P5-1 pseudogene, the HLA-G gene for histompatibility antigen, class I, G, a major histocompatibility complex, class I, H pseudogene (HLA-H, HLAHP) and five CpG islands, complete sequence Length = 105633 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 74 tcgtcgggcggcgggatgggggagg 98 |||||||| |||||||||||||||| Sbjct: 526 tcgtcgggtggcgggatgggggagg 550
>emb|AL669813.6| Human DNA sequence from clone XXbac-231I11 on chromosome 6 contains the 3' end of the gene for myelin oligodendrocyte glycoprotein (MOG), a novel KRAB box-containing C2H2 type zinc finger protein (fragment), a P5-1 pseudogene, the HLA-F gene for major histocompatibility complex, class I, F (HLAF, HLA-5.4, HLA-CDA12), a 60S ribosomal protein L23A (RPL23A) pseudogene, a MHC class 1 polypeptide-related sequence B (MICB) pseudogene, a HCGIX pseudogene, a interferon-induced transmembrane protein 3 (IFITM3, 1-8U) pseudogene and four CpG islands, complete sequence Length = 115133 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 74 tcgtcgggcggcgggatgggggagg 98 |||||||| |||||||||||||||| Sbjct: 113659 tcgtcgggtggcgggatgggggagg 113683
>gb|AY096681.1| Arabidopsis thaliana putative cysteine synthase cpACS1 (At2g43750) mRNA, complete cds Length = 1210 Score = 42.1 bits (21), Expect = 1.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 233 gtcaaggacaggattgggtacagcatgat 261 |||||||| |||||||||||||| ||||| Sbjct: 343 gtcaaggataggattgggtacagtatgat 371
>emb|X81698.1|ATCPACS1 A.thaliana cpACS1 mRNA for cysteine synthase Length = 1420 Score = 42.1 bits (21), Expect = 1.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 233 gtcaaggacaggattgggtacagcatgat 261 |||||||| |||||||||||||| ||||| Sbjct: 398 gtcaaggataggattgggtacagtatgat 426
>emb|X80377.2|ATOACLY2 Arabidopsis thaliana mRNA for O-acetylserine lyase (At.OAS.7-4) Length = 1378 Score = 42.1 bits (21), Expect = 1.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 233 gtcaaggacaggattgggtacagcatgat 261 |||||||| |||||||||||||| ||||| Sbjct: 355 gtcaaggataggattgggtacagtatgat 383
>gb|AY065375.1| Arabidopsis thaliana cysteine synthase cpACS1 (At2g43750) mRNA, complete cds Length = 1489 Score = 42.1 bits (21), Expect = 1.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 233 gtcaaggacaggattgggtacagcatgat 261 |||||||| |||||||||||||| ||||| Sbjct: 467 gtcaaggataggattgggtacagtatgat 495
>emb|CR925767.6| Human DNA sequence from clone DAAP-84C21 on chromosome 6, complete sequence Length = 112545 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 74 tcgtcgggcggcgggatgggggagg 98 |||||||| |||||||||||||||| Sbjct: 27683 tcgtcgggtggcgggatgggggagg 27707
>ref|NM_064607.2| Caenorhabditis elegans K10H10.2 (beta-synthase) mRNA, complete cds Length = 1188 Score = 42.1 bits (21), Expect = 1.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 304 tgtgctgattgagccaaccagtggcaaca 332 |||||| ||||||||||||||||| |||| Sbjct: 302 tgtgctcattgagccaaccagtggaaaca 330
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 42.1 bits (21), Expect = 1.2 Identities = 39/45 (86%) Strand = Plus / Minus Query: 317 ccaaccagtggcaacacaggcattgggctggccttcatggctgct 361 ||||| ||||| || ||||||||||| || |||||||| |||||| Sbjct: 43227875 ccaacaagtggaaatacaggcattggtcttgccttcattgctgct 43227831 Score = 40.1 bits (20), Expect = 4.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 18 cggccgccacttcgtccacctcca 41 ||||||||||||||||| |||||| Sbjct: 2982574 cggccgccacttcgtccgcctcca 2982597
>gb|AF324490.1|AF324490 Anas platyrhynchos membrane-bound immunoglobulin alpha heavy chain mRNA, partial cds, alternatively spliced Length = 440 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 27 cttcgtccacctccagctccg 47 ||||||||||||||||||||| Sbjct: 268 cttcgtccacctccagctccg 248
>emb|BX819476.1|CNS0A9QD Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB80ZG05 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1346 Score = 42.1 bits (21), Expect = 1.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 233 gtcaaggacaggattgggtacagcatgat 261 |||||||| |||||||||||||| ||||| Sbjct: 383 gtcaaggataggattgggtacagtatgat 411
>dbj|AP003228.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0020E09 Length = 149195 Score = 42.1 bits (21), Expect = 1.2 Identities = 39/45 (86%) Strand = Plus / Minus Query: 317 ccaaccagtggcaacacaggcattgggctggccttcatggctgct 361 ||||| ||||| || ||||||||||| || |||||||| |||||| Sbjct: 115330 ccaacaagtggaaatacaggcattggtcttgccttcattgctgct 115286
>dbj|AP007260.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, fosmid clone: OSJNOa275J08 Length = 36356 Score = 42.1 bits (21), Expect = 1.2 Identities = 39/45 (86%) Strand = Plus / Minus Query: 317 ccaaccagtggcaacacaggcattgggctggccttcatggctgct 361 ||||| ||||| || ||||||||||| || |||||||| |||||| Sbjct: 1950 ccaacaagtggaaatacaggcattggtcttgccttcattgctgct 1906
>gb|AY086156.1| Arabidopsis thaliana clone 21866 mRNA, complete sequence Length = 1503 Score = 42.1 bits (21), Expect = 1.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 233 gtcaaggacaggattgggtacagcatgat 261 |||||||| |||||||||||||| ||||| Sbjct: 498 gtcaaggataggattgggtacagtatgat 526
>dbj|BA000025.2| Homo sapiens genomic DNA, chromosome 6p21.3, HLA Class I region Length = 2229817 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 74 tcgtcgggcggcgggatgggggagg 98 |||||||| |||||||||||||||| Sbjct: 2154521 tcgtcgggtggcgggatgggggagg 2154497
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 71 cgctcgtcgggcggcgggatg 91 ||||||||||||||||||||| Sbjct: 2834767 cgctcgtcgggcggcgggatg 2834787
>emb|AJ314756.1|APL314756 Anas platyrhynchos partial mRNA for immunoglobulin alpha heavy chain (mIgA gene) Length = 440 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 27 cttcgtccacctccagctccg 47 ||||||||||||||||||||| Sbjct: 268 cttcgtccacctccagctccg 248
>dbj|AB023058.1| Homo sapiens genomic DNA, chromosome 6p21.3, HLA class I region, clone:950A3, complete sequence Length = 114450 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 74 tcgtcgggcggcgggatgggggagg 98 |||||||| |||||||||||||||| Sbjct: 39154 tcgtcgggtggcgggatgggggagg 39130
>ref|NM_184430.2| Oryza sativa (japonica cultivar-group), mRNA Length = 3038 Score = 40.1 bits (20), Expect = 4.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 18 cggccgccacttcgtccacctcca 41 ||||||||||||||||| |||||| Sbjct: 518 cggccgccacttcgtccgcctcca 541
>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome Length = 6438405 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 296 ggcaagagtgtgctgattga 315 |||||||||||||||||||| Sbjct: 4261410 ggcaagagtgtgctgattga 4261391
>ref|XM_322803.1| Neurospora crassa OR74A hypothetical protein (NCU03546.1) partial mRNA Length = 4401 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 90 tgggggaggcttcgacgccg 109 |||||||||||||||||||| Sbjct: 3601 tgggggaggcttcgacgccg 3582
>ref|XM_951732.1| Neurospora crassa OR74A hypothetical protein (NCU03546.1) partial mRNA Length = 4401 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 90 tgggggaggcttcgacgccg 109 |||||||||||||||||||| Sbjct: 3601 tgggggaggcttcgacgccg 3582
>ref|XR_003996.1| PREDICTED: Mus musculus similar to ring finger and KH domain containing 2 (LOC672777), mRNA Length = 903 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 27 cttcgtccacctccagctcc 46 |||||||||||||||||||| Sbjct: 208 cttcgtccacctccagctcc 189
>gb|AC134447.2| Mus musculus BAC clone RP24-186D1 from chromosome 18, complete sequence Length = 179514 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 27 cttcgtccacctccagctcc 46 |||||||||||||||||||| Sbjct: 99651 cttcgtccacctccagctcc 99632
>ref|XM_502161.1| Yarrowia lipolytica CLIB122, YALI0C22990g predicted mRNA Length = 2532 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 210 agtccatggagccctgctcc 229 |||||||||||||||||||| Sbjct: 2407 agtccatggagccctgctcc 2388
>gb|AC107980.8| Homo sapiens chromosome 15, clone CTD-3118D7, complete sequence Length = 141868 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 269 gcagaggagaaggggttcat 288 |||||||||||||||||||| Sbjct: 41557 gcagaggagaaggggttcat 41576
>gb|CP000089.1| Dechloromonas aromatica RCB, complete genome Length = 4501104 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 229 cagcgtcaaggacaggattg 248 |||||||||||||||||||| Sbjct: 4427403 cagcgtcaaggacaggattg 4427422
>emb|AL669986.1|NCB7N14 Neurospora crassa DNA linkage group II BAC clone B7N14 Length = 107947 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 90 tgggggaggcttcgacgccg 109 |||||||||||||||||||| Sbjct: 84472 tgggggaggcttcgacgccg 84453
>emb|AJ299249.1|NTA299249 Nicotiana tabacum mRNA for cysteine synthase (cs1 gene), clone 4T7 Length = 1493 Score = 40.1 bits (20), Expect = 4.8 Identities = 41/48 (85%) Strand = Plus / Plus Query: 121 ggatgtcaccgagctgatcgggaacacgccgctggtgtacctcaacaa 168 ||||||||| ||||| ||||||||||| || |||| || |||||||| Sbjct: 114 ggatgtcacagagcttatcgggaacacccctatggtatatctcaacaa 161
>dbj|AP007155.1| Aspergillus oryzae RIB40 genomic DNA, SC003 Length = 4170692 Score = 40.1 bits (20), Expect = 4.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 278 aaggggttcatcgtcccaggcaagagtg 305 |||||||||||| ||||||| ||||||| Sbjct: 2005567 aaggggttcatcatcccaggtaagagtg 2005594
>ref|NM_001039214.1| Mus musculus ring finger and KH domain containing 2 (Rkhd2), mRNA Length = 2052 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 27 cttcgtccacctccagctcc 46 |||||||||||||||||||| Sbjct: 584 cttcgtccacctccagctcc 565
>dbj|AK133686.1| Mus musculus adult male pituitary gland cDNA, RIKEN full-length enriched library, clone:5330437G16 product:hypothetical Proline-rich region profile/Alanine-rich region profile/Glutamic acid-rich region profile containing protein, full insert sequence Length = 2052 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 27 cttcgtccacctccagctcc 46 |||||||||||||||||||| Sbjct: 584 cttcgtccacctccagctcc 565
>gb|AE015928.1| Bacteroides thetaiotaomicron VPI-5482, complete genome Length = 6260361 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 324 gtggcaacacaggcattggg 343 |||||||||||||||||||| Sbjct: 1167539 gtggcaacacaggcattggg 1167558
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 32 tccacctccagctccgggag 51 |||||||||||||||||||| Sbjct: 4971598 tccacctccagctccgggag 4971617
>dbj|BA000004.3| Bacillus halodurans C-125 DNA, complete genome Length = 4202352 Score = 40.1 bits (20), Expect = 4.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 311 attgagccaaccagtggcaacacaggcattgg 342 ||||| ||||| ||||| |||||||||||||| Sbjct: 3392022 attgaaccaacaagtggaaacacaggcattgg 3392053
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 102 cgacgccggcgatcgccagg 121 |||||||||||||||||||| Sbjct: 1596207 cgacgccggcgatcgccagg 1596226
>dbj|AP003225.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0011G08 Length = 139490 Score = 40.1 bits (20), Expect = 4.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 18 cggccgccacttcgtccacctcca 41 ||||||||||||||||| |||||| Sbjct: 64091 cggccgccacttcgtccgcctcca 64114
>dbj|AK099840.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013108C16, full insert sequence Length = 3038 Score = 40.1 bits (20), Expect = 4.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 18 cggccgccacttcgtccacctcca 41 ||||||||||||||||| |||||| Sbjct: 518 cggccgccacttcgtccgcctcca 541
>emb|CR382129.1| Yarrowia lipolytica chromosome C of strain CLIB122 of Yarrowia lipolytica Length = 3272609 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 210 agtccatggagccctgctcc 229 |||||||||||||||||||| Sbjct: 3085728 agtccatggagccctgctcc 3085747 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,314,836 Number of Sequences: 3902068 Number of extensions: 2314836 Number of successful extensions: 50884 Number of sequences better than 10.0: 121 Number of HSP's better than 10.0 without gapping: 122 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 49977 Number of HSP's gapped (non-prelim): 893 length of query: 361 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 339 effective length of database: 17,147,199,772 effective search space: 5812900722708 effective search space used: 5812900722708 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)