>ref|XM_469635.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1162

 Score = 83.8 bits (42), Expect = 2e-13
 Identities = 81/94 (86%)
 Strand = Plus / Plus

                                                                       
Query: 20  cctcgccatcgagtaggtggtggagccgtcgctcatcgccggcttcgtcgtctgctacgg 79
           |||| |||||||| | || || || |||||||| ||||||||||||||||||||||||||
Sbjct: 560 cctcaccatcgagaacgtcgtcgacccgtcgctgatcgccggcttcgtcgtctgctacgg 619

                                             
Query: 80  cctcgacgactcgcacaccatcgacctcagcgtc 113
           || || ||| || |||  ||||||||||||||||
Sbjct: 620 ccccggcgagtcccacgtcatcgacctcagcgtc 653

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 83.8 bits (42), Expect = 2e-13
 Identities = 81/94 (86%)
 Strand = Plus / Plus

                                                                            
Query: 20       cctcgccatcgagtaggtggtggagccgtcgctcatcgccggcttcgtcgtctgctacgg 79
                |||| |||||||| | || || || |||||||| ||||||||||||||||||||||||||
Sbjct: 29905836 cctcaccatcgagaacgtcgtcgacccgtcgctgatcgccggcttcgtcgtctgctacgg 29905895

                                                  
Query: 80       cctcgacgactcgcacaccatcgacctcagcgtc 113
                || || ||| || |||  ||||||||||||||||
Sbjct: 29905896 ccccggcgagtcccacgtcatcgacctcagcgtc 29905929

>gb|AY387483.1| Oryza sativa (japonica cultivar-group) BAC OSJNBa0084L17, complete
              sequence
          Length = 159661

 Score = 83.8 bits (42), Expect = 2e-13
 Identities = 81/94 (86%)
 Strand = Plus / Minus

                                                                          
Query: 20     cctcgccatcgagtaggtggtggagccgtcgctcatcgccggcttcgtcgtctgctacgg 79
              |||| |||||||| | || || || |||||||| ||||||||||||||||||||||||||
Sbjct: 104770 cctcaccatcgagaacgtcgtcgacccgtcgctgatcgccggcttcgtcgtctgctacgg 104711

                                                
Query: 80     cctcgacgactcgcacaccatcgacctcagcgtc 113
              || || ||| || |||  ||||||||||||||||
Sbjct: 104710 ccccggcgagtcccacgtcatcgacctcagcgtc 104677

>gb|AC118133.4| Oryza sativa chromosome 3 BAC OSJNBb0016H12 genomic sequence, complete
             sequence
          Length = 139946

 Score = 83.8 bits (42), Expect = 2e-13
 Identities = 81/94 (86%)
 Strand = Plus / Plus

                                                                         
Query: 20    cctcgccatcgagtaggtggtggagccgtcgctcatcgccggcttcgtcgtctgctacgg 79
             |||| |||||||| | || || || |||||||| ||||||||||||||||||||||||||
Sbjct: 71777 cctcaccatcgagaacgtcgtcgacccgtcgctgatcgccggcttcgtcgtctgctacgg 71836

                                               
Query: 80    cctcgacgactcgcacaccatcgacctcagcgtc 113
             || || ||| || |||  ||||||||||||||||
Sbjct: 71837 ccccggcgagtcccacgtcatcgacctcagcgtc 71870

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 83.8 bits (42), Expect = 2e-13
 Identities = 81/94 (86%)
 Strand = Plus / Plus

                                                                            
Query: 20       cctcgccatcgagtaggtggtggagccgtcgctcatcgccggcttcgtcgtctgctacgg 79
                |||| |||||||| | || || || |||||||| ||||||||||||||||||||||||||
Sbjct: 29997258 cctcaccatcgagaacgtcgtcgacccgtcgctgatcgccggcttcgtcgtctgctacgg 29997317

                                                  
Query: 80       cctcgacgactcgcacaccatcgacctcagcgtc 113
                || || ||| || |||  ||||||||||||||||
Sbjct: 29997318 ccccggcgagtcccacgtcatcgacctcagcgtc 29997351

>dbj|AK060375.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-009-C11, full
           insert sequence
          Length = 1194

 Score = 83.8 bits (42), Expect = 2e-13
 Identities = 81/94 (86%)
 Strand = Plus / Plus

                                                                       
Query: 20  cctcgccatcgagtaggtggtggagccgtcgctcatcgccggcttcgtcgtctgctacgg 79
           |||| |||||||| | || || || |||||||| ||||||||||||||||||||||||||
Sbjct: 570 cctcaccatcgagaacgtcgtcgacccgtcgctgatcgccggcttcgtcgtctgctacgg 629

                                             
Query: 80  cctcgacgactcgcacaccatcgacctcagcgtc 113
           || || ||| || |||  ||||||||||||||||
Sbjct: 630 ccccggcgagtcccacgtcatcgacctcagcgtc 663

>gb|AF124045.1| Sorghum bicolor BAC clone 110K5, partial sequence
          Length = 78195

 Score = 71.9 bits (36), Expect = 8e-10
 Identities = 87/104 (83%)
 Strand = Plus / Minus

                                                                         
Query: 46    cgtcgctcatcgccggcttcgtcgtctgctacggcctcgacgactcgcacaccatcgacc 105
             |||| ||||||||||| |||||| |||||||||||  |||||||||||||  ||| || |
Sbjct: 77819 cgtccctcatcgccggattcgtcatctgctacggcaccgacgactcgcacgtcattgatc 77760

                                                         
Query: 106   tcagcgtccgcggccgcctcgccgcgctcaagagccgcgtcgac 149
             ||||||||    |||  |||||||||||||||| ||| ||||||
Sbjct: 77759 tcagcgtcaagagccagctcgccgcgctcaagaaccgtgtcgac 77716

>gb|AC119290.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBa0037H06, complete sequence
          Length = 144457

 Score = 42.1 bits (21), Expect = 0.73
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 49    cgctcatcgccggcttcgtcg 69
             |||||||||||||||||||||
Sbjct: 78998 cgctcatcgccggcttcgtcg 78978

>gb|AC137624.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0680F01,
              complete sequence
          Length = 156691

 Score = 42.1 bits (21), Expect = 0.73
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 49     cgctcatcgccggcttcgtcg 69
              |||||||||||||||||||||
Sbjct: 154979 cgctcatcgccggcttcgtcg 154959

>gb|AC079111.7| Homo sapiens chromosome 17, clone RP11-367G9, complete sequence
          Length = 163410

 Score = 42.1 bits (21), Expect = 0.73
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 26    catcgagtaggtggtggagcc 46
             |||||||||||||||||||||
Sbjct: 52980 catcgagtaggtggtggagcc 53000

>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score = 42.1 bits (21), Expect = 0.73
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 49      cgctcatcgccggcttcgtcg 69
               |||||||||||||||||||||
Sbjct: 8746556 cgctcatcgccggcttcgtcg 8746536

>dbj|AB091471.1| Oryza sativa (japonica cultivar-group) OsBLE3 mRNA for hypothetical
           protein, complete cds
          Length = 865

 Score = 42.1 bits (21), Expect = 0.73
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 49  cgctcatcgccggcttcgtcg 69
           |||||||||||||||||||||
Sbjct: 515 cgctcatcgccggcttcgtcg 535

>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome
          Length = 4829781

 Score = 42.1 bits (21), Expect = 0.73
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 109     gcgtccgcggccgcctcgccg 129
               |||||||||||||||||||||
Sbjct: 3683875 gcgtccgcggccgcctcgccg 3683855

>gb|L36602.1|RHMHSP70A Rhizobium meliloti (clone Rhizo70-1) heat shock protein 70 (hsp70)
            gene, complete cds
          Length = 2213

 Score = 42.1 bits (21), Expect = 0.73
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 124  tcgccgcgctcaagagccgcgtcga 148
            |||| ||||||||||||||||||||
Sbjct: 1758 tcgcagcgctcaagagccgcgtcga 1782

>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome
          Length = 3188609

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 110     cgtccgcggccgcctcgccgcgct 133
               ||||||||||||| ||||||||||
Sbjct: 2541432 cgtccgcggccgcatcgccgcgct 2541409

>gb|AE009017.1| Agrobacterium tumefaciens str. C58 circular chromosome, section 43 of
            256 of the complete sequence
          Length = 11203

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 158  cctcgacgaccgcctgcacc 177
            ||||||||||||||||||||
Sbjct: 5018 cctcgacgaccgcctgcacc 4999

>gb|AY275428.2| Oryctolagus cuniculus thromboxane A2 receptor gene, partial cds
          Length = 698

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 113 ccgcggccgcctcgccgcgc 132
           ||||||||||||||||||||
Sbjct: 206 ccgcggccgcctcgccgcgc 225

>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome
          Length = 5178466

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 32      gtaggtggtggagccgtcgc 51
               ||||||||||||||||||||
Sbjct: 4154959 gtaggtggtggagccgtcgc 4154940

>gb|AC166566.2| Spironucleus vortens clone JGIBAWF-9N13, complete sequence
          Length = 39842

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 113  ccgcggccgcctcgccgcgc 132
            ||||||||||||||||||||
Sbjct: 8376 ccgcggccgcctcgccgcgc 8395



 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 113  ccgcggccgcctcgccgcgc 132
            ||||||||||||||||||||
Sbjct: 7071 ccgcggccgcctcgccgcgc 7090

>emb|AL939116.1|SCO939116 Streptomyces coelicolor A3(2) complete genome; segment 13/29
          Length = 293050

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 63     ttcgtcgtctgctacggcctcgac 86
              ||||||||| ||||||||||||||
Sbjct: 145468 ttcgtcgtcggctacggcctcgac 145445

>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome
          Length = 7074893

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 94      acaccatcgacctcagcgtccgcg 117
               ||||||||||||||||||| ||||
Sbjct: 1460069 acaccatcgacctcagcgtgcgcg 1460046

>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome
          Length = 4940217

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 32      gtaggtggtggagccgtcgc 51
               ||||||||||||||||||||
Sbjct: 1094851 gtaggtggtggagccgtcgc 1094870

>gb|AC122146.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0022I16,
              complete sequence
          Length = 126133

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 110    cgtccgcggccgcctcgccgcgct 133
              |||||||||||||| |||||||||
Sbjct: 125102 cgtccgcggccgccacgccgcgct 125125

>gb|AE011996.1| Xanthomonas axonopodis pv. citri str. 306,  section 374 of 469 of the
            complete genome
          Length = 10994

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 32   gtaggtggtggagccgtcgc 51
            ||||||||||||||||||||
Sbjct: 6208 gtaggtggtggagccgtcgc 6189

>gb|AE012454.1| Xanthomonas campestris pv. campestris str. ATCC 33913,  section 362
            of 460 of the complete genome
          Length = 11605

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 32   gtaggtggtggagccgtcgc 51
            ||||||||||||||||||||
Sbjct: 1935 gtaggtggtggagccgtcgc 1916

>gb|AE007869.1| Agrobacterium tumefaciens str. C58, complete genome
          Length = 2841581

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 158    cctcgacgaccgcctgcacc 177
              ||||||||||||||||||||
Sbjct: 463604 cctcgacgaccgcctgcacc 463585

>gb|AC093568.2| Oryza sativa chromosome 10 clone OSJNBa0029P16, complete sequence
          Length = 173644

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 110    cgtccgcggccgcctcgccgcgct 133
              |||||||||||||| |||||||||
Sbjct: 114676 cgtccgcggccgccacgccgcgct 114653

>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome
          Length = 5148708

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 32     gtaggtggtggagccgtcgc 51
              ||||||||||||||||||||
Sbjct: 970001 gtaggtggtggagccgtcgc 970020

>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
               sequence
          Length = 22685906

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 110     cgtccgcggccgcctcgccgcgct 133
               |||||||||||||| |||||||||
Sbjct: 5428972 cgtccgcggccgccacgccgcgct 5428995

>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 51      ctcatcgccggcttcgtcgtctgc 74
               |||||||||||| |||||||||||
Sbjct: 6799460 ctcatcgccggcgtcgtcgtctgc 6799483

>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 111     gtccgcggccgcctcgccgcgctc 134
               |||||||||||| |||||||||||
Sbjct: 1034894 gtccgcggccgcgtcgccgcgctc 1034871



 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 114    cgcggccgcctcgccgcgct 133
              ||||||||||||||||||||
Sbjct: 318713 cgcggccgcctcgccgcgct 318694

>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 63     ttcgtcgtctgctacggcctcgac 86
              ||||||||| ||||||||||||||
Sbjct: 405301 ttcgtcgtcggctacggcctcgac 405324

>gb|DQ149153.1| Cercopithecine herpesvirus 16 strain X313, complete genome
          Length = 156487

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 113   ccgcggccgcctcgccgcgc 132
             ||||||||||||||||||||
Sbjct: 22694 ccgcggccgcctcgccgcgc 22713

>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome
          Length = 4941439

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 32      gtaggtggtggagccgtcgc 51
               ||||||||||||||||||||
Sbjct: 1128383 gtaggtggtggagccgtcgc 1128402

>gb|U82823.1|SEU82823 Saccharopolyspora erythraea putative carboxypeptidase, putative
            lysozyme, putative Streptomyces subtilisin inhibitor-like
            protein, putative peptidyl-prolyl cis-trans isomerase,
            putative transposase, putative esterase mutated and
            putative erythromycin C-12 hydroxylase genes, complete
            cds
          Length = 8407

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 71   ctgctacggcctcgacgactcgca 94
            ||||||||||||||||||| ||||
Sbjct: 2197 ctgctacggcctcgacgacgcgca 2220

>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 110     cgtccgcggccgcctcgccgcgct 133
               |||||||||||||| |||||||||
Sbjct: 5429759 cgtccgcggccgccacgccgcgct 5429782

>gb|AC148879.2| Chlamydomonas reinhardtii clone cr-36D8, complete sequence
          Length = 53591

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 118   gccgcctcgccgcgctcaag 137
             ||||||||||||||||||||
Sbjct: 13966 gccgcctcgccgcgctcaag 13985


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,091,377
Number of Sequences: 3902068
Number of extensions: 1091377
Number of successful extensions: 88331
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 85075
Number of HSP's gapped (non-prelim): 3255
length of query: 225
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 203
effective length of database: 17,147,199,772
effective search space: 3480881553716
effective search space used: 3480881553716
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)