ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal9k01 |
|---|---|
| Clone Library Name | barley_pub |
>CY561_BOVIN (P10897) Cytochrome b561 (Cytochrome b-561)| Length = 252 Score = 126 bits (316), Expect = 7e-29 Identities = 62/147 (42%), Positives = 89/147 (60%) Frame = +1 Query: 250 MVLVWCIHFRGGLAFEAANKNLIFNVHPVLMLIGFIILGSEAIMVYKVFPGLNHDTAKLT 429 M W +RGG+A+E+A L FNVHP+ M+IG + L +A++VY+VF T K+ Sbjct: 31 MTGAWLGMYRGGIAWESA---LQFNVHPLCMIIGLVFLQGDALLVYRVFRNEAKRTTKVL 87 Query: 430 HLILHAIAIVLGAVGIYCAFKFHNDSGIANLYSLHSWLGIGAISLYGIQWIFGFVTFFFP 609 H +LH A V+ VG+ F+ H G A+LYSLHSW GI +L+ QW+ GF F FP Sbjct: 88 HGLLHVFAFVIALVGLVAVFEHHRKKGYADLYSLHSWCGILVFALFFAQWLVGFSFFLFP 147 Query: 610 GAAPDVRRGALPWHALFGLFVYVLTLA 690 GA+ +R P H FG +++L++A Sbjct: 148 GASFSLRSRYRPQHVFFGAAIFLLSVA 174
>CY561_SHEEP (Q95204) Cytochrome b561 (Cytochrome b-561)| Length = 252 Score = 125 bits (315), Expect = 9e-29 Identities = 62/147 (42%), Positives = 89/147 (60%) Frame = +1 Query: 250 MVLVWCIHFRGGLAFEAANKNLIFNVHPVLMLIGFIILGSEAIMVYKVFPGLNHDTAKLT 429 M W +RGG+A+E+A L FNVHP+ M+IG + L +A++VY+VF T K+ Sbjct: 31 MTGAWLGMYRGGIAWESA---LQFNVHPLCMVIGLVFLQGDALLVYRVFRNEAKRTTKVL 87 Query: 430 HLILHAIAIVLGAVGIYCAFKFHNDSGIANLYSLHSWLGIGAISLYGIQWIFGFVTFFFP 609 H +LH A V+ VG+ F+ H G A+LYSLHSW GI +L+ QW+ GF F FP Sbjct: 88 HGLLHVFAFVIALVGLVAVFEHHRKKGYADLYSLHSWCGILVFALFFAQWLVGFSFFLFP 147 Query: 610 GAAPDVRRGALPWHALFGLFVYVLTLA 690 GA+ +R P H FG +++L++A Sbjct: 148 GASFSLRSRYRPQHVFFGAAIFLLSVA 174
>CY561_PONPY (Q5RCZ2) Cytochrome b561 (Cytochrome b-561)| Length = 251 Score = 124 bits (311), Expect = 3e-28 Identities = 61/146 (41%), Positives = 88/146 (60%) Frame = +1 Query: 250 MVLVWCIHFRGGLAFEAANKNLIFNVHPVLMLIGFIILGSEAIMVYKVFPGLNHDTAKLT 429 M W +RGG+A+E+ +L FN HP+ M+IG I L +A++VY+VF T K+ Sbjct: 30 MTGAWLGLYRGGIAWES---DLQFNAHPLCMVIGLIFLQGDALLVYRVFRNEAKRTTKVL 86 Query: 430 HLILHAIAIVLGAVGIYCAFKFHNDSGIANLYSLHSWLGIGAISLYGIQWIFGFVTFFFP 609 H +LH A+V+ VG+ F +H G A+LYSLHSW GI LY +QW+ GF F FP Sbjct: 87 HGLLHIFALVIALVGLVAVFDYHRKEGYADLYSLHSWCGILVFVLYFVQWLVGFSFFLFP 146 Query: 610 GAAPDVRRGALPWHALFGLFVYVLTL 687 GA+ +R P H FG +++L++ Sbjct: 147 GASFSLRSRYRPQHIFFGATIFLLSV 172
>CY561_PIG (Q95245) Cytochrome b561 (Cytochrome b-561)| Length = 252 Score = 124 bits (310), Expect = 4e-28 Identities = 60/142 (42%), Positives = 87/142 (61%) Frame = +1 Query: 262 WCIHFRGGLAFEAANKNLIFNVHPVLMLIGFIILGSEAIMVYKVFPGLNHDTAKLTHLIL 441 W +RGG+A+E+A L FNVHP+ M+IG + L +A++VY+VF T K+ H +L Sbjct: 35 WLGAYRGGIAWESA---LQFNVHPLCMIIGLVFLQGDALLVYRVFRNEAKRTTKILHGLL 91 Query: 442 HAIAIVLGAVGIYCAFKFHNDSGIANLYSLHSWLGIGAISLYGIQWIFGFVTFFFPGAAP 621 H +A V+ VG+ F +H GIA+LYSLHSW GI L+ QW+ G F FPGA+ Sbjct: 92 HVLAFVIALVGLVAVFDYHRKKGIADLYSLHSWCGILVFVLFLAQWLVGLGFFLFPGASF 151 Query: 622 DVRRGALPWHALFGLFVYVLTL 687 +R P H FG +++L++ Sbjct: 152 SLRSRYRPQHVFFGAAIFLLSV 173
>CY561_HUMAN (P49447) Cytochrome b561 (Cytochrome b-561)| Length = 251 Score = 123 bits (309), Expect = 5e-28 Identities = 61/146 (41%), Positives = 87/146 (59%) Frame = +1 Query: 250 MVLVWCIHFRGGLAFEAANKNLIFNVHPVLMLIGFIILGSEAIMVYKVFPGLNHDTAKLT 429 M W +RGG+A+E+ +L FN HP+ M+IG I L A++VY+VF T K+ Sbjct: 30 MTGAWLGLYRGGIAWES---DLQFNAHPLCMVIGLIFLQGNALLVYRVFRNEAKRTTKVL 86 Query: 430 HLILHAIAIVLGAVGIYCAFKFHNDSGIANLYSLHSWLGIGAISLYGIQWIFGFVTFFFP 609 H +LH A+V+ VG+ F +H G A+LYSLHSW GI LY +QW+ GF F FP Sbjct: 87 HGLLHIFALVIALVGLVAVFDYHRKKGYADLYSLHSWCGILVFVLYFVQWLVGFSFFLFP 146 Query: 610 GAAPDVRRGALPWHALFGLFVYVLTL 687 GA+ +R P H FG +++L++ Sbjct: 147 GASFSLRSRYRPQHIFFGATIFLLSV 172
>CY561_MOUSE (Q60720) Cytochrome b561 (Cytochrome b-561)| Length = 250 Score = 122 bits (307), Expect = 8e-28 Identities = 59/142 (41%), Positives = 86/142 (60%) Frame = +1 Query: 262 WCIHFRGGLAFEAANKNLIFNVHPVLMLIGFIILGSEAIMVYKVFPGLNHDTAKLTHLIL 441 W +RGG+A+E++ L FNVHP+ M+IG I L +A++VY+VF T K+ H +L Sbjct: 33 WLGLYRGGIAWESS---LQFNVHPLCMVIGMIFLQGDALLVYRVFRREAKRTTKILHGLL 89 Query: 442 HAIAIVLGAVGIYCAFKFHNDSGIANLYSLHSWLGIGAISLYGIQWIFGFVTFFFPGAAP 621 H A ++ VG+ F +H G A+LYSLHSW GI LY +QW+ GF F FPGA+ Sbjct: 90 HVFAFIIALVGLVAVFDYHKKKGYADLYSLHSWCGILVFVLYFVQWLVGFSFFLFPGASF 149 Query: 622 DVRRGALPWHALFGLFVYVLTL 687 +R P H FG +++ ++ Sbjct: 150 SLRSRYRPQHIFFGATIFLFSV 171
>CY561_XENLA (Q91577) Cytochrome b561 (Cytochrome b-561)| Length = 247 Score = 113 bits (283), Expect = 5e-25 Identities = 52/126 (41%), Positives = 78/126 (61%) Frame = +1 Query: 313 LIFNVHPVLMLIGFIILGSEAIMVYKVFPGLNHDTAKLTHLILHAIAIVLGAVGIYCAFK 492 L FNVHP+ M++G + L EA++VY+VF + K+ H +LH +A+V+ VG+ F+ Sbjct: 48 LQFNVHPLCMVLGMVFLCGEALLVYRVFRHETKRSTKILHGVLHIMALVISLVGVIAVFQ 107 Query: 493 FHNDSGIANLYSLHSWLGIGAISLYGIQWIFGFVTFFFPGAAPDVRRGALPWHALFGLFV 672 +H +G ++YSLHSW GI +LY +QWI GF FF PG A R P H FG + Sbjct: 108 YHQANGYPDMYSLHSWCGIVTFTLYILQWIIGFSLFFIPGVAFTYRSQFKPLHEFFGRAL 167 Query: 673 YVLTLA 690 ++ ++A Sbjct: 168 FLSSIA 173
>CY561_CAEEL (P34465) Putative cytochrome b561 (Cytochrome b-561)| Length = 266 Score = 112 bits (279), Expect = 1e-24 Identities = 52/151 (34%), Positives = 86/151 (56%), Gaps = 8/151 (5%) Frame = +1 Query: 250 MVLVWCIHFRGGLAFEAANKNLIFNVHPVLMLIGFIILGSEAIMVYKVFPGLNHDTAKLT 429 +V +W F G A+ + + FN HP M++G + L EA++VY+VF +K Sbjct: 38 LVTIWMSKFESGFAWNE-DPDKEFNYHPTFMIMGMVFLFGEALLVYRVFRNERKKFSKTL 96 Query: 430 HLILHAIAIVLGAVGIYCAFKFHN--------DSGIANLYSLHSWLGIGAISLYGIQWIF 585 H+ILH+ +V + + F +HN + I NL SLHSW+G+ + LY Q+I Sbjct: 97 HVILHSCVLVFMLMALKAVFDYHNLHKDPSGNPAPIVNLVSLHSWIGLSVVILYFAQYIV 156 Query: 586 GFVTFFFPGAAPDVRRGALPWHALFGLFVYV 678 GF+T+FFPG +R+ +P+H +FG+ +++ Sbjct: 157 GFITYFFPGMPIPIRQLVMPFHQMFGVLIFI 187
>C56D2_HUMAN (O14569) Cytochrome b561 domain-containing protein 2 (Putative| tumor suppressor protein 101F6) Length = 222 Score = 47.4 bits (111), Expect = 4e-05 Identities = 36/127 (28%), Positives = 59/127 (46%), Gaps = 5/127 (3%) Frame = +1 Query: 316 IFNVHPVLMLIGFIILGSEAIMVYKVFPGLNHDTAK----LTHLILHAIAIVLGAVGIYC 483 +F+ HPVLM + F L +EA++V+ L H ++ H +L +A++ +G+ Sbjct: 44 LFSWHPVLMSLAFSFLMTEALLVFSPESSLLHSLSRKGRARCHWVLQLLALLCALLGLGL 103 Query: 484 AFKFHNDSGIANLYSLHSWLGIGAISLYGIQWIFGFVTFFFPGAAPDVRRGALP-WHALF 660 G A+L + H G+ A+ G+Q G V +P P L +HA Sbjct: 104 VILHKEQLGKAHLVTRHGQAGLLAVLWAGLQ-CSGGVGLLYPKLLPRWPLAKLKLYHATS 162 Query: 661 GLFVYVL 681 GL Y+L Sbjct: 163 GLVGYLL 169
>C56D1_HUMAN (Q8N8Q1) Cytochrome b561 domain-containing protein 1| Length = 229 Score = 46.2 bits (108), Expect = 9e-05 Identities = 35/127 (27%), Positives = 60/127 (47%), Gaps = 5/127 (3%) Frame = +1 Query: 316 IFNVHPVLMLIGFIILGSEAIMVYKVFPGLNHDTAKLTHLILH----AIAIVLGAVGIYC 483 +F+ HPV M + F + +EAI+++ L ++ + LH +AI+ A+G+ Sbjct: 51 LFSWHPVFMALAFCLCMAEAILLFSPEHSLFFFCSRKARIRLHWAGQTLAILCAALGLGF 110 Query: 484 AFKFHNDSGIANLYSLHSWLGIGAISLYGIQWIFGFVTFFFPGAAPDVRRGALP-WHALF 660 S + +L S HSW+G + +Q + G + P AA R L +H Sbjct: 111 IISSRTRSELPHLVSWHSWVGALTLLATAVQALCG-LCLLCPRAARVSRVARLKLYHLTC 169 Query: 661 GLFVYVL 681 GL VY++ Sbjct: 170 GLVVYLM 176
>C56D2_RAT (Q641Y1) Cytochrome b561 domain-containing protein 2| Length = 222 Score = 44.3 bits (103), Expect = 4e-04 Identities = 34/127 (26%), Positives = 58/127 (45%), Gaps = 5/127 (3%) Frame = +1 Query: 316 IFNVHPVLMLIGFIILGSEAIMVY----KVFPGLNHDTAKLTHLILHAIAIVLGAVGIYC 483 +F+ HPVLM + F L +EA++++ + L+ H +L +A++ +G+ Sbjct: 44 LFSWHPVLMSLAFSFLMTEALLMFSPESSLLRSLSRKVRARCHWVLQLLALLCALLGLGL 103 Query: 484 AFKFHNDSGIANLYSLHSWLGIGAISLYGIQWIFGFVTFFFPGAAPDVRRGALP-WHALF 660 G A+L + H G+ A+ G+Q G V +P P L +HA Sbjct: 104 VILHKEQLGKAHLATRHGQAGLLAVLWAGLQ-CSGGVGLLYPKLLPRWPLAKLKLYHATS 162 Query: 661 GLFVYVL 681 GL Y+L Sbjct: 163 GLVGYLL 169
>C56D2_BOVIN (Q5E965) Cytochrome b561 domain-containing protein 2| Length = 222 Score = 44.3 bits (103), Expect = 4e-04 Identities = 35/127 (27%), Positives = 58/127 (45%), Gaps = 5/127 (3%) Frame = +1 Query: 316 IFNVHPVLMLIGFIILGSEAIMVY----KVFPGLNHDTAKLTHLILHAIAIVLGAVGIYC 483 +F+ HPVLM + F L +EA++V+ + L+ H +L +A++ +G+ Sbjct: 44 LFSWHPVLMSLAFSFLMTEALLVFSPESSLLRSLSRKGRARCHWVLQLLALLCALLGLGL 103 Query: 484 AFKFHNDSGIANLYSLHSWLGIGAISLYGIQWIFGFVTFFFPGAAPDVRRGALP-WHALF 660 G A+L + H G+ A+ G+Q G V +P P L +HA Sbjct: 104 VILHKEQLGKAHLATWHGRAGLLAVLWAGLQ-CSGGVGLLYPKLLPRWPLAKLKLYHATS 162 Query: 661 GLFVYVL 681 GL Y+L Sbjct: 163 GLVGYLL 169
>C56D2_MOUSE (Q9WUE3) Cytochrome b561 domain-containing protein 2 (Putative| tumor suppressor protein 101F6) Length = 222 Score = 43.1 bits (100), Expect = 8e-04 Identities = 33/127 (25%), Positives = 58/127 (45%), Gaps = 5/127 (3%) Frame = +1 Query: 316 IFNVHPVLMLIGFIILGSEAIMVY----KVFPGLNHDTAKLTHLILHAIAIVLGAVGIYC 483 +F+ HPVLM + F L +EA++++ + L+ H +L +A++ +G+ Sbjct: 44 LFSWHPVLMSLAFSFLMTEALLMFSPESSLLRSLSRKVRARCHWVLQLLALLCALLGLGL 103 Query: 484 AFKFHNDSGIANLYSLHSWLGIGAISLYGIQWIFGFVTFFFPGAAPDVRRGALP-WHALF 660 G A+L + H G+ A+ G+Q G + +P P L +HA Sbjct: 104 VILHKEQLGKAHLTTRHGQAGLLAVLWAGLQ-CSGGMGLLYPKLLPRWPLAKLKLYHATS 162 Query: 661 GLFVYVL 681 GL Y+L Sbjct: 163 GLVGYLL 169
>5HT2C_RAT (P08909) 5-hydroxytryptamine 2C receptor (5-HT-2C) (Serotonin| receptor 2C) (5-HT2C) (5-HTR2C) (5HT-1C) Length = 460 Score = 30.8 bits (68), Expect = 4.1 Identities = 26/105 (24%), Positives = 44/105 (41%), Gaps = 4/105 (3%) Frame = +1 Query: 94 GRECAAPAPTGDQRKKKKEEDAGVRGEMAIALGVKATPFTYXXXXXXXXXXXMVLVWCIH 273 G E AP P DQ+ ++K+++ RG M K +++WC Sbjct: 275 GEEENAPNPNPDQKPRRKKKEKRPRGTMQAINNEKK-----ASKVLGIVFFVFLIMWCPF 329 Query: 274 F----RGGLAFEAANKNLIFNVHPVLMLIGFIILGSEAIMVYKVF 396 F L +A N+ L+ + V + IG++ G +VY +F Sbjct: 330 FITNILSVLCGKACNQKLMEKLLNVFVWIGYVCSGINP-LVYTLF 373
>RSSA_ECHGR (P46770) 40S ribosomal protein SA (p40) (Laminin-binding protein)| Length = 268 Score = 30.4 bits (67), Expect = 5.3 Identities = 15/40 (37%), Positives = 19/40 (47%) Frame = -3 Query: 684 REHVDEEPEQRVPRQSPAPHVRRRAGEEEGHEPEYPLDSV 565 REHVDE PE P + + E PE+P +SV Sbjct: 204 REHVDEPPEGPEGEAQEPPFEQGKFDAAEAEAPEWPAESV 243
>ABP1_SACEX (P38479) Actin-binding protein| Length = 617 Score = 30.4 bits (67), Expect = 5.3 Identities = 15/50 (30%), Positives = 22/50 (44%) Frame = -3 Query: 687 QREHVDEEPEQRVPRQSPAPHVRRRAGEEEGHEPEYPLDSVERNGPDPEP 538 + E +E P +P ++ AP +EE E E P S+ G P P Sbjct: 495 EEEEEEEAPAPSLPSRNAAPEPEPEQPQEEEEEEEAPAPSLPSRGSVPPP 544
>NORB_PSEAE (Q59647) Nitric-oxide reductase subunit B (EC 1.7.99.7) (Nitric| oxide reductase cytochrome b subunit) (NOR large subunit) Length = 466 Score = 30.0 bits (66), Expect = 6.9 Identities = 26/118 (22%), Positives = 51/118 (43%), Gaps = 5/118 (4%) Frame = +1 Query: 280 GGLAFEAANKNLIFNVHPVLMLIGFIILGSEAIMVYKV----FPGLNHDTAKLTHLILHA 447 G L F + + V +++ +G I+ G + Y V FP + + A++ H L Sbjct: 6 GSLKFASQAVAKPYFVFALILFVGQILFGLIMGLQYVVGDFLFPAIPFNVARMVHTNLLI 65 Query: 448 IAIVLGAVGIYCAFKFHNDSGIANLYSLH-SWLGIGAISLYGIQWIFGFVTFFFPGAA 618 + ++ G +G A+ + LYS +W+ + G+ I G++ + G A Sbjct: 66 VWLLFGFMG--AAYYLVPEESDCELYSPKLAWILFWVFAAAGVLTILGYLLVPYAGLA 121
>RPOP_MAIZE (P10581) Probable DNA-directed RNA polymerase (EC 2.7.7.6) (S-2 DNA| ORF1) Length = 1098 Score = 29.6 bits (65), Expect = 9.1 Identities = 14/48 (29%), Positives = 26/48 (54%) Frame = -3 Query: 438 DQVGQLGSIVVQSRKYLVDHYGFTAEDNETDQHKNRVDVEDEVLVGRL 295 D + ++G ++ K+L DH A NE Q+K+ VE+ ++ R+ Sbjct: 933 DSIFRMGHPLIIINKFLFDHILIPAIQNEHPQNKHLFSVEERSMLDRM 980
>BEGIN_SHEEP (Q6R6L0) Brain-enriched guanylate kinase-associated protein| Length = 653 Score = 29.6 bits (65), Expect = 9.1 Identities = 25/87 (28%), Positives = 41/87 (47%), Gaps = 6/87 (6%) Frame = -1 Query: 656 SACHGRAPRLTSGAAPGKKKVTNPNIHWIP*REMAPIPSQECKL*RFA------MPLSLW 495 +A +G +PR + AA + P R ++P P + + MP +LW Sbjct: 394 AAAYGSSPRYAAAAAAVAAPLEAAMAPGFP-RTVSPFPGEPFRFPLSPGPQPALMPPNLW 452 Query: 494 NLKAQ*IPTAPRTMAIAWRIRWVSLAV 414 NL+A+ P + R +A A R +W L+V Sbjct: 453 NLRAK--PGSARLVAGAGRGQWRPLSV 477 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 74,271,727 Number of Sequences: 219361 Number of extensions: 1458049 Number of successful extensions: 5325 Number of sequences better than 10.0: 19 Number of HSP's better than 10.0 without gapping: 5043 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5281 length of database: 80,573,946 effective HSP length: 109 effective length of database: 56,663,597 effective search space used: 6856295237 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
