ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal9j23
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 52 0.001
2gb|AC090484.4| Genomic sequence for Oryza sativa, Nipponbare str... 52 0.001
3dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 52 0.001
4dbj|AK069179.1| Oryza sativa (japonica cultivar-group) cDNA clon... 52 0.001
5gb|AE017135.1| Yersinia pestis biovar Medievalis str. 91001 sect... 44 0.23
6gb|AE009952.1| Yersinia pestis KIM, complete genome 44 0.23
7emb|BX936398.1| Yersinia pseudotuberculosis IP32953 genome, comp... 44 0.23
8emb|AJ414152.1| Yersinia pestis strain CO92 complete genome; seg... 44 0.23
9emb|CT030739.10| Mouse DNA sequence from clone RP24-496K8 on chr... 44 0.23
10ref|XM_417662.1| PREDICTED: Gallus gallus similar to Dual specif... 42 0.89
11emb|BX931306.1| Gallus gallus finished cDNA, clone ChEST334j18 42 0.89
12gb|BC085153.1| Mus musculus expressed sequence AI480556, mRNA (c... 40 3.5
13gb|BC059177.1| Mus musculus zinc finger and BTB domain containin... 40 3.5
14ref|XM_512825.1| PREDICTED: Pan troglodytes similar to serine ar... 40 3.5
15ref|XM_463822.1| Oryza sativa (japonica cultivar-group), mRNA 40 3.5
16gb|U29154.1| Caenorhabditis elegans cosmid T07F12, complete sequ... 40 3.5
17gb|BC081670.1| Danio rerio cDNA clone IMAGE:7071499 40 3.5
18gb|AC008308.9| Drosophila melanogaster clone BACR10M16, complete... 40 3.5
19gb|AC099308.2| Drosophila melanogaster clone BACR11M14, complete... 40 3.5
20ref|XM_958580.1| Neurospora crassa OR74A hypothetical protein ( ... 40 3.5
21ref|XM_959396.1| Neurospora crassa OR74A hypothetical protein (N... 40 3.5
22ref|XM_327117.1| Neurospora crassa OR74A hypothetical protein ( ... 40 3.5
23ref|XM_330747.1| Neurospora crassa OR74A hypothetical protein (N... 40 3.5
24ref|XM_913925.2| PREDICTED: Mus musculus similar to zinc finger ... 40 3.5
25gb|AC132340.3| Mus musculus BAC clone RP24-166O10 from chromosom... 40 3.5
26ref|XM_801969.1| Trypanosoma cruzi strain CL Brener hypothetical... 40 3.5
27ref|XM_803819.1| Trypanosoma cruzi strain CL Brener hypothetical... 40 3.5
28gb|BC043138.1| Mus musculus expressed sequence AI480556, mRNA (c... 40 3.5
29gb|AY163380.1| Zea mays putative ROP family GTPase ROP6 gene, co... 40 3.5
30gb|AC126256.4| Mus musculus BAC clone RP24-235B15 from chromosom... 40 3.5
31gb|BC054818.1| Mus musculus expressed sequence AI480556, mRNA (c... 40 3.5
32emb|AL683870.15| Human DNA sequence from clone RP11-261P4 on chr... 40 3.5
33emb|AL669993.1|NCB23D6 Neurospora crassa DNA linkage group II BA... 40 3.5
34emb|AL356173.2|NCB14D6 Neurospora crassa DNA linkage group II BA... 40 3.5
35emb|CR925780.8| Zebrafish DNA sequence from clone CH211-112B19 i... 40 3.5
36emb|AL713924.12| Mouse DNA sequence from clone RP23-443J11 on ch... 40 3.5
37gb|BC095624.1| Danio rerio zgc:111967, mRNA (cDNA clone MGC:1119... 40 3.5
38emb|BX927204.6| Zebrafish DNA sequence from clone CH211-103B12 i... 40 3.5
39gb|AC161805.4| Mus musculus chromosome 1, clone RP24-325N3, comp... 40 3.5
40gb|AC011495.8| Homo sapiens chromosome 19 clone CTB-33G10, compl... 40 3.5
41dbj|AK220256.1| Mus musculus mRNA for mKIAA0478 protein 40 3.5
42ref|NM_176583.1| Drosophila melanogaster CG11500-RA (CG11500), mRNA 40 3.5
43ref|NM_143436.1| Drosophila melanogaster CG2006-RA (CG2006), mRNA 40 3.5
44gb|AY094805.1| Drosophila melanogaster LD27084 full insert cDNA 40 3.5
45ref|NM_001008422.1| Mus musculus expressed sequence AI480556 (AI... 40 3.5
46dbj|AK029098.1| Mus musculus 10 days neonate skin cDNA, RIKEN fu... 40 3.5
47ref|NM_001020758.1| Danio rerio zgc:111967 (zgc:111967), mRNA 40 3.5
48dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 3.5
49gb|AC011706.14|AC011706 Drosophila melanogaster, chromosome X, r... 40 3.5
50gb|AC009344.8|AC009344 Drosophila melanogaster, chromosome 3R, r... 40 3.5
51ref|NM_019384.1| Rattus norvegicus CTD-binding SR-like rA1 (LOC5... 40 3.5
52gb|AF254411.1|AF254411 Homo sapiens ser/arg-rich pre-mRNA splici... 40 3.5
53dbj|AP004752.3| Oryza sativa (japonica cultivar-group) genomic D... 40 3.5
54dbj|AK024444.1| Homo sapiens mRNA for FLJ00034 protein, partial cds 40 3.5
55ref|NM_208431.1| Eremothecium gossypii ABR131Wp (ABR131W), mRNA 40 3.5
56gb|BC053992.1| Homo sapiens serine arginine-rich pre-mRNA splici... 40 3.5
57gb|AC009888.1|AC009888 Drosophila melanogaster, chromosome 3R, r... 40 3.5
58gb|AE003733.3| Drosophila melanogaster chromosome 3R, section 71... 40 3.5
59gb|AE003769.2| Drosophila melanogaster chromosome 3R, section 10... 40 3.5
60gb|AE003570.4| Drosophila melanogaster chromosome X, section 69 ... 40 3.5
61gb|AC138277.16| Mus musculus chromosome 1, clone RP23-67I1, comp... 40 3.5
62dbj|AB100882.1| Ralstonia solanacearum genes for PopA, PopB, Pop... 40 3.5
63gb|U49056.1|RNU49056 Rattus norvegicus CTD-binding SR-like prote... 40 3.5
64gb|AC167692.2| Daphnia pulex clone JGIAZSN-5P10, complete sequence 40 3.5
65emb|CR847941.14| Zebrafish DNA sequence from clone CH211-275J6 i... 40 3.5
66gb|AC111124.8| Mus musculus chromosome 7, clone RP23-331A21, com... 40 3.5
67gb|BC079873.1| Mus musculus cDNA clone IMAGE:6832729, containing... 40 3.5
68ref|NM_198248.1| Mus musculus zinc finger and BTB domain contain... 40 3.5
69gb|AE016815.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10... 40 3.5
70ref|NM_021228.1| Homo sapiens serine arginine-rich pre-mRNA spli... 40 3.5
71emb|AL671011.9| Mouse DNA sequence from clone RP23-95O23 on chro... 40 3.5
72gb|BC042576.1| Mus musculus expressed sequence AI480556, mRNA (c... 40 3.5 
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 32/34 (94%)
 Strand = Plus / Minus

                                                 
Query: 238     tggcgatgctgcacctgatgatggcgctggcctt 271
               ||||||||||||| ||| ||||||||||||||||
Sbjct: 3981360 tggcgatgctgcagctgctgatggcgctggcctt 3981327
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>gb|AC090484.4| Genomic sequence for Oryza sativa, Nipponbare strain, clone
              OSJNBa0061L19, from chromosome 3, complete sequence
          Length = 153322

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 32/34 (94%)
 Strand = Plus / Plus

                                                
Query: 238    tggcgatgctgcacctgatgatggcgctggcctt 271
              ||||||||||||| ||| ||||||||||||||||
Sbjct: 118008 tggcgatgctgcagctgctgatggcgctggcctt 118041
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 32/34 (94%)
 Strand = Plus / Minus

                                                 
Query: 238     tggcgatgctgcacctgatgatggcgctggcctt 271
               ||||||||||||| ||| ||||||||||||||||
Sbjct: 3981471 tggcgatgctgcagctgctgatggcgctggcctt 3981438
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>dbj|AK069179.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023009A03, full
           insert sequence
          Length = 939

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 32/34 (94%)
 Strand = Plus / Plus

                                             
Query: 238 tggcgatgctgcacctgatgatggcgctggcctt 271
           ||||||||||||| ||| ||||||||||||||||
Sbjct: 347 tggcgatgctgcagctgctgatggcgctggcctt 380
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>gb|AE017135.1| Yersinia pestis biovar Medievalis str. 91001 section 9 of 16 of the
             complete genome
          Length = 291326

 Score = 44.1 bits (22), Expect = 0.23
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 114   gccatccatataactctcacct 135
             ||||||||||||||||||||||
Sbjct: 97989 gccatccatataactctcacct 97968
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>gb|AE009952.1| Yersinia pestis KIM, complete genome
          Length = 4600755

 Score = 44.1 bits (22), Expect = 0.23
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 114     gccatccatataactctcacct 135
               ||||||||||||||||||||||
Sbjct: 2149012 gccatccatataactctcacct 2149033
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>emb|BX936398.1| Yersinia pseudotuberculosis IP32953 genome, complete sequence
          Length = 4744671

 Score = 44.1 bits (22), Expect = 0.23
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 114     gccatccatataactctcacct 135
               ||||||||||||||||||||||
Sbjct: 2717586 gccatccatataactctcacct 2717565
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>emb|AJ414152.1| Yersinia pestis strain CO92 complete genome; segment 12/20
          Length = 313050

 Score = 44.1 bits (22), Expect = 0.23
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 114   gccatccatataactctcacct 135
             ||||||||||||||||||||||
Sbjct: 85247 gccatccatataactctcacct 85226
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>emb|CT030739.10| Mouse DNA sequence from clone RP24-496K8 on chromosome 13, complete
             sequence
          Length = 192075

 Score = 44.1 bits (22), Expect = 0.23
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 9     ctccaccaaccaccaactccaa 30
             ||||||||||||||||||||||
Sbjct: 91340 ctccaccaaccaccaactccaa 91361
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>ref|XM_417662.1| PREDICTED: Gallus gallus similar to Dual specificity phosphatase 11
           (RNA/RNP complex 1-interacting) (LOC419511), mRNA
          Length = 1413

 Score = 42.1 bits (21), Expect = 0.89
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 165 caagaagaagaagaagcggca 185
           |||||||||||||||||||||
Sbjct: 771 caagaagaagaagaagcggca 791
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>emb|BX931306.1| Gallus gallus finished cDNA, clone ChEST334j18
          Length = 1437

 Score = 42.1 bits (21), Expect = 0.89
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 165 caagaagaagaagaagcggca 185
           |||||||||||||||||||||
Sbjct: 794 caagaagaagaagaagcggca 814
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>gb|BC085153.1| Mus musculus expressed sequence AI480556, mRNA (cDNA clone MGC:109685
            IMAGE:6837651), complete cds
          Length = 4195

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 163  ggcaagaagaagaagaagcg 182
            ||||||||||||||||||||
Sbjct: 1983 ggcaagaagaagaagaagcg 2002
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>gb|BC059177.1| Mus musculus zinc finger and BTB domain containing 40, mRNA (cDNA
            clone MGC:62412 IMAGE:6410689), complete cds
          Length = 7208

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 165  caagaagaagaagaagcggc 184
            ||||||||||||||||||||
Sbjct: 2545 caagaagaagaagaagcggc 2564
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>ref|XM_512825.1| PREDICTED: Pan troglodytes similar to serine arginine-rich pre-mRNA
            splicing factor SR-A1 (LOC456211), mRNA
          Length = 5217

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 164  gcaagaagaagaagaagcgg 183
            ||||||||||||||||||||
Sbjct: 1610 gcaagaagaagaagaagcgg 1629
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>ref|XM_463822.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 564

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 166 aagaagaagaagaagcggca 185
           ||||||||||||||||||||
Sbjct: 283 aagaagaagaagaagcggca 302
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>gb|U29154.1| Caenorhabditis elegans cosmid T07F12, complete sequence
          Length = 26663

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 166  aagaagaagaagaagcggca 185
            ||||||||||||||||||||
Sbjct: 8767 aagaagaagaagaagcggca 8748
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>gb|BC081670.1| Danio rerio cDNA clone IMAGE:7071499
          Length = 1163

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 165 caagaagaagaagaagcggc 184
           ||||||||||||||||||||
Sbjct: 345 caagaagaagaagaagcggc 364
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>gb|AC008308.9| Drosophila melanogaster clone BACR10M16, complete sequence
          Length = 196423

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 166    aagaagaagaagaagcggca 185
              ||||||||||||||||||||
Sbjct: 131941 aagaagaagaagaagcggca 131960
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>gb|AC099308.2| Drosophila melanogaster clone BACR11M14, complete sequence
          Length = 173097

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 166    aagaagaagaagaagcggca 185
              ||||||||||||||||||||
Sbjct: 172551 aagaagaagaagaagcggca 172532
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>ref|XM_958580.1| Neurospora crassa OR74A hypothetical protein ( kinesin-like protein
            Kif21a related protein [imported] - Neurospora crassa
            OR74A  ) (NCU06832.1) partial mRNA
          Length = 5268

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 161  cgggcaagaagaagaagaag 180
            ||||||||||||||||||||
Sbjct: 5228 cgggcaagaagaagaagaag 5247
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>ref|XM_959396.1| Neurospora crassa OR74A hypothetical protein (NCU03312.1) partial
           mRNA
          Length = 2469

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 161 cgggcaagaagaagaagaag 180
           ||||||||||||||||||||
Sbjct: 110 cgggcaagaagaagaagaag 129
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>ref|XM_327117.1| Neurospora crassa OR74A hypothetical protein ( kinesin-like protein
            Kif21a related protein [imported] - Neurospora crassa
            OR74A  ) (NCU06832.1) partial mRNA
          Length = 5268

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 161  cgggcaagaagaagaagaag 180
            ||||||||||||||||||||
Sbjct: 5228 cgggcaagaagaagaagaag 5247
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>ref|XM_330747.1| Neurospora crassa OR74A hypothetical protein (NCU03312.1) partial
           mRNA
          Length = 2469

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 161 cgggcaagaagaagaagaag 180
           ||||||||||||||||||||
Sbjct: 110 cgggcaagaagaagaagaag 129
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>ref|XM_913925.2| PREDICTED: Mus musculus similar to zinc finger and BTB domain
            containing 40 (LOC638050), mRNA
          Length = 6309

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 165  caagaagaagaagaagcggc 184
            ||||||||||||||||||||
Sbjct: 1671 caagaagaagaagaagcggc 1690
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>gb|AC132340.3| Mus musculus BAC clone RP24-166O10 from chromosome 1, complete sequence
          Length = 146111

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 166    aagaagaagaagaagcggca 185
              ||||||||||||||||||||
Sbjct: 119285 aagaagaagaagaagcggca 119304
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>ref|XM_801969.1| Trypanosoma cruzi strain CL Brener hypothetical protein
           (Tc00.1047053509793.20) partial mRNA
          Length = 1020

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 164 gcaagaagaagaagaagcgg 183
           ||||||||||||||||||||
Sbjct: 734 gcaagaagaagaagaagcgg 753
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>ref|XM_803819.1| Trypanosoma cruzi strain CL Brener hypothetical protein
           (Tc00.1047053508719.50) partial mRNA
          Length = 600

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 164 gcaagaagaagaagaagcgg 183
           ||||||||||||||||||||
Sbjct: 461 gcaagaagaagaagaagcgg 480
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>gb|BC043138.1| Mus musculus expressed sequence AI480556, mRNA (cDNA clone
            IMAGE:6821344), containing frame-shift errors
          Length = 4233

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 163  ggcaagaagaagaagaagcg 182
            ||||||||||||||||||||
Sbjct: 2013 ggcaagaagaagaagaagcg 2032
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>gb|AY163380.1| Zea mays putative ROP family GTPase ROP6 gene, complete cds
          Length = 2031

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 166 aagaagaagaagaagcggca 185
           ||||||||||||||||||||
Sbjct: 489 aagaagaagaagaagcggca 470
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>gb|AC126256.4| Mus musculus BAC clone RP24-235B15 from chromosome 7, complete sequence
          Length = 188677

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 163   ggcaagaagaagaagaagcg 182
             ||||||||||||||||||||
Sbjct: 51820 ggcaagaagaagaagaagcg 51801
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>gb|BC054818.1| Mus musculus expressed sequence AI480556, mRNA (cDNA clone
            IMAGE:4527847), partial cds
          Length = 6474

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 163  ggcaagaagaagaagaagcg 182
            ||||||||||||||||||||
Sbjct: 4263 ggcaagaagaagaagaagcg 4282
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>emb|AL683870.15| Human DNA sequence from clone RP11-261P4 on chromosome X Contains the 3'
              end of the IL3RA gene for interleukin 3 receptor, alpha
              (low affinity) (IL3R, CD123, IL3RX, IL3RY, IL3RAY, hIL-3Ra,
              MGC34174), the SLC25A6 gene for solute carrier family 25
              (mitochondrial carrier; adenine nucleotide translocator),
              member 6 (ANT3, ANT3Y, MGC17525), the ASMTL gene for
              acetylserotonin O-methyltransferase-like (ASMTLX), a novel
              gene (LOC286530), a novel gene (FLJ13330) and six CpG
              islands, complete sequence
          Length = 162377

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 166    aagaagaagaagaagcggca 185
              ||||||||||||||||||||
Sbjct: 105691 aagaagaagaagaagcggca 105710
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>emb|AL669993.1|NCB23D6 Neurospora crassa DNA linkage group II BAC clone B23D6
          Length = 65197

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 161   cgggcaagaagaagaagaag 180
             ||||||||||||||||||||
Sbjct: 38354 cgggcaagaagaagaagaag 38335
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>emb|AL356173.2|NCB14D6 Neurospora crassa DNA linkage group II BAC contig B14D6
          Length = 199386

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 161  cgggcaagaagaagaagaag 180
            ||||||||||||||||||||
Sbjct: 2628 cgggcaagaagaagaagaag 2609
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>emb|CR925780.8| Zebrafish DNA sequence from clone CH211-112B19 in linkage group 5,
             complete sequence
          Length = 166407

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 165   caagaagaagaagaagcggc 184
             ||||||||||||||||||||
Sbjct: 90481 caagaagaagaagaagcggc 90462
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>emb|AL713924.12| Mouse DNA sequence from clone RP23-443J11 on chromosome 11, complete
             sequence
          Length = 35632

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 166   aagaagaagaagaagcggca 185
             ||||||||||||||||||||
Sbjct: 12195 aagaagaagaagaagcggca 12214
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>gb|BC095624.1| Danio rerio zgc:111967, mRNA (cDNA clone MGC:111967 IMAGE:7275886),
           complete cds
          Length = 1140

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 165 caagaagaagaagaagcggc 184
           ||||||||||||||||||||
Sbjct: 322 caagaagaagaagaagcggc 341
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>emb|BX927204.6| Zebrafish DNA sequence from clone CH211-103B12 in linkage group 23,
             complete sequence
          Length = 165759

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 166   aagaagaagaagaagcggca 185
             ||||||||||||||||||||
Sbjct: 53502 aagaagaagaagaagcggca 53521
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>gb|AC161805.4| Mus musculus chromosome 1, clone RP24-325N3, complete sequence
          Length = 192649

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 18     ccaccaactccaatccacca 37
              ||||||||||||||||||||
Sbjct: 166857 ccaccaactccaatccacca 166838
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>gb|AC011495.8| Homo sapiens chromosome 19 clone CTB-33G10, complete sequence
          Length = 209844

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 164   gcaagaagaagaagaagcgg 183
             ||||||||||||||||||||
Sbjct: 78118 gcaagaagaagaagaagcgg 78137
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>dbj|AK220256.1| Mus musculus mRNA for mKIAA0478 protein
          Length = 7071

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 165  caagaagaagaagaagcggc 184
            ||||||||||||||||||||
Sbjct: 2430 caagaagaagaagaagcggc 2449
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>ref|NM_176583.1| Drosophila melanogaster CG11500-RA (CG11500), mRNA
          Length = 438

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 162 gggcaagaagaagaagaagc 181
           ||||||||||||||||||||
Sbjct: 329 gggcaagaagaagaagaagc 348
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>ref|NM_143436.1| Drosophila melanogaster CG2006-RA (CG2006), mRNA
          Length = 1890

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 162  gggcaagaagaagaagaagc 181
            ||||||||||||||||||||
Sbjct: 1159 gggcaagaagaagaagaagc 1140
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>gb|AY094805.1| Drosophila melanogaster LD27084 full insert cDNA
          Length = 1698

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 162 gggcaagaagaagaagaagc 181
           ||||||||||||||||||||
Sbjct: 949 gggcaagaagaagaagaagc 930
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>ref|NM_001008422.1| Mus musculus expressed sequence AI480556 (AI480556), mRNA
          Length = 4195

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 163  ggcaagaagaagaagaagcg 182
            ||||||||||||||||||||
Sbjct: 1983 ggcaagaagaagaagaagcg 2002
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>dbj|AK029098.1| Mus musculus 10 days neonate skin cDNA, RIKEN full-length enriched
            library, clone:4732491G18 product:unclassifiable, full
            insert sequence
          Length = 3456

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 78   tcaccaccaccacaagagga 97
            ||||||||||||||||||||
Sbjct: 3419 tcaccaccaccacaagagga 3438
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>ref|NM_001020758.1| Danio rerio zgc:111967 (zgc:111967), mRNA
          Length = 1140

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 165 caagaagaagaagaagcggc 184
           ||||||||||||||||||||
Sbjct: 322 caagaagaagaagaagcggc 341
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2,
              complete sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 166    aagaagaagaagaagcggca 185
              ||||||||||||||||||||
Sbjct: 559684 aagaagaagaagaagcggca 559703
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>gb|AC011706.14|AC011706 Drosophila melanogaster, chromosome X, region 19E-19E, BAC clone
              BACR03J18, complete sequence
          Length = 161614

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 166    aagaagaagaagaagcggca 185
              ||||||||||||||||||||
Sbjct: 135779 aagaagaagaagaagcggca 135798
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>gb|AC009344.8|AC009344 Drosophila melanogaster, chromosome 3R, region 93A-93B, BAC clone
              BACR20N14, complete sequence
          Length = 173634

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 166    aagaagaagaagaagcggca 185
              ||||||||||||||||||||
Sbjct: 157719 aagaagaagaagaagcggca 157700
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>ref|NM_019384.1| Rattus norvegicus CTD-binding SR-like rA1 (LOC56081), mRNA
          Length = 3851

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 163  ggcaagaagaagaagaagcg 182
            ||||||||||||||||||||
Sbjct: 1660 ggcaagaagaagaagaagcg 1679
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>gb|AF254411.1|AF254411 Homo sapiens ser/arg-rich pre-mRNA splicing factor SR-A1 (SR-A1) gene,
             complete cds
          Length = 18497

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 164   gcaagaagaagaagaagcgg 183
             ||||||||||||||||||||
Sbjct: 12043 gcaagaagaagaagaagcgg 12062
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>dbj|AP004752.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0501G04
          Length = 156603

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 166   aagaagaagaagaagcggca 185
             ||||||||||||||||||||
Sbjct: 37737 aagaagaagaagaagcggca 37756
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>dbj|AK024444.1| Homo sapiens mRNA for FLJ00034 protein, partial cds
          Length = 4305

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 164  gcaagaagaagaagaagcgg 183
            ||||||||||||||||||||
Sbjct: 2043 gcaagaagaagaagaagcgg 2062
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>ref|NM_208431.1| Eremothecium gossypii ABR131Wp (ABR131W), mRNA
          Length = 1785

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 164 gcaagaagaagaagaagcgg 183
           ||||||||||||||||||||
Sbjct: 173 gcaagaagaagaagaagcgg 192
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>gb|BC053992.1| Homo sapiens serine arginine-rich pre-mRNA splicing factor SR-A1,
            mRNA (cDNA clone MGC:45499 IMAGE:5578439), complete cds
          Length = 4207

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 164  gcaagaagaagaagaagcgg 183
            ||||||||||||||||||||
Sbjct: 1930 gcaagaagaagaagaagcgg 1949
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>gb|AC009888.1|AC009888 Drosophila melanogaster, chromosome 3R, region 99A7-99B5, BAC clones
              BACR48K01 and BACR48O23, complete sequence
          Length = 311043

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 162    gggcaagaagaagaagaagc 181
              ||||||||||||||||||||
Sbjct: 205976 gggcaagaagaagaagaagc 205957
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>gb|AE003733.3| Drosophila melanogaster chromosome 3R, section 71 of 118 of the complete
              sequence
          Length = 235707

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 166    aagaagaagaagaagcggca 185
              ||||||||||||||||||||
Sbjct: 226008 aagaagaagaagaagcggca 225989
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>gb|AE003769.2| Drosophila melanogaster chromosome 3R, section 107 of 118 of the complete
              sequence
          Length = 234024

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 162    gggcaagaagaagaagaagc 181
              ||||||||||||||||||||
Sbjct: 214884 gggcaagaagaagaagaagc 214865
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>gb|AE003570.4| Drosophila melanogaster chromosome X, section 69 of 74 of the complete
              sequence
          Length = 300051

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 166    aagaagaagaagaagcggca 185
              ||||||||||||||||||||
Sbjct: 240144 aagaagaagaagaagcggca 240163
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>gb|AC138277.16| Mus musculus chromosome 1, clone RP23-67I1, complete sequence
          Length = 216155

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 18    ccaccaactccaatccacca 37
             ||||||||||||||||||||
Sbjct: 12465 ccaccaactccaatccacca 12446
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>dbj|AB100882.1| Ralstonia solanacearum genes for PopA, PopB, PopC, cpmplete cds
          Length = 4697

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 163  ggcaagaagaagaagaagcg 182
            ||||||||||||||||||||
Sbjct: 1423 ggcaagaagaagaagaagcg 1442
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>gb|U49056.1|RNU49056 Rattus norvegicus CTD-binding SR-like protein rA1 mRNA, complete cds
          Length = 3851

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 163  ggcaagaagaagaagaagcg 182
            ||||||||||||||||||||
Sbjct: 1660 ggcaagaagaagaagaagcg 1679
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>gb|AC167692.2| Daphnia pulex clone JGIAZSN-5P10, complete sequence
          Length = 37609

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 236   gctggcgatgctgcacctga 255
             ||||||||||||||||||||
Sbjct: 30677 gctggcgatgctgcacctga 30658
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>emb|CR847941.14| Zebrafish DNA sequence from clone CH211-275J6 in linkage group 5,
              complete sequence
          Length = 151835

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 165    caagaagaagaagaagcggc 184
              ||||||||||||||||||||
Sbjct: 111412 caagaagaagaagaagcggc 111393
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>gb|AC111124.8| Mus musculus chromosome 7, clone RP23-331A21, complete sequence
          Length = 228220

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 78     tcaccaccaccacaagagga 97
              ||||||||||||||||||||
Sbjct: 167142 tcaccaccaccacaagagga 167123
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>gb|BC079873.1| Mus musculus cDNA clone IMAGE:6832729, containing frame-shift errors
          Length = 4229

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 163  ggcaagaagaagaagaagcg 182
            ||||||||||||||||||||
Sbjct: 2001 ggcaagaagaagaagaagcg 2020
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>ref|NM_198248.1| Mus musculus zinc finger and BTB domain containing 40 (Zbtb40), mRNA
          Length = 7208

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 165  caagaagaagaagaagcggc 184
            ||||||||||||||||||||
Sbjct: 2545 caagaagaagaagaagcggc 2564
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>gb|AE016815.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome II,
              complete sequence
          Length = 867699

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 164    gcaagaagaagaagaagcgg 183
              ||||||||||||||||||||
Sbjct: 641806 gcaagaagaagaagaagcgg 641825
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>ref|NM_021228.1| Homo sapiens serine arginine-rich pre-mRNA splicing factor SR-A1
            (SR-A1), mRNA
          Length = 4207

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 164  gcaagaagaagaagaagcgg 183
            ||||||||||||||||||||
Sbjct: 1930 gcaagaagaagaagaagcgg 1949
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>emb|AL671011.9| Mouse DNA sequence from clone RP23-95O23 on chromosome 4, complete
            sequence
          Length = 226950

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 165  caagaagaagaagaagcggc 184
            ||||||||||||||||||||
Sbjct: 5932 caagaagaagaagaagcggc 5913
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>gb|BC042576.1| Mus musculus expressed sequence AI480556, mRNA (cDNA clone MGC:25611
            IMAGE:4160122), complete cds
          Length = 4052

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 163  ggcaagaagaagaagaagcg 182
            ||||||||||||||||||||
Sbjct: 1841 ggcaagaagaagaagaagcg 1860


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,019,813
Number of Sequences: 3902068
Number of extensions: 3019813
Number of successful extensions: 664555
Number of sequences better than 10.0: 72
Number of HSP's better than 10.0 without gapping: 72
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 663710
Number of HSP's gapped (non-prelim): 845
length of query: 271
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 249
effective length of database: 17,147,199,772
effective search space: 4269652743228
effective search space used: 4269652743228
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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