ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal9j17
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1BAR3_CHITE (Q03376) Balbiani ring protein 3 precursor 28 5.4
2Z3H7A_HUMAN (Q8IWR0) Zinc finger CCCH-type domain-containing pro... 28 5.4

>BAR3_CHITE (Q03376) Balbiani ring protein 3 precursor|
          Length = 1700

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 11/20 (55%), Positives = 15/20 (75%)
 Frame = +2

Query: 170  LLTFSANTCSVSAPAAKAKP 229
            ++ ++ANTCS   PA KAKP
Sbjct: 1286 VMKWNANTCSCECPADKAKP 1305



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>Z3H7A_HUMAN (Q8IWR0) Zinc finger CCCH-type domain-containing protein 7A|
          Length = 971

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = -3

Query: 137 LSSQLCPRLLVDAVIFVCGQCLYNGLI 57
           L +Q+ P  L   + FVC QCL NG +
Sbjct: 695 LGNQIMPGFLNMKIKFVCAQCLRNGQV 721


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 52,883,294
Number of Sequences: 219361
Number of extensions: 976290
Number of successful extensions: 2346
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2319
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2346
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 1396778976
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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