| Clone Name | baal9i23 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AC155822.2| Mus musculus BAC clone RP23-319J10 from chromosome 16, complete sequence Length = 192526 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 79 gagtaggaatatttgaacagt 99 ||||||||||||||||||||| Sbjct: 66702 gagtaggaatatttgaacagt 66722
>gb|AC163223.15| Mus musculus chromosome 8, clone RP24-334B10, complete sequence Length = 157069 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 195 aggacccacaagcagcagcaagaga 219 |||| |||||||||||||||||||| Sbjct: 52696 aggatccacaagcagcagcaagaga 52720
>gb|AC130673.10| Mus musculus chromosome 15, clone RP24-97F15, complete sequence Length = 136395 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 532 atgtacatgttctagccagg 551 |||||||||||||||||||| Sbjct: 27574 atgtacatgttctagccagg 27593
>gb|AC146138.2| Pan troglodytes BAC clone RP43-3D14 from 7, complete sequence Length = 176823 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 195 aggacccacaagcagcagca 214 |||||||||||||||||||| Sbjct: 121376 aggacccacaagcagcagca 121357
>gb|AC137681.20| Mus musculus chromosome 14, clone RP23-460H20, complete sequence Length = 212261 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 196 ggacccacaagcagcagcaagaga 219 ||||||||||||||||| |||||| Sbjct: 193550 ggacccacaagcagcagaaagaga 193573
>emb|AL358532.11| Human DNA sequence from clone RP11-186O14 on chromosome 10 Contains the LIPF gene for gastric lipase, the genes for two novel ab-hydrolase associated lipase region domain containing proteins and a CHC1L (chromosome condensation 1-like RCC1-like G exchanging factor RLG) pseudogene, complete sequence Length = 161826 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 46 caacagtggttcctgaagga 65 |||||||||||||||||||| Sbjct: 161119 caacagtggttcctgaagga 161138
>emb|AL353113.7| Human DNA sequence from clone RP11-304I5 on chromosome 10 Contains the gene for a novel lipase and gene MGC22805, complete sequence Length = 43456 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 46 caacagtggttcctgaagga 65 |||||||||||||||||||| Sbjct: 1293 caacagtggttcctgaagga 1312
>emb|AL136441.16| Human DNA sequence from clone RP11-19D22 on chromosome 13q22.1-22.3 Contains a CpG island, complete sequence Length = 180992 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 478 tcttggtcttttgcctttta 497 |||||||||||||||||||| Sbjct: 174782 tcttggtcttttgcctttta 174763
>emb|AL928552.7| Mouse DNA sequence from clone RP23-30I12 on chromosome 4, complete sequence Length = 206507 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 350 tgaaccagccagctccaacctgac 373 ||||||||||| |||||||||||| Sbjct: 57979 tgaaccagccatctccaacctgac 58002
>gb|AC112651.4| Homo sapiens X BAC RP13-302M16 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 159274 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 413 atactacactgacacatggtctga 436 ||||| |||||||||||||||||| Sbjct: 107008 atacttcactgacacatggtctga 106985
>gb|AF334674.1|AF334674 Oncorhynchus mykiss Wilms' tumor suppressor 2b (WT-t2b) mRNA, complete cds Length = 2289 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 152 tgacaaggtttgctacagcaagaa 175 ||||| |||||||||||||||||| Sbjct: 2243 tgacacggtttgctacagcaagaa 2266
>gb|AC048362.14| Mus musculus, clone RP23-105E2, complete sequence Length = 209211 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 348 actgaaccagccagctccaa 367 |||||||||||||||||||| Sbjct: 95922 actgaaccagccagctccaa 95903
>dbj|AK045169.1| Mus musculus 9.5 days embryo parthenogenote cDNA, RIKEN full-length enriched library, clone:B130042J16 product:unclassifiable, full insert sequence Length = 3013 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 58 ctgaaggaaggtgccaaggc 77 |||||||||||||||||||| Sbjct: 2801 ctgaaggaaggtgccaaggc 2820
>gb|AC154471.2| Mus musculus BAC clone RP23-195D3 from chromosome 14, complete sequence Length = 192057 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 196 ggacccacaagcagcagcaagaga 219 ||||||||||||||||| |||||| Sbjct: 178682 ggacccacaagcagcagaaagaga 178659
>emb|CT025521.10| Mouse DNA sequence from clone RP23-337J16 on chromosome 16, complete sequence Length = 200017 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 58 ctgaaggaaggtgccaaggc 77 |||||||||||||||||||| Sbjct: 1157 ctgaaggaaggtgccaaggc 1138 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,037,579 Number of Sequences: 3902068 Number of extensions: 5037579 Number of successful extensions: 86958 Number of sequences better than 10.0: 15 Number of HSP's better than 10.0 without gapping: 15 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 86933 Number of HSP's gapped (non-prelim): 25 length of query: 580 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 557 effective length of database: 17,143,297,704 effective search space: 9548816821128 effective search space used: 9548816821128 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)