ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal9i18 |
|---|---|
| Clone Library Name | barley_pub |
>ARFJ_ARATH (Q9SKN5) Auxin response factor 10| Length = 693 Score = 161 bits (408), Expect = 7e-40 Identities = 98/156 (62%), Positives = 104/156 (66%), Gaps = 15/156 (9%) Frame = +2 Query: 8 TEDSSRISWFMGTVSVVQVADPIRWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNM 187 TEDSSRISWFMGTVS VQVADPIRWPNSPWRLLQV WDEPDLLQNVKRVSPWLVELVSNM Sbjct: 327 TEDSSRISWFMGTVSAVQVADPIRWPNSPWRLLQVAWDEPDLLQNVKRVSPWLVELVSNM 386 Query: 188 PAIHLAPFSPPRKKLCVPFYPDLPVDG-QFP--SPMFHXXXXXXXXXXXXXXXXXXXTPA 358 P IHL+PFS PRKK+ +P + P G +FP SP F PA Sbjct: 387 PTIHLSPFS-PRKKIRIPQPFEFPFHGTKFPIFSPGF--ANNGGGESMCYLSNDNNNAPA 443 Query: 359 GIQGARHAQ--FGIS----LSDLHL------NKLQS 430 GIQGAR AQ FG LSDL+L NKL S Sbjct: 444 GIQGARQAQQLFGSPSPSLLSDLNLSSYTGNNKLHS 479
>ARFP_ARATH (Q93YR9) Auxin response factor 16| Length = 670 Score = 155 bits (393), Expect = 4e-38 Identities = 82/139 (58%), Positives = 92/139 (66%), Gaps = 4/139 (2%) Frame = +2 Query: 8 TEDSSRISWFMGTVSVVQVADPIRWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNM 187 TEDSSRISWFMGTVS V V+DPIRWPNSPWRLLQV WDEPDLLQNVKRV+PWLVELVSN+ Sbjct: 329 TEDSSRISWFMGTVSAVNVSDPIRWPNSPWRLLQVAWDEPDLLQNVKRVNPWLVELVSNV 388 Query: 188 PAIHLAPFSPPRKKLCVPFYPDL-PVDGQFPSPMFHXXXXXXXXXXXXXXXXXXXTPAGI 364 I L FSPPRKK+ +P +PD + P P F P G+ Sbjct: 389 HPIPLTSFSPPRKKMRLPQHPDYNNLINSIPVPSF---PSNPLIRSSPLSSVLDNVPVGL 445 Query: 365 QGAR---HAQFGISLSDLH 412 QGAR H +G+S SDLH Sbjct: 446 QGARHNAHQYYGLSSSDLH 464
>ARFQ_ARATH (Q84WU6) Auxin response factor 17| Length = 585 Score = 90.1 bits (222), Expect = 3e-18 Identities = 54/131 (41%), Positives = 70/131 (53%), Gaps = 3/131 (2%) Frame = +2 Query: 8 TEDSSRISWFMGTVS-VVQVADPIRWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSN 184 TEDSSRI+WF G VS Q P W SPW+ LQ+TWDEP++LQNVKRV+PW VE+ ++ Sbjct: 324 TEDSSRITWFQGIVSSTYQETGP--WRGSPWKQLQITWDEPEILQNVKRVNPWQVEIAAH 381 Query: 185 MPAIHLAPFSPPRKKLCVPFYPDLPVDGQFPSPMFHXXXXXXXXXXXXXXXXXXXT--PA 358 +H PF PP K+L P + G ++ + PA Sbjct: 382 ATQLH-TPF-PPAKRLKYPQPGGGFLSGDDGEILYPQSGLSSAAAPDPSPSMFSYSTFPA 439 Query: 359 GIQGARHAQFG 391 G+QGAR FG Sbjct: 440 GMQGARQYDFG 450
>ARFB_ARATH (Q94JM3) Auxin response factor 2 (ARF1-binding protein) (ARF1-BP)| Length = 859 Score = 61.6 bits (148), Expect = 1e-09 Identities = 27/64 (42%), Positives = 36/64 (56%) Frame = +2 Query: 35 FMGTVSVVQVADPIRWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPAIHLAPFS 214 F GT+ ++ +DP RWP S WR L+V WDE + RVSPW VE PA+ P Sbjct: 348 FTGTIVGIEESDPTRWPKSKWRSLKVRWDETSSIPRPDRVSPWKVEPALAPPALSPVPMP 407 Query: 215 PPRK 226 P++ Sbjct: 408 RPKR 411
>ARFE_ARATH (P93024) Auxin response factor 5 (Transcription factor MONOPTEROS)| (Auxin-responsive protein IAA24) Length = 902 Score = 60.1 bits (144), Expect = 3e-09 Identities = 28/55 (50%), Positives = 34/55 (61%) Frame = +2 Query: 8 TEDSSRISWFMGTVSVVQVADPIRWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVE 172 TEDS + +MGT+ + DP+RWP S WR LQV WDEP RVSPW +E Sbjct: 335 TEDSGKRR-YMGTIVGISDLDPLRWPGSKWRNLQVEWDEPGCNDKPTRVSPWDIE 388
>ARFD_ARATH (Q9ZTX9) Auxin response factor 4| Length = 788 Score = 56.6 bits (135), Expect = 3e-08 Identities = 29/63 (46%), Positives = 38/63 (60%) Frame = +2 Query: 41 GTVSVVQVADPIRWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPAIHLAPFSPP 220 G V+ V DP RWPNS WR L V WDE + + +RVSPW ++ ++P HL+ S P Sbjct: 362 GVVTGVCDLDPYRWPNSKWRCLLVRWDESFVSDHQERVSPWEIDPSVSLP--HLSIQSSP 419 Query: 221 RKK 229 R K Sbjct: 420 RPK 422
>ARFF_ARATH (Q9ZTX8) Auxin response factor 6| Length = 933 Score = 55.1 bits (131), Expect = 1e-07 Identities = 32/84 (38%), Positives = 49/84 (58%) Frame = +2 Query: 8 TEDSSRISWFMGTVSVVQVADPIRWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNM 187 TE+SS + +MGT++ + DP RW NS WR ++V WDE + RVS W +E ++ Sbjct: 304 TEESS-VRRYMGTITGICDLDPTRWANSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTF 362 Query: 188 PAIHLAPFSPPRKKLCVPFYPDLP 259 P ++ +PF K+ P+ P LP Sbjct: 363 P-MYPSPFPLRLKR---PWPPGLP 382
>ARFG_ARATH (P93022) Auxin response factor 7 (Non-phototropic hypocotyl 4)| (Protein BIPOSTO) (Auxin-responsive protein IAA21/IAA23/IAA25) Length = 1164 Score = 54.7 bits (130), Expect = 1e-07 Identities = 28/63 (44%), Positives = 34/63 (53%) Frame = +2 Query: 35 FMGTVSVVQVADPIRWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPAIHLAPFS 214 +MGTV+ + DP+RW NS WR LQ+ WDE RVS W +E V I PF Sbjct: 311 YMGTVTGISDLDPVRWKNSQWRNLQIGWDESAAGDRPSRVSVWDIEPVLTPFYICPPPFF 370 Query: 215 PPR 223 PR Sbjct: 371 RPR 373
>ARFS_ARATH (Q8RYC8) Auxin response factor 19 (Auxin-responsive protein IAA22)| Length = 1086 Score = 54.7 bits (130), Expect = 1e-07 Identities = 34/86 (39%), Positives = 42/86 (48%) Frame = +2 Query: 8 TEDSSRISWFMGTVSVVQVADPIRWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNM 187 TED + +MGTV+ + DP+RW S WR LQV WDE RVS W +E V Sbjct: 302 TEDCG-VRRYMGTVTGISDLDPVRWKGSQWRNLQVGWDESTAGDRPSRVSIWEIEPVITP 360 Query: 188 PAIHLAPFSPPRKKLCVPFYPDLPVD 265 I PF P+ P P +P D Sbjct: 361 FYICPPPFFRPK----YPRQPGMPDD 382
>ARFH_ARATH (Q9FGV1) Auxin response factor 8| Length = 811 Score = 54.3 bits (129), Expect = 2e-07 Identities = 25/61 (40%), Positives = 38/61 (62%) Frame = +2 Query: 8 TEDSSRISWFMGTVSVVQVADPIRWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNM 187 TE+SS + +MGT++ + D +RWPNS WR ++V WDE + RVS W +E ++ Sbjct: 303 TEESS-VRRYMGTITGISDLDSVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTF 361 Query: 188 P 190 P Sbjct: 362 P 362
>ARFR_ARATH (Q9C5W9) Auxin response factor 18| Length = 602 Score = 49.3 bits (116), Expect = 5e-06 Identities = 22/51 (43%), Positives = 30/51 (58%) Frame = +2 Query: 77 RWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPAIHLAPFSPPRKK 229 +WP S WR LQV WDEP +Q +VSPW +E P + +P S P ++ Sbjct: 323 QWPASKWRSLQVQWDEPTTVQRPDKVSPWEIE-----PFLATSPISTPAQQ 368
>ARFA_ARATH (Q8L7G0) Auxin response factor 1| Length = 665 Score = 48.9 bits (115), Expect = 7e-06 Identities = 31/82 (37%), Positives = 38/82 (46%) Frame = +2 Query: 35 FMGTVSVVQVADPIRWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPAIHLAPFS 214 F GT+ VQ W +S WR L+V WDEP + +RVSPW +E + P Sbjct: 308 FSGTIVGVQENKSSVWHDSEWRSLKVQWDEPSSVFRPERVSPWELEPLVANSTPSSQPQP 367 Query: 215 PPRKKLCVPFYPDLPVDGQFPS 280 P R K P P LP PS Sbjct: 368 PQRNKR--PRPPGLPSPATGPS 387
>ARFC_ARATH (O23661) Auxin response factor 3 (Protein ETTIN)| Length = 608 Score = 48.5 bits (114), Expect = 9e-06 Identities = 21/44 (47%), Positives = 27/44 (61%) Frame = +2 Query: 41 GTVSVVQVADPIRWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVE 172 G +S + DPIRWP S WR L V WD+ + +RVSPW +E Sbjct: 345 GIISGISDLDPIRWPGSKWRCLLVRWDDIVANGHQQRVSPWEIE 388
>ARFK_ARATH (Q9ZPY6) Auxin response factor 11| Length = 601 Score = 47.8 bits (112), Expect = 2e-05 Identities = 21/47 (44%), Positives = 26/47 (55%) Frame = +2 Query: 77 RWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPAIHLAPFSP 217 +WP S WR LQ+ WDEP +Q +VSPW +E PFSP Sbjct: 319 QWPASKWRSLQIQWDEPSSIQRPNKVSPWEIE-----------PFSP 354
>ARFI_ARATH (Q9XED8) Auxin response factor 9| Length = 638 Score = 44.7 bits (104), Expect = 1e-04 Identities = 20/46 (43%), Positives = 27/46 (58%) Frame = +2 Query: 35 FMGTVSVVQVADPIRWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVE 172 + GTV V+ P W +S WR L+V WDEP + +VSPW +E Sbjct: 298 YSGTVIGVKDCSP-HWKDSKWRCLEVHWDEPASISRPNKVSPWEIE 342
>ARFL_ARATH (Q9XID4) Putative auxin response factor 12| Length = 593 Score = 40.0 bits (92), Expect = 0.003 Identities = 23/54 (42%), Positives = 30/54 (55%) Frame = +2 Query: 41 GTVSVVQVADPIRWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPAIHL 202 GT+ V P W S WR L+V WDE K+VSPW +E + MPAI++ Sbjct: 310 GTIIGVSDFSP-HWKCSEWRSLEVQWDEFTSFPGPKKVSPWDIEHL--MPAINV 360
>ARFV_ARATH (Q9C8N7) Putative auxin response factor 22| Length = 598 Score = 38.5 bits (88), Expect = 0.009 Identities = 21/56 (37%), Positives = 30/56 (53%) Frame = +2 Query: 35 FMGTVSVVQVADPIRWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPAIHL 202 + GT+ V P W S WR L+V WDE +VSPW +E + MPA+++ Sbjct: 306 YFGTIIGVSDFSP-HWKCSEWRNLEVQWDEFASFSRPNKVSPWEIEHL--MPALNV 358
>ARFU_ARATH (Q9C8N9) Putative auxin response factor 21| Length = 606 Score = 38.1 bits (87), Expect = 0.012 Identities = 24/67 (35%), Positives = 30/67 (44%), Gaps = 1/67 (1%) Frame = +2 Query: 35 FMGTVSVVQVADPIRWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPAIHLAP-F 211 + GT+ V P W S WR L+V WDE +VSPW +E HL P Sbjct: 308 YFGTIIGVSDFSP-HWKCSEWRSLEVQWDEFASFSRPNKVSPWEIE--------HLVPAL 358 Query: 212 SPPRKKL 232 + PR L Sbjct: 359 NVPRSSL 365
>ARFO_ARATH (Q9LQE3) Putative auxin response factor 15| Length = 593 Score = 38.1 bits (87), Expect = 0.012 Identities = 21/56 (37%), Positives = 30/56 (53%) Frame = +2 Query: 35 FMGTVSVVQVADPIRWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPAIHL 202 + GT+ V P W S WR L+V WDE +VSPW +E + MPA+++ Sbjct: 308 YFGTIIGVSNFSP-HWKCSDWRSLEVQWDEFASFLRPNKVSPWEIEHL--MPALNV 360
>ARFM_ARATH (Q9FX25) Putative auxin response factor 13| Length = 623 Score = 37.7 bits (86), Expect = 0.016 Identities = 22/63 (34%), Positives = 33/63 (52%) Frame = +2 Query: 41 GTVSVVQVADPIRWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPAIHLAPFSPP 220 GT+ V P W +S WR L+V WDE +VSPW +E + +P+ ++ S Sbjct: 312 GTIIGVNDMSP-HWKDSEWRSLKVQWDELSPFLRPNQVSPWDIEHL--IPSSDISQSSLK 368 Query: 221 RKK 229 +KK Sbjct: 369 KKK 371
>ARFT_ARATH (Q9C7I9) Putative auxin response factor 20| Length = 606 Score = 37.0 bits (84), Expect = 0.027 Identities = 18/46 (39%), Positives = 23/46 (50%) Frame = +2 Query: 35 FMGTVSVVQVADPIRWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVE 172 + GT+ V P W S WR L+V WDE +VSPW +E Sbjct: 308 YFGTIIGVNDFSP-HWKCSEWRSLEVQWDEFASFSRPNKVSPWEIE 352
>ARFN_ARATH (Q9LQE8) Putative auxin response factor 14| Length = 605 Score = 36.6 bits (83), Expect = 0.036 Identities = 22/58 (37%), Positives = 27/58 (46%) Frame = +2 Query: 41 GTVSVVQVADPIRWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPAIHLAPFS 214 GT+ V P W S WR L+V WDE +VSPW +E HL P+S Sbjct: 310 GTIIGVSDFSP-HWKCSEWRSLEVQWDEFASFPRPNQVSPWDIE--------HLTPWS 358
>SEM1A_DROME (Q24322) Semaphorin-1A precursor (Semaphorin-I) (Sema I)| Length = 850 Score = 34.7 bits (78), Expect = 0.14 Identities = 26/89 (29%), Positives = 37/89 (41%), Gaps = 4/89 (4%) Frame = -1 Query: 347 RQGNSTSDXXXXXXXXXXXGTSGTETGRRPEGPGR----TEHRASSEEARTEQGEWPACL 180 R+G+ S T GR P R T+HR++S + + +Q + P Sbjct: 755 RRGDGFSTTRSVKKAVNNTNTRNRSLGRARRQPPRHGIVTQHRSNSPQQQQQQSQQPHSS 814 Query: 179 RPAQPAMGSPSSHSAAGPVHPKSPEEVSK 93 + P M S SS S A P SP+E K Sbjct: 815 SGSSPVM-SNSSSSPAPPSSSPSPQESPK 842
>M940_ARATH (P92530) Hypothetical mitochondrial protein AtMg00940 (ORF164)| Length = 164 Score = 32.3 bits (72), Expect = 0.67 Identities = 17/31 (54%), Positives = 18/31 (58%), Gaps = 1/31 (3%) Frame = +2 Query: 8 TEDSSRISWFMGTV-SVVQVADPIRWPNSPW 97 TEDSSRI+WF G V Q P W SPW Sbjct: 120 TEDSSRITWFQGIVFYTYQETGP--WRGSPW 148
>CEBPD_HUMAN (P49716) CCAAT/enhancer-binding protein delta (C/EBP delta)| (Nuclear factor NF-IL6-beta) (NF-IL6-beta) Length = 269 Score = 32.0 bits (71), Expect = 0.88 Identities = 23/56 (41%), Positives = 26/56 (46%), Gaps = 3/56 (5%) Frame = -1 Query: 263 RPEGPGRTEHRASSEEARTEQGEWPACLRPAQ--PAMGSPSSHSAAG-PVHPKSPE 105 RP GPG R E G+ P L PAQ P + S +AAG P P SPE Sbjct: 107 RPLGPGPAAPRLLKREPDWGDGDAPGSLLPAQVGPCAQTVVSLAAAGQPTPPTSPE 162
>2ACA_HUMAN (Q06190) Serine/threonine-protein phosphatase 2A 72/130 kDa| regulatory subunit B (PP2A, subunit B, B''-PR72/PR130) (PP2A, subunit B, B72/B130 isoforms) (PP2A, subunit B, PR72/PR130 isoforms) (PP2A, subunit B, R3 isoform) Length = 1150 Score = 31.6 bits (70), Expect = 1.2 Identities = 15/31 (48%), Positives = 19/31 (61%) Frame = +2 Query: 164 LVELVSNMPAIHLAPFSPPRKKLCVPFYPDL 256 L EL+SNMP++ L PFSP P Y D+ Sbjct: 307 LTELISNMPSLQLTPFSPVFGTEQPPKYEDV 337
>RS19_METKA (Q8TWP2) 30S ribosomal protein S19P| Length = 149 Score = 31.6 bits (70), Expect = 1.2 Identities = 16/38 (42%), Positives = 20/38 (52%) Frame = -2 Query: 304 EWVSVEHRGRKLAVDRKVRVERNTELLPRRRERSKVNG 191 EWV +RG L K+ +E ELLP R+ RS G Sbjct: 17 EWVEFRYRGYTLGELMKMPIEEFIELLPARQRRSLKRG 54
>MMP9_RABIT (P41246) Matrix metalloproteinase-9 precursor (EC 3.4.24.35)| (MMP-9) (92 kDa type IV collagenase) (92 kDa gelatinase) (Gelatinase B) (GELB) Length = 707 Score = 31.2 bits (69), Expect = 1.5 Identities = 15/48 (31%), Positives = 21/48 (43%) Frame = -1 Query: 260 PEGPGRTEHRASSEEARTEQGEWPACLRPAQPAMGSPSSHSAAGPVHP 117 P+ P T T WPA +RP++ SP+ +AGP P Sbjct: 449 PQPPATTTPEPQPTAPPTACPTWPATVRPSEHPTTSPTGAPSAGPTGP 496
>HELY_MYCTU (Q10701) Probable helicase helY (EC 3.6.1.-)| Length = 906 Score = 30.4 bits (67), Expect = 2.6 Identities = 33/124 (26%), Positives = 47/124 (37%), Gaps = 6/124 (4%) Frame = -1 Query: 473 ARRDRPGEARAVTDSTAVC*GGDLIKIYQIEHAWLPVCLQECRQGNSTSDXXXXXXXXXX 294 AR R +A TD+ A GD+I I L V L+ R + Sbjct: 533 ARASRLQRRQAATDALAALRRGDIITITHGRRGGLAVVLESARDRDDPRPLVLTEHRWAG 592 Query: 293 XGTSGTETGRRPEG----PGRTEHRASSEEARTEQGEWPACLRPAQPAMGSPSSH--SAA 132 +S +G P G P R EHR + R + + + LR A + P++ S A Sbjct: 593 RISSADYSGTTPVGSMTLPKRVEHR----QPRVRR-DLASALRSAAAGLVIPAARRVSEA 647 Query: 131 GPVH 120 G H Sbjct: 648 GGFH 651
>MUCDL_HUMAN (Q9HBB8) Mucin and cadherin-like protein precursor| (Mu-protocadherin) Length = 845 Score = 30.4 bits (67), Expect = 2.6 Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 1/46 (2%) Frame = -1 Query: 260 PEGPGR-TEHRASSEEARTEQGEWPACLRPAQPAMGSPSSHSAAGP 126 P G G T H+ ++ T Q P +P P+MG+ +SH A P Sbjct: 552 PPGVGTSTSHQPATPSGGTVQTPEPGTSQPMPPSMGTSTSHQPATP 597 Score = 29.6 bits (65), Expect = 4.4 Identities = 17/54 (31%), Positives = 24/54 (44%) Frame = -1 Query: 287 TSGTETGRRPEGPGRTEHRASSEEARTEQGEWPACLRPAQPAMGSPSSHSAAGP 126 TS T G P T H+ ++ T Q P +P P +G+ +SH A P Sbjct: 514 TSSTPGGS-PGAENSTSHQPATPGGDTAQTPKPGTSQPMPPGVGTSTSHQPATP 566
>FTSZ_AGRTU (O30992) Cell division protein ftsZ| Length = 583 Score = 30.0 bits (66), Expect = 3.3 Identities = 17/48 (35%), Positives = 26/48 (54%) Frame = -1 Query: 239 EHRASSEEARTEQGEWPACLRPAQPAMGSPSSHSAAGPVHPKSPEEVS 96 + R S+ + E PA LRPAQP + + A PV+ +PE+V+ Sbjct: 397 DFRPQSKLFASSPAEAPAALRPAQPVQQAAPAPVAQAPVY-HAPEQVA 443
>TARA_MOUSE (Q99KW3) TRIO and F-actin-binding protein (Protein Tara)| (Trio-associated repeat on actin) Length = 2014 Score = 30.0 bits (66), Expect = 3.3 Identities = 19/66 (28%), Positives = 26/66 (39%), Gaps = 11/66 (16%) Frame = -1 Query: 266 RRPEGPGRTEHRASSEEARTEQGEWPACLRPAQPA-----------MGSPSSHSAAGPVH 120 R+ E PG + R R Q + R + PA P+ S GP H Sbjct: 980 RKSEAPGAFQTRDEGRSQRPSQAQ-SQLRRQSSPAPSRQVTKPSAKQAEPTRQSRTGPPH 1038 Query: 119 PKSPEE 102 PKSP++ Sbjct: 1039 PKSPDK 1044
>CY1_PARDE (P13627) Cytochrome c1 precursor| Length = 450 Score = 30.0 bits (66), Expect = 3.3 Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 5/66 (7%) Frame = -1 Query: 284 SGTETGRRPEGPGRTEHRASSEEARTEQ--GEWPACLRPA-QPAMGSPSSHSAA--GPVH 120 + TE P E +A++EEA E+ E PA PA +PA +P+ +AA P Sbjct: 95 AATEEPDAEAEPAAEEAQATTEEAPAEEPAAEEPAAEEPAEEPAADAPAEEAAAEEAPAE 154 Query: 119 PKSPEE 102 P++ E Sbjct: 155 PEAAAE 160
>PLCB3_HUMAN (Q01970) 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase| beta 3 (EC 3.1.4.11) (Phosphoinositide phospholipase C) (Phospholipase C-beta-3) (PLC-beta-3) Length = 1234 Score = 30.0 bits (66), Expect = 3.3 Identities = 14/42 (33%), Positives = 20/42 (47%) Frame = -1 Query: 254 GPGRTEHRASSEEARTEQGEWPACLRPAQPAMGSPSSHSAAG 129 GP + E++ + E A P+ P +GSPSS S G Sbjct: 477 GPDSAGRKRPLEQSNSALSESSAATEPSSPQLGSPSSDSCPG 518
>KKA8_ECOLI (P14509) Aminoglycoside 3'-phosphotransferase (EC 2.7.1.95)| (Kanamycin kinase, type VIII) (Neomycin-kanamycin phosphotransferase type VIII) (APH(3')VIII) Length = 271 Score = 30.0 bits (66), Expect = 3.3 Identities = 12/32 (37%), Positives = 17/32 (53%) Frame = +2 Query: 8 TEDSSRISWFMGTVSVVQVADPIRWPNSPWRL 103 T++ R+ W G +SV V +R PN W L Sbjct: 66 TDEMVRLRWLAGHISVPSVVSFVRTPNQAWLL 97
>ITSN1_XENLA (O42287) Intersectin-1| Length = 1270 Score = 29.6 bits (65), Expect = 4.4 Identities = 17/58 (29%), Positives = 26/58 (44%), Gaps = 2/58 (3%) Frame = -1 Query: 248 GRTEHRASSEEARTEQGEWPACLRPAQPAMGSPSSHSAAGPVHPKSPEEVS--KVNWA 81 G+T ++ R + E+P+ +PA P+ H A PV P + S NWA Sbjct: 778 GKTGWFPANYAERMPESEFPSTTKPAAETTAKPTVHVAPSPVAPAAFTNTSTNSNNWA 835
>IF2_BORPE (Q7VYR2) Translation initiation factor IF-2| Length = 997 Score = 29.6 bits (65), Expect = 4.4 Identities = 18/54 (33%), Positives = 23/54 (42%) Frame = -1 Query: 266 RRPEGPGRTEHRASSEEARTEQGEWPACLRPAQPAMGSPSSHSAAGPVHPKSPE 105 R P + A +EEA E A PA+P P+ +AA PV P E Sbjct: 97 RDPAELAAEQAAARAEEAAAEAVPAEAAPAPAEPVRAEPAVETAAKPVEPPVAE 150
>IF2_BORBR (Q7WHG2) Translation initiation factor IF-2| Length = 997 Score = 29.6 bits (65), Expect = 4.4 Identities = 18/54 (33%), Positives = 23/54 (42%) Frame = -1 Query: 266 RRPEGPGRTEHRASSEEARTEQGEWPACLRPAQPAMGSPSSHSAAGPVHPKSPE 105 R P + A +EEA E A PA+P P+ +AA PV P E Sbjct: 97 RDPAELAAEQAAARAEEAAAEAVPAEAAPAPAEPVRAEPAVETAAKPVEPPVAE 150
>POLR_TYMVA (P20128) RNA replicase polyprotein (EC 2.7.7.48)| Length = 1844 Score = 29.6 bits (65), Expect = 4.4 Identities = 16/43 (37%), Positives = 19/43 (44%) Frame = -2 Query: 157 AHPLHILQQVRFIPSHLKKSPR*IGPSNGVGHLHDRHSPHEPA 29 A P H LQ + +P+ L P IGP LH R P A Sbjct: 720 APPTHPLQSSQLLPAPLTNDPTAIGPVLPFEELHPRRYPENTA 762
>IL4RA_MOUSE (P16382) Interleukin-4 receptor alpha chain precursor (IL-4R-alpha)| (CD124 antigen) [Contains: Soluble interleukin-4 receptor alpha chain (IL-4-binding protein) (IL4-BP)] Length = 810 Score = 29.6 bits (65), Expect = 4.4 Identities = 21/61 (34%), Positives = 27/61 (44%) Frame = +1 Query: 94 LETSSGDLG*TGPAAECEEGEPMAG*AGLKHAGHSPCSVLASSEEALCSVLPGPSGRRPV 273 LE +G LG + A C +G A + A C + SEEA C V PS P+ Sbjct: 419 LEAENGGLGQSALAESCSPLPSGSGQASVSWA----CLPMGPSEEATCQVTEQPSHPGPL 474 Query: 274 S 276 S Sbjct: 475 S 475
>ROBO3_HUMAN (Q96MS0) Roundabout homolog 3 precursor (Roundabout-like protein 3)| Length = 1386 Score = 29.3 bits (64), Expect = 5.7 Identities = 26/96 (27%), Positives = 38/96 (39%), Gaps = 1/96 (1%) Frame = -1 Query: 479 SVARRDRPGEARAVTDSTAVC*GGDLIKIYQIEHAWLPVCLQE-CRQGNSTSDXXXXXXX 303 S R+R GE +AV AV + ++ E AWLP +G TS Sbjct: 1292 SSLERERSGERKAVQ---AVPLAAQRV-LHPDEEAWLPYSRPSFLSRGQGTS----TCST 1343 Query: 302 XXXXGTSGTETGRRPEGPGRTEHRASSEEARTEQGE 195 + G+ + R GPGR+ R+ S G+ Sbjct: 1344 AGSNSSRGSSSSRGSRGPGRSRSRSQSRSQSQRPGQ 1379
>PCL_DROME (Q24459) Polycomb protein Pcl (Polycomblike protein)| Length = 1043 Score = 29.3 bits (64), Expect = 5.7 Identities = 20/58 (34%), Positives = 27/58 (46%), Gaps = 3/58 (5%) Frame = -1 Query: 248 GRTEHRASSEEARTEQGEWPACLRPAQP-AMGSPSSHSAAGP--VHPKSPEEVSKVNW 84 GR HR + E T G W +C R A+P M P SH P + + P K++W Sbjct: 446 GRGYHRGCTVEIVTGSGIW-SCKRCAKPMKMQQPVSHKITKPAGICRQLPYHADKLSW 502
>FOXE1_HUMAN (O00358) Forkhead box protein E1 (Thyroid transcription factor 2)| (TTF-2) (Forkhead-related protein FKHL15) Length = 376 Score = 29.3 bits (64), Expect = 5.7 Identities = 19/50 (38%), Positives = 24/50 (48%) Frame = -1 Query: 275 ETGRRPEGPGRTEHRASSEEARTEQGEWPACLRPAQPAMGSPSSHSAAGP 126 E G P GPG + AS+ T G PA A+PA S + + AGP Sbjct: 238 ELGPAPSGPGGSCAFASAGAPATTTGYQPAGCTGARPANPSAYAAAYAGP 287
>RS19_AERPE (Q9YF74) 30S ribosomal protein S19P| Length = 145 Score = 29.3 bits (64), Expect = 5.7 Identities = 14/38 (36%), Positives = 19/38 (50%) Frame = -2 Query: 304 EWVSVEHRGRKLAVDRKVRVERNTELLPRRRERSKVNG 191 EW +RGR L K+ +E L P R+ RS + G Sbjct: 9 EWKKFRYRGRTLEELLKMDIEELARLFPARQRRSLLRG 46
>PCGF2_HUMAN (P35227) Polycomb group RING finger protein 2 (DNA-binding protein| Mel-18) (RING finger protein 110) (Zinc finger protein 144) Length = 344 Score = 29.3 bits (64), Expect = 5.7 Identities = 22/64 (34%), Positives = 28/64 (43%), Gaps = 8/64 (12%) Frame = -1 Query: 248 GRTEHRASSEEARTEQGEWPACL--------RPAQPAMGSPSSHSAAGPVHPKSPEEVSK 93 G AS E+ +++ PA L PA P+ GSPSSH HP SP S Sbjct: 247 GTNTSGASECESVSDKAPSPATLPATSSSLPSPATPSHGSPSSHGPPA-THPTSPTPPST 305 Query: 92 VNWA 81 + A Sbjct: 306 ASGA 309
>TIM54_NEUCR (Q9C0Q7) Mitochondrial import inner membrane translocase subunit| tim-54 Length = 425 Score = 28.9 bits (63), Expect = 7.5 Identities = 16/54 (29%), Positives = 30/54 (55%) Frame = -1 Query: 257 EGPGRTEHRASSEEARTEQGEWPACLRPAQPAMGSPSSHSAAGPVHPKSPEEVS 96 EG TE + + E+ ++ E P RP QP + +S ++ +HP +P+E++ Sbjct: 206 EGSTSTEDKPAEEK---KEEEAPKPKRPPQPKPYNTTSDYSSETLHPLTPQELT 256
>CY550_PARDE (P00096) Cytochrome c-550 precursor (Cytochrome c550) (Cytochrome| C2) Length = 155 Score = 28.5 bits (62), Expect = 9.7 Identities = 11/28 (39%), Positives = 17/28 (60%) Frame = +2 Query: 110 VTWDEPDLLQNVKRVSPWLVELVSNMPA 193 +TW E DL++ V PWLV++ + A Sbjct: 89 LTWTEADLIEYVTDPKPWLVKMTDDKGA 116
>PCGF2_MOUSE (P23798) Polycomb group RING finger protein 2 (DNA-binding protein| Mel-18) (RING finger protein 110) (Zinc finger protein 144) (Zfp-144) Length = 342 Score = 28.5 bits (62), Expect = 9.7 Identities = 20/55 (36%), Positives = 25/55 (45%), Gaps = 8/55 (14%) Frame = -1 Query: 248 GRTEHRASSEEARTEQGEWPACL--------RPAQPAMGSPSSHSAAGPVHPKSP 108 G AS E+ +++ PA L PA P+ GSPSSH HP SP Sbjct: 247 GTNTSGASECESVSDKAPSPATLPATSSSLPSPATPSHGSPSSHGPPA-THPTSP 300
>Y1471_METMP (Q6LX81) Hypothetical UPF0348 protein MMP1471| Length = 349 Score = 28.5 bits (62), Expect = 9.7 Identities = 13/33 (39%), Positives = 15/33 (45%) Frame = +1 Query: 184 HAGHSPCSVLASSEEALCSVLPGPSGRRPVSVP 282 H GH C SE SV+PGP R +P Sbjct: 56 HNGHKYCMDFGKSEGLFISVIPGPLERSGRGIP 88
>BSN_HUMAN (Q9UPA5) Bassoon protein (Zinc-finger protein 231)| Length = 3925 Score = 28.5 bits (62), Expect = 9.7 Identities = 15/58 (25%), Positives = 24/58 (41%) Frame = -1 Query: 269 GRRPEGPGRTEHRASSEEARTEQGEWPACLRPAQPAMGSPSSHSAAGPVHPKSPEEVS 96 G +P T+ R + T +G PA +PA PS+ + P P E+ + Sbjct: 3785 GLQPPQQALTQARLQQQSQPTTRGSAPAASQPAGKPQPGPSTATGPQPAGPPRAEQTN 3842
>RW1_HUMAN (Q92545) RW1 protein (Fragment)| Length = 1805 Score = 28.5 bits (62), Expect = 9.7 Identities = 20/66 (30%), Positives = 27/66 (40%), Gaps = 2/66 (3%) Frame = -1 Query: 287 TSGTETGRRPEGPGRTEHRASSE-EARTEQGEWPACLRPA-QPAMGSPSSHSAAGPVHPK 114 T G GR+ +G +++H + + EQ P P QP P S A HP Sbjct: 1193 TQGHTAGRKSKGAKQSQHGSQHHAHSPLEQHPQPPLPPPVPQPQEPQPERLSPAPLAHPS 1252 Query: 113 SPEEVS 96 PE S Sbjct: 1253 HPERAS 1258
>YDC9_SCHPO (Q10172) Hypothetical protein C25G10.09c in chromosome I| Length = 1794 Score = 28.5 bits (62), Expect = 9.7 Identities = 17/52 (32%), Positives = 22/52 (42%) Frame = +2 Query: 125 PDLLQNVKRVSPWLVELVSNMPAIHLAPFSPPRKKLCVPFYPDLPVDGQFPS 280 P + V V P +V+N PA AP P P P++PV PS Sbjct: 1449 PAPMHAVAPVQPKAPGMVTNAPAPSSAPAPPAPVSQLPPAVPNVPVPSMIPS 1500
>SLR1_ORYSA (Q7G7J6) DELLA protein SLR1 (Protein SLENDER RICE1) (Gibberellic| acid-insensitive mutant protein) (OsGAI) Length = 625 Score = 28.5 bits (62), Expect = 9.7 Identities = 16/56 (28%), Positives = 25/56 (44%), Gaps = 3/56 (5%) Frame = -1 Query: 236 HRASSEEARTEQG-EWPACLRPAQPAMGSPSSH--SAAGPVHPKSPEEVSKVNWAI 78 HR + +QG +WPA L+ G P S + GP P + + +V W + Sbjct: 342 HRVHVVDFGIKQGMQWPALLQALALRPGGPPSFRLTGVGPPQPDETDALQQVGWKL 397 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 71,903,982 Number of Sequences: 219361 Number of extensions: 1472319 Number of successful extensions: 4871 Number of sequences better than 10.0: 53 Number of HSP's better than 10.0 without gapping: 4623 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4864 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3304846491 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
