>gb|AC087518.5| Homo sapiens chromosome , clone RP11-359E19, complete sequence
          Length = 168531

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 169    ataattggaccttgaaataataaat 193
              |||||| ||||||||||||||||||
Sbjct: 159905 ataattcgaccttgaaataataaat 159929

>gb|AC022733.8| Homo sapiens chromosome 8, clone RP11-470M17, complete sequence
          Length = 175202

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 169   ataattggaccttgaaataataaat 193
             |||||| ||||||||||||||||||
Sbjct: 98047 ataattcgaccttgaaataataaat 98023

>emb|CR848788.7| Zebrafish DNA sequence from clone DKEY-283B15 in linkage group 16,
             complete sequence
          Length = 189441

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 268   tggcatttcattggtccttc 287
             ||||||||||||||||||||
Sbjct: 50710 tggcatttcattggtccttc 50729

>ref|XM_649788.1| Entamoeba histolytica HM-1:IMSS hypothetical protein (41.t00040)
           partial mRNA
          Length = 360

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 238 catcttcttctgtacttgaataag 261
           |||||| |||||||||||||||||
Sbjct: 85  catctttttctgtacttgaataag 62

>ref|XM_649866.1| Entamoeba histolytica HM-1:IMSS RNA-binding protein (39.t00057)
           partial mRNA
          Length = 621

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 238 catcttcttctgtacttgaataag 261
           |||||| |||||||||||||||||
Sbjct: 85  catctttttctgtacttgaataag 62

>ref|XM_649891.1| Entamoeba histolytica HM-1:IMSS hypothetical protein (39.t00055)
           partial mRNA
          Length = 621

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 238 catcttcttctgtacttgaataag 261
           |||||| |||||||||||||||||
Sbjct: 85  catctttttctgtacttgaataag 62

>ref|XM_759973.1| Theileria parva strain Muguga phosphate transporter (TP02_0500)
            partial mRNA
          Length = 2241

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 8    atgacggcatcgacgaggag 27
            ||||||||||||||||||||
Sbjct: 1568 atgacggcatcgacgaggag 1587

>emb|CR522870.1| Desulfotalea psychrophila LSv54 chromosome
          Length = 3523383

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 47     gaaagatgatcttatcttgc 66
              ||||||||||||||||||||
Sbjct: 190116 gaaagatgatcttatcttgc 190135

>gb|AC010853.11| Homo sapiens chromosome 18, clone RP11-349D12, complete sequence
          Length = 184396

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 210    ttcctcagcatattacaccgagtaatgg 237
              |||||| |||||||||||| ||||||||
Sbjct: 160416 ttcctctgcatattacacccagtaatgg 160443

>gb|AC091154.3| Homo sapiens chromosome 17, clone RP11-750B16, complete sequence
          Length = 175783

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 235    tggcatcttcttctgtactt 254
              ||||||||||||||||||||
Sbjct: 153420 tggcatcttcttctgtactt 153439

>emb|BX649242.6| Zebrafish DNA sequence from clone DKEY-264C3 in linkage group 17,
            complete sequence
          Length = 147772

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 255  gaataagttataatggcatttcattggt 282
            |||| |||||| ||||||||||||||||
Sbjct: 4659 gaatgagttattatggcatttcattggt 4686

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 233      aatggcatcttcttctgtacttga 256
                |||||||||||||||||| |||||
Sbjct: 24302134 aatggcatcttcttctgtccttga 24302111

>gb|AC015974.10| Homo sapiens BAC clone RP11-467A18 from 2, complete sequence
          Length = 196544

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 234    atggcatcttcttctgtact 253
              ||||||||||||||||||||
Sbjct: 195869 atggcatcttcttctgtact 195850

>gb|AC067961.8| Homo sapiens BAC clone RP11-59F3 from 2, complete sequence
          Length = 105884

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 234  atggcatcttcttctgtact 253
            ||||||||||||||||||||
Sbjct: 1325 atggcatcttcttctgtact 1306

>dbj|BS000062.1| Pan troglodytes chromosome 22 clone:PTB-045C17, map 22, complete
             sequences
          Length = 171187

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 204   atgtagttcctcagcatattacac 227
             ||||||||||||||||| ||||||
Sbjct: 50307 atgtagttcctcagcatcttacac 50284

>dbj|AP005300.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OJ2055_H10
          Length = 119290

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 233    aatggcatcttcttctgtacttga 256
              |||||||||||||||||| |||||
Sbjct: 102522 aatggcatcttcttctgtccttga 102499

>dbj|AP004747.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0407A09
          Length = 103788

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 233   aatggcatcttcttctgtacttga 256
             |||||||||||||||||| |||||
Sbjct: 31672 aatggcatcttcttctgtccttga 31649

>dbj|AP001679.1| Homo sapiens genomic DNA, chromosome 21q, section 23/105
          Length = 340000

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 204    atgtagttcctcagcatattacac 227
              ||||||||||||||||| ||||||
Sbjct: 125081 atgtagttcctcagcatcttacac 125058

>gb|AC118620.10| Mus musculus chromosome 3, clone RP24-571H24, complete sequence
          Length = 182926

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 127   cagccaaagcaaaaccacag 146
             ||||||||||||||||||||
Sbjct: 31660 cagccaaagcaaaaccacag 31641

>gb|AC004606.1|AC004606 Homo sapiens chromosome 17, clone hRPC.1043_H_15, complete sequence
          Length = 99512

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 235   tggcatcttcttctgtactt 254
             ||||||||||||||||||||
Sbjct: 80694 tggcatcttcttctgtactt 80675

>dbj|AP001251.1| Homo sapiens genomic DNA, chromosome 21q21.1-q21.2, clone:B5P9, LL56-APP
              region, complete sequence
          Length = 150681

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 204    atgtagttcctcagcatattacac 227
              ||||||||||||||||| ||||||
Sbjct: 113304 atgtagttcctcagcatcttacac 113281


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,753,403
Number of Sequences: 3902068
Number of extensions: 2753403
Number of successful extensions: 55609
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 55559
Number of HSP's gapped (non-prelim): 50
length of query: 304
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 282
effective length of database: 17,147,199,772
effective search space: 4835510335704
effective search space used: 4835510335704
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)