ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal9i04 |
|---|---|
| Clone Library Name | barley_pub |
>CR1BC_BACTM (Q45774) Pesticidal crystal protein cry1Bc (Insecticidal| delta-endotoxin CryIB(c)) (Crystaline entomocidal protoxin) (140 kDa crystal protein) Length = 1233 Score = 38.9 bits (89), Expect = 0.011 Identities = 25/97 (25%), Positives = 45/97 (46%), Gaps = 4/97 (4%) Frame = +1 Query: 268 QELHDKVRFAETRDGASFRTLFGNAIQLGVISRRRAYQETIQYERDRNAGFLSPFGY--S 441 Q ++R+A T D F + G + +G SR + ++Y R AGF +PF + + Sbjct: 555 QRYRVRIRYASTTDLQFFTRINGTTVNIGNFSRTMNRGDNLEYRSFRTAGFSTPFNFLNA 614 Query: 442 TPTVTSAVDAICSLEWY--WLLALKSQVSIEGNYPLK 546 T T + + E Y + + ++V+ E Y L+ Sbjct: 615 QSTFTLGAQSFSNQEVYIDRVEFVPAEVTFEAEYDLE 651
>CR1BB_BACTU (Q45739) Pesticidal crystal protein cry1Bb (Insecticidal| delta-endotoxin CryIB(b)) (Crystaline entomocidal protoxin) (140 kDa crystal protein) Length = 1229 Score = 38.9 bits (89), Expect = 0.011 Identities = 25/97 (25%), Positives = 45/97 (46%), Gaps = 4/97 (4%) Frame = +1 Query: 268 QELHDKVRFAETRDGASFRTLFGNAIQLGVISRRRAYQETIQYERDRNAGFLSPFGY--S 441 Q ++R+A T D F + G + +G SR + ++Y R AGF +PF + + Sbjct: 555 QRYRVRIRYASTTDLQFFTRINGTTVNIGNFSRTMNRGDNLEYRSFRTAGFSTPFNFLNA 614 Query: 442 TPTVTSAVDAICSLEWY--WLLALKSQVSIEGNYPLK 546 T T + + E Y + + ++V+ E Y L+ Sbjct: 615 QSTFTLGAQSFSNQEVYIDRVEFVPAEVTFEAEYDLE 651
>CR1GA_BACTU (Q45746) Pesticidal crystal protein cry1Ga (Insecticidal| delta-endotoxin CryIG(a)) (Crystaline entomocidal protoxin) (132 kDa crystal protein) Length = 1166 Score = 38.5 bits (88), Expect = 0.015 Identities = 21/68 (30%), Positives = 32/68 (47%) Frame = +1 Query: 268 QELHDKVRFAETRDGASFRTLFGNAIQLGVISRRRAYQETIQYERDRNAGFLSPFGYSTP 447 Q ++R+A T D + + G I +G S + +QY R R AGF +PF +S Sbjct: 506 QRYRVRIRYASTTDLQFYTNINGTTINIGNFSSTMDSGDDLQYGRFRVAGFTTPFTFSDA 565 Query: 448 TVTSAVDA 471 T + A Sbjct: 566 NSTFTIGA 573
>CR1ID_BACTU (Q9XDL1) Pesticidal crystal protein cry1Id (Insecticidal| delta-endotoxin CryII(d)) (Crystaline entomocidal protoxin) (81 kDa crystal protein) Length = 719 Score = 35.0 bits (79), Expect = 0.16 Identities = 22/82 (26%), Positives = 37/82 (45%) Frame = +1 Query: 283 KVRFAETRDGASFRTLFGNAIQLGVISRRRAYQETIQYERDRNAGFLSPFGYSTPTVTSA 462 ++R+A T + ++ G AI G S E + Y+ R GF +PF +S T Sbjct: 562 RIRYASTTNLEFHTSINGKAINQGNFSATMNRGEDLDYKAFRTVGFTTPFSFSNAQSTFT 621 Query: 463 VDAICSLEWYWLLALKSQVSIE 528 + A W +L ++V I+ Sbjct: 622 IGA-------WNFSLGNEVYID 636
>XSP1_ARATH (Q9LLL8) Xylem serine proteinase 1 precursor (EC 3.4.21.-) (AtXSP1)| (Cucumisin-like protein) Length = 749 Score = 33.9 bits (76), Expect = 0.36 Identities = 19/80 (23%), Positives = 33/80 (41%) Frame = +1 Query: 25 ARSILKAALIQRKIKSNVSLNDGDGGNIEDITTSTGASGRKIAGSMFASESSLEVRGGTD 204 AR +L ++K+K V + GG +E S G +G I + + + + T Sbjct: 385 ARYCFSDSLDRKKVKGKVMVCRMGGGGVESTIKSYGGAGAIIVSDQYLDNAQIFMAPATS 444 Query: 205 ITLDALDAYLKYLEGTGKAS 264 + D +Y+ T AS Sbjct: 445 VNSSVGDIIYRYINSTRSAS 464
>CR1JA_BACTU (Q45738) Pesticidal crystal protein cry1Ja (Insecticidal| delta-endotoxin CryIJ(a)) (Crystaline entomocidal protoxin) (133 kDa crystal protein) Length = 1167 Score = 33.9 bits (76), Expect = 0.36 Identities = 24/83 (28%), Positives = 36/83 (43%), Gaps = 2/83 (2%) Frame = +1 Query: 250 TGKASWQELHDKVRFAETRDGASFRTLFGNAIQLGVISRRRAYQETIQYERDRNAGFLSP 429 TG S Q ++R+A T D F + G ++ G R + ++ R AGF +P Sbjct: 504 TGPLS-QRYRVRIRYASTTDLQFFTRINGTSVNQGNFQRTMNRGDNLESGNFRTAGFSTP 562 Query: 430 FGYST--PTVTSAVDAICSLEWY 492 F +S T T A + E Y Sbjct: 563 FSFSNAQSTFTLGTQAFSNQEVY 585
>PK3CG_PIG (O02697) Phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic| subunit gamma isoform (EC 2.7.1.153) (PI3-kinase p110 subunit gamma) (PtdIns-3-kinase subunit p110) (PI3K) (PI3Kgamma) (p120-PI3K) Length = 1102 Score = 33.9 bits (76), Expect = 0.36 Identities = 20/72 (27%), Positives = 35/72 (48%), Gaps = 1/72 (1%) Frame = +1 Query: 256 KASWQELHDKVRFAETRDGASF-RTLFGNAIQLGVISRRRAYQETIQYERDRNAGFLSPF 432 K W E++DK + +T D + + L + Q+ V+ R +ET+ ++R NA Sbjct: 103 KGQWYEIYDKYQVVQTLDCLRYWKVLHRSPGQIHVVQRHAPSEETLAFQRQLNA----LI 158 Query: 433 GYSTPTVTSAVD 468 GY V++ D Sbjct: 159 GYDVTDVSNVHD 170
>CR1IA_BACTK (Q45752) Pesticidal crystal protein cry1Ia (Insecticidal| delta-endotoxin CryII(a)) (Crystaline entomocidal protoxin) (81 kDa crystal protein) Length = 719 Score = 32.7 bits (73), Expect = 0.81 Identities = 19/68 (27%), Positives = 29/68 (42%) Frame = +1 Query: 268 QELHDKVRFAETRDGASFRTLFGNAIQLGVISRRRAYQETIQYERDRNAGFLSPFGYSTP 447 Q ++R+A T D ++ G AI G S E + Y+ R GF +PF + Sbjct: 557 QRYRVRIRYASTTDLQFHTSINGKAINQGNFSATMNRGEDLDYKTFRTVGFTTPFSFLDV 616 Query: 448 TVTSAVDA 471 T + A Sbjct: 617 QSTFTIGA 624
>CR1FB_BACTM (O66377) Pesticidal crystal protein cry1Fb (Insecticidal| delta-endotoxin CryIF(b)) (Crystaline entomocidal protoxin) (132 kDa crystal protein) Length = 1169 Score = 32.3 bits (72), Expect = 1.1 Identities = 24/83 (28%), Positives = 35/83 (42%), Gaps = 2/83 (2%) Frame = +1 Query: 250 TGKASWQELHDKVRFAETRDGASFRTLFGNAIQLGVISRRRAYQETIQYERDRNAGFLSP 429 TG S Q ++R+A T D F + G ++ G R ++ R AGF +P Sbjct: 509 TGPLS-QRYRVRIRYASTTDLQFFTRINGTSVNQGNFQRTMNRGGNLESGNFRTAGFSTP 567 Query: 430 FGYST--PTVTSAVDAICSLEWY 492 F +S T T A + E Y Sbjct: 568 FSFSNAQSTFTLGTQAFSNQEVY 590
>CR1IC_BACTU (O87404) Pesticidal crystal protein cry1Ic (Insecticidal| delta-endotoxin CryII(c)) (Crystaline entomocidal protoxin) (81 kDa crystal protein) Length = 719 Score = 32.0 bits (71), Expect = 1.4 Identities = 19/68 (27%), Positives = 29/68 (42%) Frame = +1 Query: 268 QELHDKVRFAETRDGASFRTLFGNAIQLGVISRRRAYQETIQYERDRNAGFLSPFGYSTP 447 Q ++ +A T D ++ G AI G S E + Y+ R GF +PF +S Sbjct: 557 QRYRVRMSYASTTDLQFHTSINGKAINQGNFSATMNRGEDLDYKTFRTVGFTTPFSFSDV 616 Query: 448 TVTSAVDA 471 T + A Sbjct: 617 QSTFTIGA 624
>TRM1_YEAST (P15565) N(2),N(2)-dimethylguanosine tRNA methyltransferase,| mitochondrial precursor (EC 2.1.1.32) (tRNA(guanine-26,N(2)-N(2)) methyltransferase) (tRNA 2,2-dimethylguanosine-26 methyltransferase) (tRNA(m(2,2)G26)dimethyltransferase) Length = 570 Score = 32.0 bits (71), Expect = 1.4 Identities = 30/113 (26%), Positives = 48/113 (42%), Gaps = 1/113 (0%) Frame = +1 Query: 4 VPIKRTSARSILKAALIQRKIKSNVSLNDGDGGNIEDITTSTGASGRKIAGSMFASESSL 183 +P+KR + +LKAA+ KIK+N + NIED + + Sbjct: 7 IPLKRANLHGMLKAAI--SKIKANFTAYGAPRINIEDFNIVKEGKAEILFPKKETVFYNP 64 Query: 184 EVRGGTDITLDALDAYLK-YLEGTGKASWQELHDKVRFAETRDGASFRTLFGN 339 + D+++ + A+ Y E G+ + K R AET D +S R GN Sbjct: 65 IQQFNRDLSVTCIKAWDNLYGEECGQKRNNKKSKKKRCAETNDDSSKRQKMGN 117
>CHOD_STRS0 (P12676) Cholesterol oxidase precursor (EC 1.1.3.6) (CHOD)| Length = 546 Score = 31.6 bits (70), Expect = 1.8 Identities = 22/62 (35%), Positives = 30/62 (48%), Gaps = 1/62 (1%) Frame = +1 Query: 130 GASGRKIAGSMFASESSLEVRGGTDITLDALD-AYLKYLEGTGKASWQELHDKVRFAETR 306 G R+ AG + S + EV G + +LD YL GTGK + Q LH +T+ Sbjct: 235 GYMQREAAGEVPKSALATEVIYGNNHGKQSLDKTYLAAALGTGKVTIQTLHQVKTIRQTK 294 Query: 307 DG 312 DG Sbjct: 295 DG 296
>PSMB_THEAC (P28061) Proteasome beta subunit precursor (EC 3.4.25.1)| (Multicatalytic endopeptidase complex beta subunit) Length = 211 Score = 31.2 bits (69), Expect = 2.3 Identities = 27/98 (27%), Positives = 41/98 (41%), Gaps = 1/98 (1%) Frame = +1 Query: 88 DGDGGNIEDITTSTGASGRKIAGSMFASES-SLEVRGGTDITLDALDAYLKYLEGTGKAS 264 D GG++EDI STG+ + G + + S + V G D+ + A+ A Sbjct: 122 DAAGGSVEDIYASTGSGSPFVYGVLESQYSEKMTVDEGVDLVIRAISA------------ 169 Query: 265 WQELHDKVRFAETRDGASFRTLFGNAIQLGVISRRRAY 378 A+ RD AS G I + VI+R+ Y Sbjct: 170 ----------AKQRDSAS-----GGMIDVAVITRKDGY 192
>ATKB2_LISIN (Q926K7) Potassium-transporting ATPase B chain 2 (EC 3.6.3.12)| (Potassium-translocating ATPase B chain 2) (ATP phosphohydrolase [potassium-transporting] B chain 2) (Potassium-binding and translocating subunit B 2) Length = 686 Score = 30.8 bits (68), Expect = 3.1 Identities = 25/92 (27%), Positives = 41/92 (44%), Gaps = 9/92 (9%) Frame = +1 Query: 40 KAALIQRKIKSNVSLNDGDGGNI---------EDITTSTGASGRKIAGSMFASESSLEVR 192 K LI I +++ N +G +I ED+ T+ + I + S +++ Sbjct: 329 KNYLIHYAILASIQDNTPEGKSIVTLGKDLLKEDLDTNDIRENQFIEFTAQTRMSGVDLA 388 Query: 193 GGTDITLDALDAYLKYLEGTGKASWQELHDKV 288 GT I A DA +KY++ G +L DKV Sbjct: 389 DGTRIRKGAYDAIIKYIKNIGGEIPHDLEDKV 420
>UBPY_CAEEL (Q09931) Probable ubiquitin carboxyl-terminal hydrolase K02C4.3 (EC| 3.1.2.15) (Ubiquitin thioesterase) (Ubiquitin-specific processing protease) (Deubiquitinating enzyme) Length = 1302 Score = 30.4 bits (67), Expect = 4.0 Identities = 27/94 (28%), Positives = 41/94 (43%), Gaps = 1/94 (1%) Frame = +1 Query: 214 DALDAY-LKYLEGTGKASWQELHDKVRFAETRDGASFRTLFGNAIQLGVISRRRAYQETI 390 DA AY L Y+ A W DK+ E +F T+ + +Q V+ +R ++E + Sbjct: 781 DAPSAYMLMYVRSD--AEWLVSADKLTALE-----AFETIPPD-LQEKVLQKRDEFKEKL 832 Query: 391 QYERDRNAGFLSPFGYSTPTVTSAVDAICSLEWY 492 Q R+ F +PTV S + S WY Sbjct: 833 QRFRENKEFNYQQFSVDSPTVQSTEETPSSFSWY 866
>CRYD_SYNY3 (P77967) Cryptochrome DASH| Length = 489 Score = 30.0 bits (66), Expect = 5.2 Identities = 16/42 (38%), Positives = 25/42 (59%), Gaps = 3/42 (7%) Frame = +1 Query: 292 FAETRDG---ASFRTLFGNAIQLGVISRRRAYQETIQYERDR 408 + ETR+G A + + F + LG +S R YQE +YE++R Sbjct: 236 YKETRNGMVGADYSSKFSPWLALGCLSPRFIYQEVKRYEQER 277
>PMD1_YEAST (P32634) Negative regulator of sporulation PMD1| Length = 1753 Score = 29.3 bits (64), Expect = 8.9 Identities = 25/84 (29%), Positives = 41/84 (48%), Gaps = 4/84 (4%) Frame = -1 Query: 335 PNSVRNEAPSLVSAKRTLSCNSCQLAFPVPSRYFR*ASKASSVISVPPLTSSELSDAN-- 162 P+S+ +P+ + R S +A P SR AS AS+ SV TS ++N Sbjct: 851 PSSISKASPAEKAFSRRKSSALRFIASPNQSRQTSFASTASTA-SVVSSTSGRRRNSNQI 909 Query: 161 --IEPAIFLPDAPVLVVISSMFPP 96 + + LP++P+L V++ PP Sbjct: 910 SHLGSSASLPNSPILPVLNIPLPP 933
>MCS4_SCHPO (P87323) Response regulator mcs4 (Mitotic catastrophe suppressor 4)| Length = 522 Score = 29.3 bits (64), Expect = 8.9 Identities = 17/64 (26%), Positives = 29/64 (45%) Frame = -1 Query: 257 FPVPSRYFR*ASKASSVISVPPLTSSELSDANIEPAIFLPDAPVLVVISSMFPPSPSFKE 78 FP+ + A + S + PP SSEL + P+ +L V+ + +P F + Sbjct: 35 FPIRISQYYDAPELSIRVVAPPNASSELQSRELS-----PNESILFVMETYYPHGQDFND 89 Query: 77 TLLL 66 LL+ Sbjct: 90 ALLV 93 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.317 0.133 0.396 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 83,385,117 Number of Sequences: 219361 Number of extensions: 1721813 Number of successful extensions: 4358 Number of sequences better than 10.0: 18 Number of HSP's better than 10.0 without gapping: 4255 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4356 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 5158951200 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
