ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal9h11
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ref|XM_963404.1| PREDICTED: Tribolium castaneum similar to CG506... 42 0.49
2gb|AF270937.1|AF270937 Plutella xylostella granulovirus genome, ... 42 0.49
3ref|XM_391164.1| Gibberella zeae PH-1 chromosome 3 hypothetical ... 40 2.0
4ref|XM_535847.2| PREDICTED: Canis familiaris similar to schwanno... 38 7.7

>ref|XM_963404.1| PREDICTED: Tribolium castaneum similar to CG5067-PA (LOC656907), mRNA
          Length = 2670

 Score = 42.1 bits (21), Expect = 0.49
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 34   ctccgacgacgaccagatggt 54
            |||||||||||||||||||||
Sbjct: 1224 ctccgacgacgaccagatggt 1244



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>gb|AF270937.1|AF270937 Plutella xylostella granulovirus genome, complete sequence
          Length = 100999

 Score = 42.1 bits (21), Expect = 0.49
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 28    tccagcctccgacgacgacca 48
             |||||||||||||||||||||
Sbjct: 83876 tccagcctccgacgacgacca 83896



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>ref|XM_391164.1| Gibberella zeae PH-1 chromosome 3 hypothetical protein (FG10988.1)
             partial mRNA
          Length = 36000

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 40    cgacgaccagatggtgagct 59
             ||||||||||||||||||||
Sbjct: 14887 cgacgaccagatggtgagct 14868



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>ref|XM_535847.2| PREDICTED: Canis familiaris similar to schwannomin interacting
           protein 1 (LOC478678), mRNA
          Length = 2439

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 81  tccttccccctccgggccg 99
           |||||||||||||||||||
Sbjct: 400 tccttccccctccgggccg 382


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 654,930
Number of Sequences: 3902068
Number of extensions: 654930
Number of successful extensions: 44999
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 44995
Number of HSP's gapped (non-prelim): 4
length of query: 160
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 138
effective length of database: 17,147,199,772
effective search space: 2366313568536
effective search space used: 2366313568536
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
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