ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | baal9f20 |
|---|---|
| Clone Library Name | barley_pub |
>HME2_CHICK (Q05917) Homeobox protein engrailed-2 (Gg-En-2)| Length = 288 Score = 35.0 bits (79), Expect = 0.14 Identities = 37/151 (24%), Positives = 58/151 (38%), Gaps = 14/151 (9%) Frame = +2 Query: 77 PFDPQHPLQSTIASKITNLATKVTNKVRSRVKMDENGMVREGG--SGESQCSDRDNKDGP 250 P DP HP ++TN + E G +E G +GE + +++ P Sbjct: 35 PGDPPHPHPHP---------HRITNFFIDNILRPEFGRRKEAGGTAGEPRRPGAESRRSP 85 Query: 251 SSGPSTPRGDAPHGAFGTEENSPGKSTKTNGDESEAKIGLHKILS-----SKAEALLNKK 415 ++ P P G G SPG+ G+ A + LH + EA L + Sbjct: 86 AAAAPAPGAPVPGGGGGGGGGSPGR-----GEGGPAALALHGAAKKGGDPAALEAALKAR 140 Query: 416 GITWPWKGREND------GSDCRNQ-MTWPS 487 G++ +D GS+ NQ M WP+ Sbjct: 141 GLSGAELSVSSDSDSSQAGSNAGNQPMLWPA 171
>TACC3_HUMAN (Q9Y6A5) Transforming acidic coiled-coil-containing protein 3| (ERIC-1) Length = 838 Score = 32.7 bits (73), Expect = 0.71 Identities = 17/62 (27%), Positives = 27/62 (43%) Frame = +2 Query: 170 KMDENGMVREGGSGESQCSDRDNKDGPSSGPSTPRGDAPHGAFGTEENSPGKSTKTNGDE 349 KMD+ + GG +S CS+ + P + P + H TEE P S + + Sbjct: 409 KMDDPNFIPFGGDTKSGCSEAQPPESPETRLGQPAAEQLHAGPATEEPGPCLSQQLHSAS 468 Query: 350 SE 355 +E Sbjct: 469 AE 470
>Y2226_CORGL (Q8NNH6) Protein Cgl2226/cg2444 (P24)| Length = 181 Score = 32.7 bits (73), Expect = 0.71 Identities = 18/54 (33%), Positives = 26/54 (48%) Frame = +2 Query: 140 KVTNKVRSRVKMDENGMVREGGSGESQCSDRDNKDGPSSGPSTPRGDAPHGAFG 301 +V N++R + +G+V G G+ + R G GP PR D P G FG Sbjct: 119 EVINEIRDGISSFVDGIVN--GLGQGRRGGRYGDFGGPRGPRGPRNDGPFGPFG 170
>LYST_HUMAN (Q99698) Lysosomal trafficking regulator (Beige homolog)| Length = 3801 Score = 32.3 bits (72), Expect = 0.92 Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 2/53 (3%) Frame = -2 Query: 512 GHSLAHHA--MMARSFDFCNQTHHSPALSKAMLSLSCSTMPLLLNSRSCGDLF 360 G LAHH + S +HH+ L + +L + T+P+LL SR DLF Sbjct: 742 GVELAHHCQHLSVTSAQSHVCSHHNQCLPQDVLQIYVKTLPILLKSRVIRDLF 794
>HRX_MOUSE (P55200) Zinc finger protein HRX (ALL-1) (Fragment)| Length = 3866 Score = 32.0 bits (71), Expect = 1.2 Identities = 29/113 (25%), Positives = 40/113 (35%), Gaps = 9/113 (7%) Frame = +2 Query: 140 KVTNKVRSRVKMDENGM-VREGGSGESQCSDRDNKDGPSSGPSTPRGDAPHGAFGTEENS 316 KV + +RS + + M R G S+ S SS S P A Sbjct: 637 KVFSPIRSEPRSPSHSMRTRSGRLSTSELSPLTPPSSVSSSLSIPVSPLAASALNPTFTF 696 Query: 317 PGKSTKTNGDESEAKIGLHKILSSKAEALLNKKGITWPW--------KGREND 451 P S +GD +E K S+ AE + +PW KGR+ D Sbjct: 697 PSHSLTQSGDSTEKNQRARKQTSAPAEPFSSNSPALFPWFTPGSQTEKGRKKD 749
>JIP4_MOUSE (Q58A65) C-jun-amino-terminal kinase-interacting protein 4| (JNK-interacting protein 4) (JIP-4) (JNK-associated leucine-zipper protein) (JLP) (Sperm-associated antigen 9) (Mitogen-activated protein kinase 8-interacting protein 4) (JNK/SAPK-asso Length = 1321 Score = 32.0 bits (71), Expect = 1.2 Identities = 31/125 (24%), Positives = 50/125 (40%), Gaps = 20/125 (16%) Frame = +2 Query: 176 DENGMVREGGSGESQCSDRDNKDGPSSGPSTPRGDAPHG-AFGTEENSPGKSTK------ 334 DE + +GGS + + N D + P TP + G GT+ ++ + +K Sbjct: 262 DELSDISQGGSKATTPASTANSDVSAIPPDTPSKEDNEGFVKGTDTSNKSEISKHIEVQV 321 Query: 335 --------TNGDESEAKIGLHKILSSKAEALLNK-----KGITWPWKGRENDGSDCRNQM 475 T E+E K + I+ S E ++K KG + P KG EN D + Sbjct: 322 AQETRNVSTESGENEEKSEVQAIIESTPELDMDKDLSGYKGSSTPTKGIENKAFDRNTES 381 Query: 476 TWPSL 490 + L Sbjct: 382 LFEEL 386
>PHOSP_NDVB (P24698) Phosphoprotein (Protein P)| Length = 395 Score = 31.6 bits (70), Expect = 1.6 Identities = 28/106 (26%), Positives = 39/106 (36%), Gaps = 6/106 (5%) Frame = +2 Query: 233 DNKDGPSSGPSTPRGDAPHGA-FGTEENSPGKSTKTNGDESEAKIGLHKILSSKAEALLN 409 D +D PSTP PH + T + P +++ + G L + L N Sbjct: 67 DRQDRSDKQPSTPEQATPHDSPPATSADQPPTQATDEAVDTQLRTGASNSLLLMLDKLSN 126 Query: 410 -----KKGITWPWKGRENDGSDCRNQMTWPSLHGEQENGQNHPKIA 532 KKG+ W N + Q + PS QE QN K A Sbjct: 127 KSSNAKKGL-WSSPQEGNHQRPTQQQGSQPSRGNSQERPQNQVKAA 171
>HCN2_RAT (Q9JKA9) Potassium/sodium hyperpolarization-activated cyclic| nucleotide-gated channel 2 Length = 863 Score = 31.6 bits (70), Expect = 1.6 Identities = 26/89 (29%), Positives = 35/89 (39%), Gaps = 7/89 (7%) Frame = +2 Query: 74 NPFDPQHPLQSTIASKITNLATKVTNKVRSRVKMDENGMVREGGSGESQCSDRDNKDGPS 253 NP P HP + + L ++ ++ K NG E G GE QCS +GP+ Sbjct: 43 NPTTPSHPESADEPGPRSRLCSRDSSCTPGAAKGGANG---ECGRGEPQCS----PEGPA 95 Query: 254 SGP-------STPRGDAPHGAFGTEENSP 319 GP G A G+EE P Sbjct: 96 RGPKVSFSCRGAASGPAAAEEAGSEEAGP 124
>FBX31_HUMAN (Q5XUX0) F-box only protein 31| Length = 539 Score = 31.6 bits (70), Expect = 1.6 Identities = 15/65 (23%), Positives = 29/65 (44%) Frame = +2 Query: 128 NLATKVTNKVRSRVKMDENGMVREGGSGESQCSDRDNKDGPSSGPSTPRGDAPHGAFGTE 307 N +++ +VR RV+ ++ E G G + R+++ P+ + P G G + Sbjct: 364 NELSRIVLEVRERVRQEQQEGGHEAGEGRGRQGPRESQPSPAQPRAEAPSKGPDGTPGED 423 Query: 308 ENSPG 322 PG Sbjct: 424 GGEPG 428
>RPN8_NEUCR (Q8WZY4) 26S proteasome regulatory subunit rpn-8| Length = 352 Score = 30.8 bits (68), Expect = 2.7 Identities = 19/77 (24%), Positives = 36/77 (46%) Frame = +2 Query: 104 STIASKITNLATKVTNKVRSRVKMDENGMVREGGSGESQCSDRDNKDGPSSGPSTPRGDA 283 S++ IT + NK+++R + +EN ++ G + D K+G P+ G++ Sbjct: 284 SSLIRAITAFHDLIENKIQNRQQQEENDAKKKEGENGEKKEGADKKEG---SPAAANGES 340 Query: 284 PHGAFGTEENSPGKSTK 334 +ENSP + K Sbjct: 341 KE-----KENSPKEKKK 352
>REXO4_HUMAN (Q9GZR2) RNA exonuclease 4 (EC 3.1.-.-) (Exonuclease XPMC2) (hPMC2)| (Prevents mitotic catastrophe 2 protein homolog) Length = 422 Score = 30.8 bits (68), Expect = 2.7 Identities = 29/100 (29%), Positives = 44/100 (44%), Gaps = 5/100 (5%) Frame = +2 Query: 62 LLNRNPFDPQHPLQSTIASKITNLATKVTNKVRSRVKMDENGMVREGGSGESQCSDRDNK 241 LL + P+ PL I+ + +K K+ + K + + V+ GE + +D + Sbjct: 77 LLKQKSQAPEKPLV------ISQMGSKKKPKIIQQNKKETSPQVK----GEEMPAGKDQE 126 Query: 242 DGPSSGPSTPRGD--AP---HGAFGTEENSPGKSTKTNGD 346 S PS + D AP A GTE N G +TNGD Sbjct: 127 ASRGSVPSGSKMDRRAPVPRTKASGTEHNKKGTKERTNGD 166
>OGFR_HUMAN (Q9NZT2) Opioid growth factor receptor (OGFr) (Zeta-type opioid| receptor) (7-60 protein) Length = 677 Score = 30.8 bits (68), Expect = 2.7 Identities = 24/85 (28%), Positives = 33/85 (38%), Gaps = 6/85 (7%) Frame = +2 Query: 131 LATKVTNKVRSRVKMDEN-GMVREGGSGESQCSDRDNKDGPSSGPSTPRG-----DAPHG 292 L +V +KVR R K+DE G SG +Q PS P + G Sbjct: 447 LGARVADKVRKRRKVDEGAGDSAAVASGGAQTLALAGSPAPSGHPKAGHSENGVEEDTEG 506 Query: 293 AFGTEENSPGKSTKTNGDESEAKIG 367 G +E +PG ++T G G Sbjct: 507 RTGPKEGTPGSPSETPGPSPAGPAG 531
>NU4M_PONPY (P03908) NADH-ubiquinone oxidoreductase chain 4 (EC 1.6.5.3) (NADH| dehydrogenase subunit 4) Length = 459 Score = 30.8 bits (68), Expect = 2.7 Identities = 28/96 (29%), Positives = 49/96 (51%), Gaps = 1/96 (1%) Frame = -1 Query: 402 NASAFELKILWRPILASDSSPFVLVDFPGEFSSVPKAPCGASPLGVLGPLDGPSLLSRSE 223 N + L I + P+L + + L + FSS P + +PL +L P ++ S+ Sbjct: 26 NTTTHSLIISFIPLLFLNQTNSNLSSYSLLFSSDPLS----TPLLMLTTWLLPLMIMASQ 81 Query: 222 H*LSPLPPSR-TMPFSSILTLERTLFVTLVAKFVIL 118 H LS PPSR + S +++L+ +L +T A +I+ Sbjct: 82 HHLSNEPPSRKKLYLSMLISLQISLIMTFTATELIM 117
>VCIP1_MOUSE (Q8CDG3) Deubiquitinating protein VCIP135 (EC 3.4.22.-)| (Valosin-containing protein p97/p47 complex-interacting protein p135) (Valosin-containing protein p97/p47 complex-interacting protein 1) Length = 1220 Score = 30.4 bits (67), Expect = 3.5 Identities = 20/70 (28%), Positives = 33/70 (47%) Frame = +2 Query: 101 QSTIASKITNLATKVTNKVRSRVKMDENGMVREGGSGESQCSDRDNKDGPSSGPSTPRGD 280 + TI IT A+ + + ++K ++ G R S +DGPSS P+TP Sbjct: 712 ERTIQQNITEQASVMQKRKTEKLKQEQKGQPRT-------VSPSTIRDGPSSAPATPT-K 763 Query: 281 APHGAFGTEE 310 AP+ ++E Sbjct: 764 APYSPTTSKE 773
>ANR11_HUMAN (Q6UB99) Ankyrin repeat domain-containing protein 11 (Ankyrin| repeat-containing cofactor 1) Length = 2664 Score = 30.4 bits (67), Expect = 3.5 Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 1/46 (2%) Frame = +2 Query: 86 PQHPLQSTIASKIT-NLATKVTNKVRSRVKMDENGMVREGGSGESQ 220 P+HP QST+ K T N A+K +KV R + E + R G+++ Sbjct: 138 PKHPSQSTVCQKGTPNSASKTKDKVNKRNERGETRLHRAAIRGDAR 183
>DALY_DROME (Q24114) Division abnormally delayed protein precursor (Dally| protein) Length = 626 Score = 30.4 bits (67), Expect = 3.5 Identities = 21/58 (36%), Positives = 25/58 (43%) Frame = +2 Query: 179 ENGMVREGGSGESQCSDRDNKDGPSSGPSTPRGDAPHGAFGTEENSPGKSTKTNGDES 352 +N M G GE Q D + + G + G GD PH E S G T TN ES Sbjct: 542 QNDMGEGSGGGEGQIGDDEEEYGGAHGSGDGSGDGPHTPI---EESEG--TTTNEVES 594
>VCIP1_RAT (Q8CF97) Deubiquitinating protein VCIP135 (EC 3.4.22.-)| (Valosin-containing protein p97/p47 complex-interacting protein p135) (Valosin-containing protein p97/p47 complex-interacting protein 1) Length = 1221 Score = 30.4 bits (67), Expect = 3.5 Identities = 20/70 (28%), Positives = 33/70 (47%) Frame = +2 Query: 101 QSTIASKITNLATKVTNKVRSRVKMDENGMVREGGSGESQCSDRDNKDGPSSGPSTPRGD 280 + TI IT A+ + + ++K ++ G R S +DGPSS P+TP Sbjct: 712 ERTIQQNITEQASVMQKRKTEKLKQEQKGQPRT-------VSPSTIRDGPSSAPATPT-K 763 Query: 281 APHGAFGTEE 310 AP+ ++E Sbjct: 764 APYSPTTSKE 773
>VCIP1_HUMAN (Q96JH7) Deubiquitinating protein VCIP135 (EC 3.4.22.-)| (Valosin-containing protein p97/p47 complex-interacting protein p135) (Valosin-containing protein p97/p47 complex-interacting protein 1) Length = 1222 Score = 30.4 bits (67), Expect = 3.5 Identities = 20/70 (28%), Positives = 33/70 (47%) Frame = +2 Query: 101 QSTIASKITNLATKVTNKVRSRVKMDENGMVREGGSGESQCSDRDNKDGPSSGPSTPRGD 280 + TI IT A+ + + ++K ++ G R S +DGPSS P+TP Sbjct: 713 ERTIQQNITEQASVMQKRKTEKLKQEQKGQPRT-------VSPSTIRDGPSSAPATPT-K 764 Query: 281 APHGAFGTEE 310 AP+ ++E Sbjct: 765 APYSPTTSKE 774
>TOPRS_DROME (Q9V8P9) Ubiquitin-protein E3 ligase Topors (EC 6.3.2.-)| (SUMO1-protein E3 ligase Topors) (Topoisomerase I-binding RING finger protein) (Topoisomerase I-binding arginine/serine-rich protein) (dTopors) Length = 1038 Score = 30.0 bits (66), Expect = 4.6 Identities = 30/139 (21%), Positives = 62/139 (44%), Gaps = 2/139 (1%) Frame = +2 Query: 116 SKITNLATKVTNKVRSRVKMDENGMVREGGSGESQCSDRDNKDGPSSGPSTPRGDAPHGA 295 SK ++ + + K +++ + E ++ + Q + D PSS GD+ + Sbjct: 698 SKKESIGKRTSRKRKAKDQNMEMLEQQQISQKKPQRQPESSSDSPSSSDDESGGDSSESS 757 Query: 296 FGTEENSPGKSTKTNGDESEAKIGLHKILSS-KAEALL-NKKGITWPWKGRENDGSDCRN 469 G + KS+ + D+S + L + ++ KAEA L ++K + + ++D + + Sbjct: 758 -GQPNTNNNKSSSDSDDDSAVNMQLSALRATLKAEATLEDRKPVKLELQLPDDDQAGPLH 816 Query: 470 QMTWPSLHGEQENGQNHPK 526 PS + E G + PK Sbjct: 817 SRMTPSPREDNEPGCSAPK 835
>MARCS_BOVIN (P12624) Myristoylated alanine-rich C-kinase substrate (MARCKS)| (ACAMP-81) Length = 331 Score = 30.0 bits (66), Expect = 4.6 Identities = 24/85 (28%), Positives = 33/85 (38%), Gaps = 2/85 (2%) Frame = +2 Query: 197 EGGSGESQCSDRDNKDGPSSGPSTPRGDAPHG--AFGTEENSPGKSTKTNGDESEAKIGL 370 EG +G S +D G ++ + G AP A EE + G+ GD EAK Sbjct: 183 EGAAGASAEGGKDEASGGAAAAAGEAGAAPGEPTAAPGEEAAAGEEGAAGGDPQEAKPEE 242 Query: 371 HKILSSKAEALLNKKGITWPWKGRE 445 + K A K + P K E Sbjct: 243 AAVAPEKPPASEEAKAVEEPSKAEE 267
>DBP_MOUSE (Q60925) D site-binding protein (Albumin D box-binding protein)| (Albumin D-element-binding protein) Length = 325 Score = 30.0 bits (66), Expect = 4.6 Identities = 25/72 (34%), Positives = 33/72 (45%), Gaps = 6/72 (8%) Frame = -1 Query: 342 PFVLVDFPG-EFSSVPKAPCGA-----SPLGVLGPLDGPSLLSRSEH*LSPLPPSRTMPF 181 P V PG E + AP GA SP G GP+ GPSL +PL RT+PF Sbjct: 59 PSAPVPGPGLETAGPADAPSGAVSGGGSPRGRSGPVAGPSL-------FAPLLWERTLPF 111 Query: 180 SSILTLERTLFV 145 + ++ F+ Sbjct: 112 GDVEYVDLDAFL 123
>OXRP_HUMAN (Q9Y4L1) 150 kDa oxygen-regulated protein precursor (Orp150)| (Hypoxia up-regulated 1) Length = 999 Score = 29.6 bits (65), Expect = 6.0 Identities = 23/55 (41%), Positives = 27/55 (49%), Gaps = 1/55 (1%) Frame = +2 Query: 239 KDGPSSGPSTPRGDA-PHGAFGTEENSPGKSTKTNGDESEAKIGLHKILSSKAEA 400 +DG P P+GDA P G TE K NGD+SEA+ S KAEA Sbjct: 631 EDGSQPPPPEPKGDATPEGEKATE--------KENGDKSEAQKP-----SEKAEA 672
>NPAS1_HUMAN (Q99742) Neuronal PAS domain protein 1 (Neuronal PAS1) (Member of| PAS protein 5) (MOP5) Length = 590 Score = 29.6 bits (65), Expect = 6.0 Identities = 20/66 (30%), Positives = 32/66 (48%) Frame = +2 Query: 77 PFDPQHPLQSTIASKITNLATKVTNKVRSRVKMDENGMVREGGSGESQCSDRDNKDGPSS 256 P +P+ P + A+ N A + K R+K+ E G E++ S+ + PSS Sbjct: 436 PTEPEPPTEGKQAAPAENEAPQTQGK---RIKV-------EPGPRETKGSEDSGDEDPSS 485 Query: 257 GPSTPR 274 P+TPR Sbjct: 486 HPATPR 491
>DBP_RAT (P16443) D site-binding protein (Albumin D box-binding protein)| (Albumin D-element-binding protein) (D site albumin promoter-binding protein 1) Length = 325 Score = 29.6 bits (65), Expect = 6.0 Identities = 17/47 (36%), Positives = 24/47 (51%) Frame = -1 Query: 285 GASPLGVLGPLDGPSLLSRSEH*LSPLPPSRTMPFSSILTLERTLFV 145 G SP G GP+ GPSL +PL RT+PF + ++ F+ Sbjct: 84 GGSPRGRSGPVAGPSL-------FAPLLWERTLPFGDVEYVDLDAFL 123
>HORN_MOUSE (Q8VHD8) Hornerin| Length = 2496 Score = 29.6 bits (65), Expect = 6.0 Identities = 42/192 (21%), Positives = 72/192 (37%), Gaps = 12/192 (6%) Frame = +2 Query: 17 SCCDGSCSNSNRKPSLLNRNPFDPQHPLQSTIASKITNLATKVTNKVRSRVKMDENGMVR 196 S C G+ + + S+ + H S+ K T+ + + N R ++ Sbjct: 342 SSCSGTRECGSSESSMKKTHVSGSGH---SSSTGKYTSTSGQNYNSTRQGCGQGKSSGSE 398 Query: 197 EGGSGESQCSDRDNKDGPSSGPSTPRGDAPHGAFGTEENSPGKSTKTNGDESE------- 355 + G+ Q S G SSG ST G+ G+ + S G+ST S+ Sbjct: 399 QYGASSGQSS------GCSSGQSTRYGEQGSGSRNSSTQSRGRSTSRESSTSQQFGSGSG 452 Query: 356 -----AKIGLHKILSSKAEALLNKKGITWPWKGRENDGSDCRNQMTWPSLHGEQENGQNH 520 ++ G + SS+ + G T +G + GS C S +G+ E G H Sbjct: 453 RSSGFSQGGSGQGRSSRGGQQGSFSGQT---EGSQQHGSCCGQS----SGYGQNEYGSGH 505 Query: 521 PKIADTQVAEYN 556 + Q + Y+ Sbjct: 506 SASSGQQGSHYS 517
>HCN2_MOUSE (O88703) Potassium/sodium hyperpolarization-activated cyclic| nucleotide-gated channel 2 (Brain cyclic nucleotide gated channel 2) (BCNG-2) (Hyperpolarization-activated cation channel 1) (HAC-1) Length = 863 Score = 29.6 bits (65), Expect = 6.0 Identities = 29/89 (32%), Positives = 36/89 (40%), Gaps = 7/89 (7%) Frame = +2 Query: 74 NPFDPQHPLQSTIASKITNLATKVTNKVRSRVKMDENGMVREGGSGESQCSDRDNKDGPS 253 NP P HP + L ++ + K NG E G GE QCS +GP+ Sbjct: 43 NPTTPSHPESADEPGPRARLCSRDSACTPGAAKGGANG---ECGRGEPQCS----PEGPA 95 Query: 254 SGPSTP---RGDA--PHGA--FGTEENSP 319 GP RG A P A G+EE P Sbjct: 96 RGPKVSFSCRGAASGPSAAEEAGSEEAGP 124
>UBP5_YEAST (P39944) Ubiquitin carboxyl-terminal hydrolase 5 (EC 3.1.2.15)| (Ubiquitin thioesterase 5) (Ubiquitin-specific-processing protease 5) (Deubiquitinating enzyme 5) Length = 805 Score = 29.6 bits (65), Expect = 6.0 Identities = 21/78 (26%), Positives = 37/78 (47%), Gaps = 3/78 (3%) Frame = +2 Query: 101 QSTIASKITNLATKVTNKVRSRVKMDENGM---VREGGSGESQCSDRDNKDGPSSGPSTP 271 Q+ I +KI + + + +++ + ENG V+ GG+ +S S+ + SS P+ Sbjct: 242 QTRILAKILSQNSVIKPLSGTKILILENGFSNWVKLGGAYQSSVSETAHLTSSSSTPAFG 301 Query: 272 RGDAPHGAFGTEENSPGK 325 P G F + SP K Sbjct: 302 SPQVPTGLFNQKSLSPNK 319
>ZCHC2_MOUSE (Q69ZB8) Zinc finger CCHC domain-containing protein 2 (Fragment)| Length = 1168 Score = 29.3 bits (64), Expect = 7.8 Identities = 18/45 (40%), Positives = 24/45 (53%), Gaps = 1/45 (2%) Frame = -1 Query: 282 ASPLGVLGPLDGPSLLSRSEH*LSPLP-PSRTMPFSSILTLERTL 151 ++P+G+LGP E SPLP PS +P SS L+ TL Sbjct: 761 SAPVGILGPAASGESEKHLELLASPLPLPSTFLPHSSAPALQLTL 805
>NOLC1_HUMAN (Q14978) Nucleolar phosphoprotein p130 (Nucleolar 130 kDa protein)| (140 kDa nucleolar phosphoprotein) (Nopp140) (Nucleolar and coiled-body phosphoprotein 1) Length = 699 Score = 29.3 bits (64), Expect = 7.8 Identities = 23/82 (28%), Positives = 34/82 (41%), Gaps = 15/82 (18%) Frame = +2 Query: 194 REGGSGESQCSDRD--------NKDGPSSGPSTPRGDAPHGAFGT-------EENSPGKS 328 R+ S E SD + NK GP S P P + GT E+ P +S Sbjct: 262 RKSSSSEDSSSDEEEEQKKPMKNKPGPYSYAPPPSAPPPKKSLGTQPPKKAVEKQQPVES 321 Query: 329 TKTNGDESEAKIGLHKILSSKA 394 ++ + DES++ K +KA Sbjct: 322 SEDSSDESDSSSEEEKKPPTKA 343
>HMDH1_YEAST (P12683) 3-hydroxy-3-methylglutaryl-coenzyme A reductase 1 (EC| 1.1.1.34) (HMG-CoA reductase 1) Length = 1054 Score = 29.3 bits (64), Expect = 7.8 Identities = 19/46 (41%), Positives = 25/46 (54%), Gaps = 4/46 (8%) Frame = -1 Query: 366 PILASDSSPFVLVDFPGEFSSVPKAPCGASPL--GVLGPL--DGPS 241 P+LASD P+ D+ F + + G PL GV+GPL DG S Sbjct: 660 PVLASDRLPYKNYDYDRVFGACCENVIGYMPLPVGVIGPLVIDGTS 705
>VIAAT_RAT (O35458) Vesicular inhibitory amino acid transporter (GABA and| glycine transporter) (Vesicular GABA transporter) (rGVAT) (Solute carrier family 32 member 1) Length = 525 Score = 29.3 bits (64), Expect = 7.8 Identities = 16/51 (31%), Positives = 27/51 (52%), Gaps = 5/51 (9%) Frame = +2 Query: 98 LQSTIASKITNLATKVTNKVRSRV-----KMDENGMVREGGSGESQCSDRD 235 + + + SK+TN+AT V+NK +++V +M E G + C D D Sbjct: 1 MATLLRSKLTNVATSVSNKSQAKVSGMFARMGFQAATDEEAVGFAHCDDLD 51
>VIAAT_MOUSE (O35633) Vesicular inhibitory amino acid transporter (GABA and| glycine transporter) (Vesicular GABA transporter) (mVIAAT) (mVGAT) (Solute carrier family 32 member 1) Length = 525 Score = 29.3 bits (64), Expect = 7.8 Identities = 16/51 (31%), Positives = 27/51 (52%), Gaps = 5/51 (9%) Frame = +2 Query: 98 LQSTIASKITNLATKVTNKVRSRV-----KMDENGMVREGGSGESQCSDRD 235 + + + SK+TN+AT V+NK +++V +M E G + C D D Sbjct: 1 MATLLRSKLTNVATSVSNKSQAKVSGMFARMGFQAATDEEAVGFAHCDDLD 51
>TBX18_MOUSE (Q9EPZ6) T-box transcription factor TBX18 (T-box protein 18)| Length = 613 Score = 29.3 bits (64), Expect = 7.8 Identities = 24/76 (31%), Positives = 34/76 (44%), Gaps = 22/76 (28%) Frame = +2 Query: 173 MDENGMVREGGSGESQCSDRDNK-------DGPSSGPSTPRGDA-----PHGAFGTEEN- 313 +++ G R GG+GE CS+ D + G +SGP+ DA GA G+ E+ Sbjct: 50 VEDAGCSRSGGAGEHGCSEADEEAAAPPPAAGAASGPARSCADAERSCGSRGAAGSCEDG 109 Query: 314 ---------SPGKSTK 334 SPG S K Sbjct: 110 FLQGASPLASPGGSPK 125
>CPB3_CAERE (Q6E3D4) Cytoplasmic polyadenylation element-binding protein 3| Length = 766 Score = 29.3 bits (64), Expect = 7.8 Identities = 25/82 (30%), Positives = 39/82 (47%), Gaps = 5/82 (6%) Frame = +2 Query: 269 PRGDAPHGAFGTEENSPGKS-----TKTNGDESEAKIGLHKILSSKAEALLNKKGITWPW 433 PR P G+ T +SP K+ +K+ G + ++ + +S E L KK I+ P Sbjct: 223 PRQQGPRGSLETPTDSPAKTETSSISKSYGSDYQSSRDRY---TSINEDSLTKKRISTPN 279 Query: 434 KGRENDGSDCRNQMTWPSLHGE 499 +G+ G R+ TW HGE Sbjct: 280 RGQ---GLSNRDNATW---HGE 295
>CEAC_ECOLI (P00645) Cloacin (EC 3.1.-.-) (Ribonuclease)| Length = 561 Score = 29.3 bits (64), Expect = 7.8 Identities = 21/78 (26%), Positives = 30/78 (38%), Gaps = 16/78 (20%) Frame = +2 Query: 182 NGMVREGGSGESQCSDRDNKDGPSSG-------------PSTPRGDAPH---GAFGTEEN 313 +G+ GG + K GPSSG TP GD + G FG + Sbjct: 12 SGLGHNGGQASGNVNGTSGKGGPSSGGGTDPNSGPGWGTTHTPNGDIHNYNPGEFGNGGS 71 Query: 314 SPGKSTKTNGDESEAKIG 367 PG + +G+ S + G Sbjct: 72 KPGGNGGNSGNHSGSSGG 89
>BFR2_ASHGO (Q75EZ2) Protein BFR2| Length = 528 Score = 29.3 bits (64), Expect = 7.8 Identities = 15/51 (29%), Positives = 25/51 (49%) Frame = +2 Query: 206 SGESQCSDRDNKDGPSSGPSTPRGDAPHGAFGTEENSPGKSTKTNGDESEA 358 SGE S+ D + S G S DAP +E+ S +S +++ D ++ Sbjct: 87 SGEEDGSESDRRGSDSDGGSDSDSDAPEATLSSEQ-SADESARSDSDSGDS 136
>SNTB2_HUMAN (Q13425) Beta-2-syntrophin (59 kDa dystrophin-associated protein| A1, basic component 2) (Syntrophin 3) (SNT3) (Syntrophin-like) (SNTL) Length = 540 Score = 29.3 bits (64), Expect = 7.8 Identities = 14/34 (41%), Positives = 18/34 (52%) Frame = +2 Query: 182 NGMVREGGSGESQCSDRDNKDGPSSGPSTPRGDA 283 NG+ GG+G+S GP S P+ PRG A Sbjct: 71 NGLPNGGGAGDSLPGSPSRGLGPPSPPAPPRGPA 104
>VGLB_HSVA1 (Q04463) Glycoprotein B precursor| Length = 933 Score = 29.3 bits (64), Expect = 7.8 Identities = 17/53 (32%), Positives = 21/53 (39%), Gaps = 4/53 (7%) Frame = +2 Query: 191 VREGGSGESQCSDRDNKDGPSSGPSTPRGD----APHGAFGTEENSPGKSTKT 337 V +G E D P SGP +P D P G G SPG T++ Sbjct: 59 VEDGDYDEYDDEGHTPTDVPGSGPESPGPDRPPRGPGGGSGRRRGSPGNGTRS 111 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 76,881,668 Number of Sequences: 219361 Number of extensions: 1589769 Number of successful extensions: 5971 Number of sequences better than 10.0: 38 Number of HSP's better than 10.0 without gapping: 5538 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5962 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 4528412720 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
