>RS27_HORVU (Q96564) 40S ribosomal protein S27 (Manganese efficiency-related|
           protein 1)
          Length = 86

 Score = 77.0 bits (188), Expect = 1e-14
 Identities = 37/47 (78%), Positives = 37/47 (78%)
 Frame = +3

Query: 75  MVLQNDIDLLNPPAXXXXXXXXXXRLVQSPNSFFMDVKCQGCFNITT 215
           MVLQNDIDLLNPPA          RLVQSPNSFFMDVKCQGCFNITT
Sbjct: 1   MVLQNDIDLLNPPAELEKLKHKKKRLVQSPNSFFMDVKCQGCFNITT 47

>RS27B_ARATH (Q9M2F1) 40S ribosomal protein S27-2|
          Length = 86

 Score = 77.0 bits (188), Expect = 1e-14
 Identities = 37/47 (78%), Positives = 37/47 (78%)
 Frame = +3

Query: 75  MVLQNDIDLLNPPAXXXXXXXXXXRLVQSPNSFFMDVKCQGCFNITT 215
           MVLQNDIDLLNPPA          RLVQSPNSFFMDVKCQGCFNITT
Sbjct: 1   MVLQNDIDLLNPPAELEKRKHKLKRLVQSPNSFFMDVKCQGCFNITT 47

>RS27A_ARATH (O64650) 40S ribosomal protein S27-1|
          Length = 84

 Score = 77.0 bits (188), Expect = 1e-14
 Identities = 37/47 (78%), Positives = 37/47 (78%)
 Frame = +3

Query: 75  MVLQNDIDLLNPPAXXXXXXXXXXRLVQSPNSFFMDVKCQGCFNITT 215
           MVLQNDIDLLNPPA          RLVQSPNSFFMDVKCQGCFNITT
Sbjct: 1   MVLQNDIDLLNPPAELEKRKHKLKRLVQSPNSFFMDVKCQGCFNITT 47

>RS27_CHLRE (P47903) 40S ribosomal protein S27|
          Length = 86

 Score = 73.6 bits (179), Expect = 1e-13
 Identities = 35/47 (74%), Positives = 36/47 (76%)
 Frame = +3

Query: 75  MVLQNDIDLLNPPAXXXXXXXXXXRLVQSPNSFFMDVKCQGCFNITT 215
           MVL +DIDLLNPPA          RLVQSPNSFFMDVKCQGCFNITT
Sbjct: 1   MVLSSDIDLLNPPAELEKTKHKRKRLVQSPNSFFMDVKCQGCFNITT 47

>RS27D_ARATH (Q8L953) 40S ribosomal protein S27-4|
          Length = 84

 Score = 73.2 bits (178), Expect = 2e-13
 Identities = 35/47 (74%), Positives = 36/47 (76%)
 Frame = +3

Query: 75  MVLQNDIDLLNPPAXXXXXXXXXXRLVQSPNSFFMDVKCQGCFNITT 215
           MVLQNDIDLL+PP           RLVQSPNSFFMDVKCQGCFNITT
Sbjct: 1   MVLQNDIDLLHPPPELEKRKHKLKRLVQSPNSFFMDVKCQGCFNITT 47

>RS27_SCHPO (O74330) 40S ribosomal protein S27|
          Length = 83

 Score = 52.4 bits (124), Expect = 3e-07
 Identities = 24/41 (58%), Positives = 26/41 (63%)
 Frame = +3

Query: 93  IDLLNPPAXXXXXXXXXXRLVQSPNSFFMDVKCQGCFNITT 215
           +DLLNP            +LVQ P SFFMDVKC GCFNITT
Sbjct: 5   VDLLNPSHESEMRKHKLKQLVQGPRSFFMDVKCPGCFNITT 45

>RS27_XENLA (P47904) 40S ribosomal protein S27|
          Length = 83

 Score = 50.1 bits (118), Expect = 2e-06
 Identities = 23/40 (57%), Positives = 26/40 (65%)
 Frame = +3

Query: 96  DLLNPPAXXXXXXXXXXRLVQSPNSFFMDVKCQGCFNITT 215
           DLL+P            RLVQSPNS+FMDVKC GC+ ITT
Sbjct: 5   DLLHPTPEEEKRKHKKKRLVQSPNSYFMDVKCPGCYKITT 44

>RS27_RAT (Q71TY3) 40S ribosomal protein S27|
          Length = 83

 Score = 50.1 bits (118), Expect = 2e-06
 Identities = 23/40 (57%), Positives = 26/40 (65%)
 Frame = +3

Query: 96  DLLNPPAXXXXXXXXXXRLVQSPNSFFMDVKCQGCFNITT 215
           DLL+P            RLVQSPNS+FMDVKC GC+ ITT
Sbjct: 5   DLLHPSPEEEKRKHKKKRLVQSPNSYFMDVKCPGCYKITT 44

>RS27_MOUSE (Q6ZWU9) 40S ribosomal protein S27|
          Length = 83

 Score = 50.1 bits (118), Expect = 2e-06
 Identities = 23/40 (57%), Positives = 26/40 (65%)
 Frame = +3

Query: 96  DLLNPPAXXXXXXXXXXRLVQSPNSFFMDVKCQGCFNITT 215
           DLL+P            RLVQSPNS+FMDVKC GC+ ITT
Sbjct: 5   DLLHPSPEEEKRKHKKKRLVQSPNSYFMDVKCPGCYKITT 44

>RS27_HUMAN (P42677) 40S ribosomal protein S27 (Metallopan-stimulin 1) (MPS-1)|
          Length = 83

 Score = 50.1 bits (118), Expect = 2e-06
 Identities = 23/40 (57%), Positives = 26/40 (65%)
 Frame = +3

Query: 96  DLLNPPAXXXXXXXXXXRLVQSPNSFFMDVKCQGCFNITT 215
           DLL+P            RLVQSPNS+FMDVKC GC+ ITT
Sbjct: 5   DLLHPSPEEEKRKHKKKRLVQSPNSYFMDVKCPGCYKITT 44

>RS27L_RAT (P24051) 40S ribosomal protein S27-like protein|
          Length = 83

 Score = 50.1 bits (118), Expect = 2e-06
 Identities = 23/40 (57%), Positives = 26/40 (65%)
 Frame = +3

Query: 96  DLLNPPAXXXXXXXXXXRLVQSPNSFFMDVKCQGCFNITT 215
           DLL+P            RLVQSPNS+FMDVKC GC+ ITT
Sbjct: 5   DLLHPSLEEEKKKHKKKRLVQSPNSYFMDVKCPGCYKITT 44

>RS27L_MOUSE (Q6ZWY3) 40S ribosomal protein S27-like protein|
          Length = 83

 Score = 50.1 bits (118), Expect = 2e-06
 Identities = 23/40 (57%), Positives = 26/40 (65%)
 Frame = +3

Query: 96  DLLNPPAXXXXXXXXXXRLVQSPNSFFMDVKCQGCFNITT 215
           DLL+P            RLVQSPNS+FMDVKC GC+ ITT
Sbjct: 5   DLLHPSLEEEKKKHKKKRLVQSPNSYFMDVKCPGCYKITT 44

>RS27L_HUMAN (Q71UM5) 40S ribosomal protein S27-like protein|
          Length = 83

 Score = 50.1 bits (118), Expect = 2e-06
 Identities = 23/40 (57%), Positives = 26/40 (65%)
 Frame = +3

Query: 96  DLLNPPAXXXXXXXXXXRLVQSPNSFFMDVKCQGCFNITT 215
           DLL+P            RLVQSPNS+FMDVKC GC+ ITT
Sbjct: 5   DLLHPSLEEEKKKHKKKRLVQSPNSYFMDVKCPGCYKITT 44

>RS27L_BOVIN (Q3T0B7) 40S ribosomal protein S27-like protein|
          Length = 83

 Score = 50.1 bits (118), Expect = 2e-06
 Identities = 23/40 (57%), Positives = 26/40 (65%)
 Frame = +3

Query: 96  DLLNPPAXXXXXXXXXXRLVQSPNSFFMDVKCQGCFNITT 215
           DLL+P            RLVQSPNS+FMDVKC GC+ ITT
Sbjct: 5   DLLHPSLDEEKKKHKKKRLVQSPNSYFMDVKCPGCYKITT 44

>RS27_HOMAM (P55833) 40S ribosomal protein S27|
          Length = 83

 Score = 47.8 bits (112), Expect = 8e-06
 Identities = 22/40 (55%), Positives = 25/40 (62%)
 Frame = +3

Query: 96  DLLNPPAXXXXXXXXXXRLVQSPNSFFMDVKCQGCFNITT 215
           DLL+P            RLVQ PNS+FMDVKC GCF I+T
Sbjct: 5   DLLHPSPSEEKRKCKLKRLVQHPNSYFMDVKCPGCFKIST 44

>RS27_PONPY (Q5RBK1) 40S ribosomal protein S27|
          Length = 83

 Score = 47.4 bits (111), Expect = 1e-05
 Identities = 22/40 (55%), Positives = 25/40 (62%)
 Frame = +3

Query: 96  DLLNPPAXXXXXXXXXXRLVQSPNSFFMDVKCQGCFNITT 215
           D L+P            RLVQSPNS+FMDVKC GC+ ITT
Sbjct: 5   DPLHPSPEEEKRKHKKKRLVQSPNSYFMDVKCPGCYKITT 44

>RS27B_YEAST (P38711) 40S ribosomal protein S27-B (YS20) (RP61)|
          Length = 82

 Score = 47.0 bits (110), Expect = 1e-05
 Identities = 21/40 (52%), Positives = 24/40 (60%)
 Frame = +3

Query: 96  DLLNPPAXXXXXXXXXXRLVQSPNSFFMDVKCQGCFNITT 215
           DLL+P A           LVQ P S+F+DVKC GC NITT
Sbjct: 6   DLLHPTAASEARKHKLKTLVQGPRSYFLDVKCPGCLNITT 45

>RS27A_YEAST (P35997) 40S ribosomal protein S27-A (YS20) (RP61)|
          Length = 82

 Score = 47.0 bits (110), Expect = 1e-05
 Identities = 21/40 (52%), Positives = 24/40 (60%)
 Frame = +3

Query: 96  DLLNPPAXXXXXXXXXXRLVQSPNSFFMDVKCQGCFNITT 215
           DLL+P A           LVQ P S+F+DVKC GC NITT
Sbjct: 6   DLLHPTAASEARKHKLKTLVQGPRSYFLDVKCPGCLNITT 45

>RS27_ENTHI (P38654) 40S ribosomal protein S27 (EHZC3 protein)|
          Length = 84

 Score = 42.7 bits (99), Expect = 3e-04
 Identities = 18/42 (42%), Positives = 25/42 (59%)
 Frame = +3

Query: 90  DIDLLNPPAXXXXXXXXXXRLVQSPNSFFMDVKCQGCFNITT 215
           ++DLLNP A          RLV +PNS+F+++KC  C   TT
Sbjct: 5   EVDLLNPTAASEAKAHKMKRLVPTPNSYFLEIKCPKCGATTT 46

>DEC1_DROER (Q23933) Defective chorion-1 protein precursor (Fragments)|
          Length = 557

 Score = 28.5 bits (62), Expect = 5.0
 Identities = 14/34 (41%), Positives = 17/34 (50%)
 Frame = +3

Query: 9   SPAATPSLHPLPRQEPPXPLVKMVLQNDIDLLNP 110
           +PAA P   P+P    P  L +  LQN    LNP
Sbjct: 197 APAADPPAAPVPDAAQPAILGQAALQNAFTFLNP 230


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.312    0.122    0.365 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,320,202
Number of Sequences: 219361
Number of extensions: 214867
Number of successful extensions: 737
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 706
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 736
length of database: 80,573,946
effective HSP length: 47
effective length of database: 70,263,979
effective search space used: 1686335496
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)