ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal8p23
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_468711.1| Oryza sativa (japonica cultivar-group), mRNA 78 8e-12
2gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 78 8e-12
3gb|AC137992.2| Oryza sativa chromosome 3 BAC OSJNBb0056B16 genom... 78 8e-12
4dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 78 8e-12
5dbj|AK121654.1| Oryza sativa (japonica cultivar-group) cDNA clon... 78 8e-12
6gb|BT017768.1| Zea mays clone EL01N0502D07.c mRNA sequence 70 2e-09
7gb|BT017840.1| Zea mays clone EL01N0509H03.c mRNA sequence 66 3e-08
8gb|BT016263.1| Zea mays clone Contig96 mRNA sequence 62 5e-07
9gb|AY525609.1| Zea mays unknown mRNA, partial sequence 62 5e-07
10gb|AY103828.1| Zea mays PCO131037 mRNA sequence 62 5e-07
11ref|XM_601090.2| PREDICTED: Bos taurus similar to 1-aminocyclopr... 42 0.43
12ref|XM_752338.1| Ustilago maydis 521 hypothetical protein (UM012... 42 0.43
13emb|BX640411.1| Bordetella pertussis strain Tohama I, complete g... 40 1.7
14gb|AC010677.4| Homo sapiens chromosome 7 clone CTD-2304L4, compl... 40 1.7
15gb|AE017340.1| Idiomarina loihiensis L2TR, complete genome 40 1.7
16gb|DQ026027.1| Leishmania mexicana putative mitogen-activated pr... 40 1.7
17ref|XM_481741.1| Oryza sativa (japonica cultivar-group), mRNA 38 6.7
18ref|XM_481739.1| Oryza sativa (japonica cultivar-group), mRNA 38 6.7
19ref|XM_874594.1| PREDICTED: Bos taurus similar to Polycomb prote... 38 6.7
20ref|XM_864892.1| PREDICTED: Bos taurus similar to Polycomb prote... 38 6.7
21ref|XM_874434.1| PREDICTED: Bos taurus similar to Polycomb prote... 38 6.7
22ref|XM_874351.1| PREDICTED: Bos taurus similar to Polycomb prote... 38 6.7
23ref|XM_874270.1| PREDICTED: Bos taurus similar to Polycomb prote... 38 6.7
24ref|XM_613714.2| PREDICTED: Bos taurus similar to Polycomb prote... 38 6.7
25ref|XM_874094.1| PREDICTED: Bos taurus similar to Polycomb prote... 38 6.7
26ref|XM_873718.1| PREDICTED: Bos taurus similar to Polycomb prote... 38 6.7
27ref|XM_873623.1| PREDICTED: Bos taurus similar to Polycomb prote... 38 6.7
28ref|XM_873527.1| PREDICTED: Bos taurus similar to Polycomb prote... 38 6.7
29ref|XM_873424.1| PREDICTED: Bos taurus similar to Polycomb prote... 38 6.7
30gb|CP000352.1| Ralstonia metallidurans CH34, complete genome 38 6.7
31emb|AL441943.6| Human DNA sequence from clone RP11-69C17 on chro... 38 6.7
32emb|AL356242.17| Human DNA sequence from clone RP11-12F17 on chr... 38 6.7
33gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome 38 6.7
34dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 38 6.7
35emb|AL928622.9| Zebrafish DNA sequence from clone DKEY-31O13, co... 38 6.7
36dbj|AP004706.3| Oryza sativa (japonica cultivar-group) genomic D... 38 6.7
37dbj|AP004621.3| Oryza sativa (japonica cultivar-group) genomic D... 38 6.7
38ref|XM_315474.2| Anopheles gambiae str. PEST ENSANGP00000021784 ... 38 6.7
39dbj|AK099602.1| Oryza sativa (japonica cultivar-group) cDNA clon... 38 6.7
40dbj|AK067509.1| Oryza sativa (japonica cultivar-group) cDNA clon... 38 6.7
41gb|AE016877.1| Bacillus cereus ATCC 14579, complete genome 38 6.7
42dbj|AP006538.1| Lotus japonicus genomic DNA, chromosome 2, clone... 38 6.7 
>ref|XM_468711.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 755

 Score = 77.8 bits (39), Expect = 8e-12
 Identities = 51/55 (92%)
 Strand = Plus / Plus

                                                                  
Query: 1   atgagtcgtggcgggagtgctggtggtggtcaaagttctctgggttacctgtttg 55
           ||||||||||| |||||||| |||||||| |||||||||||||||||||| ||||
Sbjct: 130 atgagtcgtggtgggagtgccggtggtggccaaagttctctgggttacctttttg 184
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 77.8 bits (39), Expect = 8e-12
 Identities = 51/55 (92%)
 Strand = Plus / Minus

                                                                       
Query: 1        atgagtcgtggcgggagtgctggtggtggtcaaagttctctgggttacctgtttg 55
                ||||||||||| |||||||| |||||||| |||||||||||||||||||| ||||
Sbjct: 17160864 atgagtcgtggtgggagtgccggtggtggccaaagttctctgggttacctttttg 17160810
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>gb|AC137992.2| Oryza sativa chromosome 3 BAC OSJNBb0056B16 genomic sequence, complete
             sequence
          Length = 153247

 Score = 77.8 bits (39), Expect = 8e-12
 Identities = 51/55 (92%)
 Strand = Plus / Minus

                                                                    
Query: 1     atgagtcgtggcgggagtgctggtggtggtcaaagttctctgggttacctgtttg 55
             ||||||||||| |||||||| |||||||| |||||||||||||||||||| ||||
Sbjct: 52257 atgagtcgtggtgggagtgccggtggtggccaaagttctctgggttacctttttg 52203
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 77.8 bits (39), Expect = 8e-12
 Identities = 51/55 (92%)
 Strand = Plus / Minus

                                                                       
Query: 1        atgagtcgtggcgggagtgctggtggtggtcaaagttctctgggttacctgtttg 55
                ||||||||||| |||||||| |||||||| |||||||||||||||||||| ||||
Sbjct: 17154433 atgagtcgtggtgggagtgccggtggtggccaaagttctctgggttacctttttg 17154379
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>dbj|AK121654.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033061K11, full
           insert sequence
          Length = 732

 Score = 77.8 bits (39), Expect = 8e-12
 Identities = 51/55 (92%)
 Strand = Plus / Plus

                                                                  
Query: 1   atgagtcgtggcgggagtgctggtggtggtcaaagttctctgggttacctgtttg 55
           ||||||||||| |||||||| |||||||| |||||||||||||||||||| ||||
Sbjct: 100 atgagtcgtggtgggagtgccggtggtggccaaagttctctgggttacctttttg 154
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>gb|BT017768.1| Zea mays clone EL01N0502D07.c mRNA sequence
          Length = 736

 Score = 69.9 bits (35), Expect = 2e-09
 Identities = 50/55 (90%)
 Strand = Plus / Plus

                                                                  
Query: 1   atgagtcgtggcgggagtgctggtggtggtcaaagttctctgggttacctgtttg 55
           ||||| |||||||| || || ||||||||||||||||||||||||||||| ||||
Sbjct: 114 atgagccgtggcggtagcgcgggtggtggtcaaagttctctgggttacctctttg 168
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>gb|BT017840.1| Zea mays clone EL01N0509H03.c mRNA sequence
          Length = 649

 Score = 65.9 bits (33), Expect = 3e-08
 Identities = 45/49 (91%)
 Strand = Plus / Plus

                                                            
Query: 7   cgtggcgggagtgctggtggtggtcaaagttctctgggttacctgtttg 55
           |||||||| || || ||||||||||||||||||||||||||||| ||||
Sbjct: 83  cgtggcggtagcgcgggtggtggtcaaagttctctgggttacctctttg 131
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>gb|BT016263.1| Zea mays clone Contig96 mRNA sequence
          Length = 738

 Score = 61.9 bits (31), Expect = 5e-07
 Identities = 43/47 (91%)
 Strand = Plus / Plus

                                                          
Query: 1   atgagtcgtggcgggagtgctggtggtggtcaaagttctctgggtta 47
           ||||| ||||| || ||||| ||||||||||||||||||||||||||
Sbjct: 97  atgagccgtggtggtagtgccggtggtggtcaaagttctctgggtta 143
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>gb|AY525609.1| Zea mays unknown mRNA, partial sequence
          Length = 625

 Score = 61.9 bits (31), Expect = 5e-07
 Identities = 43/47 (91%)
 Strand = Plus / Plus

                                                          
Query: 1   atgagtcgtggcgggagtgctggtggtggtcaaagttctctgggtta 47
           ||||| ||||| || ||||| ||||||||||||||||||||||||||
Sbjct: 94  atgagccgtggtggtagtgccggtggtggtcaaagttctctgggtta 140
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>gb|AY103828.1| Zea mays PCO131037 mRNA sequence
          Length = 858

 Score = 61.9 bits (31), Expect = 5e-07
 Identities = 43/47 (91%)
 Strand = Plus / Plus

                                                          
Query: 1   atgagtcgtggcgggagtgctggtggtggtcaaagttctctgggtta 47
           ||||| ||||| || ||||| ||||||||||||||||||||||||||
Sbjct: 229 atgagccgtggtggtagtgccggtggtggtcaaagttctctgggtta 275
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>ref|XM_601090.2| PREDICTED: Bos taurus similar to 1-aminocyclopropane-1-carboxylate
            synthase (LOC522802), partial mRNA
          Length = 1955

 Score = 42.1 bits (21), Expect = 0.43
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 98   aggccccacctgctgagaaac 118
            |||||||||||||||||||||
Sbjct: 1797 aggccccacctgctgagaaac 1817
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>ref|XM_752338.1| Ustilago maydis 521 hypothetical protein (UM01284.1) partial mRNA
          Length = 2592

 Score = 42.1 bits (21), Expect = 0.43
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 104 cacctgctgagaaaccagcac 124
           |||||||||||||||||||||
Sbjct: 193 cacctgctgagaaaccagcac 173
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>emb|BX640411.1| Bordetella pertussis strain Tohama I, complete genome; segment 1/12
          Length = 346359

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 117    accagcacaagcacctgctg 136
              ||||||||||||||||||||
Sbjct: 232812 accagcacaagcacctgctg 232831
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>gb|AC010677.4| Homo sapiens chromosome 7 clone CTD-2304L4, complete sequence
          Length = 112659

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 26     gtggtcaaagttctctgggt 45
              ||||||||||||||||||||
Sbjct: 110000 gtggtcaaagttctctgggt 110019
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>gb|AE017340.1| Idiomarina loihiensis L2TR, complete genome
          Length = 2839318

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 106     cctgctgagaaaccagcacaagca 129
               ||||||||||||||||| ||||||
Sbjct: 2360225 cctgctgagaaaccagctcaagca 2360248
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>gb|DQ026027.1| Leishmania mexicana putative mitogen-activated protein kinase 11
           gene, complete cds
          Length = 1227

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 26  gtggtcaaagttctctgggt 45
           ||||||||||||||||||||
Sbjct: 297 gtggtcaaagttctctgggt 278
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>ref|XM_481741.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2891

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                   
Query: 107  ctgctgagaaaccagcacaagca 129
            ||||||||||||||| |||||||
Sbjct: 1476 ctgctgagaaaccagtacaagca 1498
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>ref|XM_481739.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2373

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                  
Query: 107 ctgctgagaaaccagcacaagca 129
           ||||||||||||||| |||||||
Sbjct: 958 ctgctgagaaaccagtacaagca 980
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>ref|XM_874594.1| PREDICTED: Bos taurus similar to Polycomb protein SCMH1 (Sex comb on
            midleg homolog 1), transcript variant 18 (LOC540926),
            mRNA
          Length = 3222

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 24/26 (92%)
 Strand = Plus / Minus

                                      
Query: 65   agcctgcaaagcctgctgcancacca 90
            |||||||| ||||||||||| |||||
Sbjct: 1472 agcctgcacagcctgctgcaacacca 1447
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>ref|XM_864892.1| PREDICTED: Bos taurus similar to Polycomb protein SCMH1 (Sex comb on
            midleg homolog 1), transcript variant 2 (LOC540926), mRNA
          Length = 3314

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 24/26 (92%)
 Strand = Plus / Minus

                                      
Query: 65   agcctgcaaagcctgctgcancacca 90
            |||||||| ||||||||||| |||||
Sbjct: 1495 agcctgcacagcctgctgcaacacca 1470
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>ref|XM_874434.1| PREDICTED: Bos taurus similar to Polycomb protein SCMH1 (Sex comb on
            midleg homolog 1), transcript variant 17 (LOC540926),
            mRNA
          Length = 3323

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 24/26 (92%)
 Strand = Plus / Minus

                                      
Query: 65   agcctgcaaagcctgctgcancacca 90
            |||||||| ||||||||||| |||||
Sbjct: 1495 agcctgcacagcctgctgcaacacca 1470
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>ref|XM_874351.1| PREDICTED: Bos taurus similar to Polycomb protein SCMH1 (Sex comb on
            midleg homolog 1), transcript variant 16 (LOC540926),
            mRNA
          Length = 3377

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 24/26 (92%)
 Strand = Plus / Minus

                                      
Query: 65   agcctgcaaagcctgctgcancacca 90
            |||||||| ||||||||||| |||||
Sbjct: 1495 agcctgcacagcctgctgcaacacca 1470
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>ref|XM_874270.1| PREDICTED: Bos taurus similar to Polycomb protein SCMH1 (Sex comb on
            midleg homolog 1), transcript variant 15 (LOC540926),
            mRNA
          Length = 2932

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 24/26 (92%)
 Strand = Plus / Minus

                                      
Query: 65   agcctgcaaagcctgctgcancacca 90
            |||||||| ||||||||||| |||||
Sbjct: 1182 agcctgcacagcctgctgcaacacca 1157
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>ref|XM_613714.2| PREDICTED: Bos taurus similar to Polycomb protein SCMH1 (Sex comb on
            midleg homolog 1), transcript variant 1 (LOC540926), mRNA
          Length = 2890

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 24/26 (92%)
 Strand = Plus / Minus

                                      
Query: 65   agcctgcaaagcctgctgcancacca 90
            |||||||| ||||||||||| |||||
Sbjct: 1140 agcctgcacagcctgctgcaacacca 1115
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>ref|XM_874094.1| PREDICTED: Bos taurus similar to Polycomb protein SCMH1 (Sex comb on
            midleg homolog 1), transcript variant 14 (LOC540926),
            mRNA
          Length = 3053

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 24/26 (92%)
 Strand = Plus / Minus

                                      
Query: 65   agcctgcaaagcctgctgcancacca 90
            |||||||| ||||||||||| |||||
Sbjct: 1495 agcctgcacagcctgctgcaacacca 1470
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>ref|XM_873718.1| PREDICTED: Bos taurus similar to Polycomb protein SCMH1 (Sex comb on
            midleg homolog 1), transcript variant 10 (LOC540926),
            mRNA
          Length = 1337

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 24/26 (92%)
 Strand = Plus / Minus

                                      
Query: 65   agcctgcaaagcctgctgcancacca 90
            |||||||| ||||||||||| |||||
Sbjct: 1239 agcctgcacagcctgctgcaacacca 1214
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>ref|XM_873623.1| PREDICTED: Bos taurus similar to Polycomb protein SCMH1 (Sex comb on
            midleg homolog 1), transcript variant 9 (LOC540926), mRNA
          Length = 3245

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 24/26 (92%)
 Strand = Plus / Minus

                                      
Query: 65   agcctgcaaagcctgctgcancacca 90
            |||||||| ||||||||||| |||||
Sbjct: 1495 agcctgcacagcctgctgcaacacca 1470
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>ref|XM_873527.1| PREDICTED: Bos taurus similar to Polycomb protein SCMH1 (Sex comb on
            midleg homolog 1), transcript variant 8 (LOC540926), mRNA
          Length = 1360

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 24/26 (92%)
 Strand = Plus / Minus

                                      
Query: 65   agcctgcaaagcctgctgcancacca 90
            |||||||| ||||||||||| |||||
Sbjct: 1262 agcctgcacagcctgctgcaacacca 1237
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>ref|XM_873424.1| PREDICTED: Bos taurus similar to Polycomb protein SCMH1 (Sex comb on
            midleg homolog 1), transcript variant 7 (LOC540926), mRNA
          Length = 3094

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 24/26 (92%)
 Strand = Plus / Minus

                                      
Query: 65   agcctgcaaagcctgctgcancacca 90
            |||||||| ||||||||||| |||||
Sbjct: 1344 agcctgcacagcctgctgcaacacca 1319
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>gb|CP000352.1| Ralstonia metallidurans CH34, complete genome
          Length = 3928089

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 65      agcctgcaaagcctgctgc 83
               |||||||||||||||||||
Sbjct: 1079302 agcctgcaaagcctgctgc 1079284
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>emb|AL441943.6| Human DNA sequence from clone RP11-69C17 on chromosome 10 Contains four
              novel genes (FLJ40155) (FLJ31539), complete sequence
          Length = 203234

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 118    ccagcacaagcacctgctg 136
              |||||||||||||||||||
Sbjct: 118044 ccagcacaagcacctgctg 118026
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>emb|AL356242.17| Human DNA sequence from clone RP11-12F17 on chromosome 6 Contains part
             of the EYA4 gene for eyes absent homolog 4 (Drosophila)
             (Deafness, autosomal nonsyndromic sensorineural, 10
             (DFNA10)), complete sequence
          Length = 65933

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 8     gtggcgggagtgctggtggtggt 30
             |||||||| ||||||||||||||
Sbjct: 47476 gtggcgggggtgctggtggtggt 47454
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>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome
          Length = 7074893

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 66      gcctgcaaagcctgctgca 84
               |||||||||||||||||||
Sbjct: 3612040 gcctgcaaagcctgctgca 3612058
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                       
Query: 107      ctgctgagaaaccagcacaagca 129
                ||||||||||||||| |||||||
Sbjct: 15121832 ctgctgagaaaccagtacaagca 15121854
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>emb|AL928622.9| Zebrafish DNA sequence from clone DKEY-31O13, complete sequence
          Length = 230557

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 26/27 (96%), Gaps = 1/27 (3%)
 Strand = Plus / Plus

                                         
Query: 103    ccacctgctgagaaaccagcacaagca 129
              |||||||||||||| ||||||||||||
Sbjct: 119317 ccacctgctgagaa-ccagcacaagca 119342
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>dbj|AP004706.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0683E12
          Length = 165766

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 107    ctgctgagaaaccagcacaagca 129
              ||||||||||||||| |||||||
Sbjct: 112084 ctgctgagaaaccagtacaagca 112106
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>dbj|AP004621.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0689D06
          Length = 146551

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 107    ctgctgagaaaccagcacaagca 129
              ||||||||||||||| |||||||
Sbjct: 120746 ctgctgagaaaccagtacaagca 120768
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>ref|XM_315474.2| Anopheles gambiae str. PEST ENSANGP00000021784
           (ENSANGG00000019295), partial mRNA
          Length = 2064

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 64  gagcctgcaaagcctgctg 82
           |||||||||||||||||||
Sbjct: 949 gagcctgcaaagcctgctg 967
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>dbj|AK099602.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013047F14, full
            insert sequence
          Length = 2891

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                   
Query: 107  ctgctgagaaaccagcacaagca 129
            ||||||||||||||| |||||||
Sbjct: 1476 ctgctgagaaaccagtacaagca 1498
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>dbj|AK067509.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013108C03, full
           insert sequence
          Length = 2373

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                  
Query: 107 ctgctgagaaaccagcacaagca 129
           ||||||||||||||| |||||||
Sbjct: 958 ctgctgagaaaccagtacaagca 980
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>gb|AE016877.1| Bacillus cereus ATCC 14579, complete genome
          Length = 5411809

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 116     aaccagcacaagcacctgc 134
               |||||||||||||||||||
Sbjct: 5095540 aaccagcacaagcacctgc 5095522
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>dbj|AP006538.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT18J10, TM0323a,
             complete sequence
          Length = 95559

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 7     cgtggcgggagtgctggtggtgg 29
             |||||||| ||||||||||||||
Sbjct: 88659 cgtggcggtagtgctggtggtgg 88637


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 989,656
Number of Sequences: 3902068
Number of extensions: 989656
Number of successful extensions: 77844
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 77613
Number of HSP's gapped (non-prelim): 231
length of query: 140
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 119
effective length of database: 17,151,101,840
effective search space: 2040981118960
effective search space used: 2040981118960
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
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