ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal9e21 |
|---|---|
| Clone Library Name | barley_pub |
>SCRL1_ORYSA (Q84TX2) SCAR-like protein 1| Length = 2097 Score = 198 bits (504), Expect = 1e-50 Identities = 115/213 (53%), Positives = 136/213 (63%), Gaps = 3/213 (1%) Frame = +1 Query: 22 HSSNASDEKN-LKDQSIISGLPSDTTEHTASHSVLEEGNSQESKLQEKDADNLKGGPSEG 198 H+S+AS E N LK+ I S + SD T +AS + EE N + Q EG Sbjct: 1847 HTSDASCEDNKLKNHFITSEVCSDATNLSASGLLTEEENIHNVEDQY-----------EG 1895 Query: 199 QSHTAESMVSEDYPHGDHNLDTESILQPN--PLWPSNISKYLDDLGEGGYAHAEQPPVTG 372 + ES DYPH DHN + E I QP+ P N + + D EGGY HAEQPPV G Sbjct: 1896 PLPSEESSGCLDYPHDDHNSEKEDIHQPDGYAASPGN-NNHFDSSHEGGYLHAEQPPVMG 1954 Query: 373 WTVGPQMLHPNYGISSEGSRFEPEVTDYRLTRKPVSVRNIPRNPLVDAVAAHDRSTMRKV 552 WTV PQMLHPNYGIS E ++FEP+V D+ L +KPVS+RNIPRNPLVDAVAAHDRSTMRKV Sbjct: 1955 WTVRPQMLHPNYGISMEENQFEPKVEDHLLIKKPVSIRNIPRNPLVDAVAAHDRSTMRKV 2014 Query: 553 SELAPATDKPNTNDKNLWLEQIRNKVGELAPTA 651 SEL TDK N++NL LEQIRNK L P + Sbjct: 2015 SELVAPTDKSKPNERNLLLEQIRNKTFNLKPVS 2047
>SCAR2_ARATH (Q5XPJ9) Protein SCAR2 (AtSCAR2) (Protein WAVE4) (Protein DISTORTED3)| (Protein IRREGULAR TRICHOME BRANCH1) Length = 1399 Score = 56.2 bits (134), Expect = 9e-08 Identities = 32/69 (46%), Positives = 39/69 (56%) Frame = +1 Query: 439 PEVTDYRLTRKPVSVRNIPRNPLVDAVAAHDRSTMRKVSELAPATDKPNTNDKNLWLEQI 618 P + Y+ P PR+PLVDAVAAHDR M+KVSE+ K +DK+ L QI Sbjct: 1284 PTLDTYKTEVVPTVRLPRPRSPLVDAVAAHDRRKMKKVSEMVHPPIKSKQDDKDSLLAQI 1343 Query: 619 RNKVGELAP 645 RNK L P Sbjct: 1344 RNKSVNLKP 1352
>DMP1_HUMAN (Q13316) Dentin matrix acidic phosphoprotein 1 precursor (Dentin| matrix protein 1) (DMP-1) Length = 513 Score = 38.9 bits (89), Expect = 0.015 Identities = 27/90 (30%), Positives = 45/90 (50%), Gaps = 2/90 (2%) Frame = +1 Query: 7 TRKEEHSSNASDEKNLKDQSIISGLP--SDTTEHTASHSVLEEGNSQESKLQEKDADNLK 180 +R+E+ S +S+ N ++S S S + E SHS E S+ES +E D+D+ Sbjct: 399 SREEQADSESSESLNFSEESPESPEDENSSSQEGLQSHSSSAESQSEESHSEEDDSDSQD 458 Query: 181 GGPSEGQSHTAESMVSEDYPHGDHNLDTES 270 S+ S++ ES S + N++ ES Sbjct: 459 SSRSKEDSNSTESKSSSEEDGQLKNIEIES 488
>WNK2_HUMAN (Q9Y3S1) Serine/threonine-protein kinase WNK2 (EC 2.7.11.1) (Protein| kinase with no lysine 2) (Protein kinase, lysine-deficient 2) Length = 2297 Score = 37.7 bits (86), Expect = 0.034 Identities = 37/123 (30%), Positives = 54/123 (43%), Gaps = 2/123 (1%) Frame = +1 Query: 115 SVLEEGNSQESKLQEKDADNLKGGPSEGQSHTAESMVSEDYPHGDHNLDTESILQPNPLW 294 +V+E+G S S E ++ G +G+ ++S V P D + ++P + Sbjct: 1671 AVMEQGTSS-SMTAESSPRSMLGYDRDGRQVASDSHVVPSVPQ-----DVPAFVRPARVE 1724 Query: 295 PSNISKYLDDLGEGGYAHAEQPPVTGWTVGPQMLHP-NYGISSEGS-RFEPEVTDYRLTR 468 P++ D GE G + AE PP TVG Q HP G + GS R PE D Sbjct: 1725 PTD-----RDGGEAGESSAEPPPSDMGTVGGQASHPQTLGARALGSPRKRPEQQDVSSPA 1779 Query: 469 KPV 477 K V Sbjct: 1780 KTV 1782
>DMP1_BOVIN (Q95120) Dentin matrix acidic phosphoprotein 1 precursor (Dentin| matrix protein 1) (DMP-1) Length = 510 Score = 33.1 bits (74), Expect = 0.83 Identities = 22/89 (24%), Positives = 35/89 (39%), Gaps = 4/89 (4%) Frame = +1 Query: 13 KEEHSSNASDEKNLKDQSIISGLPSDTTEHTASHSVLEEGNSQESKLQEKDADNLKGGPS 192 K E + + ++ +D + S++++ S SQE L E DN S Sbjct: 314 KSESRQESEENRSPEDSQDVQDPSSESSQEVDLPSQENSSESQEEALHESRGDNPDNATS 373 Query: 193 EGQSHTAESMVSE----DYPHGDHNLDTE 267 + H A+S SE D P + TE Sbjct: 374 HSREHQADSESSEEDVLDKPSDSESTSTE 402
>UME6_YEAST (P39001) Transcriptional regulator UME6 (Negative transcriptional| regulator of IME2) Length = 836 Score = 32.7 bits (73), Expect = 1.1 Identities = 45/207 (21%), Positives = 71/207 (34%), Gaps = 7/207 (3%) Frame = +1 Query: 82 PSDTTEHTASHSVLEEGNSQESKLQEKDADNLKGGPSEGQSHTAESMVSEDYPHGDHNLD 261 P++T HT S S L+ + ++K P E + T + +D D+ + Sbjct: 96 PNNTPVHTPSGS---------PSLKVQSGGDIKDDPKENDTTTTTNTTLQDRRDSDNAVH 146 Query: 262 TESILQPNPLWPSNISKYLDDLGEGGYAHAEQPPVTGWTVGPQMLHPNYGISSEGSRFEP 441 + +PL PSN L G A A P ++G + P Y ++E Sbjct: 147 AAA----SPLAPSNTPSDPKSLCNGHVAQATDPQISG------AIQPQYTATNEDV---- 192 Query: 442 EVTDYRLTRKPVSVRNIPRNPLVDAVAAHDRSTMRKVSELAPATDKPNTNDKNLWL---E 612 P S + N + A + + APA P T Sbjct: 193 ---------FPYSSTSTNSNTATTTIVAGAKKKIHLPPPQAPAVSSPGTTAAGSGAGTGS 243 Query: 613 QIRNKVGELAP----TADKPNTNDXNS 681 IR++ G P +A+K N NS Sbjct: 244 GIRSRTGSDLPLIITSANKNNGKTTNS 270
>MUTS2_BACSU (P94545) MutS2 protein| Length = 785 Score = 32.3 bits (72), Expect = 1.4 Identities = 21/65 (32%), Positives = 30/65 (46%) Frame = +1 Query: 148 KLQEKDADNLKGGPSEGQSHTAESMVSEDYPHGDHNLDTESILQPNPLWPSNISKYLDDL 327 K++EKD + +K P + ++ +DY H LD N L S + KYLDD Sbjct: 675 KVKEKDLEFIKSAPEPKKEKMITAVKGKDY-HVSLELDLRGERYENAL--SRVEKYLDDA 731 Query: 328 GEGGY 342 GY Sbjct: 732 VLAGY 736
>PFA4_USTMA (Q4PE27) Palmitoyltransferase PFA4 (EC 2.3.1.-) (Protein fatty| acyltransferase 4) Length = 604 Score = 32.0 bits (71), Expect = 1.8 Identities = 19/51 (37%), Positives = 28/51 (54%), Gaps = 5/51 (9%) Frame = -2 Query: 312 FTYIARP---QRVWL--KYTLCVQVMITMRIIFRYH*FCSM*LAFRRTTLE 175 +TY P + VWL Y LC+ V++ + I YH +C LA +TT+E Sbjct: 255 YTYWREPCARELVWLVVNYALCIPVILLVGIFSLYHFYC---LAVNQTTIE 302
>YNL0_YEAST (P53927) Hypothetical 25.4 kDa protein in CYB5-LEU4 intergenic| region Length = 220 Score = 32.0 bits (71), Expect = 1.8 Identities = 23/79 (29%), Positives = 38/79 (48%), Gaps = 1/79 (1%) Frame = +1 Query: 19 EHSSNASDEKNLKDQSIISGLPSDTTEHTASHSVLE-EGNSQESKLQEKDADNLKGGPSE 195 E SS++SDE++ KD+ I GL + E + +H + Q ++ + KD L Sbjct: 33 ETSSSSSDEEDEKDEDEIEGLAASDDEQSGTHKIKRLNPKKQANEKKSKDKKTL------ 86 Query: 196 GQSHTAESMVSEDYPHGDH 252 + ++ VS PHG H Sbjct: 87 -EEYSGIIYVSR-LPHGFH 103
>ARR2_ARATH (Q9ZWJ9) Two-component response regulator ARR2 (Receiver-like| protein 5) Length = 664 Score = 31.2 bits (69), Expect = 3.1 Identities = 18/71 (25%), Positives = 35/71 (49%), Gaps = 2/71 (2%) Frame = +1 Query: 88 DTTEHTASHSVLEEGNSQESKLQEK-DADNLKGGPSEGQSHTAESMVSEDY-PHGDHNLD 261 + +EH+ S+ + G ++ + Q + DADN +EG ++ E+ GD D Sbjct: 152 NVSEHSGG-SIEDTGGDRDRQQQHREDADNNSSSVNEGNGRSSRKRKEEEVDDQGDDKED 210 Query: 262 TESILQPNPLW 294 + S+ +P +W Sbjct: 211 SSSLKKPRVVW 221
>SM3L3_ARATH (Q9FIY7) Putative SWI/SNF-related matrix-associated actin-dependent| regulator of chromatin subfamily A member 3-like 3 (EC 3.6.1.-) (SMARCA3-like protein 3) Length = 1277 Score = 31.2 bits (69), Expect = 3.1 Identities = 36/132 (27%), Positives = 54/132 (40%), Gaps = 7/132 (5%) Frame = +1 Query: 118 VLEEGNSQESKLQEKDADNL-KGGPSEGQSHTAESMVSEDY-PHGDHNLDTESILQPNPL 291 VLE+ S+ +K E++ D+L G S+G S M E Y P G + IL P PL Sbjct: 260 VLEDQPSEINKKLEQENDDLFSSGDSDGTSAKRRKMEMESYAPVGVES----CILAPTPL 315 Query: 292 ---WPSNIS--KYLDDLGEGGYAHAEQPPVTGWTVGPQMLHPNYGISSEGSRFEPEVTDY 456 P + + +D E Y H + PV V + E +F E Sbjct: 316 RVVKPEKLDTPEVIDLESEKSYTHVKMEPVEEIKVEAVKMSSQV----EDVKFSREQKSV 371 Query: 457 RLTRKPVSVRNI 492 + ++PV R + Sbjct: 372 YVKKEPVGARKV 383
>EI2BE_SCHPO (P56287) Probable translation initiation factor eIF-2B epsilon| subunit (eIF-2B GDP-GTP exchange factor) Length = 678 Score = 31.2 bits (69), Expect = 3.1 Identities = 22/92 (23%), Positives = 43/92 (46%) Frame = +1 Query: 4 GTRKEEHSSNASDEKNLKDQSIISGLPSDTTEHTASHSVLEEGNSQESKLQEKDADNLKG 183 G +E H+ SD++ ++ SGL T E L +S+ S+ ++++ Sbjct: 441 GRGQEYHAEEDSDDEGEFMEA--SGLIESTNE-------LHLSDSESSETSSSSEEDMEF 491 Query: 184 GPSEGQSHTAESMVSEDYPHGDHNLDTESILQ 279 P + +A ++ SED+ GD N + + L+ Sbjct: 492 IPFSARRDSANTINSEDFDEGDFNKEAQQSLE 523
>YD282_YEAST (Q05648) Hypothetical protein YDR282C| Length = 414 Score = 30.8 bits (68), Expect = 4.1 Identities = 16/44 (36%), Positives = 25/44 (56%) Frame = -3 Query: 152 NLLSWLLPSSNTECDAVCSVVSEGNPLMIDWSFRFFSSDAFELC 21 N+L+ L S EC A+ S+++E N ++W + AFELC Sbjct: 347 NILNSKLDYSTDECRALISLLNERNSTFLEWIIIYLI--AFELC 388
>EVI1_MOUSE (P14404) Ecotropic virus integration 1 site protein| Length = 1042 Score = 30.4 bits (67), Expect = 5.4 Identities = 27/102 (26%), Positives = 49/102 (48%) Frame = +1 Query: 7 TRKEEHSSNASDEKNLKDQSIISGLPSDTTEHTASHSVLEEGNSQESKLQEKDADNLKGG 186 T K+EH++++ ++++QS +SG +D+ + AS + G++ LQ+K L Sbjct: 445 TNKKEHNNHSVFSASVEEQSAVSGAVNDSIKAIASIAEKYFGSTGLVGLQDKKVGALP-Y 503 Query: 187 PSEGQSHTAESMVSEDYPHGDHNLDTESILQPNPLWPSNISK 312 PS + YP D +L + L+ P PS + K Sbjct: 504 PSMFPLPFFPAFSQSMYPFPDRDLRSLP-LKMEPQSPSEVKK 544
>MAGC1_HUMAN (O60732) Melanoma-associated antigen C1 (MAGE-C1 antigen)| (Cancer-testis antigen CT7) Length = 1142 Score = 30.4 bits (67), Expect = 5.4 Identities = 24/99 (24%), Positives = 41/99 (41%), Gaps = 1/99 (1%) Frame = +1 Query: 34 ASDEKNLKDQSIISGLPSDTTEHTASHSVLEEGNSQESKLQEKDADNLKGGPSEGQSHTA 213 +S +L S +S PS T+ + S E Q + + +L E S Sbjct: 819 SSTSSSLSQSSPVSSFPSSTSSSLSKSS--PESPLQSPVISFSSSTSLSPFSEESSSPVD 876 Query: 214 ESMVSED-YPHGDHNLDTESILQPNPLWPSNISKYLDDL 327 E S D D D+ES+++ PL+ + + +D+L Sbjct: 877 EYTSSSDTLLESDSLTDSESLIESEPLFTYTLDEKVDEL 915
>WRKY4_ARATH (Q9XI90) Probable WRKY transcription factor 4 (WRKY DNA-binding| protein 4) Length = 514 Score = 30.0 bits (66), Expect = 7.0 Identities = 21/83 (25%), Positives = 39/83 (46%) Frame = +1 Query: 19 EHSSNASDEKNLKDQSIISGLPSDTTEHTASHSVLEEGNSQESKLQEKDADNLKGGPSEG 198 + +N+S++ + +S + TTEH + S EE + E+ ++EKD + + Sbjct: 319 QFQTNSSNKTKREQHEAVS--QATTTEHLSEASDGEEVGNGETDVREKDENE-----PDP 371 Query: 199 QSHTAESMVSEDYPHGDHNLDTE 267 + + E +SE P H TE Sbjct: 372 KRRSTEVRISEPAPAASHRTVTE 394
>UFC1_MOUSE (Q9CR09) Ufm1-conjugating enzyme 1 (Ubiquitin-fold| modifier-conjugating enzyme 1) Length = 167 Score = 30.0 bits (66), Expect = 7.0 Identities = 14/52 (26%), Positives = 24/52 (46%) Frame = +1 Query: 529 DRSTMRKVSELAPATDKPNTNDKNLWLEQIRNKVGELAPTADKPNTNDXNSW 684 D +T R VSE+ D+ LW+++++ + L + N N N W Sbjct: 3 DEATRRVVSEIPVLKTNAGPRDRELWVQRLKEEYQSLIRYVEN-NKNSDNDW 53
>RHSA_ECOLI (P16916) Protein rhsA precursor| Length = 1377 Score = 29.6 bits (65), Expect = 9.1 Identities = 10/18 (55%), Positives = 13/18 (72%) Frame = -2 Query: 396 KHLRSNSPSRHWWLLGMC 343 ++L +NSP WWLLG C Sbjct: 172 RYLATNSPQGPWWLLGWC 189
>RHSC_ECOLI (P16918) Protein rhsC precursor| Length = 1397 Score = 29.6 bits (65), Expect = 9.1 Identities = 10/18 (55%), Positives = 13/18 (72%) Frame = -2 Query: 396 KHLRSNSPSRHWWLLGMC 343 ++L +NSP WWLLG C Sbjct: 172 RYLATNSPQGPWWLLGWC 189
>RHSB_ECOLI (P16917) Protein rhsB precursor| Length = 1411 Score = 29.6 bits (65), Expect = 9.1 Identities = 10/18 (55%), Positives = 13/18 (72%) Frame = -2 Query: 396 KHLRSNSPSRHWWLLGMC 343 ++L +NSP WWLLG C Sbjct: 172 RYLATNSPQGPWWLLGWC 189
>DMP1_MOUSE (O55188) Dentin matrix acidic phosphoprotein 1 precursor (Dentin| matrix protein 1) (DMP-1) (AG1) Length = 503 Score = 29.6 bits (65), Expect = 9.1 Identities = 19/81 (23%), Positives = 35/81 (43%) Frame = +1 Query: 4 GTRKEEHSSNASDEKNLKDQSIISGLPSDTTEHTASHSVLEEGNSQESKLQEKDADNLKG 183 G R+ + ++ D ++++ S S S +E + + + + +D + + Sbjct: 239 GDREPTSTQDSDDSQSVEFSSRKSFRRSRVSEEDYRGELTDSNSRETQSDSTEDTASKEE 298 Query: 184 GPSEGQSHTAESMVSEDYPHG 246 SE Q TAES ED P G Sbjct: 299 SRSESQEDTAESQSQEDSPEG 319
>Y028_ARCFU (O30207) Hypothetical protein AF0028| Length = 371 Score = 29.6 bits (65), Expect = 9.1 Identities = 19/61 (31%), Positives = 29/61 (47%), Gaps = 6/61 (9%) Frame = -3 Query: 695 ICSSHEFXSLVFGLSAVGASSPTL------FLICSSHKFLSLVFGLSVAGASSETFRIVL 534 +CS ++ LV G A+G +L F++ S HK ++ + V G E IVL Sbjct: 172 VCSEYDVPLLVNGAYAIGRMPVSLKEIGADFIVGSGHKSMAASGPIGVMGMKEEWAEIVL 231 Query: 533 R 531 R Sbjct: 232 R 232 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.305 0.126 0.366 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 105,051,922 Number of Sequences: 219361 Number of extensions: 2314365 Number of successful extensions: 3937 Number of sequences better than 10.0: 22 Number of HSP's better than 10.0 without gapping: 3775 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3934 length of database: 80,573,946 effective HSP length: 109 effective length of database: 56,663,597 effective search space used: 6912958834 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 43 (21.9 bits)
