>RUVB_CHLCH (Q3APQ7) Holliday junction ATP-dependent DNA helicase ruvB (EC|
           3.6.1.-)
          Length = 352

 Score = 30.0 bits (66), Expect = 5.4
 Identities = 23/67 (34%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
 Frame = +1

Query: 406 VDPIVASFSGGAVGVIS-ALMVVEINNVKQQEHKRCKYCLGTGYLACARCSSTGAVVLTE 582
           +D IV  FSGG VG+ S A+ V E  +  ++ ++   Y +  GYLA    ++ G V   +
Sbjct: 267 MDTIVNKFSGGPVGIASLAVSVGEERDTIEEVYE--PYLIQAGYLA---RTTRGRVATRK 321

Query: 583 PVSTFSD 603
             S F+D
Sbjct: 322 AFSRFAD 328


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 81,997,767
Number of Sequences: 219361
Number of extensions: 1630453
Number of successful extensions: 3812
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 3690
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3806
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5310515667
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)