ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal9e07 |
|---|---|
| Clone Library Name | barley_pub |
>SLSG0_BRAOA (P22551) S-locus-specific glycoprotein precursor| Length = 444 Score = 84.7 bits (208), Expect = 1e-16 Identities = 39/91 (42%), Positives = 58/91 (63%) Frame = +2 Query: 2 TNLSCGAGDGFWTVSRMKLPEATSATVHAGMTLDRCRQLCLGNCSCGAYAAADVSGGINR 181 + LSCG GDGF +S+MKLPE + A V + L CR+ C+ +C+C YA D+ G Sbjct: 352 SKLSCGEGDGFLRMSQMKLPETSEAVVDKRIGLKECREKCVRDCNCTGYANMDIMNG-GS 410 Query: 182 GCVVWAVDLIDMRQYPEVVQDVYIRLAQSEV 274 GCV+W +L DMR+Y QD+Y+++A + + Sbjct: 411 GCVMWTGELDDMRKYNAGGQDLYVKVAAASL 441
>SLSG1_BRAOA (P22552) S-locus-specific glycoprotein BS29-1 precursor| Length = 444 Score = 84.3 bits (207), Expect = 2e-16 Identities = 39/91 (42%), Positives = 58/91 (63%) Frame = +2 Query: 2 TNLSCGAGDGFWTVSRMKLPEATSATVHAGMTLDRCRQLCLGNCSCGAYAAADVSGGINR 181 + LSCG GDGF +S+MKLPE + A V + L CR+ C+ +C+C YA D+ G Sbjct: 352 SKLSCGEGDGFLRMSQMKLPETSEAVVDKRIGLKECREKCVRDCNCTGYANMDIMNG-GS 410 Query: 182 GCVVWAVDLIDMRQYPEVVQDVYIRLAQSEV 274 GCV+W +L DMR+Y QD+Y+++A + + Sbjct: 411 GCVMWTGELDDMRKYNAGGQDLYLKVAAASL 441
>SLSG3_BRAOL (P17840) S-locus-specific glycoprotein S13 precursor (SLSG-13)| (Fragment) Length = 434 Score = 82.4 bits (202), Expect = 7e-16 Identities = 41/91 (45%), Positives = 57/91 (62%) Frame = +2 Query: 2 TNLSCGAGDGFWTVSRMKLPEATSATVHAGMTLDRCRQLCLGNCSCGAYAAADVSGGINR 181 T LSC +GDGF + MKLPE T A VH + L C + CL +C+C A+A AD+ Sbjct: 345 TRLSC-SGDGFTRMKNMKLPETTMAIVHRSIGLKECEKRCLSDCNCTAFANADIRNR-GT 402 Query: 182 GCVVWAVDLIDMRQYPEVVQDVYIRLAQSEV 274 GCV+W +L D+R Y QD+Y+RLA +++ Sbjct: 403 GCVIWTGELEDIRTYFADGQDLYVRLAAADL 433
>SLSG2_BRAOA (P22553) S-locus-specific glycoprotein BS29-2 precursor| Length = 435 Score = 82.0 bits (201), Expect = 1e-15 Identities = 41/91 (45%), Positives = 57/91 (62%) Frame = +2 Query: 2 TNLSCGAGDGFWTVSRMKLPEATSATVHAGMTLDRCRQLCLGNCSCGAYAAADVSGGINR 181 T LSC +GDGF + +MKLPE T A V + L C + CL +C+C A+A AD+ G Sbjct: 346 TRLSC-SGDGFTRMKKMKLPETTMAIVDRSIGLKECEKRCLSDCNCTAFANADIRNG-GT 403 Query: 182 GCVVWAVDLIDMRQYPEVVQDVYIRLAQSEV 274 GCV+W L D+R Y QD+Y+RLA +++ Sbjct: 404 GCVIWTGQLEDIRTYFANGQDLYVRLAPADL 434
>SLSG6_BRAOL (P07761) S-locus-specific glycoprotein S6 precursor (SLSG-6)| Length = 436 Score = 81.6 bits (200), Expect = 1e-15 Identities = 41/91 (45%), Positives = 56/91 (61%) Frame = +2 Query: 2 TNLSCGAGDGFWTVSRMKLPEATSATVHAGMTLDRCRQLCLGNCSCGAYAAADVSGGINR 181 T LSC +GDGF + MKLPE T A V + + C + CL +C+C A+A AD+ G Sbjct: 347 TRLSC-SGDGFTRMKNMKLPETTMAIVDRSIGVKECEKRCLSDCNCTAFANADIRNG-GT 404 Query: 182 GCVVWAVDLIDMRQYPEVVQDVYIRLAQSEV 274 GCV+W L DMR Y QD+Y+RLA +++ Sbjct: 405 GCVIWTGRLDDMRNYVAHGQDLYVRLAVADL 435
>SRK6_BRAOE (Q09092) Putative serine/threonine-protein kinase receptor| precursor (EC 2.7.11.1) (S-receptor kinase) (SRK) Length = 849 Score = 80.9 bits (198), Expect = 2e-15 Identities = 40/94 (42%), Positives = 59/94 (62%), Gaps = 3/94 (3%) Frame = +2 Query: 2 TNLSCGAGDGFWTVSRMKLPEATSATVHAGMTLDRCRQLCLGNCSCGAYAAADVSGGINR 181 T LSC +GDGF + +MKLPE T ATV + + C++ C+ +C+C A+A AD+ G Sbjct: 346 TQLSC-SGDGFTRMKKMKLPETTMATVDRSIGVKECKKRCISDCNCTAFANADIRNG-GS 403 Query: 182 GCVVWAVDLIDMRQYPEVV---QDVYIRLAQSEV 274 GCV+W L D+R Y QD+Y+RLA +++ Sbjct: 404 GCVIWTERLEDIRNYATDAIDGQDLYVRLAAADI 437
>SLSG4_BRAOL (P17841) S-locus-specific glycoprotein S14 precursor (SLSG-14)| (Fragment) Length = 434 Score = 73.6 bits (179), Expect = 3e-13 Identities = 40/94 (42%), Positives = 56/94 (59%), Gaps = 3/94 (3%) Frame = +2 Query: 2 TNLSCGAGDGFWTVSRMKLPEATSATVHAGMTLDRCRQLCLGNCSCGAYAAADVSGGINR 181 T LS G+GDGF + MKLPE T A V + + C + CL +C+C A+A AD+ G Sbjct: 342 TRLS-GSGDGFTRMKNMKLPETTMAIVDRSIGVKECEKRCLNDCNCTAFANADIRNG-GT 399 Query: 182 GCVVWAVDLIDMRQYPEVV---QDVYIRLAQSEV 274 GCV+ +L DMR Y QD+Y+RLA +++ Sbjct: 400 GCVINTGELEDMRSYATGATDSQDLYVRLAAADI 433
>Y4UE_RHISN (Q53198) Putative transposase y4uE| Length = 359 Score = 31.6 bits (70), Expect = 1.5 Identities = 16/28 (57%), Positives = 17/28 (60%), Gaps = 2/28 (7%) Frame = -1 Query: 79 RRAGRLRQL--HPAHCPEPVSGPAAQVG 2 RR R+RQ H AHCP P PAAQ G Sbjct: 307 RRNDRIRQRPRHYAHCPHPPRQPAAQTG 334
>NOTC1_MOUSE (Q01705) Neurogenic locus notch homolog protein 1 precursor (Notch| 1) (Motch A) (mT14) (p300) [Contains: Notch 1 extracellular truncation; Notch 1 intracellular domain] Length = 2531 Score = 31.2 bits (69), Expect = 1.9 Identities = 23/66 (34%), Positives = 32/66 (48%), Gaps = 7/66 (10%) Frame = -2 Query: 183 PRLMPPLT------SAAAYAPQLQLPRHSCLHRSKVMPAC-TVALVASGSFIRLTVQNPS 25 PRL+ PL + AA + P +CL+ + A T A VASGSF+ Q+P+ Sbjct: 2 PRLLTPLLCLTLLPARAARGLRCSQPSGTCLNGGRCEVASGTEACVASGSFVGQRCQDPN 61 Query: 24 PAPQLR 7 P R Sbjct: 62 PCLSTR 67
>PI3K2_DICDI (P54674) Phosphatidylinositol 3-kinase 2 (EC 2.7.1.137)| (PI3-kinase) (PtdIns-3-kinase) (PI3K) Length = 1858 Score = 30.4 bits (67), Expect = 3.3 Identities = 23/93 (24%), Positives = 39/93 (41%) Frame = -2 Query: 297 SAAAVKASTSDCARRMYTSCTTSGYCRMSMRSTAQTTHPRLMPPLTSAAAYAPQLQLPRH 118 S+++ +S+S + S + ST+ T PRL P TS P Q + Sbjct: 371 SSSSPSSSSSSSTSTVVPIVQLSSSNSTNSPSTSLPTTPRLSQPTTSYTQLIPSQQQQQP 430 Query: 117 SCLHRSKVMPACTVALVASGSFIRLTVQNPSPA 19 + + S T + +S S LT+ +P P+ Sbjct: 431 TESNSSSNTNTTTTSSSSSSSSSSLTISSPQPS 463
>DAN4_YEAST (P47179) Cell wall protein DAN4 precursor| Length = 1161 Score = 30.4 bits (67), Expect = 3.3 Identities = 22/73 (30%), Positives = 28/73 (38%) Frame = -2 Query: 357 STPEILATTAITSTTWLRRRSAAAVKASTSDCARRMYTSCTTSGYCRMSMRSTAQTTHPR 178 ST +TT TSTT ++ T+ T+ TTS S ST TT Sbjct: 144 STTSTTSTTPTTSTTSTTPTTSTTSTTPTTSTTSTTPTTSTTSTTPTTSTTSTTPTTSTT 203 Query: 177 LMPPLTSAAAYAP 139 P TS + P Sbjct: 204 STTPTTSTTSTTP 216 Score = 29.3 bits (64), Expect = 7.4 Identities = 23/73 (31%), Positives = 30/73 (41%) Frame = -2 Query: 357 STPEILATTAITSTTWLRRRSAAAVKASTSDCARRMYTSCTTSGYCRMSMRSTAQTTHPR 178 ST TT+ TSTT ++ ST+ T+ TTS S ST TT Sbjct: 192 STTSTTPTTSTTSTTPTTSTTSTTPTTSTTSTTPTTSTTPTTSTTSTTSQTSTKSTT--- 248 Query: 177 LMPPLTSAAAYAP 139 P TS+ + P Sbjct: 249 ---PTTSSTSTTP 258 Score = 28.9 bits (63), Expect = 9.6 Identities = 23/73 (31%), Positives = 29/73 (39%) Frame = -2 Query: 357 STPEILATTAITSTTWLRRRSAAAVKASTSDCARRMYTSCTTSGYCRMSMRSTAQTTHPR 178 ST TT+ T TT ++ ST+ T+ TTS S STA TT Sbjct: 219 STTSTTPTTSTTPTTSTTSTTSQTSTKSTTPTTSSTSTTPTTSTTPTTSTTSTAPTTSTT 278 Query: 177 LMPPLTSAAAYAP 139 TS + AP Sbjct: 279 STTSTTSTISTAP 291 Score = 28.9 bits (63), Expect = 9.6 Identities = 21/72 (29%), Positives = 27/72 (37%) Frame = -2 Query: 354 TPEILATTAITSTTWLRRRSAAAVKASTSDCARRMYTSCTTSGYCRMSMRSTAQTTHPRL 175 T +TT TSTT ++ T+ T+ TTS S ST TT Sbjct: 154 TTSTTSTTPTTSTTSTTPTTSTTSTTPTTSTTSTTPTTSTTSTTPTTSTTSTTPTTSTTS 213 Query: 174 MPPLTSAAAYAP 139 P TS + P Sbjct: 214 TTPTTSTTSTTP 225
>TLE2_MOUSE (Q9WVB2) Transducin-like enhancer protein 2| Length = 767 Score = 30.4 bits (67), Expect = 3.3 Identities = 20/72 (27%), Positives = 29/72 (40%) Frame = -2 Query: 237 TTSGYCRMSMRSTAQTTHPRLMPPLTSAAAYAPQLQLPRHSCLHRSKVMPACTVALVASG 58 + S C+++ + A T L PLT ++ + L HS L+ MP V L S Sbjct: 344 SASHLCQLAAQPAAPTDSIALRSPLTLSSPFTSSFSLGSHSTLNGDLSMPGSYVGLHLSP 403 Query: 57 SFIRLTVQNPSP 22 V SP Sbjct: 404 QVSSSVVYGRSP 415
>RPC_BPPHC (P08979) Repressor protein C| Length = 683 Score = 30.0 bits (66), Expect = 4.3 Identities = 21/67 (31%), Positives = 28/67 (41%), Gaps = 2/67 (2%) Frame = -1 Query: 445 VPSAAGRRRFSSRPVSPETETAXXXXXXXKHAGDTRDDGDHKH--DMASSPVSCSGQGID 272 V A R PV+PE E A + A D D + D+ V QG+D Sbjct: 358 VKEARTARETELTPVTPEAEAAKAEVESRRSADVAEDFNDIEGVPDLIKDGVKLFSQGVD 417 Query: 271 LGLRETD 251 LGL+ T+ Sbjct: 418 LGLKLTN 424
>VP5_AHSV9 (Q96597) Outer capsid protein VP5| Length = 505 Score = 29.6 bits (65), Expect = 5.6 Identities = 13/24 (54%), Positives = 18/24 (75%) Frame = -2 Query: 318 TTWLRRRSAAAVKASTSDCARRMY 247 T++L+R +A KA TSD A+RMY Sbjct: 5 TSFLKRAGSATKKALTSDAAKRMY 28
>MUC1_XENLA (Q05049) Integumentary mucin C.1 (FIM-C.1) (Fragment)| Length = 662 Score = 29.3 bits (64), Expect = 7.4 Identities = 17/59 (28%), Positives = 26/59 (44%) Frame = -2 Query: 357 STPEILATTAITSTTWLRRRSAAAVKASTSDCARRMYTSCTTSGYCRMSMRSTAQTTHP 181 +TP TT T+TT + + +T+ T+ TTSG C+M A +P Sbjct: 484 TTPTTTTTTPTTTTT---KATTTTPTTTTTTTTTTKATTTTTSGECKMEPSKRADCGYP 539
>WC1_NEUCR (Q01371) White collar 1 protein (WC1)| Length = 1167 Score = 28.9 bits (63), Expect = 9.6 Identities = 21/74 (28%), Positives = 35/74 (47%), Gaps = 1/74 (1%) Frame = -2 Query: 336 TTAITSTTWLRRRSAAAVKASTSDCARRMYTSCTTSGYCRMSMRS-TAQTTHPRLMPPLT 160 TTA ++ LR S A T+D + +S + +G ++ + +A +T L PP T Sbjct: 1009 TTATKNSPSLRGSSTTAPGTITTDSGPAVASSASGTGSTTIATSANSAASTVNALGPPAT 1068 Query: 159 SAAAYAPQLQLPRH 118 + +P LP H Sbjct: 1069 GPSGGSPAQHLPPH 1082
>TLE2_HUMAN (Q04725) Transducin-like enhancer protein 2 (ESG2)| Length = 743 Score = 28.9 bits (63), Expect = 9.6 Identities = 18/72 (25%), Positives = 30/72 (41%) Frame = -2 Query: 237 TTSGYCRMSMRSTAQTTHPRLMPPLTSAAAYAPQLQLPRHSCLHRSKVMPACTVALVASG 58 + S C+++ + T L PLT ++ + L HS L+ +P+ V+L S Sbjct: 319 SASHLCQLAAKPAPSTDSVALRSPLTLSSPFTTSFSLGSHSTLNGDLSVPSSYVSLHLSP 378 Query: 57 SFIRLTVQNPSP 22 V SP Sbjct: 379 QVSSSVVYGRSP 390 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 59,804,987 Number of Sequences: 219361 Number of extensions: 1018942 Number of successful extensions: 3700 Number of sequences better than 10.0: 17 Number of HSP's better than 10.0 without gapping: 3566 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3688 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 4258037034 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
