ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal9e07
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_191518.1| Oryza sativa (japonica cultivar-group), predic... 262 1e-66
2dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 258 2e-65
3dbj|AP003406.3| Oryza sativa (japonica cultivar-group) genomic D... 258 2e-65
4dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.47
5gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 44 0.47
6emb|AL831807.7|CNS08CAK Oryza sativa chromosome 12, . BAC OSJNBa... 44 0.47
7emb|AL732647.4|CNS08C9M Oryza sativa chromosome 12, . BAC OSJNBb... 44 0.47
8ref|NM_190200.1| Oryza sativa (japonica cultivar-group), predic... 42 1.9
9gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome 42 1.9
10gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete ge... 42 1.9
11emb|AL445586.6| Human DNA sequence from clone RP11-352F21 on chr... 42 1.9
12emb|BX842576.1| Mycobacterium tuberculosis H37Rv complete genome... 42 1.9
13emb|BX248338.1| Mycobacterium bovis subsp. bovis AF2122/97 compl... 42 1.9
14dbj|AP003346.4| Oryza sativa (japonica cultivar-group) genomic D... 42 1.9
15dbj|AP003431.2| Oryza sativa (japonica cultivar-group) genomic D... 42 1.9
16dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete ... 42 1.9
17dbj|AK102902.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.9
18gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. ... 42 1.9
19ref|NM_189918.1| Oryza sativa (japonica cultivar-group), predic... 40 7.3
20gb|AC159422.1| Trypanosoma brucei chromosome 5 clone RPCI93-26C7... 40 7.3
21ref|XM_478647.1| Oryza sativa (japonica cultivar-group), mRNA 40 7.3
22gb|CP000068.1| Trypanosoma brucei chromosome 5, complete sequence 40 7.3
23ref|XM_869649.1| PREDICTED: Bos taurus similar to Placental thro... 40 7.3
24ref|XM_381475.1| Gibberella zeae PH-1 chromosome 1 hypothetical ... 40 7.3
25gb|AC116571.5| Mus musculus BAC clone RP23-97B18 from 6, complet... 40 7.3
26emb|AL353779.11| Human DNA sequence from clone RP1-43O17 on chro... 40 7.3
27gb|U32222.1|B1U32222 Bacteriophage 186, complete sequence 40 7.3
28gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome 40 7.3
29gb|CP000232.1| Moorella thermoacetica ATCC 39073, complete genome 40 7.3
30ref|XM_397589.2| PREDICTED: Apis mellifera similar to Adam-PA (L... 40 7.3
31dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.3
32dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.3
33gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome 40 7.3
34gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 40 7.3
35dbj|AP003433.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.3
36dbj|AP003436.2| Oryza sativa (japonica cultivar-group) genomic D... 40 7.3
37gb|AC138117.4| Mus musculus BAC clone RP24-146K16 from chromosom... 40 7.3
38dbj|AP004401.5| Oryza sativa (japonica cultivar-group) genomic D... 40 7.3
39dbj|AP004278.2| Oryza sativa (japonica cultivar-group) genomic D... 40 7.3
40ref|NM_174789.1| Bos taurus serine (or cysteine) proteinase inhi... 40 7.3
41dbj|AK110828.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 7.3
42dbj|AP005126.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.3
43dbj|D55670.1| Bos taurus mRNA for thrombin inhibitor, complete cds 40 7.3 
>ref|NM_191518.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2571

 Score =  262 bits (132), Expect = 1e-66
 Identities = 240/276 (86%)
 Strand = Plus / Plus

                                                                        
Query: 20   gccggagacgggttctggacagtgagccggatgaagctgccggaggcgaccagcgcgacg 79
            ||||| |||||||||||||| |||| | ||||||||||||||| |||||| | |||||||
Sbjct: 1039 gccggcgacgggttctggacggtgaacaggatgaagctgccggcggcgacgaacgcgacg 1098

                                                                        
Query: 80   gtgcacgccggcatgaccttggaccggtgcaggcagctgtgcctcggcaactgcagctgc 139
            ||| |||||||||||||  |||||| |||||||||| ||||||| |||||||||||||||
Sbjct: 1099 gtgtacgccggcatgacgctggaccagtgcaggcaggtgtgcctgggcaactgcagctgc 1158

                                                                        
Query: 140  ggggcgtacgccgcggcggacgtcagcgggggcatcaaccgcgggtgcgtcgtctgggcc 199
             ||||||||||||||||| |||  ||||| ||  ||| ||||||||||||| ||||||||
Sbjct: 1159 agggcgtacgccgcggcgaacgcaagcggcggggtcagccgcgggtgcgtcatctgggcc 1218

                                                                        
Query: 200  gtggatctcatcgacatgcggcagtacccggaggtcgtgcaggatgtgtacatccgtctc 259
            || |||||  | |||||| |||||||| | | ||||||||||||||| |||||||| |||
Sbjct: 1219 gtcgatctgctggacatgaggcagtactccggggtcgtgcaggatgtctacatccggctc 1278

                                                
Query: 260  gcgcagtccgaggtcgatgccttgaccgctgcagct 295
            |||||||||||||| || ||||||| ||| ||||||
Sbjct: 1279 gcgcagtccgaggtagacgccttgaacgccgcagct 1314
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  258 bits (130), Expect = 2e-65
 Identities = 238/274 (86%)
 Strand = Plus / Plus

                                                                            
Query: 20       gccggagacgggttctggacagtgagccggatgaagctgccggaggcgaccagcgcgacg 79
                ||||| |||||||||||||| |||| | ||||||||||||||| |||||| | |||||||
Sbjct: 33221948 gccggcgacgggttctggacggtgaacaggatgaagctgccggcggcgacgaacgcgacg 33222007

                                                                            
Query: 80       gtgcacgccggcatgaccttggaccggtgcaggcagctgtgcctcggcaactgcagctgc 139
                ||| |||||||||||||  |||||| |||||||||| ||||||| |||||||||||||||
Sbjct: 33222008 gtgtacgccggcatgacgctggaccagtgcaggcaggtgtgcctgggcaactgcagctgc 33222067

                                                                            
Query: 140      ggggcgtacgccgcggcggacgtcagcgggggcatcaaccgcgggtgcgtcgtctgggcc 199
                 ||||||||||||||||| |||  ||||| ||  ||| ||||||||||||| ||||||||
Sbjct: 33222068 agggcgtacgccgcggcgaacgcaagcggcggggtcagccgcgggtgcgtcatctgggcc 33222127

                                                                            
Query: 200      gtggatctcatcgacatgcggcagtacccggaggtcgtgcaggatgtgtacatccgtctc 259
                || |||||  | |||||| |||||||| | | ||||||||||||||| |||||||| |||
Sbjct: 33222128 gtcgatctgctggacatgaggcagtactccggggtcgtgcaggatgtctacatccggctc 33222187

                                                  
Query: 260      gcgcagtccgaggtcgatgccttgaccgctgcag 293
                |||||||||||||| || ||||||| ||| ||||
Sbjct: 33222188 gcgcagtccgaggtagacgccttgaacgccgcag 33222221



 Score =  170 bits (86), Expect = 3e-39
 Identities = 233/282 (82%)
 Strand = Plus / Plus

                                                                            
Query: 3        ccaacctgagctgcggggccggagacgggttctggacagtgagccggatgaagctgccgg 62
                ||||||||| ||||||||  || || |||||||||   |||| | |||||||||||||||
Sbjct: 33233094 ccaacctgacctgcggggatggcgatgggttctggcgggtgaacaggatgaagctgccgg 33233153

                                                                            
Query: 63       aggcgaccagcgcgacggtgcacgccggcatgaccttggaccggtgcaggcagctgtgcc 122
                ||||||| |  |||||||||||||||||||||||  |||||| ||||||||||  |||||
Sbjct: 33233154 aggcgacgaaggcgacggtgcacgccggcatgacgctggaccagtgcaggcaggcgtgcc 33233213

                                                                            
Query: 123      tcggcaactgcagctgcggggcgtacgccgcggcggacgtcagcgggggcatcaaccgcg 182
                |  ||||||||||||||   ||||||||||||||| |||| ||||| ||   ||  ||||
Sbjct: 33233214 tgcgcaactgcagctgcaacgcgtacgccgcggcgaacgtgagcggcggagacagtcgcg 33233273

                                                                            
Query: 183      ggtgcgtcgtctgggccgtggatctcatcgacatgcggcagtacccggaggtcgtgcagg 242
                |||||||| ||||| |||| ||| |  | |||||| || ||||  ||| |||||||||||
Sbjct: 33233274 ggtgcgtcttctggaccgtcgatttgctggacatgagggagtatacggtggtcgtgcagg 33233333

                                                          
Query: 243      atgtgtacatccgtctcgcgcagtccgaggtcgatgccttga 284
                || |||||||||| ||||| ||||||||| | || |||||||
Sbjct: 33233334 atctgtacatccgactcgctcagtccgagattgacgccttga 33233375



 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                         
Query: 428      gccggcggcgctcgggacgacgacg 452
                ||||||| |||||||||||||||||
Sbjct: 38606830 gccggcgccgctcgggacgacgacg 38606854



 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 419      acggcggcggccggcggcgc 438
                ||||||||||||||||||||
Sbjct: 39821522 acggcggcggccggcggcgc 39821503
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>dbj|AP003406.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:B1070A12
          Length = 148449

 Score =  258 bits (130), Expect = 2e-65
 Identities = 238/274 (86%)
 Strand = Plus / Plus

                                                                         
Query: 20    gccggagacgggttctggacagtgagccggatgaagctgccggaggcgaccagcgcgacg 79
             ||||| |||||||||||||| |||| | ||||||||||||||| |||||| | |||||||
Sbjct: 15195 gccggcgacgggttctggacggtgaacaggatgaagctgccggcggcgacgaacgcgacg 15254

                                                                         
Query: 80    gtgcacgccggcatgaccttggaccggtgcaggcagctgtgcctcggcaactgcagctgc 139
             ||| |||||||||||||  |||||| |||||||||| ||||||| |||||||||||||||
Sbjct: 15255 gtgtacgccggcatgacgctggaccagtgcaggcaggtgtgcctgggcaactgcagctgc 15314

                                                                         
Query: 140   ggggcgtacgccgcggcggacgtcagcgggggcatcaaccgcgggtgcgtcgtctgggcc 199
              ||||||||||||||||| |||  ||||| ||  ||| ||||||||||||| ||||||||
Sbjct: 15315 agggcgtacgccgcggcgaacgcaagcggcggggtcagccgcgggtgcgtcatctgggcc 15374

                                                                         
Query: 200   gtggatctcatcgacatgcggcagtacccggaggtcgtgcaggatgtgtacatccgtctc 259
             || |||||  | |||||| |||||||| | | ||||||||||||||| |||||||| |||
Sbjct: 15375 gtcgatctgctggacatgaggcagtactccggggtcgtgcaggatgtctacatccggctc 15434

                                               
Query: 260   gcgcagtccgaggtcgatgccttgaccgctgcag 293
             |||||||||||||| || ||||||| ||| ||||
Sbjct: 15435 gcgcagtccgaggtagacgccttgaacgccgcag 15468



 Score =  170 bits (86), Expect = 3e-39
 Identities = 233/282 (82%)
 Strand = Plus / Plus

                                                                         
Query: 3     ccaacctgagctgcggggccggagacgggttctggacagtgagccggatgaagctgccgg 62
             ||||||||| ||||||||  || || |||||||||   |||| | |||||||||||||||
Sbjct: 26341 ccaacctgacctgcggggatggcgatgggttctggcgggtgaacaggatgaagctgccgg 26400

                                                                         
Query: 63    aggcgaccagcgcgacggtgcacgccggcatgaccttggaccggtgcaggcagctgtgcc 122
             ||||||| |  |||||||||||||||||||||||  |||||| ||||||||||  |||||
Sbjct: 26401 aggcgacgaaggcgacggtgcacgccggcatgacgctggaccagtgcaggcaggcgtgcc 26460

                                                                         
Query: 123   tcggcaactgcagctgcggggcgtacgccgcggcggacgtcagcgggggcatcaaccgcg 182
             |  ||||||||||||||   ||||||||||||||| |||| ||||| ||   ||  ||||
Sbjct: 26461 tgcgcaactgcagctgcaacgcgtacgccgcggcgaacgtgagcggcggagacagtcgcg 26520

                                                                         
Query: 183   ggtgcgtcgtctgggccgtggatctcatcgacatgcggcagtacccggaggtcgtgcagg 242
             |||||||| ||||| |||| ||| |  | |||||| || ||||  ||| |||||||||||
Sbjct: 26521 ggtgcgtcttctggaccgtcgatttgctggacatgagggagtatacggtggtcgtgcagg 26580

                                                       
Query: 243   atgtgtacatccgtctcgcgcagtccgaggtcgatgccttga 284
             || |||||||||| ||||| ||||||||| | || |||||||
Sbjct: 26581 atctgtacatccgactcgctcagtccgagattgacgccttga 26622
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                          
Query: 132      gcagctgcggggcgtacgccgcggcg 157
                ||||||||| ||||||||||||||||
Sbjct: 21903587 gcagctgcgcggcgtacgccgcggcg 21903612
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                          
Query: 132      gcagctgcggggcgtacgccgcggcg 157
                ||||||||| ||||||||||||||||
Sbjct: 21831932 gcagctgcgcggcgtacgccgcggcg 21831957
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>emb|AL831807.7|CNS08CAK Oryza sativa chromosome 12, . BAC OSJNBa0062E22 of library OSJNBa
            from chromosome 12 of cultivar Nipponbare of ssp.
            japonica of Oryza sativa (rice), complete sequence
          Length = 138308

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 132  gcagctgcggggcgtacgccgcggcg 157
            ||||||||| ||||||||||||||||
Sbjct: 9715 gcagctgcgcggcgtacgccgcggcg 9740
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>emb|AL732647.4|CNS08C9M Oryza sativa chromosome 12, . BAC OSJNBb0087J18 of library OSJNBb from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 121592

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 132   gcagctgcggggcgtacgccgcggcg 157
             ||||||||| ||||||||||||||||
Sbjct: 19745 gcagctgcgcggcgtacgccgcggcg 19720
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>ref|NM_190200.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 768

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 428 gccggcggcgctcgggacgacgacg 452
           ||||||| |||||||||||||||||
Sbjct: 630 gccggcgccgctcgggacgacgacg 654
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>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome
          Length = 4403837

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 290     gcagctgaccggcgacgaagc 310
               |||||||||||||||||||||
Sbjct: 1427217 gcagctgaccggcgacgaagc 1427237
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>gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete genome
          Length = 3696649

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 392     ttctggagaaacagggcggct 412
               |||||||||||||||||||||
Sbjct: 1199249 ttctggagaaacagggcggct 1199269
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>emb|AL445586.6| Human DNA sequence from clone RP11-352F21 on chromosome 9, complete
             sequence
          Length = 198498

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 112   gcagctgtgcctcggcaactgcagctgcg 140
             ||||||||| || ||||||||||||||||
Sbjct: 13723 gcagctgtggctaggcaactgcagctgcg 13695
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>emb|BX842576.1| Mycobacterium tuberculosis H37Rv complete genome; segment 5/13
          Length = 348264

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 290   gcagctgaccggcgacgaagc 310
             |||||||||||||||||||||
Sbjct: 44688 gcagctgaccggcgacgaagc 44708
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>emb|BX248338.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 5/14
          Length = 299450

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 290    gcagctgaccggcgacgaagc 310
              |||||||||||||||||||||
Sbjct: 111277 gcagctgaccggcgacgaagc 111297
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>dbj|AP003346.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0434C04
          Length = 150064

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 428    gccggcggcgctcgggacgacgacg 452
              ||||||| |||||||||||||||||
Sbjct: 127511 gccggcgccgctcgggacgacgacg 127535
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>dbj|AP003431.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:B1099D03
          Length = 191022

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 428   gccggcggcgctcgggacgacgacg 452
             ||||||| |||||||||||||||||
Sbjct: 64803 gccggcgccgctcgggacgacgacg 64827
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>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 255     gtctcgcgcagtccgaggtcg 275
               |||||||||||||||||||||
Sbjct: 1276056 gtctcgcgcagtccgaggtcg 1276076
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>dbj|AK102902.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033113D13, full
            insert sequence
          Length = 1631

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 428  gccggcggcgctcgggacgacgacg 452
            ||||||| |||||||||||||||||
Sbjct: 1332 gccggcgccgctcgggacgacgacg 1356
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>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome
          Length = 4829781

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 291     cagctgaccggcgacgaagcc 311
               |||||||||||||||||||||
Sbjct: 2800583 cagctgaccggcgacgaagcc 2800563
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>ref|NM_189918.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1440

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 419 acggcggcggccggcggcgc 438
           ||||||||||||||||||||
Sbjct: 470 acggcggcggccggcggcgc 489
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>gb|AC159422.1| Trypanosoma brucei chromosome 5 clone RPCI93-26C7, complete sequence
          Length = 144928

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 376   cttttgctgtctctgtttct 395
             ||||||||||||||||||||
Sbjct: 90896 cttttgctgtctctgtttct 90915
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>ref|XM_478647.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2583

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 41/48 (85%)
 Strand = Plus / Plus

                                                            
Query: 118  gtgcctcggcaactgcagctgcggggcgtacgccgcggcggacgtcag 165
            |||||| | |||||||  ||||| ||||||||||||| | ||||||||
Sbjct: 1167 gtgcctggccaactgctcctgcgtggcgtacgccgcgtccgacgtcag 1214
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>gb|CP000068.1| Trypanosoma brucei chromosome 5, complete sequence
          Length = 1608198

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 376     cttttgctgtctctgtttct 395
               ||||||||||||||||||||
Sbjct: 1404496 cttttgctgtctctgtttct 1404515
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>ref|XM_869649.1| PREDICTED: Bos taurus similar to Placental thrombin inhibitor
           (Cytoplasmic antiproteinase) (CAP) (Protease inhibitor
           6) (PI-6) (Serpin B6) (LOC617396), mRNA
          Length = 639

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 90  gcatgaccttggaccggtgcaggc 113
           |||||||||||||| |||||||||
Sbjct: 460 gcatgaccttggacaggtgcaggc 437
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>ref|XM_381475.1| Gibberella zeae PH-1 chromosome 1 hypothetical protein (FG01299.1)
           partial mRNA
          Length = 1785

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 347 tccggcgtgcttcttcttggagcc 370
           ||||| ||||||||||||||||||
Sbjct: 918 tccggagtgcttcttcttggagcc 895
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>gb|AC116571.5| Mus musculus BAC clone RP23-97B18 from 6, complete sequence
          Length = 113258

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                             
Query: 406   ggcggctgctgaaacggcggcggccggcggcg 437
             |||||| ||||| ||||| |||||||||||||
Sbjct: 36597 ggcggcggctgagacggccgcggccggcggcg 36566
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>emb|AL353779.11| Human DNA sequence from clone RP1-43O17 on chromosome 1 Contains the
             LEP7 gene for late envelope protein 7, two small proline
             rich-like (epidermal differentiation complex) 1B (SPRL1B)
             pseudogenes, the gene for a novel protein, the LEP6 gene
             for late envelope protein 6, the LEP5 gene for late
             envelope protein 5, the LEP4 gene for late envelope
             protein 4 and the LEP3 gene for late envelope protein 3,
             complete sequence
          Length = 96013

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 354   tgcttcttcttggagcctttgcct 377
             ||||||||||||||| ||||||||
Sbjct: 74037 tgcttcttcttggagactttgcct 74014
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>gb|U32222.1|B1U32222 Bacteriophage 186, complete sequence
          Length = 30624

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 260   gcgcagtccgaggtcgatgc 279
             ||||||||||||||||||||
Sbjct: 16143 gcgcagtccgaggtcgatgc 16162
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>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome
          Length = 5513844

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 415     tgaaacggcggcggccggcg 434
               ||||||||||||||||||||
Sbjct: 3498951 tgaaacggcggcggccggcg 3498970
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>gb|CP000232.1| Moorella thermoacetica ATCC 39073, complete genome
          Length = 2628784

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 419     acggcggcggccggcggcgc 438
               ||||||||||||||||||||
Sbjct: 2494250 acggcggcggccggcggcgc 2494231
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>ref|XM_397589.2| PREDICTED: Apis mellifera similar to Adam-PA (LOC409796), mRNA
          Length = 886

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 355 gcttcttcttggagcctttg 374
           ||||||||||||||||||||
Sbjct: 427 gcttcttcttggagcctttg 408
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 41/48 (85%)
 Strand = Plus / Minus

                                                                
Query: 118      gtgcctcggcaactgcagctgcggggcgtacgccgcggcggacgtcag 165
                |||||| | |||||||  ||||| ||||||||||||| | ||||||||
Sbjct: 21796351 gtgcctggccaactgctcctgcgtggcgtacgccgcgtccgacgtcag 21796304
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 420      cggcggcggccggcggcgct 439
                ||||||||||||||||||||
Sbjct: 28866169 cggcggcggccggcggcgct 28866188
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>gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome
          Length = 3304561

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 293    gctgaccggcgacgaagcca 312
              ||||||||||||||||||||
Sbjct: 894803 gctgaccggcgacgaagcca 894784
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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 419     acggcggcggccggcggcgc 438
               ||||||||||||||||||||
Sbjct: 1286083 acggcggcggccggcggcgc 1286102
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>dbj|AP003433.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
            clone:P0004D12
          Length = 138136

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 419  acggcggcggccggcggcgc 438
            ||||||||||||||||||||
Sbjct: 2230 acggcggcggccggcggcgc 2211
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>dbj|AP003436.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0470A12
          Length = 185095

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 419    acggcggcggccggcggcgc 438
              ||||||||||||||||||||
Sbjct: 172421 acggcggcggccggcggcgc 172402
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>gb|AC138117.4| Mus musculus BAC clone RP24-146K16 from chromosome 6, complete sequence
          Length = 230020

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                              
Query: 406    ggcggctgctgaaacggcggcggccggcggcg 437
              |||||| ||||| ||||| |||||||||||||
Sbjct: 124831 ggcggcggctgagacggccgcggccggcggcg 124800
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>dbj|AP004401.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
              clone:P0534A03
          Length = 153170

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 41/48 (85%)
 Strand = Plus / Minus

                                                              
Query: 118    gtgcctcggcaactgcagctgcggggcgtacgccgcggcggacgtcag 165
              |||||| | |||||||  ||||| ||||||||||||| | ||||||||
Sbjct: 113534 gtgcctggccaactgctcctgcgtggcgtacgccgcgtccgacgtcag 113487
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>dbj|AP004278.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0468G03
          Length = 143918

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 420   cggcggcggccggcggcgct 439
             ||||||||||||||||||||
Sbjct: 16213 cggcggcggccggcggcgct 16232
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>ref|NM_174789.1| Bos taurus serine (or cysteine) proteinase inhibitor, clade B
            (ovalbumin), member 6 (SERPINB6), mRNA
          Length = 1327

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 90   gcatgaccttggaccggtgcaggc 113
            |||||||||||||| |||||||||
Sbjct: 1034 gcatgaccttggacaggtgcaggc 1011
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>dbj|AK110828.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-171-H11, full
           insert sequence
          Length = 1662

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 419 acggcggcggccggcggcgc 438
           ||||||||||||||||||||
Sbjct: 194 acggcggcggccggcggcgc 213
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>dbj|AP005126.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OSJNBb0041B22
          Length = 142446

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 41/48 (85%)
 Strand = Plus / Minus

                                                             
Query: 118   gtgcctcggcaactgcagctgcggggcgtacgccgcggcggacgtcag 165
             |||||| | |||||||  ||||| ||||||||||||| | ||||||||
Sbjct: 10027 gtgcctggccaactgctcctgcgtggcgtacgccgcgtccgacgtcag 9980
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>dbj|D55670.1| Bos taurus mRNA for thrombin inhibitor, complete cds
          Length = 1327

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 90   gcatgaccttggaccggtgcaggc 113
            |||||||||||||| |||||||||
Sbjct: 1034 gcatgaccttggacaggtgcaggc 1011


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,754,846
Number of Sequences: 3902068
Number of extensions: 3754846
Number of successful extensions: 82869
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 44
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 81279
Number of HSP's gapped (non-prelim): 1588
length of query: 541
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 518
effective length of database: 17,143,297,704
effective search space: 8880228210672
effective search space used: 8880228210672
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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