ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal8o19
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1gb|AF320254.1|AF320254 Azoarcus evansii aerobic 2-aminobenzoate ... 46 0.11
2ref|XM_364934.1| Magnaporthe grisea 70-15 hypothetical protein (... 44 0.45
3ref|XM_509099.1| PREDICTED: Pan troglodytes similar to mitogen-a... 42 1.8
4ref|XM_517879.1| PREDICTED: Pan troglodytes similar to Colorecta... 42 1.8
5ref|XM_581714.2| PREDICTED: Bos taurus similar to mitogen-activa... 42 1.8
6ref|XM_866211.1| PREDICTED: Bos taurus similar to mitogen-activa... 42 1.8
7ref|NM_002387.1| Homo sapiens mutated in colorectal cancers (MCC... 42 1.8
8ref|XM_852089.1| PREDICTED: Canis familiaris similar to Mitogen-... 42 1.8
9ref|XM_843722.1| PREDICTED: Canis familiaris similar to Mitogen-... 42 1.8
10emb|AL121956.21|HSDJ655C5 Human DNA sequence from clone RP4-655C... 42 1.8
11gb|BC037585.1| Homo sapiens, clone IMAGE:5532846, mRNA 42 1.8
12gb|BC050050.1| Homo sapiens mitogen-activated protein kinase kin... 42 1.8
13emb|CR858343.1| Pongo pygmaeus mRNA; cDNA DKFZp459K2433 (from cl... 42 1.8
14emb|CR857069.1| Pongo pygmaeus mRNA; cDNA DKFZp469F0810 (from cl... 42 1.8
15dbj|AK128596.1| Homo sapiens cDNA FLJ46755 fis, clone TRACH30233... 42 1.8
16dbj|AK094195.1| Homo sapiens cDNA FLJ36876 fis, clone ASTRO20191... 42 1.8
17dbj|AK096212.1| Homo sapiens cDNA FLJ38893 fis, clone NOVAR10000... 42 1.8
18gb|AC106750.3| Homo sapiens chromosome 5 clone RP11-164A4, compl... 42 1.8
19gb|AY893050.1| Synthetic construct Homo sapiens clone FLH135307.... 42 1.8
20emb|BX647710.1|HSM807856 Homo sapiens mRNA; cDNA DKFZp686B1231 (... 42 1.8
21gb|BC009279.2| Homo sapiens mutated in colorectal cancers, mRNA ... 42 1.8
22ref|NM_175922.3| Homo sapiens hypothetical protein MGC35308 (MGC... 42 1.8
23ref|NM_006301.2| Homo sapiens mitogen-activated protein kinase k... 42 1.8
24emb|BX537952.1|HSM806078 Homo sapiens mRNA; cDNA DKFZp686J1286 (... 42 1.8
25gb|BC018919.2| Homo sapiens mutated in colorectal cancers, mRNA ... 42 1.8
26gb|BC034775.1| Homo sapiens hypothetical protein MGC35308, mRNA ... 42 1.8
27gb|U07358.1|HSU07358 Human protein kinase (zpk) mRNA, complete cds 42 1.8
28gb|M62397.1|HUMCRCMUT Human colorectal mutant cancer protein mRN... 42 1.8
29gb|AC130604.4| Oryza sativa (japonica cultivar-group) chromosome... 40 7.0
30gb|AC147706.3| Felis catus clone RP86-363G23, complete sequence 40 7.0
31gb|AY566805.1| Zostera noltii clone ZnF11 microsatellite sequence 40 7.0
32gb|AC008139.9| Drosophila melanogaster clone BACR28B01, complete... 40 7.0
33gb|AC132490.2| Oryza sativa (japonica cultivar-group) chromosome... 40 7.0
34ref|XM_755756.1| Ustilago maydis 521 hypothetical protein (UM047... 40 7.0
35ref|XM_757303.1| Ustilago maydis 521 hypothetical protein (UM062... 40 7.0
36emb|BX004881.17| Zebrafish DNA sequence from clone CH211-141M16 ... 40 7.0
37gb|BT010033.1| Drosophila melanogaster LP05937 full insert cDNA 40 7.0
38emb|BX027377.1|CNS08TAD Single read from an extremity of a full-... 40 7.0
39emb|BX572604.1| Rhodopseudomonas palustris CGA009 complete genom... 40 7.0
40emb|AL939111.1|SCO939111 Streptomyces coelicolor A3(2) complete ... 40 7.0
41ref|NM_206469.1| Drosophila melanogaster CG11870-RD, transcript ... 40 7.0
42ref|NM_169337.2| Drosophila melanogaster CG11870-RB, transcript ... 40 7.0
43gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome 40 7.0
44dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.0
45dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.0
46dbj|AP005819.2| Oryza sativa (japonica cultivar-group) genomic D... 40 7.0
47emb|CR556724.7| Zebrafish DNA sequence from clone DKEYP-34A8 in ... 40 7.0
48dbj|AK061379.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 7.0
49gb|AE003686.4| Drosophila melanogaster chromosome 3R, section 24... 40 7.0
50gb|AC130720.3| Mus musculus BAC clone RP24-292B4 from chromosome... 40 7.0
51dbj|AP004547.1| Lotus japonicus genomic DNA, chromosome 6, clone... 40 7.0
52gb|AC170917.2| Mus musculus BAC clone RP23-160F6 from chromosome... 40 7.0

>gb|AF320254.1|AF320254 Azoarcus evansii aerobic 2-aminobenzoate metabolism type II operon,
            complete sequence
          Length = 11010

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                   
Query: 154  ccgccaccgcccgcccctcgacc 176
            |||||||||||||||||||||||
Sbjct: 6366 ccgccaccgcccgcccctcgacc 6388



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>ref|XM_364934.1| Magnaporthe grisea 70-15 hypothetical protein (MG09779.4) partial
           mRNA
          Length = 1422

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 468 cgagcacaagcagcagcagcaa 489
           ||||||||||||||||||||||
Sbjct: 656 cgagcacaagcagcagcagcaa 677



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>ref|XM_509099.1| PREDICTED: Pan troglodytes similar to mitogen-activated protein
           kinase kinase kinase 12; leucine zipper protein kinase;
           zipper protein kinase; protein kinase MUK; dual leucine
           zipper kinase DLK (LOC451940), mRNA
          Length = 3042

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 469 gagcacaagcagcagcagcaagacc 493
           |||||||||||||||||| ||||||
Sbjct: 424 gagcacaagcagcagcaggaagacc 448



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>ref|XM_517879.1| PREDICTED: Pan troglodytes similar to Colorectal mutant cancer
           protein (MCC protein) (LOC462002), mRNA
          Length = 3485

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 469 gagcacaagcagcagcagcaa 489
           |||||||||||||||||||||
Sbjct: 186 gagcacaagcagcagcagcaa 206



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>ref|XM_581714.2| PREDICTED: Bos taurus similar to mitogen-activated protein kinase
           kinase kinase 12, transcript variant 1 (LOC505427), mRNA
          Length = 3225

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 469 gagcacaagcagcagcagcaagacc 493
           |||||||||||||||||| ||||||
Sbjct: 325 gagcacaagcagcagcaggaagacc 349



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>ref|XM_866211.1| PREDICTED: Bos taurus similar to mitogen-activated protein kinase
           kinase kinase 12, transcript variant 2 (LOC505427), mRNA
          Length = 3357

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 469 gagcacaagcagcagcagcaagacc 493
           |||||||||||||||||| ||||||
Sbjct: 457 gagcacaagcagcagcaggaagacc 481



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>ref|NM_002387.1| Homo sapiens mutated in colorectal cancers (MCC), mRNA
          Length = 4181

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 469  gagcacaagcagcagcagcaa 489
            |||||||||||||||||||||
Sbjct: 1156 gagcacaagcagcagcagcaa 1176



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>ref|XM_852089.1| PREDICTED: Canis familiaris similar to Mitogen-activated protein
           kinase kinase kinase 12 (Mixed lineage kinase)
           (Leucine-zipper protein kinase) (ZPK) (Dual leucine
           zipper bearing kinase) (DLK) (MAPK-upstream kinase)
           (MUK), transcript variant 3 (LOC607170), mRNA
          Length = 2583

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 469 gagcacaagcagcagcagcaagacc 493
           |||||||||||||||||| ||||||
Sbjct: 325 gagcacaagcagcagcaggaagacc 349



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>ref|XM_843722.1| PREDICTED: Canis familiaris similar to Mitogen-activated protein
           kinase kinase kinase 12 (Mixed lineage kinase)
           (Leucine-zipper protein kinase) (ZPK) (Dual leucine
           zipper bearing kinase) (DLK) (MAPK-upstream kinase)
           (MUK), transcript variant 2 (LOC607170), mRNA
          Length = 2682

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 469 gagcacaagcagcagcagcaagacc 493
           |||||||||||||||||| ||||||
Sbjct: 424 gagcacaagcagcagcaggaagacc 448



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>emb|AL121956.21|HSDJ655C5 Human DNA sequence from clone RP4-655C5 on chromosome 6 Contains a
             pseudogene similar to heterogeneous nuclear
             ribonuclearprotein A, novel protein similar to RIKEN cDNA
             5630401J11 (pRGR1) (MGC19825), a guanine nucleotide
             binding protein (G protein), gamma 5 pseudogene (GCG5), a
             novel gene and 3 CpG islands, complete sequence
          Length = 119733

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 146   cgcccatgccgccaccgcccgcccc 170
             ||||||||||||| |||||||||||
Sbjct: 32181 cgcccatgccgccgccgcccgcccc 32205



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>gb|BC037585.1| Homo sapiens, clone IMAGE:5532846, mRNA
          Length = 1623

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 469  gagcacaagcagcagcagcaagacc 493
            |||||||||||||||||| ||||||
Sbjct: 1151 gagcacaagcagcagcaggaagacc 1127



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>gb|BC050050.1| Homo sapiens mitogen-activated protein kinase kinase kinase 12,
           mRNA (cDNA clone MGC:42552 IMAGE:4824512), complete cds
          Length = 2536

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 469 gagcacaagcagcagcagcaagacc 493
           |||||||||||||||||| ||||||
Sbjct: 696 gagcacaagcagcagcaggaagacc 720



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>emb|CR858343.1| Pongo pygmaeus mRNA; cDNA DKFZp459K2433 (from clone DKFZp459K2433)
          Length = 2977

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 469 gagcacaagcagcagcagcaagacc 493
           |||||||||||||||||| ||||||
Sbjct: 645 gagcacaagcagcagcaggaagacc 669



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>emb|CR857069.1| Pongo pygmaeus mRNA; cDNA DKFZp469F0810 (from clone DKFZp469F0810)
          Length = 4748

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 469  gagcacaagcagcagcagcaa 489
            |||||||||||||||||||||
Sbjct: 1120 gagcacaagcagcagcagcaa 1140



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>dbj|AK128596.1| Homo sapiens cDNA FLJ46755 fis, clone TRACH3023373, highly  similar
            to Colorectal mutant cancer protein
          Length = 3334

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 469  gagcacaagcagcagcagcaa 489
            |||||||||||||||||||||
Sbjct: 1934 gagcacaagcagcagcagcaa 1954



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>dbj|AK094195.1| Homo sapiens cDNA FLJ36876 fis, clone ASTRO2019171, highly similar
           to Mitogen-activated protein kinase kinase kinase 12
          Length = 2807

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 469 gagcacaagcagcagcagcaagacc 493
           |||||||||||||||||| ||||||
Sbjct: 491 gagcacaagcagcagcaggaagacc 515



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>dbj|AK096212.1| Homo sapiens cDNA FLJ38893 fis, clone NOVAR1000091, highly similar to
            COLORECTAL MUTANT CANCER PROTEIN
          Length = 1587

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 469  gagcacaagcagcagcagcaa 489
            |||||||||||||||||||||
Sbjct: 1068 gagcacaagcagcagcagcaa 1088



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>gb|AC106750.3| Homo sapiens chromosome 5 clone RP11-164A4, complete sequence
          Length = 101224

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 469   gagcacaagcagcagcagcaa 489
             |||||||||||||||||||||
Sbjct: 51173 gagcacaagcagcagcagcaa 51153



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>gb|AY893050.1| Synthetic construct Homo sapiens clone FLH135307.01L mutated in
           colorectal cancers (MCC) mRNA, partial cds
          Length = 2490

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 469 gagcacaagcagcagcagcaa 489
           |||||||||||||||||||||
Sbjct: 936 gagcacaagcagcagcagcaa 956



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>emb|BX647710.1|HSM807856 Homo sapiens mRNA; cDNA DKFZp686B1231 (from clone DKFZp686B1231)
          Length = 5880

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 469  gagcacaagcagcagcagcaa 489
            |||||||||||||||||||||
Sbjct: 1396 gagcacaagcagcagcagcaa 1416



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>gb|BC009279.2| Homo sapiens mutated in colorectal cancers, mRNA (cDNA clone
            MGC:12731 IMAGE:4111706), complete cds
          Length = 3431

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 469  gagcacaagcagcagcagcaa 489
            |||||||||||||||||||||
Sbjct: 1466 gagcacaagcagcagcagcaa 1486



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>ref|NM_175922.3| Homo sapiens hypothetical protein MGC35308 (MGC35308), mRNA
          Length = 2704

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 146 cgcccatgccgccaccgcccgcccc 170
           ||||||||||||| |||||||||||
Sbjct: 252 cgcccatgccgccgccgcccgcccc 276



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>ref|NM_006301.2| Homo sapiens mitogen-activated protein kinase kinase kinase 12
           (MAP3K12), mRNA
          Length = 3365

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 469 gagcacaagcagcagcagcaagacc 493
           |||||||||||||||||| ||||||
Sbjct: 423 gagcacaagcagcagcaggaagacc 447



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>emb|BX537952.1|HSM806078 Homo sapiens mRNA; cDNA DKFZp686J1286 (from clone DKFZp686J1286)
          Length = 7707

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 469 gagcacaagcagcagcagcaa 489
           |||||||||||||||||||||
Sbjct: 937 gagcacaagcagcagcagcaa 957



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>gb|BC018919.2| Homo sapiens mutated in colorectal cancers, mRNA (cDNA clone
            MGC:12732 IMAGE:4131685), complete cds
          Length = 3484

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 469  gagcacaagcagcagcagcaa 489
            |||||||||||||||||||||
Sbjct: 1466 gagcacaagcagcagcagcaa 1486



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>gb|BC034775.1| Homo sapiens hypothetical protein MGC35308, mRNA (cDNA clone
           MGC:35308 IMAGE:5177440), complete cds
          Length = 2174

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 146 cgcccatgccgccaccgcccgcccc 170
           ||||||||||||| |||||||||||
Sbjct: 252 cgcccatgccgccgccgcccgcccc 276



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>gb|U07358.1|HSU07358 Human protein kinase (zpk) mRNA, complete cds
          Length = 3365

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 469 gagcacaagcagcagcagcaagacc 493
           |||||||||||||||||| ||||||
Sbjct: 423 gagcacaagcagcagcaggaagacc 447



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>gb|M62397.1|HUMCRCMUT Human colorectal mutant cancer protein mRNA, complete cds
          Length = 4181

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 469  gagcacaagcagcagcagcaa 489
            |||||||||||||||||||||
Sbjct: 1156 gagcacaagcagcagcagcaa 1176



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>gb|AC130604.4| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1155G07,
             complete sequence
          Length = 146712

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 470   agcacaagcagcagcagcaa 489
             ||||||||||||||||||||
Sbjct: 94984 agcacaagcagcagcagcaa 94965



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>gb|AC147706.3| Felis catus clone RP86-363G23, complete sequence
          Length = 142721

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 417   cagcaaggaagaggactggc 436
             ||||||||||||||||||||
Sbjct: 23630 cagcaaggaagaggactggc 23611



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>gb|AY566805.1| Zostera noltii clone ZnF11 microsatellite sequence
          Length = 274

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 469 gagcacaagcagcagcagca 488
           ||||||||||||||||||||
Sbjct: 203 gagcacaagcagcagcagca 184



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>gb|AC008139.9| Drosophila melanogaster clone BACR28B01, complete sequence
          Length = 170675

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 470    agcacaagcagcagcagcaa 489
              ||||||||||||||||||||
Sbjct: 135870 agcacaagcagcagcagcaa 135889



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>gb|AC132490.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0570A02,
              complete sequence
          Length = 146541

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 412    ggcggcagcaaggaagagga 431
              ||||||||||||||||||||
Sbjct: 119037 ggcggcagcaaggaagagga 119018



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>ref|XM_755756.1| Ustilago maydis 521 hypothetical protein (UM04702.1) partial mRNA
          Length = 855

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 469 gagcacaagcagcagcagca 488
           ||||||||||||||||||||
Sbjct: 668 gagcacaagcagcagcagca 687



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>ref|XM_757303.1| Ustilago maydis 521 hypothetical protein (UM06249.1) partial mRNA
          Length = 6600

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 470  agcacaagcagcagcagcaa 489
            ||||||||||||||||||||
Sbjct: 4635 agcacaagcagcagcagcaa 4616



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>emb|BX004881.17| Zebrafish DNA sequence from clone CH211-141M16 in linkage group 13,
             complete sequence
          Length = 189908

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 465   ggacgagcacaagcagcagc 484
             ||||||||||||||||||||
Sbjct: 65692 ggacgagcacaagcagcagc 65711



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>gb|BT010033.1| Drosophila melanogaster LP05937 full insert cDNA
          Length = 4365

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 470 agcacaagcagcagcagcaa 489
           ||||||||||||||||||||
Sbjct: 464 agcacaagcagcagcagcaa 483



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>emb|BX027377.1|CNS08TAD Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 3-PRIME end of
           clone FK0AAA41AA07 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 970

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 470 agcacaagcagcagcagcaa 489
           ||||||||||||||||||||
Sbjct: 232 agcacaagcagcagcagcaa 213



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>emb|BX572604.1| Rhodopseudomonas palustris CGA009 complete genome; segment 12/16
          Length = 348068

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 155   cgccaccgcccgcccctcga 174
             ||||||||||||||||||||
Sbjct: 58617 cgccaccgcccgcccctcga 58636



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>emb|AL939111.1|SCO939111 Streptomyces coelicolor A3(2) complete genome; segment 8/29
          Length = 321250

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 153   gccgccaccgcccgcccctc 172
             ||||||||||||||||||||
Sbjct: 15397 gccgccaccgcccgcccctc 15378



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>ref|NM_206469.1| Drosophila melanogaster CG11870-RD, transcript variant D (CG11870),
           mRNA
          Length = 4357

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 470 agcacaagcagcagcagcaa 489
           ||||||||||||||||||||
Sbjct: 464 agcacaagcagcagcagcaa 483



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>ref|NM_169337.2| Drosophila melanogaster CG11870-RB, transcript variant B (CG11870),
           mRNA
          Length = 5076

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 470 agcacaagcagcagcagcaa 489
           ||||||||||||||||||||
Sbjct: 464 agcacaagcagcagcagcaa 483



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>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome
          Length = 5331656

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 293     gcgccggtcaagctggcgcggacg 316
               ||||||| ||||||||||||||||
Sbjct: 2430488 gcgccggccaagctggcgcggacg 2430511



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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 412      ggcggcagcaaggaagagga 431
                ||||||||||||||||||||
Sbjct: 12163668 ggcggcagcaaggaagagga 12163649



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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 470      agcacaagcagcagcagcaa 489
                ||||||||||||||||||||
Sbjct: 25232143 agcacaagcagcagcagcaa 25232124



 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 412      ggcggcagcaaggaagagga 431
                ||||||||||||||||||||
Sbjct: 14038960 ggcggcagcaaggaagagga 14038941



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>dbj|AP005819.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OSJNBa0063H21
          Length = 188058

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 412   ggcggcagcaaggaagagga 431
             ||||||||||||||||||||
Sbjct: 37160 ggcggcagcaaggaagagga 37141



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>emb|CR556724.7| Zebrafish DNA sequence from clone DKEYP-34A8 in linkage group 13,
             complete sequence
          Length = 42660

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 465   ggacgagcacaagcagcagc 484
             ||||||||||||||||||||
Sbjct: 17037 ggacgagcacaagcagcagc 17018



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>dbj|AK061379.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-304-G12, full
           insert sequence
          Length = 1181

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 412 ggcggcagcaaggaagagga 431
           ||||||||||||||||||||
Sbjct: 44  ggcggcagcaaggaagagga 25



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>gb|AE003686.4| Drosophila melanogaster chromosome 3R, section 24 of 118 of the complete
              sequence
          Length = 223505

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 470    agcacaagcagcagcagcaa 489
              ||||||||||||||||||||
Sbjct: 103406 agcacaagcagcagcagcaa 103425



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>gb|AC130720.3| Mus musculus BAC clone RP24-292B4 from chromosome 1, complete sequence
          Length = 176143

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 415   ggcagcaaggaagaggactg 434
             ||||||||||||||||||||
Sbjct: 57746 ggcagcaaggaagaggactg 57727



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>dbj|AP004547.1| Lotus japonicus genomic DNA, chromosome 6, clone:LjT31L24, TM0228a,
             complete sequence
          Length = 65103

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 344   tcggaaacggcgccgtagag 363
             ||||||||||||||||||||
Sbjct: 42965 tcggaaacggcgccgtagag 42946



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>gb|AC170917.2| Mus musculus BAC clone RP23-160F6 from chromosome 1, complete sequence
          Length = 195784

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 415   ggcagcaaggaagaggactg 434
             ||||||||||||||||||||
Sbjct: 91498 ggcagcaaggaagaggactg 91479


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,576,783
Number of Sequences: 3902068
Number of extensions: 3576783
Number of successful extensions: 101094
Number of sequences better than 10.0: 52
Number of HSP's better than 10.0 without gapping: 53
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 100840
Number of HSP's gapped (non-prelim): 254
length of query: 516
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 493
effective length of database: 17,143,297,704
effective search space: 8451645768072
effective search space used: 8451645768072
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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