Clone Information

BLAST Search Result

Clone Name	baal8o03
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	RAD50_PYRFU (P58301) DNA double-strand break repair rad50 ATPase	40	0.006
2	MYPT1_HUMAN (O14974) Protein phosphatase 1 regulatory subunit 12...	37	0.037
3	REN3B_HUMAN (Q9BZI7) Regulator of nonsense transcripts 3B (Nonse...	36	0.063
4	MYPT1_RAT (Q10728) Protein phosphatase 1 regulatory subunit 12A ...	36	0.063
5	MYO1_CAEEL (P02567) Myosin-1 (Myosin heavy chain D) (MHC D)	36	0.063
6	Y1739_STRPN (P67282) UPF0144 protein SP1739	36	0.083
7	Y1584_STRR6 (P67283) UPF0144 protein spr1584	36	0.083
8	USO1_YEAST (P25386) Intracellular protein transport protein USO1...	35	0.14
9	SAP1_SCHPO (P40847) Switch-activating protein 1	35	0.14
10	CHM2B_BRARE (Q6NXD2) Charged multivesicular body protein 2b (Chr...	34	0.24
11	SPC97_YEAST (P38863) Spindle pole body component SPC97	33	0.41
12	CING_MOUSE (P59242) Cingulin	33	0.41
13	Y1505_METJA (Q58900) Putative ATP-dependent RNA helicase MJ1505 ...	33	0.41
14	HEM1_METMP (Q6M130) Glutamyl-tRNA reductase (EC 1.2.1.70) (GluTR)	33	0.41
15	UPF3_YEAST (P48412) Nonsense-mediated mRNA decay protein 3 (Up-f...	33	0.54
16	CENPE_HUMAN (Q02224) Centromeric protein E (CENP-E protein)	33	0.54
17	MPP10_HUMAN (O00566) U3 small nucleolar ribonucleoprotein protei...	33	0.54
18	PCLO_MOUSE (Q9QYX7) Protein piccolo (Aczonin) (Multidomain presy...	33	0.70
19	PCLO_RAT (Q9JKS6) Protein piccolo (Aczonin) (Multidomain presyna...	33	0.70
20	TF3B_MOUSE (Q8CFK2) Transcription factor IIIB 90 kDa subunit (TF...	33	0.70
21	KPC1_YEAST (P24583) Protein kinase C-like 1 (EC 2.7.11.13) (PKC 1)	33	0.70
22	TF3B_HUMAN (Q92994) Transcription factor IIIB 90 kDa subunit (TF...	33	0.70
23	TIG_OCEIH (Q8CXB7) Trigger factor (TF)	32	0.92
24	PCLO_HUMAN (Q9Y6V0) Protein piccolo (Aczonin)	32	0.92
25	K2C4_MOUSE (P07744) Keratin, type II cytoskeletal 4 (Cytokeratin...	32	0.92
26	CING_HUMAN (Q9P2M7) Cingulin	32	0.92
27	MYH7_PIG (P79293) Myosin heavy chain, cardiac muscle beta isofor...	32	0.92
28	PRIL_METBF (Q46E38) Probable DNA primase large subunit (EC 2.7.7.-)	32	1.2
29	YR445_MIMIV (Q5UQP3) DnaJ-like protein R445	32	1.2
30	DDX23_HUMAN (Q9BUQ8) Probable ATP-dependent RNA helicase DDX23 (...	32	1.6
31	RAD50_METMA (Q8PUY4) DNA double-strand break repair rad50 ATPase	32	1.6
32	RNF17_HUMAN (Q9BXT8) RING finger protein 17	32	1.6
33	FAR10_YEAST (Q06001) Factor arrest protein 10	32	1.6
34	MYH10_HUMAN (P35580) Myosin-10 (Myosin heavy chain, nonmuscle II...	32	1.6
35	ACCA_MANSM (Q65UI5) Acetyl-coenzyme A carboxylase carboxyl trans...	31	2.0
36	LMO7_HUMAN (Q8WWI1) LIM domain only protein 7 (LOMP) (F-box only...	31	2.0
37	FRPA_NEIMB (Q9K0K9) Iron-regulated protein frpA	31	2.0
38	MYH8_HUMAN (P13535) Myosin-8 (Myosin heavy chain, skeletal muscl...	31	2.0
39	DREB_RAT (Q07266) Drebrin (Developmentally-regulated brain protein)	31	2.0
40	DREB_MOUSE (Q9QXS6) Drebrin (Developmentally-regulated brain pro...	31	2.0
41	MX2_HUMAN (P20592) Interferon-induced GTP-binding protein Mx2 (I...	31	2.7
42	CCD37_HUMAN (Q494V2) Coiled-coil domain-containing protein 37	31	2.7
43	DREB_HUMAN (Q16643) Drebrin (Developmentally-regulated brain pro...	31	2.7
44	MYT1L_HUMAN (Q9UL68) Myelin transcription factor 1-like protein ...	31	2.7
45	MYH8_MOUSE (P13542) Myosin-8 (Myosin heavy chain, skeletal muscl...	31	2.7
46	SOJO_XENLA (Q9PW73) Cytoskeletal protein Sojo (p170)	31	2.7
47	KCC4_MOUSE (P08414) Calcium/calmodulin-dependent protein kinase ...	31	2.7
48	SYCP1_MOUSE (Q62209) Synaptonemal complex protein 1 (SCP-1)	30	3.5
49	RPOD_HELPJ (Q9ZMY3) RNA polymerase sigma factor rpoD (Sigma-70)	30	3.5
50	PCNT_HUMAN (O95613) Pericentrin (Pericentrin B) (Kendrin)	30	3.5
51	MYH7_HUMAN (P12883) Myosin heavy chain, cardiac muscle beta isof...	30	3.5
52	BFSP1_HUMAN (Q12934) Filensin (Beaded filament structural protei...	30	3.5
53	RPOD_HELPY (P55993) RNA polymerase sigma factor rpoD (Sigma-70)	30	4.5
54	MYH7_MESAU (P13540) Myosin heavy chain, cardiac muscle beta isof...	30	4.5
55	FRPA_NEIMC (P55126) Iron-regulated protein frpA	30	4.5
56	K2C4_RAT (Q6IG00) Keratin, type II cytoskeletal 4 (Cytokeratin-4...	30	4.5
57	FRPC_NEIMC (P55127) Iron-regulated protein frpC	30	4.5
58	FRPC_NEIMB (Q9JYV5) Iron-regulated protein frpC	30	4.5
59	DDX23_PONPY (Q5RC67) Probable ATP-dependent RNA helicase DDX23 (...	30	4.5
60	CASP8_MOUSE (O89110) Caspase-8 precursor (EC 3.4.22.-) (CASP-8) ...	30	4.5
61	TIG_BACHD (Q9K8F3) Trigger factor (TF)	30	4.5
62	RPOC_XANC5 (Q3BWZ0) DNA-directed RNA polymerase beta' chain (EC ...	30	4.5
63	RPOC_XANAC (Q8PNS9) DNA-directed RNA polymerase beta' chain (EC ...	30	4.5
64	DOCK1_MOUSE (Q8BUR4) Dedicator of cytokinesis protein 1 (180 kDa...	30	4.5
65	MYH10_MOUSE (Q61879) Myosin-10 (Myosin heavy chain, nonmuscle II...	30	4.5
66	MYH7_RAT (P02564) Myosin heavy chain, cardiac muscle beta isofor...	30	4.5
67	TRIPB_HUMAN (Q15643) Thyroid receptor-interacting protein 11 (TR...	30	4.5
68	RPOC_XANOR (Q8KTH8) DNA-directed RNA polymerase beta' chain (EC ...	30	4.5
69	RPOC_XANCP (Q8PC55) DNA-directed RNA polymerase beta' chain (EC ...	30	4.5
70	RPOC_XANC8 (Q4URD3) DNA-directed RNA polymerase beta' chain (EC ...	30	4.5
71	TCF8_HUMAN (P37275) Transcription factor 8 (NIL-2-A zinc finger ...	30	5.9
72	SMI2_DEBHA (Q6BJY4) KNR4/SMI1 homolog 2	30	5.9
73	SMC2_HUMAN (O95347) Structural maintenance of chromosome 2-like ...	30	5.9
74	TIG_STAES (Q8CNY4) Trigger factor (TF)	30	5.9
75	TIG_STAEQ (Q5HNM8) Trigger factor (TF)	30	5.9
76	PCLO_CHICK (Q9PU36) Protein piccolo (Aczonin) (Fragment)	30	5.9
77	TACC3_HUMAN (Q9Y6A5) Transforming acidic coiled-coil-containing ...	30	5.9
78	MYH10_RAT (Q9JLT0) Myosin-10 (Myosin heavy chain, nonmuscle IIb)...	30	5.9
79	IF2P_PYRAB (Q9UZK7) Probable translation initiation factor IF-2 ...	30	5.9
80	DMD_PIG (Q5GN48) Dystrophin	30	5.9
81	Y164_METJA (Q57628) Hypothetical protein MJ0164	30	5.9
82	Y111_ENCCU (Q8STB5) Hypothetical protein ECU01_0110/ECU01_1500/E...	30	5.9
83	GIDA_BACHK (Q6HAF3) tRNA uridine 5-carboxymethylaminomethyl modi...	30	5.9
84	GIDA_BACAN (Q81JH3) tRNA uridine 5-carboxymethylaminomethyl modi...	30	5.9
85	DOCK1_HUMAN (Q14185) Dedicator of cytokinesis protein 1 (180 kDa...	30	5.9
86	DMD_CANFA (O97592) Dystrophin	30	5.9
87	RAD50_MOUSE (P70388) DNA repair protein RAD50 (EC 3.6.-.-) (mRad50)	29	7.8
88	K0494_HUMAN (O75071) Protein KIAA0494	29	7.8
89	HTPG_IDILO (Q5QWR2) Chaperone protein htpG (Heat shock protein h...	29	7.8
90	PGK_ANASP (Q8YPR1) Phosphoglycerate kinase (EC 2.7.2.3)	29	7.8
91	TOP2M_CAEEL (P34534) Putative DNA topoisomerase II, mitochondria...	29	7.8
92	CCD37_MACFA (Q4R8V8) Coiled-coil domain-containing protein 37	29	7.8
93	YJY1_SCHPO (Q9USN8) Hypothetical protein C132.01c in chromosome III	29	7.8
94	DMD_HUMAN (P11532) Dystrophin	29	7.8
95	MYH10_BOVIN (Q27991) Myosin-10 (Myosin heavy chain, nonmuscle II...	29	7.8
96	KCC4_RAT (P13234) Calcium/calmodulin-dependent protein kinase ty...	29	7.8
97	RBP2_HUMAN (P49792) Ran-binding protein 2 (RanBP2) (Nuclear pore...	29	7.8
98	DNLI_YEAST (P04819) DNA ligase I, mitochondrial precursor (EC 6....	29	7.8

>RAD50_PYRFU (P58301) DNA double-strand break repair rad50 ATPase|
          Length = 882

 Score = 39.7 bits (91), Expect = 0.006
 Identities = 37/141 (26%), Positives = 67/141 (47%), Gaps = 14/141 (9%)
 Frame = +1

Query: 172 EVLAKIAMLQTQKVRITNFLDERSAYLTKFTKDADTEFDMIGQNAMKELD---QIGDQIM 342
           E L K+A L+ +   + +   E    L K  K+ +T+ +  G  ++++LD   +  ++I 
Sbjct: 549 EDLKKLAPLEKKLAALIHKKQE----LEKELKELNTKLESFGFKSVEDLDSKLRELEEIY 604

Query: 343 ERLDSKMQSYEETAEMQRQEIEMNERVLEDFEDWIEEEKNEGMFFKSLGKVKKPQNNEEI 522
           +R  + + S +E    QR+  +  E +   FE+  E E +     K L ++K+  N EE 
Sbjct: 605 KRYLTLLNSKKELEITQREIAKAKETLEMSFEELAEVEADIERIEKKLSQLKQKYNEEEY 664

Query: 523 KVK-----------AKIEAQK 552
           K K           A++EAQK
Sbjct: 665 KKKREEKEELEKELARLEAQK 685

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>MYPT1_HUMAN (O14974) Protein phosphatase 1 regulatory subunit 12A (Myosin|
            phosphatase-targeting subunit 1) (Myosin phosphatase
            target subunit 1) (Protein phosphatase myosin-binding
            subunit)
          Length = 1030

 Score = 37.0 bits (84), Expect = 0.037
 Identities = 33/117 (28%), Positives = 55/117 (47%), Gaps = 11/117 (9%)
 Frame = +1

Query: 223  NFLDERSAYLTKFTKDADTEFDMIGQNAMKELD----QIGDQIMERLDSKMQSYEETAEM 390
            ++L+ER  Y ++  KD  T+F  + +  + E +    Q+ D  ME  D K+Q  + T   
Sbjct: 912  SYLEERKPYSSRLEKDDSTDFKKLYEQILAENEKLKAQLHDTNMELTDLKLQLEKATQRQ 971

Query: 391  QR------QEIEMNE-RVLEDFEDWIEEEKNEGMFFKSLGKVKKPQNNEEIKVKAKI 540
            +R       E+E  E R LE     +EEE       K+  +  K +N   I+V +K+
Sbjct: 972  ERFADRSLLEMEKRERRALERRISEMEEELKMLPDLKADNQRLKDENGALIRVISKL 1028

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>REN3B_HUMAN (Q9BZI7) Regulator of nonsense transcripts 3B (Nonsense mRNA|
           reducing factor 3B) (Up-frameshift suppressor 3 homolog
           B) (hUpf3B) (hUpf3p-X)
          Length = 483

 Score = 36.2 bits (82), Expect = 0.063
 Identities = 26/110 (23%), Positives = 51/110 (46%), Gaps = 1/110 (0%)
 Frame = +1

Query: 226 FLDERSAYLTKFTKDADTEFDMIGQNAMKELDQIGDQIMERLDSKMQSYEETAE-MQRQE 402
           FL+  +    K T   +T  + I     + + +    ++  L +K +  EE  E  +R+E
Sbjct: 163 FLESYATDNEKMTSTPETLLEEIEAKNRELIAKKTTPLLSFLKNKQRMREEKREERRRRE 222

Query: 403 IEMNERVLEDFEDWIEEEKNEGMFFKSLGKVKKPQNNEEIKVKAKIEAQK 552
           IE   +  E+   W EEEK +    + L K+ +    +++K + KI+  +
Sbjct: 223 IERKRQREEERRKWKEEEKRKRKDIEKLKKIDRIPERDKLKDEPKIKVHR 272

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>MYPT1_RAT (Q10728) Protein phosphatase 1 regulatory subunit 12A (Myosin|
            phosphatase-targeting subunit 1) (Myosin phosphatase
            target subunit 1) (Protein phosphatase myosin-binding
            subunit) (MBSP) (Serine/threonine protein phosphatase PP1
            smooth muscle reg
          Length = 1032

 Score = 36.2 bits (82), Expect = 0.063
 Identities = 33/117 (28%), Positives = 55/117 (47%), Gaps = 11/117 (9%)
 Frame = +1

Query: 223  NFLDERSAYLTKFTKDADTEFDMIGQNAMKELD----QIGDQIMERLDSKMQSYEETAEM 390
            ++L+ER  Y ++  KD  T+F  + +  + E +    Q+ D  ME  D K+Q  + T   
Sbjct: 914  SYLEERKPYGSRLEKDDSTDFKKLYEQILAENEKLKAQLHDTNMELTDLKLQLEKATQRQ 973

Query: 391  QR------QEIEMNE-RVLEDFEDWIEEEKNEGMFFKSLGKVKKPQNNEEIKVKAKI 540
            +R       E+E  E R LE     +EEE       K+  +  K +N   I+V +K+
Sbjct: 974  ERFADRSLLEMEKRERRALERRISEMEEELKMLPDLKADNQRLKDENGALIRVISKL 1030

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>MYO1_CAEEL (P02567) Myosin-1 (Myosin heavy chain D) (MHC D)|
          Length = 1938

 Score = 36.2 bits (82), Expect = 0.063
 Identities = 34/137 (24%), Positives = 62/137 (45%), Gaps = 4/137 (2%)
 Frame = +1

Query: 154  GDQRQQEVLAKIAMLQTQKVRITNFLDERSAYLTKFTKDADTEFDMIGQNAMKELDQIGD 333
            G +  QEV   +  L+ +K  + + LDE  A L       + E   +      E+ QI  
Sbjct: 1526 GGRTYQEVHKSVRRLEQEKDELQHALDEAEAAL-------EAEESKV-LRLQIEVQQIRS 1577

Query: 334  QIMERLDSKMQSYEETAEMQRQEIEMNERVLEDFEDWIEEEKNEGMFFKSLGKVKKPQNN 513
            +I +R+  K + +E T +  ++ +E  +  LE       E K++    ++  K++   N 
Sbjct: 1578 EIEKRIQEKEEEFENTRKNHQRALESIQASLE------TEAKSKAELARAKKKLETDINQ 1631

Query: 514  EEIKV----KAKIEAQK 552
             EI +    KA ++AQK
Sbjct: 1632 LEIALDHANKANVDAQK 1648

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>Y1739_STRPN (P67282) UPF0144 protein SP1739|
          Length = 534

 Score = 35.8 bits (81), Expect = 0.083
 Identities = 28/121 (23%), Positives = 58/121 (47%), Gaps = 6/121 (4%)
 Frame = +1

Query: 121 DAGSDAPLPHGGDQRQQEVLAKIAMLQTQKVRITNFLDERSAYLTKFTKDADTEFDMIGQ 300
           +A  +A    G  +R+ ++L   A  +++ ++    L+ +     K+ ++ D EF    +
Sbjct: 38  NAEQEATNLRGQAEREADLLVNEAKRESKSLKKEALLEAKEE-ARKYREEVDAEF----K 92

Query: 301 NAMKELDQIGDQIMERL------DSKMQSYEETAEMQRQEIEMNERVLEDFEDWIEEEKN 462
           +  +EL QI  ++ ER       D  + S E+T E + Q I    + L+  E+ +EE + 
Sbjct: 93  SERQELKQIESRLTERATSLDRKDDNLTSKEQTLEQKEQSISDRAKNLDAREEQLEEVER 152

Query: 463 E 465
           +
Sbjct: 153 Q 153

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>Y1584_STRR6 (P67283) UPF0144 protein spr1584|
          Length = 534

 Score = 35.8 bits (81), Expect = 0.083
 Identities = 28/121 (23%), Positives = 58/121 (47%), Gaps = 6/121 (4%)
 Frame = +1

Query: 121 DAGSDAPLPHGGDQRQQEVLAKIAMLQTQKVRITNFLDERSAYLTKFTKDADTEFDMIGQ 300
           +A  +A    G  +R+ ++L   A  +++ ++    L+ +     K+ ++ D EF    +
Sbjct: 38  NAEQEATNLRGQAEREADLLVNEAKRESKSLKKEALLEAKEE-ARKYREEVDAEF----K 92

Query: 301 NAMKELDQIGDQIMERL------DSKMQSYEETAEMQRQEIEMNERVLEDFEDWIEEEKN 462
           +  +EL QI  ++ ER       D  + S E+T E + Q I    + L+  E+ +EE + 
Sbjct: 93  SERQELKQIESRLTERATSLDRKDDNLTSKEQTLEQKEQSISDRAKNLDAREEQLEEVER 152

Query: 463 E 465
           +
Sbjct: 153 Q 153

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>USO1_YEAST (P25386) Intracellular protein transport protein USO1 (Int-1)|
          Length = 1790

 Score = 35.0 bits (79), Expect = 0.14
 Identities = 28/128 (21%), Positives = 62/128 (48%), Gaps = 6/128 (4%)
 Frame = +1

Query: 178  LAKIAMLQTQKVRITNFLDERSAYLTKFTKDADTEFDMIGQNAMKELDQIGDQIMERLDS 357
            L+   +L+ ++  I +  DE  +Y  K T++ D +   I ++  ++L+ + +Q+    +S
Sbjct: 1420 LSNDELLEEKQNTIKSLQDEILSYKDKITRN-DEKLLSIERDNKRDLESLKEQLRAAQES 1478

Query: 358  K------MQSYEETAEMQRQEIEMNERVLEDFEDWIEEEKNEGMFFKSLGKVKKPQNNEE 519
            K      ++  EE +  ++ E+E ++ +++  E  I  E NE     S+  ++K     E
Sbjct: 1479 KAKVEEGLKKLEEESSKEKAELEKSKEMMKKLESTI--ESNETELKSSMETIRKSDEKLE 1536

Query: 520  IKVKAKIE 543
               K+  E
Sbjct: 1537 QSKKSAEE 1544

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>SAP1_SCHPO (P40847) Switch-activating protein 1|
          Length = 254

 Score = 35.0 bits (79), Expect = 0.14
 Identities = 24/80 (30%), Positives = 45/80 (56%), Gaps = 3/80 (3%)
 Frame = +1

Query: 313 ELDQIGDQIMERLDSKMQSYEETAEMQRQEIEMNERVLEDFEDWIEEEKNEGMFFKSLGK 492
           ELDQ+ D+   RL S++Q Y E   + +++ + N+ + E  +   EE++N  M    +  
Sbjct: 111 ELDQLCDEWKARL-SELQQYREKFLVGKRKCDCNDEINERLKKLTEEQQNVDMLVAKVNF 169

Query: 493 VKKP-QNNEE--IKVKAKIE 543
           + K   +NEE  ++V AK++
Sbjct: 170 LSKHLHDNEEKLMQVNAKMD 189

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>CHM2B_BRARE (Q6NXD2) Charged multivesicular body protein 2b|
           (Chromatin-modifying protein 2b) (CHMP2b)
          Length = 214

 Score = 34.3 bits (77), Expect = 0.24
 Identities = 32/121 (26%), Positives = 65/121 (53%), Gaps = 7/121 (5%)
 Frame = +1

Query: 154 GDQRQQEVLAK-IAMLQTQKVRITNFLDERSAYLTKFTKDADTEFDMIGQNAMKELDQIG 330
           G++   +VLAK +  ++ QK R T  +  +   ++  TK  +++  M G  AM    +  
Sbjct: 53  GNRDACKVLAKQLVQVRKQKTR-TYAVSSKVTSMSTQTKLMNSQMKMAG--AMATTTKTM 109

Query: 331 DQIMERLDSK-----MQSYE-ETAEMQRQEIEMNERVLEDFEDWIEEEKNEGMFFKSLGK 492
             + +++D K     +Q+++ ETA+M   E  MN+ + E FED  +EE+++ +  + L +
Sbjct: 110 QAVNKKMDPKKTMQTLQNFQKETAKMDMTEEMMNDTLDEIFEDSGDEEESQDIVNQVLDE 169

Query: 493 V 495
           +
Sbjct: 170 I 170

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>SPC97_YEAST (P38863) Spindle pole body component SPC97|
          Length = 823

 Score = 33.5 bits (75), Expect = 0.41
 Identities = 23/93 (24%), Positives = 49/93 (52%), Gaps = 2/93 (2%)
 Frame = +1

Query: 193 MLQTQKVRITNFLDERSAYLTKFTKDADTEFDMIGQNAMKELDQIGDQ--IMERLDSKMQ 366
           +LQ     I  FL++   YL    +  + +F+ +   +++EL+QI ++  + ++++    
Sbjct: 134 VLQRFAYEIRRFLED--VYLKTLVERLERDFNKVPNFSIRELEQIINETEVNKQMELLYN 191

Query: 367 SYEETAEMQRQEIEMNERVLEDFEDWIEEEKNE 465
            YEE    + +E   N+   EDF ++++  KNE
Sbjct: 192 IYEEIFR-EIEERRTNQSSQEDFNNFMDSMKNE 223

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>CING_MOUSE (P59242) Cingulin|
          Length = 1191

 Score = 33.5 bits (75), Expect = 0.41
 Identities = 31/129 (24%), Positives = 61/129 (47%), Gaps = 9/129 (6%)
 Frame = +1

Query: 109  SSSEDAGSDAPLPHGGDQRQQEVLAKIAMLQTQKVRITNFLDERSAY---LTKFTKDADT 279
            ++ E+ G+ A      + R  E    +A L  ++  +   L+E       L +   + + 
Sbjct: 771  AAQEEEGNLAAAKRALEVRLDEAQRGLARLGQEQQALNRALEEEGKQREALRRSKAELEE 830

Query: 280  EFDMIGQNA---MKELDQIGDQ---IMERLDSKMQSYEETAEMQRQEIEMNERVLEDFED 441
            +  ++ +      KEL+QIGD     +++L ++M+ Y+E A   R+E+   +R  +D+  
Sbjct: 831  QKRLLNRTVDRLNKELEQIGDDSKLALQQLQAQMEDYKEKA---RKEVADAQRQAKDWAS 887

Query: 442  WIEEEKNEG 468
              E EKN G
Sbjct: 888  --EAEKNSG 894

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>Y1505_METJA (Q58900) Putative ATP-dependent RNA helicase MJ1505 (EC 3.6.1.-)|
          Length = 778

 Score = 33.5 bits (75), Expect = 0.41
 Identities = 25/71 (35%), Positives = 40/71 (56%), Gaps = 5/71 (7%)
 Frame = +1

Query: 355 SKMQSYEETAEMQRQEIEMNERVLEDFEDWIEEEKNEGM-----FFKSLGKVKKPQNNEE 519
           SK +  EET E++ +EIE    V E+ ++  EEEK +       F K + +VK+   +EE
Sbjct: 504 SKEEIKEETEEIKEKEIESKTAVKEETKE--EEEKTKKPVTILDFIKQI-EVKERSKSEE 560

Query: 520 IKVKAKIEAQK 552
            K+K +I+  K
Sbjct: 561 DKIKQEIKIPK 571

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>HEM1_METMP (Q6M130) Glutamyl-tRNA reductase (EC 1.2.1.70) (GluTR)|
          Length = 382

 Score = 33.5 bits (75), Expect = 0.41
 Identities = 25/91 (27%), Positives = 50/91 (54%), Gaps = 6/91 (6%)
 Frame = +1

Query: 268 DADTEFDMIGQNAMKELDQIGDQIMERLDSKMQSYEETAE-----MQRQEIEMN-ERVLE 429
           DA  EF+ I    + +L  I D+ +++   ++ + E+  +     + +Q  ++N E VL+
Sbjct: 256 DAVREFENINLYTIDDLRNISDKNLQKRIEEVPAVEKIIDEEYDVLMKQIEKINVEEVLK 315

Query: 430 DFEDWIEEEKNEGMFFKSLGKVKKPQNNEEI 522
           DF ++IEE + + +  +   K+ K +N EEI
Sbjct: 316 DFNNYIEEIRTKEL--EKAIKLSKTKNPEEI 344

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>UPF3_YEAST (P48412) Nonsense-mediated mRNA decay protein 3 (Up-frameshift|
           suppressor 3)
          Length = 387

 Score = 33.1 bits (74), Expect = 0.54
 Identities = 30/118 (25%), Positives = 53/118 (44%), Gaps = 14/118 (11%)
 Frame = +1

Query: 241 SAYLTKFTKDADTEFDMIG-----------QNAMKEL---DQIGDQIMERLDSKMQSYEE 378
           S Y+ KFT+ +  +  ++G            N+MK+L   D+   Q    L S  + + +
Sbjct: 185 SPYVKKFTQTSKKDAALVGTIEEDEIFKTFMNSMKQLNENDEYSFQDFSVLKSLEKEFSK 244

Query: 379 TAEMQRQEIEMNERVLEDFEDWIEEEKNEGMFFKSLGKVKKPQNNEEIKVKAKIEAQK 552
           + E++ +  E  ERVL +     ++ KN+    K+    KK +  E     AKI  +K
Sbjct: 245 SIELENKIAERTERVLTELVGTGDKVKNKNKKKKNKNAKKKFKEEE---ASAKIPKKK 299

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>CENPE_HUMAN (Q02224) Centromeric protein E (CENP-E protein)|
          Length = 2663

 Score = 33.1 bits (74), Expect = 0.54
 Identities = 17/90 (18%), Positives = 43/90 (47%)
 Frame = +1

Query: 196  LQTQKVRITNFLDERSAYLTKFTKDADTEFDMIGQNAMKELDQIGDQIMERLDSKMQSYE 375
            ++T+ +R+T  L E    +   TK+ D +   + +    E DQ+ + + E +   ++  E
Sbjct: 1663 IETENIRLTQILHENLEEMRSVTKERD-DLRSVEETLKVERDQLKENLRETITRDLEKQE 1721

Query: 376  ETAEMQRQEIEMNERVLEDFEDWIEEEKNE 465
            E  ++    ++ ++  ++     + E+ NE
Sbjct: 1722 E-LKIVHMHLKEHQETIDKLRGIVSEKTNE 1750

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>MPP10_HUMAN (O00566) U3 small nucleolar ribonucleoprotein protein MPP10 (M|
           phase phosphoprotein 10)
          Length = 681

 Score = 33.1 bits (74), Expect = 0.54
 Identities = 28/103 (27%), Positives = 52/103 (50%), Gaps = 14/103 (13%)
 Frame = +1

Query: 265 KDADTEFDMI-----------GQNAMKELDQIGDQIMERLDSKMQSYEETAEMQRQEIEM 411
           +D+D +FD+            GQ   +E   + D+  +   S+M++Y E  E + +  + 
Sbjct: 169 EDSDLDFDISKLEQQSKVQNKGQGKPREKSIVDDKFFKL--SEMEAYLENIEKEEERKDD 226

Query: 412 NERVLED---FEDWIEEEKNEGMFFKSLGKVKKPQNNEEIKVK 531
           N+   ED   FED I+ +++EG  F S  K+K  +++  +K K
Sbjct: 227 NDEEEEDIDFFED-IDSDEDEGGLFGS-KKLKSGKSSRNLKYK 267

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>PCLO_MOUSE (Q9QYX7) Protein piccolo (Aczonin) (Multidomain presynaptic|
            cytomatrix protein) (Brain-derived HLMN protein)
          Length = 5038

 Score = 32.7 bits (73), Expect = 0.70
 Identities = 20/105 (19%), Positives = 54/105 (51%), Gaps = 4/105 (3%)
 Frame = +1

Query: 157  DQRQQEVLAKIAMLQTQKVRITNFLDERSAYLTKFTKDADTEFDMIGQNAMKELDQIGDQ 336
            D++QQ++  +  +L+ +K++   F +E      +  +  + E  M+ Q  ++EL  +   
Sbjct: 3107 DKQQQQLDLERELLELEKIKQQRFAEELEWERQEIQRFREQEKIMV-QKKLEELQSMKQH 3165

Query: 337  IMERLDSKMQSY----EETAEMQRQEIEMNERVLEDFEDWIEEEK 459
            ++ + + + Q+     +ET   Q+ ++E  +++ +     +EE+K
Sbjct: 3166 LLYQQEEERQAQFMMRQETLAQQQLQLEQIQQLQQQLHQQLEEQK 3210

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>PCLO_RAT (Q9JKS6) Protein piccolo (Aczonin) (Multidomain presynaptic|
            cytomatrix protein)
          Length = 5085

 Score = 32.7 bits (73), Expect = 0.70
 Identities = 20/105 (19%), Positives = 54/105 (51%), Gaps = 4/105 (3%)
 Frame = +1

Query: 157  DQRQQEVLAKIAMLQTQKVRITNFLDERSAYLTKFTKDADTEFDMIGQNAMKELDQIGDQ 336
            D++QQ++  +  +L+ +K++   F +E      +  +  + E  M+ Q  ++EL  +   
Sbjct: 3153 DKQQQQLDLERELLELEKIKQQRFAEELEWERQEIQRFREQEKIMV-QKKLEELQSMKQH 3211

Query: 337  IMERLDSKMQSY----EETAEMQRQEIEMNERVLEDFEDWIEEEK 459
            ++ + + + Q+     +ET   Q+ ++E  +++ +     +EE+K
Sbjct: 3212 LLYQQEEERQAQFMMRQETLAQQQLQLEQIQQLQQQLHQQLEEQK 3256

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>TF3B_MOUSE (Q8CFK2) Transcription factor IIIB 90 kDa subunit (TFIIIB90)|
           (hTFIIIB90) (B-related factor 1) (BRF-1)
          Length = 676

 Score = 32.7 bits (73), Expect = 0.70
 Identities = 29/117 (24%), Positives = 59/117 (50%), Gaps = 10/117 (8%)
 Frame = +1

Query: 73  VHQSRRRFSICKSSSEDAGSDAPLPHGGDQRQQEVLAKIAMLQ-TQKVRITNFLDERSAY 249
           +H  RR   +C ++   A       H   +  +EV++ + + + T + R+T F D  ++ 
Sbjct: 219 MHTGRRPSGLCGAALLVAAR----MHDFRRTVKEVISVVKVCESTLRKRLTEFEDTPTSQ 274

Query: 250 LT--KFTK-DADTEFDMIGQNA------MKELDQIGDQIMERLDSKMQSYEETAEMQ 393
           LT  +F K D + E D     A      MK+L+Q+  + +E ++ ++ SY++  E++
Sbjct: 275 LTIDEFMKIDLEEECDPPSYTAGQRKLRMKQLEQVLSKKLEEVEGEISSYQDAIEIE 331

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>KPC1_YEAST (P24583) Protein kinase C-like 1 (EC 2.7.11.13) (PKC 1)|
          Length = 1151

 Score = 32.7 bits (73), Expect = 0.70
 Identities = 29/123 (23%), Positives = 57/123 (46%), Gaps = 5/123 (4%)
 Frame = +1

Query: 112 SSEDAGSDAPLPHGGDQRQQEVLAKIAMLQTQ-KVRITNFLDERSAYLTKFTKDADTEFD 288
           S +  G D+P      ++   ++ K   LQT  + ++  F+DE  AYL  FT+ A    +
Sbjct: 601 SPQKVGRDSPT-----KQHDPIIDKKISLQTHGREKLNKFIDENEAYL-NFTEGAQQTAE 654

Query: 289 MIGQNAMKELDQIGDQ----IMERLDSKMQSYEETAEMQRQEIEMNERVLEDFEDWIEEE 456
               +  K LD   ++    + +      Q++E   ++ R E+E+ +   E+ E  I+++
Sbjct: 655 F--SSPEKTLDPTSNRRSLGLTDLSIEHSQTWESKDDLMRDELELWKAQREEMELEIKQD 712

Query: 457 KNE 465
             E
Sbjct: 713 SGE 715

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>TF3B_HUMAN (Q92994) Transcription factor IIIB 90 kDa subunit (TFIIIB90)|
           (hTFIIIB90) (B-related factor 1) (BRF-1) (hBRF) (TATA
           box-binding protein-associated factor, RNA polymerase
           III, subunit 2) (TAF3B2)
          Length = 677

 Score = 32.7 bits (73), Expect = 0.70
 Identities = 29/117 (24%), Positives = 59/117 (50%), Gaps = 10/117 (8%)
 Frame = +1

Query: 73  VHQSRRRFSICKSSSEDAGSDAPLPHGGDQRQQEVLAKIAMLQ-TQKVRITNFLDERSAY 249
           +H  RR   +C ++   A       H   +  +EV++ + + + T + R+T F D  ++ 
Sbjct: 219 MHTGRRPSGLCGAALLVAAR----MHDFRRTVKEVISVVKVCESTLRKRLTEFEDTPTSQ 274

Query: 250 LT--KFTK-DADTEFDMIGQNA------MKELDQIGDQIMERLDSKMQSYEETAEMQ 393
           LT  +F K D + E D     A      MK+L+Q+  + +E ++ ++ SY++  E++
Sbjct: 275 LTIDEFMKIDLEEECDPPSYTAGQRKLRMKQLEQVLSKKLEEVEGEISSYQDAIEIE 331

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>TIG_OCEIH (Q8CXB7) Trigger factor (TF)|
          Length = 428

 Score = 32.3 bits (72), Expect = 0.92
 Identities = 17/69 (24%), Positives = 37/69 (53%)
 Frame = +1

Query: 292 IGQNAMKELDQIGDQIMERLDSKMQSYEETAEMQRQEIEMNERVLEDFEDWIEEEKNEGM 471
           I +   KEL ++ D+  + +D +++S +E  + +R E+E N++        +E +K E +
Sbjct: 239 INEVKAKELPELDDEFAKDVDEEVESLDELKKKKRNELETNKK------QEVENKKREEL 292

Query: 472 FFKSLGKVK 498
             K+   V+
Sbjct: 293 IQKASDNVE 301

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>PCLO_HUMAN (Q9Y6V0) Protein piccolo (Aczonin)|
          Length = 5183

 Score = 32.3 bits (72), Expect = 0.92
 Identities = 20/105 (19%), Positives = 54/105 (51%), Gaps = 4/105 (3%)
 Frame = +1

Query: 157  DQRQQEVLAKIAMLQTQKVRITNFLDERSAYLTKFTKDADTEFDMIGQNAMKELDQIGDQ 336
            D++QQ++  +  +L+ +K++   F +E      +  +  + E  M+ Q  ++EL  +   
Sbjct: 3139 DKQQQQLDLERELLELEKIKQQRFAEELEWERQEIQRFREQEKIMV-QKKLEELQSMKQH 3197

Query: 337  IMERLDSKMQSY----EETAEMQRQEIEMNERVLEDFEDWIEEEK 459
            ++ + + + Q+     +ET   Q+ ++E  +++ +     +EE+K
Sbjct: 3198 LLFQQEEERQAQFMMRQETLAQQQLQLEQIQQLQQQLHQQLEEQK 3242

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>K2C4_MOUSE (P07744) Keratin, type II cytoskeletal 4 (Cytokeratin-4) (CK-4)|
           (Keratin-4) (K4) (Cytoskeletal 57 kDa keratin)
          Length = 525

 Score = 32.3 bits (72), Expect = 0.92
 Identities = 26/127 (20%), Positives = 59/127 (46%), Gaps = 4/127 (3%)
 Frame = +1

Query: 181 AKIAMLQTQKVRITNFLDERSAYLTKFTKDADTEFDMIGQNAM----KELDQIGDQIMER 348
           A+   ++T   +  +F+D +  +L +  K  +T+++++ Q       K LD   +  +  
Sbjct: 145 AEREQIKTLNNKFASFID-KVRFLEQQNKVLETKWNLLQQQTTTTSPKSLDPFFETYINA 203

Query: 349 LDSKMQSYEETAEMQRQEIEMNERVLEDFEDWIEEEKNEGMFFKSLGKVKKPQNNEEIKV 528
           L   + +        + E++M +  +EDF+   EEE N+    ++   V K   +    +
Sbjct: 204 LRKNLDTLSNDKGRLQSELKMMQDSVEDFKTKYEEEINKRTAAENDFVVLKKDVDAAYMI 263

Query: 529 KAKIEAQ 549
           K ++EA+
Sbjct: 264 KVELEAK 270

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>CING_HUMAN (Q9P2M7) Cingulin|
          Length = 1197

 Score = 32.3 bits (72), Expect = 0.92
 Identities = 32/129 (24%), Positives = 59/129 (45%), Gaps = 9/129 (6%)
 Frame = +1

Query: 109  SSSEDAGSDAPLPHGGDQRQQEVLAKIAMLQTQKVRITNFLDERSAYLTKFTKD-ADTE- 282
            +S E+ GS A      + R +E    +A L  ++  +   L+E         +  A+ E 
Sbjct: 777  ASQEEEGSLAAAKRALEARLEEAQRGLARLGQEQQTLNRALEEEGKQREVLRRGKAELEE 836

Query: 283  ----FDMIGQNAMKELDQIGD---QIMERLDSKMQSYEETAEMQRQEIEMNERVLEDFED 441
                 D       KEL++IG+   Q +++L ++++ Y+E A   R+E+   +R  +D+  
Sbjct: 837  QKRLLDRTVDRLNKELEKIGEDSKQALQQLQAQLEDYKEKA---RREVADAQRQAKDWAS 893

Query: 442  WIEEEKNEG 468
              E EK  G
Sbjct: 894  --EAEKTSG 900

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>MYH7_PIG (P79293) Myosin heavy chain, cardiac muscle beta isoform (MyHC-beta)|
          Length = 1935

 Score = 32.3 bits (72), Expect = 0.92
 Identities = 26/133 (19%), Positives = 62/133 (46%), Gaps = 6/133 (4%)
 Frame = +1

Query: 172  EVLAKIAMLQTQKVRITNFLDERSAYLTKFTKDADTEFDMIGQNAMKELDQIGDQIMERL 351
            ++ ++ A LQT+   ++  LDE+ A +++ T+   T          ++L+ +  Q+ E +
Sbjct: 1272 DLTSQRAKLQTENGELSRQLDEKEALISQLTRGKLT--------YTQQLEDLKRQLEEEV 1323

Query: 352  DSK------MQSYEETAEMQRQEIEMNERVLEDFEDWIEEEKNEGMFFKSLGKVKKPQNN 513
             +K      +QS    A++ R++ E       + +  + +  +E   +++  +    Q  
Sbjct: 1324 KAKNALAHALQSARHAADLLREQYEEETETKAELQRVLSKANSEVAQWRTKYETDAIQRT 1383

Query: 514  EEIKVKAKIEAQK 552
            EE++   K  AQ+
Sbjct: 1384 EELEEAKKKLAQR 1396

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>PRIL_METBF (Q46E38) Probable DNA primase large subunit (EC 2.7.7.-)|
          Length = 413

 Score = 32.0 bits (71), Expect = 1.2
 Identities = 21/74 (28%), Positives = 37/74 (50%)
 Frame = +1

Query: 331 DQIMERLDSKMQSYEETAEMQRQEIEMNERVLEDFEDWIEEEKNEGMFFKSLGKVKKPQN 510
           D++ E+++  +  YE+   ++ +E EM +   E  E   +EEK E          ++ + 
Sbjct: 314 DRLCEKINHPLAYYEKKIYLKNKEKEMEKEKEEKEEKEKQEEKKE---------EEEKEK 364

Query: 511 NEEIKVKAKIEAQK 552
            EEIK K K E Q+
Sbjct: 365 QEEIKKKKKKEKQE 378

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>YR445_MIMIV (Q5UQP3) DnaJ-like protein R445|
          Length = 368

 Score = 32.0 bits (71), Expect = 1.2
 Identities = 14/55 (25%), Positives = 35/55 (63%), Gaps = 3/55 (5%)
 Frame = +1

Query: 391 QRQEIEMNERVLEDFE---DWIEEEKNEGMFFKSLGKVKKPQNNEEIKVKAKIEA 546
           ++Q  E N+R++ + +   D+++ +K    F  S+G++K+P N +++  K +++A
Sbjct: 73  EKQRNEYNQRLIVEKQACSDYLKLKKRYNDFADSIGELKEPSNEQKLSFKEQMKA 127

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>DDX23_HUMAN (Q9BUQ8) Probable ATP-dependent RNA helicase DDX23 (EC 3.6.1.-)|
           (DEAD box protein 23) (100 kDa U5 snRNP-specific
           protein) (U5-100kD) (PRP28 homolog)
          Length = 820

 Score = 31.6 bits (70), Expect = 1.6
 Identities = 25/109 (22%), Positives = 56/109 (51%), Gaps = 11/109 (10%)
 Frame = +1

Query: 256 KFTKDADTEFDMIGQNAMKELDQIGDQIMERLDSKMQSYEET---------AEMQRQEIE 408
           K  KD D++ D   ++  K+L +     +E L +K ++ EE          AE + + ++
Sbjct: 117 KSRKDRDSKKDEEDEHGDKKL-KAQPLSLEELLAKKKAEEEAEAKPKFLSKAEREAEALK 175

Query: 409 MNERVLEDFEDWIEEEKNEGMFFKSLGK--VKKPQNNEEIKVKAKIEAQ 549
             ++ +E+ +  +EEE+ +   F+ LG+  ++ PQ  E  + + ++E +
Sbjct: 176 RRQQEVEERQRMLEEERKKRKQFQDLGRKMLEDPQERERRERRERMERE 224

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>RAD50_METMA (Q8PUY4) DNA double-strand break repair rad50 ATPase|
          Length = 1070

 Score = 31.6 bits (70), Expect = 1.6
 Identities = 27/101 (26%), Positives = 45/101 (44%), Gaps = 4/101 (3%)
 Frame = +1

Query: 229 LDERSAYLTKFTKDADTEFDMIGQNAMKELDQIGDQIMERLDSKMQSYEETAEMQRQEIE 408
           L+E+ + L     +  T+       A+KE +  GD  +  LDS+MQS        + EIE
Sbjct: 417 LEEKESLLRDRKNEVSTKLGF----ALKEKES-GDASLRELDSEMQSCRVAVSKGKSEIE 471

Query: 409 MNERVLEDFE----DWIEEEKNEGMFFKSLGKVKKPQNNEE 519
             E+ + D      D+ E++       K+LG  ++   N E
Sbjct: 472 ALEKEIRDNSKAVLDFQEQKSEVFAGLKALGFTEEQLENLE 512

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>RNF17_HUMAN (Q9BXT8) RING finger protein 17|
          Length = 653

 Score = 31.6 bits (70), Expect = 1.6
 Identities = 31/148 (20%), Positives = 62/148 (41%), Gaps = 12/148 (8%)
 Frame = +1

Query: 145 PHGGDQRQQEVLAKIAMLQTQKVRITNFLDERSAYLTKFTKDADTEFDMIGQNAMKELDQ 324
           P  G  ++  ++ K+   +T K    +F        T   + A T+  ++  +A+     
Sbjct: 88  PMAGYIKEDSIMEKLQP-KTIKNCSQDFKKTADQLTTGLERSASTDKTLLNSSAVMLDTN 146

Query: 325 IGDQIMERLDSKMQSYEETA-------EMQRQEIEMNERVLEDFEDWIEE-----EKNEG 468
             ++I E L++   S+E+ +        MQ+Q IE  ERV+E  E   ++     +  + 
Sbjct: 147 TAEEIDEALNTAHHSFEQLSIAGKALEHMQKQTIEERERVIEVVEKQFDQLLAFFDSRKK 206

Query: 469 MFFKSLGKVKKPQNNEEIKVKAKIEAQK 552
              +   +      +  IK K+ IE +K
Sbjct: 207 NLCEEFARTTDDYLSNLIKAKSYIEEKK 234

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>FAR10_YEAST (Q06001) Factor arrest protein 10|
          Length = 478

 Score = 31.6 bits (70), Expect = 1.6
 Identities = 18/75 (24%), Positives = 40/75 (53%)
 Frame = +1

Query: 301 NAMKELDQIGDQIMERLDSKMQSYEETAEMQRQEIEMNERVLEDFEDWIEEEKNEGMFFK 480
           N    L+     ++E+ D ++   +    ++R+     E+++E   + +++ + + MFFK
Sbjct: 312 NYTTHLEYTNKLLVEKNDQQLVKLQNG--LRRKLSGKYEKIIEQNRNQVKQLERDHMFFK 369

Query: 481 SLGKVKKPQNNEEIK 525
              +VKK +NNE+ K
Sbjct: 370 KSFEVKKRRNNEKQK 384

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>MYH10_HUMAN (P35580) Myosin-10 (Myosin heavy chain, nonmuscle IIb) (Nonmuscle|
            myosin heavy chain IIb) (NMMHC II-b) (NMMHC-IIB)
            (Cellular myosin heavy chain, type B) (Nonmuscle myosin
            heavy chain-B) (NMMHC-B)
          Length = 1976

 Score = 31.6 bits (70), Expect = 1.6
 Identities = 31/133 (23%), Positives = 55/133 (41%), Gaps = 1/133 (0%)
 Frame = +1

Query: 154  GDQRQQEVLAKIAMLQTQKVRITNFLDERSAYLTKFTKDADTEFDMIGQNAMKELDQIGD 333
            GD+ + E+  K + LQ +   ++  L+E      KF KDA +                  
Sbjct: 1271 GDRLRVELAEKASKLQNELDNVSTLLEEAEKKGIKFAKDAAS------------------ 1312

Query: 334  QIMERLDSKMQSYEE-TAEMQRQEIEMNERVLEDFEDWIEEEKNEGMFFKSLGKVKKPQN 510
                 L+S++Q  +E   E  RQ++ ++ R+ +     +EEEKN            + Q 
Sbjct: 1313 -----LESQLQDTQELLQEETRQKLNLSSRIRQ-----LEEEKNS----------LQEQQ 1352

Query: 511  NEEIKVKAKIEAQ 549
             EE + +  +E Q
Sbjct: 1353 EEEEEARKNLEKQ 1365

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>ACCA_MANSM (Q65UI5) Acetyl-coenzyme A carboxylase carboxyl transferase subunit|
           alpha (EC 6.4.1.2) (Acetyl-CoA carboxylase
           carboxyltransferase subunit alpha) (ACCase subunit
           alpha)
          Length = 321

 Score = 31.2 bits (69), Expect = 2.0
 Identities = 21/69 (30%), Positives = 36/69 (52%), Gaps = 2/69 (2%)
 Frame = +1

Query: 241 SAYLTKFTKDADTEFDMIGQNA--MKELDQIGDQIMERLDSKMQSYEETAEMQRQEIEMN 414
           ++ L K  + A T  +++G  A  +KEL+ I + + E L    + Y+E A+  +Q     
Sbjct: 236 ASILWKSAEKASTAAEVMGLTASRLKELELIDNIVTEPLGGAHRQYDEMAQALKQ----- 290

Query: 415 ERVLEDFED 441
            R+L D ED
Sbjct: 291 -RILSDLED 298

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>LMO7_HUMAN (Q8WWI1) LIM domain only protein 7 (LOMP) (F-box only protein 20)|
          Length = 1683

 Score = 31.2 bits (69), Expect = 2.0
 Identities = 19/51 (37%), Positives = 28/51 (54%), Gaps = 3/51 (5%)
 Frame = +1

Query: 310  KELDQIGDQIMERLDSKMQSYEETAEMQRQEI--EMNERV-LEDFEDWIEE 453
            K LDQIG+    +  SK +     AE++RQ+I  EM +R  L +   WI +
Sbjct: 1439 KYLDQIGNMTSSQRRSKKEQVPSGAELERQQILQEMRKRTPLHNDNSWIRQ 1489

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>FRPA_NEIMB (Q9K0K9) Iron-regulated protein frpA|
          Length = 1302

 Score = 31.2 bits (69), Expect = 2.0
 Identities = 22/59 (37%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
 Frame = +1

Query: 262 TKDADTEFDMIGQNAMKELDQIGDQIMERLDSKMQSYEETAEMQRQEI-EMNE-RVLED 432
           TK AD  F   G  A+ ELD  GD I+   D+  QS     ++ +  I + NE R LE+
Sbjct: 353 TKLADGSFAKHGYAALAELDSNGDNIINAADAAFQSLRVWQDLNQDGISQANELRTLEE 411

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>MYH8_HUMAN (P13535) Myosin-8 (Myosin heavy chain, skeletal muscle, perinatal)|
            (MyHC-perinatal)
          Length = 1937

 Score = 31.2 bits (69), Expect = 2.0
 Identities = 30/154 (19%), Positives = 69/154 (44%), Gaps = 7/154 (4%)
 Frame = +1

Query: 112  SSEDAGSDAPLPHGGDQRQ-QEVLAKIAMLQTQKVRITNFLDERSAYLTKFTKDADTEFD 288
            S ED  S+        QR   ++ A+ A LQT+    +  LDE+ A +++ ++       
Sbjct: 1254 SLEDQVSELKTKEEEQQRLINDLTAQRARLQTEAGEYSRQLDEKDALVSQLSRSK----- 1308

Query: 289  MIGQNAMKELDQIGDQIMERLDSK------MQSYEETAEMQRQEIEMNERVLEDFEDWIE 450
               Q + ++++++  Q+ E   +K      +QS     ++ R++ E  +    + +  + 
Sbjct: 1309 ---QASTQQIEELKHQLEEETKAKNALAHALQSSRHDCDLLREQYEEEQEGKAELQRALS 1365

Query: 451  EEKNEGMFFKSLGKVKKPQNNEEIKVKAKIEAQK 552
            +  +E   +++  +    Q  EE++   K  AQ+
Sbjct: 1366 KANSEVAQWRTKYETDAIQRTEELEEAKKKLAQR 1399

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>DREB_RAT (Q07266) Drebrin (Developmentally-regulated brain protein)|
          Length = 706

 Score = 31.2 bits (69), Expect = 2.0
 Identities = 25/108 (23%), Positives = 47/108 (43%), Gaps = 6/108 (5%)
 Frame = +1

Query: 160 QRQQEVLAKIAMLQTQKVRITNFLDERSAYLTKFTKDADTEFDMIGQNAMKELDQIGDQI 339
           QR    LA+++     ++R+    +      T    DA  E   I +    E  +  +++
Sbjct: 130 QRLSNGLARLSSPVLHRLRLREDENAEPVGTTYQKTDAAVEMKRINREQFWEQAKKEEEL 189

Query: 340 MER------LDSKMQSYEETAEMQRQEIEMNERVLEDFEDWIEEEKNE 465
            +       LD++++  +E  E +RQE E  ER   + E  IEE + +
Sbjct: 190 RKEEERKKALDARLRFEQERMEQERQEQEERERRYREREQQIEEHRRK 237

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>DREB_MOUSE (Q9QXS6) Drebrin (Developmentally-regulated brain protein)|
          Length = 705

 Score = 31.2 bits (69), Expect = 2.0
 Identities = 25/108 (23%), Positives = 47/108 (43%), Gaps = 6/108 (5%)
 Frame = +1

Query: 160 QRQQEVLAKIAMLQTQKVRITNFLDERSAYLTKFTKDADTEFDMIGQNAMKELDQIGDQI 339
           QR    LA+++     ++R+    +      T    DA  E   I +    E  +  +++
Sbjct: 130 QRLSNGLARLSSPVLHRLRLREDENAEPVGTTYQKTDAAVEMKRINREQFWEQAKKEEEL 189

Query: 340 MER------LDSKMQSYEETAEMQRQEIEMNERVLEDFEDWIEEEKNE 465
            +       LD++++  +E  E +RQE E  ER   + E  IEE + +
Sbjct: 190 RKEEERKKALDARLRFEQERMEQERQEQEERERRYREREQQIEEHRRK 237

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>MX2_HUMAN (P20592) Interferon-induced GTP-binding protein Mx2|
           (Interferon-regulated resistance GTP-binding protein
           MxB) (p78-related protein)
          Length = 715

 Score = 30.8 bits (68), Expect = 2.7
 Identities = 35/163 (21%), Positives = 64/163 (39%), Gaps = 44/163 (26%)
 Frame = +1

Query: 166 QQEVLAKIAMLQTQKVRITNF---------LDERSAYLTKFTKDADTEFDM--------- 291
           QQE+  ++++ +  K  IT F         L+E SA + +  +   TE  M         
Sbjct: 330 QQEITNRLSLAEATKKEITFFQTHPYFRVLLEEGSATVPRLAERLTTELIMHIQKSLPLL 389

Query: 292 ------IGQNAMKELDQIGDQIMERLDSKMQSYEETAEMQRQEIE--------------- 408
                   Q A +EL + G  I  +   KM    E  +M  Q+IE               
Sbjct: 390 EGQIRESHQKATEELRRCGADIPSQEADKMFFLIEKIKMFNQDIEKLVEGEEVVRENETR 449

Query: 409 MNERVLEDFEDWI-----EEEKNEGMFFKSLGKVKKPQNNEEI 522
           +  ++ EDF++W+       +K + +  + + K +K    +E+
Sbjct: 450 LYNKIREDFKNWVGILATNTQKVKNIIHEEVEKYEKQYRGKEL 492

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>CCD37_HUMAN (Q494V2) Coiled-coil domain-containing protein 37|
          Length = 611

 Score = 30.8 bits (68), Expect = 2.7
 Identities = 24/110 (21%), Positives = 48/110 (43%), Gaps = 7/110 (6%)
 Frame = +1

Query: 214 RITNFLDERSAYLTKFTKDADTEFDMIGQNAMKELDQIGDQIMERLDSKMQSYEETAEMQ 393
           R    L++ +A   +F ++ D       + A KE     ++I+E  D   Q     +E+ 
Sbjct: 188 RAEKSLEKDAALFDEFVRENDCSSVQAMRAAEKETKAKIEKILEIRDLTTQIVNIKSEIS 247

Query: 394 RQEIEMNE-RVLEDF------EDWIEEEKNEGMFFKSLGKVKKPQNNEEI 522
           R E  +   +V +DF      ++W+EE++ +  F K   +V +      +
Sbjct: 248 RFEDTLKHYKVYKDFLYKLSPKEWLEEQEKKHSFLKKAKEVSEASKESSV 297

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>DREB_HUMAN (Q16643) Drebrin (Developmentally-regulated brain protein)|
          Length = 648

 Score = 30.8 bits (68), Expect = 2.7
 Identities = 25/108 (23%), Positives = 46/108 (42%), Gaps = 6/108 (5%)
 Frame = +1

Query: 160 QRQQEVLAKIAMLQTQKVRITNFLDERSAYLTKFTKDADTEFDMIGQNAMKELDQIGDQI 339
           QR    LA+++     ++R+    +      T    DA  E   I +    E  +  +++
Sbjct: 130 QRLSNGLARLSSPVLHRLRLREDENAEPVGTTYQKTDAAVEMKRINREQFWEQAKKEEEL 189

Query: 340 MER------LDSKMQSYEETAEMQRQEIEMNERVLEDFEDWIEEEKNE 465
            +       LD +++  +E  E +RQE E  ER   + E  IEE + +
Sbjct: 190 RKEEERKKALDERLRFEQERMEQERQEQEERERRYREREQQIEEHRRK 237

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>MYT1L_HUMAN (Q9UL68) Myelin transcription factor 1-like protein (MyT1L protein)|
           (MyT1-L)
          Length = 1186

 Score = 30.8 bits (68), Expect = 2.7
 Identities = 19/68 (27%), Positives = 34/68 (50%)
 Frame = +1

Query: 262 TKDADTEFDMIGQNAMKELDQIGDQIMERLDSKMQSYEETAEMQRQEIEMNERVLEDFED 441
           T+D D + +  G+   ++ D+ GD+  E  +   +  EE  E    + E  E V ++ E+
Sbjct: 96  TEDMDEKEEDEGEEYSEDNDEPGDEDEEDEEGDREEEEEIEEEDEDDDEDGEDVEDEEEE 155

Query: 442 WIEEEKNE 465
             EEE+ E
Sbjct: 156 EEEEEEEE 163

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>MYH8_MOUSE (P13542) Myosin-8 (Myosin heavy chain, skeletal muscle, perinatal)|
            (MyHC-perinatal)
          Length = 1937

 Score = 30.8 bits (68), Expect = 2.7
 Identities = 25/133 (18%), Positives = 62/133 (46%), Gaps = 6/133 (4%)
 Frame = +1

Query: 172  EVLAKIAMLQTQKVRITNFLDERSAYLTKFTKDADTEFDMIGQNAMKELDQIGDQIMERL 351
            E+ A+ A LQT+    +  LDE+ A +++ ++          Q + ++++++  Q+ E  
Sbjct: 1275 ELTAQRARLQTEAGEYSRQLDEKDALVSQLSRSK--------QASTQQIEELKRQLEEET 1326

Query: 352  DSK------MQSYEETAEMQRQEIEMNERVLEDFEDWIEEEKNEGMFFKSLGKVKKPQNN 513
             +K      +QS     ++ R++ E  +    + +  + +  +E   +++  +    Q  
Sbjct: 1327 KAKNALAHALQSSRHDCDLLREQYEEEQEGKAELQRALSKANSEVAQWRTKYETDAIQRT 1386

Query: 514  EEIKVKAKIEAQK 552
            EE++   K  AQ+
Sbjct: 1387 EELEEAKKKLAQR 1399

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>SOJO_XENLA (Q9PW73) Cytoskeletal protein Sojo (p170)|
          Length = 1335

 Score = 30.8 bits (68), Expect = 2.7
 Identities = 35/152 (23%), Positives = 66/152 (43%), Gaps = 13/152 (8%)
 Frame = +1

Query: 106 KSSSEDAGSDAPLPHGGDQRQQEVLAKIAMLQTQKVRIT-------NFLDERSAYLTKFT 264
           K ++  +GS   L    +Q+ +++  K+  LQ Q   +        N +D     LTK  
Sbjct: 90  KPTNSQSGS---LIRNTEQQNRQLKEKLNFLQEQNASLVSQNHSLMNKIDCVQTELTKSR 146

Query: 265 KDADTEFDMIGQNAMKELDQIGDQIM------ERLDSKMQSYEETAEMQRQEIEMNERVL 426
                    IG  AM+ L  + ++I+      +  ++ +++ E+  E  R  +   ER+L
Sbjct: 147 SRIRYVESAIGARAMR-LPDLEERILTLEAKADAQENALRTTEDQLEHSRHILAEKERIL 205

Query: 427 EDFEDWIEEEKNEGMFFKSLGKVKKPQNNEEI 522
           + F+D ++  K E      L K  + Q NE +
Sbjct: 206 QMFKDEMKALKEELFASCRLCKRTEKQRNEAL 237

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>KCC4_MOUSE (P08414) Calcium/calmodulin-dependent protein kinase type IV (EC|
           2.7.11.17) (CAM kinase-GR) (CaMK IV)
          Length = 469

 Score = 30.8 bits (68), Expect = 2.7
 Identities = 23/72 (31%), Positives = 37/72 (51%), Gaps = 4/72 (5%)
 Frame = +1

Query: 262 TKDADTEFDMIGQNAMKELDQIGDQIMERLDS----KMQSYEETAEMQRQEIEMNERVLE 429
           T+DA    D++G+  M+E DQ  DQ+     +    K+QS E   +   +E E +  V +
Sbjct: 358 TQDAKDSTDLLGKK-MQEEDQEEDQVEAEASADEMRKLQSEEVEKDAGVKEEETSSMVPQ 416

Query: 430 DFEDWIEEEKNE 465
           D ED +E +  E
Sbjct: 417 DPEDELETDDPE 428

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>SYCP1_MOUSE (Q62209) Synaptonemal complex protein 1 (SCP-1)|
          Length = 993

 Score = 30.4 bits (67), Expect = 3.5
 Identities = 28/129 (21%), Positives = 61/129 (47%), Gaps = 7/129 (5%)
 Frame = +1

Query: 160 QRQQEVLAKIAMLQTQKVRITNFLDERSAYLTKFTKDADTEFDMIGQNAMKELDQIGDQI 339
           QR ++   ++ ++  +  + +N L+E    +TKF  + + E        ++EL  I  + 
Sbjct: 393 QRLEKNEDQLKLITVELQKKSNELEE----MTKFKNNKEVE--------LEELKNILAED 440

Query: 340 MERLDSKMQSYEETAEMQRQE------IEMNERVLEDFEDWIEEEK-NEGMFFKSLGKVK 498
            + LD K Q  +   E+Q +E      +E  E+ + D ++ +   K +E  + K + ++K
Sbjct: 441 QKLLDEKKQVEKLAEELQEKEQELTFLLETREKEVHDLQEQVTVTKTSEQHYLKQVEEMK 500

Query: 499 KPQNNEEIK 525
                E++K
Sbjct: 501 TELEKEKLK 509

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>RPOD_HELPJ (Q9ZMY3) RNA polymerase sigma factor rpoD (Sigma-70)|
          Length = 681

 Score = 30.4 bits (67), Expect = 3.5
 Identities = 16/63 (25%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
 Frame = +1

Query: 358 KMQSYEETAEMQRQEIEMNERVLE--DFEDWIEEEKNEGMFFKSLGKVKKPQNNEEIKVK 531
           K+++ EE  ++  +E+E     L+  DF +W   +    M+ + +G +K    +EEI++ 
Sbjct: 133 KIKNTEEKQKVLDEELEDGYDFLKEKDFLEWSRSDSPVRMYLREMGDIKLLSKDEEIELS 192

Query: 532 AKI 540
            +I
Sbjct: 193 KQI 195

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>PCNT_HUMAN (O95613) Pericentrin (Pericentrin B) (Kendrin)|
          Length = 3336

 Score = 30.4 bits (67), Expect = 3.5
 Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 4/44 (9%)
 Frame = +1

Query: 334  QIMERLDSKMQSYEETAEMQRQEIEMN----ERVLEDFEDWIEE 453
            Q +E L  ++Q  EE AE+Q  E+E N    E  +ED    I+E
Sbjct: 1815 QALEALQQRLQGAEEAAELQLAELERNVALREAEVEDMASRIQE 1858

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>MYH7_HUMAN (P12883) Myosin heavy chain, cardiac muscle beta isoform (MyHC-beta)|
          Length = 1935

 Score = 30.4 bits (67), Expect = 3.5
 Identities = 25/133 (18%), Positives = 61/133 (45%), Gaps = 6/133 (4%)
 Frame = +1

Query: 172  EVLAKIAMLQTQKVRITNFLDERSAYLTKFTKDADTEFDMIGQNAMKELDQIGDQIMERL 351
            ++ ++ A LQT+   ++  LDE+ A +++ T+   T          ++L+ +  Q+ E +
Sbjct: 1272 DLTSQRAKLQTENGELSRQLDEKEALISQLTRGKLT--------YTQQLEDLKRQLEEEV 1323

Query: 352  DSK------MQSYEETAEMQRQEIEMNERVLEDFEDWIEEEKNEGMFFKSLGKVKKPQNN 513
             +K      +QS     ++ R++ E       + +  + +  +E   +++  +    Q  
Sbjct: 1324 KAKNALAHALQSARHDCDLLREQYEEETEAKAELQRVLSKANSEVAQWRTKYETDAIQRT 1383

Query: 514  EEIKVKAKIEAQK 552
            EE++   K  AQ+
Sbjct: 1384 EELEEAKKKLAQR 1396

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>BFSP1_HUMAN (Q12934) Filensin (Beaded filament structural protein 1) (Lens|
           fiber cell beaded-filament structural protein CP 115)
           (CP115) (Lens intermediate filament-like heavy) (LIFL-H)
          Length = 665

 Score = 30.4 bits (67), Expect = 3.5
 Identities = 17/38 (44%), Positives = 21/38 (55%)
 Frame = +1

Query: 316 LDQIGDQIMERLDSKMQSYEETAEMQRQEIEMNERVLE 429
           L+Q      E  D ++Q Y E  E  R+EIE  ERVLE
Sbjct: 249 LEQAIKSAHECYDDEIQLYNEQIETLRKEIEETERVLE 286

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>RPOD_HELPY (P55993) RNA polymerase sigma factor rpoD (Sigma-70)|
          Length = 671

 Score = 30.0 bits (66), Expect = 4.5
 Identities = 16/63 (25%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
 Frame = +1

Query: 358 KMQSYEETAEMQRQEIEMNERVLE--DFEDWIEEEKNEGMFFKSLGKVKKPQNNEEIKVK 531
           K++  EE  ++  +E+E     L+  DF +W   +    M+ + +G +K    +EEI++ 
Sbjct: 123 KIKKTEEKQKVLDEELEDGYDFLKEKDFLEWSRSDSPVRMYLREMGDIKLLSKDEEIELS 182

Query: 532 AKI 540
            +I
Sbjct: 183 KQI 185

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>MYH7_MESAU (P13540) Myosin heavy chain, cardiac muscle beta isoform (MyHC-beta)|
          Length = 1934

 Score = 30.0 bits (66), Expect = 4.5
 Identities = 25/133 (18%), Positives = 61/133 (45%), Gaps = 6/133 (4%)
 Frame = +1

Query: 172  EVLAKIAMLQTQKVRITNFLDERSAYLTKFTKDADTEFDMIGQNAMKELDQIGDQIMERL 351
            ++ ++ A LQT+   ++  LDE+ A +++ T+   T          ++L+ +  Q+ E +
Sbjct: 1271 DLTSQRAKLQTENGELSRQLDEKEALISQLTRGKLT--------YTQQLEDLKRQLEEEV 1322

Query: 352  DSK------MQSYEETAEMQRQEIEMNERVLEDFEDWIEEEKNEGMFFKSLGKVKKPQNN 513
             +K      +QS     ++ R++ E       + +  + +  +E   +++  +    Q  
Sbjct: 1323 KAKNTLAHALQSARHDCDLLREQYEEETEAKAELQCVLSKANSEVAQWRTKYETDAIQRT 1382

Query: 514  EEIKVKAKIEAQK 552
            EE++   K  AQ+
Sbjct: 1383 EELEEAKKKLAQR 1395

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>FRPA_NEIMC (P55126) Iron-regulated protein frpA|
          Length = 1115

 Score = 30.0 bits (66), Expect = 4.5
 Identities = 21/59 (35%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
 Frame = +1

Query: 262 TKDADTEFDMIGQNAMKELDQIGDQIMERLDSKMQSYEETAEMQRQEI-EMNE-RVLED 432
           TK AD  F   G  A+ ELD  GD I+   D+  Q+     ++ +  I + NE R LE+
Sbjct: 366 TKLADGSFAKHGYAALAELDSNGDNIINAADAAFQTLRVWQDLNQDGISQANELRTLEE 424

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>K2C4_RAT (Q6IG00) Keratin, type II cytoskeletal 4 (Cytokeratin-4) (CK-4)|
           (Keratin-4) (K4) (Type II keratin Kb4)
          Length = 536

 Score = 30.0 bits (66), Expect = 4.5
 Identities = 24/127 (18%), Positives = 59/127 (46%), Gaps = 4/127 (3%)
 Frame = +1

Query: 181 AKIAMLQTQKVRITNFLDERSAYLTKFTKDADTEFDMIGQNAM----KELDQIGDQIMER 348
           A+   ++T   +  +F+D +  +L +  K  +T+++++ Q       + LD   +  +  
Sbjct: 145 AEREQIKTLNNKFASFID-KVRFLEQQNKVLETKWNLLQQQTTTTSPRNLDPFFETYINA 203

Query: 349 LDSKMQSYEETAEMQRQEIEMNERVLEDFEDWIEEEKNEGMFFKSLGKVKKPQNNEEIKV 528
           L   + +        + E+++ +  +EDF+   EEE N+    ++   V K   +    +
Sbjct: 204 LRKNLDTLSNDKGRLQSELKLMQDSVEDFKTKYEEEINKRTAAENDFVVLKKDVDAAYMI 263

Query: 529 KAKIEAQ 549
           K ++EA+
Sbjct: 264 KVELEAK 270

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>FRPC_NEIMC (P55127) Iron-regulated protein frpC|
          Length = 1829

 Score = 30.0 bits (66), Expect = 4.5
 Identities = 21/59 (35%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
 Frame = +1

Query: 262 TKDADTEFDMIGQNAMKELDQIGDQIMERLDSKMQSYEETAEMQRQEI-EMNE-RVLED 432
           TK AD  F   G  A+ ELD  GD I+   D+  Q+     ++ +  I + NE R LE+
Sbjct: 480 TKLADGSFAKHGYAALAELDSNGDNIINAADAAFQTLRVWQDLNQDGISQANELRTLEE 538

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>FRPC_NEIMB (Q9JYV5) Iron-regulated protein frpC|
          Length = 1829

 Score = 30.0 bits (66), Expect = 4.5
 Identities = 21/59 (35%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
 Frame = +1

Query: 262 TKDADTEFDMIGQNAMKELDQIGDQIMERLDSKMQSYEETAEMQRQEI-EMNE-RVLED 432
           TK AD  F   G  A+ ELD  GD I+   D+  Q+     ++ +  I + NE R LE+
Sbjct: 480 TKLADGSFAKHGYAALAELDSNGDNIINAADAAFQTLRVWQDLNQDGISQANELRTLEE 538

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>DDX23_PONPY (Q5RC67) Probable ATP-dependent RNA helicase DDX23 (EC 3.6.1.-)|
           (DEAD box protein 23)
          Length = 820

 Score = 30.0 bits (66), Expect = 4.5
 Identities = 27/116 (23%), Positives = 56/116 (48%), Gaps = 18/116 (15%)
 Frame = +1

Query: 256 KFTKDADTEFDMIGQNAMKELDQIGDQ-------IMERLDSKMQSYEET---------AE 387
           K  KD D++ D        E D+ GD+        +E L +K ++ EE          AE
Sbjct: 117 KSRKDRDSKKD--------EEDEHGDKKPKAQPLSLEELLAKKKAEEEAEAKPKFLSKAE 168

Query: 388 MQRQEIEMNERVLEDFEDWIEEEKNEGMFFKSLGK--VKKPQNNEEIKVKAKIEAQ 549
            + + ++  ++ +E+ +  +EEE+ +   F+ LG+  ++ PQ  E  + + ++E +
Sbjct: 169 REAEALKRRQQEVEERQRMLEEERKKRKQFQDLGRKMLEDPQERERRERRERMERE 224

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>CASP8_MOUSE (O89110) Caspase-8 precursor (EC 3.4.22.-) (CASP-8) [Contains:|
           Caspase-8 subunit p18; Caspase-8 subunit p10]
          Length = 480

 Score = 30.0 bits (66), Expect = 4.5
 Identities = 13/45 (28%), Positives = 26/45 (57%)
 Frame = +1

Query: 289 MIGQNAMKELDQIGDQIMERLDSKMQSYEETAEMQRQEIEMNERV 423
           M+ +N ++ L  I DQ+ + L  K++ YE ++  +R  +E  E +
Sbjct: 151 MLAENNLETLKSICDQVNKSLLGKIEDYERSSTERRMSLEGREEL 195

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>TIG_BACHD (Q9K8F3) Trigger factor (TF)|
          Length = 431

 Score = 30.0 bits (66), Expect = 4.5
 Identities = 24/108 (22%), Positives = 47/108 (43%)
 Frame = +1

Query: 142 LPHGGDQRQQEVLAKIAMLQTQKVRITNFLDERSAYLTKFTKDADTEFDMIGQNAMKELD 321
           LP   D+  ++V  ++  L   K ++   L++  A+     K  DT      +NA  ++ 
Sbjct: 247 LPELDDEFAKDVDEEVESLDELKKKLREKLEKDRAHEADHEK-RDTLIQKASENATIDIP 305

Query: 322 QIGDQIMERLDSKMQSYEETAEMQRQEIEMNERVLEDFEDWIEEEKNE 465
           +    I   LD   Q +E+  +MQ   +EM  +     ++ + E+  E
Sbjct: 306 EA--MINTELDRMTQEFEQRLQMQGMNLEMYFQFSGQTQEQLREQMKE 351

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>RPOC_XANC5 (Q3BWZ0) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP|
           beta' subunit) (Transcriptase beta' chain) (RNA
           polymerase beta' subunit)
          Length = 1404

 Score = 30.0 bits (66), Expect = 4.5
 Identities = 11/35 (31%), Positives = 23/35 (65%)
 Frame = +1

Query: 445 IEEEKNEGMFFKSLGKVKKPQNNEEIKVKAKIEAQ 549
           +E +K EGM F +  +VK+  +N  +++ AK++ +
Sbjct: 517 LENKKGEGMVFANTSEVKRAYDNRVVELHAKVKVR 551

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>RPOC_XANAC (Q8PNS9) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP|
           beta' subunit) (Transcriptase beta' chain) (RNA
           polymerase beta' subunit)
          Length = 1404

 Score = 30.0 bits (66), Expect = 4.5
 Identities = 11/35 (31%), Positives = 23/35 (65%)
 Frame = +1

Query: 445 IEEEKNEGMFFKSLGKVKKPQNNEEIKVKAKIEAQ 549
           +E +K EGM F +  +VK+  +N  +++ AK++ +
Sbjct: 517 LENKKGEGMVFANTSEVKRAYDNRVVELHAKVKVR 551

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>DOCK1_MOUSE (Q8BUR4) Dedicator of cytokinesis protein 1 (180 kDa protein|
           downstream of CRK) (DOCK180) (Fragments)
          Length = 1027

 Score = 30.0 bits (66), Expect = 4.5
 Identities = 20/75 (26%), Positives = 38/75 (50%)
 Frame = +1

Query: 283 FDMIGQNAMKELDQIGDQIMERLDSKMQSYEETAEMQRQEIEMNERVLEDFEDWIEEEKN 462
           F    Q  +KE  Q+  +I+   D K + +EE   + ++  E  E  + D+E   E  K 
Sbjct: 426 FQATTQGQLKE--QLYQEIIHYFD-KGKMWEEAIALGKELAEQYETEMFDYEQLSELLKK 482

Query: 463 EGMFFKSLGKVKKPQ 507
           +  F++++ KV +P+
Sbjct: 483 QAQFYENIVKVIRPK 497

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>MYH10_MOUSE (Q61879) Myosin-10 (Myosin heavy chain, nonmuscle IIb) (Nonmuscle|
            myosin heavy chain IIb) (NMMHC II-b) (NMMHC-IIB)
            (Cellular myosin heavy chain, type B) (Nonmuscle myosin
            heavy chain-B) (NMMHC-B)
          Length = 1976

 Score = 30.0 bits (66), Expect = 4.5
 Identities = 27/133 (20%), Positives = 53/133 (39%)
 Frame = +1

Query: 154  GDQRQQEVLAKIAMLQTQKVRITNFLDERSAYLTKFTKDADTEFDMIGQNAMKELDQIGD 333
            GD+ + E+  K   LQ +   ++  L+E      KF KDA             +L    +
Sbjct: 1271 GDRLRVELAEKANKLQNELDNVSTLLEEAEKKGIKFAKDA--------AGLESQLQDTQE 1322

Query: 334  QIMERLDSKMQSYEETAEMQRQEIEMNERVLEDFEDWIEEEKNEGMFFKSLGKVKKPQNN 513
             + E    K+       +++ ++  + E+  E+ E     EK        L   KK  ++
Sbjct: 1323 LLQEETRQKLNLSSRIRQLEEEKNSLQEQQEEEEEARKNLEKQVLALQSQLADTKKKVDD 1382

Query: 514  EEIKVKAKIEAQK 552
            +   +++  EA+K
Sbjct: 1383 DLGTIESLEEAKK 1395

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>MYH7_RAT (P02564) Myosin heavy chain, cardiac muscle beta isoform (MyHC-beta)|
          Length = 1935

 Score = 30.0 bits (66), Expect = 4.5
 Identities = 25/127 (19%), Positives = 57/127 (44%), Gaps = 6/127 (4%)
 Frame = +1

Query: 190  AMLQTQKVRITNFLDERSAYLTKFTKDADTEFDMIGQNAMKELDQIGDQIMERLDSK--- 360
            A LQT+   ++  LDE+ A +++ T+   T          ++L+ +  Q+ E + +K   
Sbjct: 1278 AKLQTENGELSRQLDEKEALISQLTRGKLT--------YTQQLEDLKRQLEEEVKAKNAL 1329

Query: 361  ---MQSYEETAEMQRQEIEMNERVLEDFEDWIEEEKNEGMFFKSLGKVKKPQNNEEIKVK 531
               +QS     ++ R++ E       + +  + +  +E   +++  +    Q  EE++  
Sbjct: 1330 AHALQSARHDCDLLREQYEEETEAKAELQRVLSKANSEVAQWRTKYETDAIQRTEELEEA 1389

Query: 532  AKIEAQK 552
             K  AQ+
Sbjct: 1390 KKKLAQR 1396

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>TRIPB_HUMAN (Q15643) Thyroid receptor-interacting protein 11 (TRIP-11)|
           (Golgi-associated microtubule-binding protein 210)
           (GMAP-210) (Trip230) (Clonal evolution related gene on
           chromosome 14)
          Length = 1979

 Score = 30.0 bits (66), Expect = 4.5
 Identities = 18/85 (21%), Positives = 40/85 (47%)
 Frame = +1

Query: 298 QNAMKELDQIGDQIMERLDSKMQSYEETAEMQRQEIEMNERVLEDFEDWIEEEKNEGMFF 477
           QN  +E+D    ++    ++  Q   E +   R+E+   E  +E+ E+ + ++   G+  
Sbjct: 223 QNRSQEIDDHQHEMSVLQNAHQQKLTEISRRHREELSDYEERIEELENLL-QQGGSGVIE 281

Query: 478 KSLGKVKKPQNNEEIKVKAKIEAQK 552
             L K+ + Q   ++    K+E+ K
Sbjct: 282 TDLSKIYEMQKTIQVLQIEKVESTK 306

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>RPOC_XANOR (Q8KTH8) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP|
           beta' subunit) (Transcriptase beta' chain) (RNA
           polymerase beta' subunit)
          Length = 1405

 Score = 30.0 bits (66), Expect = 4.5
 Identities = 11/35 (31%), Positives = 23/35 (65%)
 Frame = +1

Query: 445 IEEEKNEGMFFKSLGKVKKPQNNEEIKVKAKIEAQ 549
           +E +K EGM F +  +VK+  +N  +++ AK++ +
Sbjct: 517 LENKKGEGMVFANTSEVKRAYDNRVVELHAKVKVR 551

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>RPOC_XANCP (Q8PC55) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP|
           beta' subunit) (Transcriptase beta' chain) (RNA
           polymerase beta' subunit)
          Length = 1405

 Score = 30.0 bits (66), Expect = 4.5
 Identities = 11/35 (31%), Positives = 23/35 (65%)
 Frame = +1

Query: 445 IEEEKNEGMFFKSLGKVKKPQNNEEIKVKAKIEAQ 549
           +E +K EGM F +  +VK+  +N  +++ AK++ +
Sbjct: 517 LENKKGEGMVFANTSEVKRAYDNRVVELHAKVKVR 551

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>RPOC_XANC8 (Q4URD3) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP|
           beta' subunit) (Transcriptase beta' chain) (RNA
           polymerase beta' subunit)
          Length = 1405

 Score = 30.0 bits (66), Expect = 4.5
 Identities = 11/35 (31%), Positives = 23/35 (65%)
 Frame = +1

Query: 445 IEEEKNEGMFFKSLGKVKKPQNNEEIKVKAKIEAQ 549
           +E +K EGM F +  +VK+  +N  +++ AK++ +
Sbjct: 517 LENKKGEGMVFANTSEVKRAYDNRVVELHAKVKVR 551

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>TCF8_HUMAN (P37275) Transcription factor 8 (NIL-2-A zinc finger protein)|
            (Negative regulator of IL2)
          Length = 1124

 Score = 29.6 bits (65), Expect = 5.9
 Identities = 32/137 (23%), Positives = 59/137 (43%), Gaps = 1/137 (0%)
 Frame = +1

Query: 91   RFSICKSSSEDAGSDAPLPHGGDQRQQE-VLAKIAMLQTQKVRITNFLDERSAYLTKFTK 267
            R+S CK  +E+  S      G +    E V A+ +  Q          DER +   +  +
Sbjct: 982  RYSYCKREAEERDSTEQEEAGPEILSNEHVGARASPSQGDS-------DERESLTREEDE 1034

Query: 268  DADTEFDMIGQNAMKELDQIGDQIMERLDSKMQSYEETAEMQRQEIEMNERVLEDFEDWI 447
            D++ E +        E D+  +++ E  + +    +E  E + +E+E         E+ +
Sbjct: 1035 DSEKEEE--------EEDKEMEELQEEKECEKPQGDEEEEEEEEEVE---------EEEV 1077

Query: 448  EEEKNEGMFFKSLGKVK 498
            EE +NEG   K+ G +K
Sbjct: 1078 EEAENEGEEAKTEGLMK 1094

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>SMI2_DEBHA (Q6BJY4) KNR4/SMI1 homolog 2|
          Length = 590

 Score = 29.6 bits (65), Expect = 5.9
 Identities = 22/81 (27%), Positives = 42/81 (51%)
 Frame = +1

Query: 310 KELDQIGDQIMERLDSKMQSYEETAEMQRQEIEMNERVLEDFEDWIEEEKNEGMFFKSLG 489
           K+ D+I ++  E +++  +  ++  E + QE E  +    + E+  E+E+NE    K L 
Sbjct: 495 KQKDEIIEEKPEVIETPAKEDDKEEEEEEQEEEKEQEKEHENEEAPEDEQNEDA--KPLT 552

Query: 490 KVKKPQNNEEIKVKAKIEAQK 552
           K +K   N+  K K + + QK
Sbjct: 553 KTQK--KNQSKKAKKQQQKQK 571

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>SMC2_HUMAN (O95347) Structural maintenance of chromosome 2-like 1 protein|
           (Chromosome-associated protein E) (hCAP-E) (XCAP-E
           homolog)
          Length = 1197

 Score = 29.6 bits (65), Expect = 5.9
 Identities = 30/127 (23%), Positives = 58/127 (45%), Gaps = 18/127 (14%)
 Frame = +1

Query: 160 QRQQEVLAKIAMLQTQKVR--ITNFLDERSAYLTKFTKDADTEFDMIGQNAMKELDQ--- 324
           ++++  L +I  +  +++   I    +ERS+YL               Q  M+E++    
Sbjct: 186 EKKEAKLKEIKTILEEEITPTIQKLKEERSSYLEY-------------QKVMREIEHLSR 232

Query: 325 --IGDQIMERLDSKMQSYEETAEMQ------RQEIEMNERVLEDFEDWIEE-----EKNE 465
             I  Q +   D+K++S EE  EMQ      ++E+  N++ ++     IEE     +K  
Sbjct: 233 LYIAYQFLLAEDTKVRSAEELKEMQDKVIKLQEELSENDKKIKALNHEIEELEKRKDKET 292

Query: 466 GMFFKSL 486
           G+  +SL
Sbjct: 293 GVILRSL 299

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>TIG_STAES (Q8CNY4) Trigger factor (TF)|
          Length = 433

 Score = 29.6 bits (65), Expect = 5.9
 Identities = 32/121 (26%), Positives = 55/121 (45%)
 Frame = +1

Query: 190 AMLQTQKVRITNFLDERSAYLTKFTKDADTEFDMIGQNAMKELDQIGDQIMERLDSKMQS 369
           AM+ T+  R+     +R   + +   D  T + + GQN  +  DQ+ D   +R+ + +  
Sbjct: 307 AMINTELDRMIQEFGQR---IQQQGLDLQTYYQISGQNEEQLRDQMKDDAEQRVKTNLTL 363

Query: 370 YEETAEMQRQEIEMNERVLEDFEDWIEEEKNEGMFFKSLGKVKKPQNNEEIKVKAKIEAQ 549
              TA    + IE+++   ED +   E EK    F  S+  +K    N +I VK  +  Q
Sbjct: 364 ---TAIADEENIEVSD---EDIDK--ELEKMSEQFNISVEDIKSTLGNTDI-VKNDVRIQ 414

Query: 550 K 552
           K
Sbjct: 415 K 415

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>TIG_STAEQ (Q5HNM8) Trigger factor (TF)|
          Length = 433

 Score = 29.6 bits (65), Expect = 5.9
 Identities = 32/121 (26%), Positives = 55/121 (45%)
 Frame = +1

Query: 190 AMLQTQKVRITNFLDERSAYLTKFTKDADTEFDMIGQNAMKELDQIGDQIMERLDSKMQS 369
           AM+ T+  R+     +R   + +   D  T + + GQN  +  DQ+ D   +R+ + +  
Sbjct: 307 AMINTELDRMIQEFGQR---IQQQGLDLQTYYQISGQNEEQLRDQMKDDAEQRVKTNLTL 363

Query: 370 YEETAEMQRQEIEMNERVLEDFEDWIEEEKNEGMFFKSLGKVKKPQNNEEIKVKAKIEAQ 549
              TA    + IE+++   ED +   E EK    F  S+  +K    N +I VK  +  Q
Sbjct: 364 ---TAIADEENIEVSD---EDIDK--ELEKMSEQFNISVEDIKSTLGNTDI-VKNDVRIQ 414

Query: 550 K 552
           K
Sbjct: 415 K 415

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>PCLO_CHICK (Q9PU36) Protein piccolo (Aczonin) (Fragment)|
          Length = 5120

 Score = 29.6 bits (65), Expect = 5.9
 Identities = 19/103 (18%), Positives = 52/103 (50%), Gaps = 4/103 (3%)
 Frame = +1

Query: 163  RQQEVLAKIAMLQTQKVRITNFLDERSAYLTKFTKDADTEFDMIGQNAMKELDQIGDQIM 342
            +QQ++  +  +L+ +K++   F +E      +  +  + E  M+ Q  ++EL  +   ++
Sbjct: 3119 KQQQLDLERELLELEKIKQQRFAEELEWERQEIQRFREQEKFMV-QKKLEELQSMKHHLL 3177

Query: 343  ERLDSKMQSY----EETAEMQRQEIEMNERVLEDFEDWIEEEK 459
             + + + Q+     +ET   Q+ ++E  +++ +     +EE+K
Sbjct: 3178 FQQEEERQAQYMMRQETLAQQQLQLEQFQQLQQQLHQQLEEQK 3220

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>TACC3_HUMAN (Q9Y6A5) Transforming acidic coiled-coil-containing protein 3|
           (ERIC-1)
          Length = 838

 Score = 29.6 bits (65), Expect = 5.9
 Identities = 25/91 (27%), Positives = 45/91 (49%), Gaps = 7/91 (7%)
 Frame = +1

Query: 298 QNAMKELDQIGDQI--MER----LDSKMQSYEETAEMQRQEIEMNERVLEDFEDWIEEEK 459
           Q  +KE DQ+   +  ME+    L  + +  +E  E  R+  E  ++ +ED+   I +E 
Sbjct: 702 QKVLKEKDQLTTDLNSMEKSFSDLFKRFEKQKEVIEGYRKNEESLKKCVEDYLARITQEG 761

Query: 460 NEGMFFKSLGKVKKPQNNEEI-KVKAKIEAQ 549
                 K+  + K    NEEI +V++K +A+
Sbjct: 762 QRYQALKAHAEEKLQLANEEIAQVRSKAQAE 792

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>MYH10_RAT (Q9JLT0) Myosin-10 (Myosin heavy chain, nonmuscle IIb) (Nonmuscle|
            myosin heavy chain IIb) (NMMHC II-b) (NMMHC-IIB)
            (Cellular myosin heavy chain, type B) (Nonmuscle myosin
            heavy chain-B) (NMMHC-B)
          Length = 1976

 Score = 29.6 bits (65), Expect = 5.9
 Identities = 31/133 (23%), Positives = 53/133 (39%), Gaps = 1/133 (0%)
 Frame = +1

Query: 154  GDQRQQEVLAKIAMLQTQKVRITNFLDERSAYLTKFTKDADTEFDMIGQNAMKELDQIGD 333
            GD+ + E+  K   LQ +   ++  L+E      KF KDA                    
Sbjct: 1271 GDRLRVELAEKANKLQNELDNVSTLLEEAEKKGMKFAKDA-------------------- 1310

Query: 334  QIMERLDSKMQSYEE-TAEMQRQEIEMNERVLEDFEDWIEEEKNEGMFFKSLGKVKKPQN 510
                 L+S++Q  +E   E  RQ++ ++ R+ +     +EEEKN            + Q 
Sbjct: 1311 ---AGLESQLQDTQELLQEETRQKLNLSSRIRQ-----LEEEKNS----------LQEQQ 1352

Query: 511  NEEIKVKAKIEAQ 549
             EE + +  +E Q
Sbjct: 1353 EEEEEARKNLEKQ 1365

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>IF2P_PYRAB (Q9UZK7) Probable translation initiation factor IF-2 [Contains: Pab|
            infB intein (Pab IF2 intein)]
          Length = 992

 Score = 29.6 bits (65), Expect = 5.9
 Identities = 27/128 (21%), Positives = 60/128 (46%), Gaps = 18/128 (14%)
 Frame = +1

Query: 136  APLPHGGDQRQQEVLAKI--AMLQTQKVRI-------------TNFLDERSAYLTKFTKD 270
            AP P   ++ +QE+L +I   ++ T KV +             +  L E+   + K    
Sbjct: 723  APTPEDVEKAKQEILEQIERVVISTDKVGVIVKADTLGSLEALSKELQEKEIPIRKADVG 782

Query: 271  ADTEFDMIGQNAMKELDQIGDQIMERLDSKMQSYEETAEMQRQEIEMNE---RVLEDFED 441
              ++ D++   ++KE +     I+       +  EE A+ +  +I +     +++ED+E+
Sbjct: 783  NVSKTDVMEALSVKEEEPKYGVILGFNVKVNEDAEEVAKAKDVKIFVGNVIYKLIEDYEE 842

Query: 442  WIEEEKNE 465
            W++EE+ +
Sbjct: 843  WVKEEEEK 850

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>DMD_PIG (Q5GN48) Dystrophin|
          Length = 3674

 Score = 29.6 bits (65), Expect = 5.9
 Identities = 25/106 (23%), Positives = 45/106 (42%), Gaps = 17/106 (16%)
 Frame = +1

Query: 265  KDADTEFDMIGQN--AMKELDQIGDQIMERLDSKMQSYEETAEMQRQEIEMN-------- 414
            K+ D   DM   N   +KEL Q GD + +R+  + +  E   + Q  + + N        
Sbjct: 1804 KEEDFNKDMSEDNEGTVKELLQRGDNLQQRITDERKREEIKIKQQLLQTKHNALKDLRSQ 1863

Query: 415  --ERVLEDFEDWIEEEKNEGMFFKSLGKVKK-----PQNNEEIKVK 531
              ++ LE    W + ++      K L  ++K     P+  +E K+K
Sbjct: 1864 RRKKALEISHQWYQYKRQADDLLKCLDDIEKKLASLPEPQDEKKIK 1909

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>Y164_METJA (Q57628) Hypothetical protein MJ0164|
          Length = 395

 Score = 29.6 bits (65), Expect = 5.9
 Identities = 31/132 (23%), Positives = 53/132 (40%), Gaps = 34/132 (25%)
 Frame = +1

Query: 250 LTKFTKDADTEFDMIGQNA------------MKELDQIGDQIMERLDS--------KMQS 369
           L +  KD +T  D+   N             MK LD+  ++  E+ DS          + 
Sbjct: 208 LEEMLKDENTVIDVYEYNEKKTHVILELYPQMKILDENENKSSEKADSLESEGSITTAEE 267

Query: 370 YEETAEMQRQEIEMNERVLEDFEDWIE--------------EEKNEGMFFKSLGKVKKPQ 507
            EE + + R+E+     + E  E+WIE              EE  E +  + + KVK+ +
Sbjct: 268 IEEESTVSREELLKKLGIKEPDENWIETILEDVFRPSDEELEELKEKIESEIVNKVKRME 327

Query: 508 NNEEIKVKAKIE 543
              ++ V  KI+
Sbjct: 328 GVSDVLVNLKIK 339

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>Y111_ENCCU (Q8STB5) Hypothetical protein ECU01_0110/ECU01_1500/ECU08_0040|
          Length = 592

 Score = 29.6 bits (65), Expect = 5.9
 Identities = 13/49 (26%), Positives = 28/49 (57%), Gaps = 5/49 (10%)
 Frame = +1

Query: 310 KELDQIGDQIMERLDSKMQSY-----EETAEMQRQEIEMNERVLEDFED 441
           +++ + G+ ++  +DSKM+S      EE  E  R ++  +++ +E F D
Sbjct: 147 RQMARYGESLIREIDSKMESMPSEMSEEEKEKMRSDLNDDKKYVESFRD 195

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>GIDA_BACHK (Q6HAF3) tRNA uridine 5-carboxymethylaminomethyl modification|
           enzyme gidA (Glucose-inhibited division protein A)
          Length = 629

 Score = 29.6 bits (65), Expect = 5.9
 Identities = 27/113 (23%), Positives = 51/113 (45%)
 Frame = +1

Query: 205 QKVRITNFLDERSAYLTKFTKDADTEFDMIGQNAMKELDQIGDQIMERLDSKMQSYEETA 384
           +K++I    +  S+ + K   +       IG + +K+    G +  + L     +YE   
Sbjct: 469 KKLQIEQEKERLSSIIIKPRPEVQELIRNIGGSELKD----GIRASDLLRRPEMTYEHIH 524

Query: 385 EMQRQEIEMNERVLEDFEDWIEEEKNEGMFFKSLGKVKKPQNNEEIKVKAKIE 543
            +   E+E+++ V E  E  I   K EG   KSL +V++ +  E  K+   I+
Sbjct: 525 LLVPSEVELSDEVKEQVEIQI---KYEGYIEKSLQQVERMKKMENKKIPVDID 574

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>GIDA_BACAN (Q81JH3) tRNA uridine 5-carboxymethylaminomethyl modification|
           enzyme gidA (Glucose-inhibited division protein A)
          Length = 629

 Score = 29.6 bits (65), Expect = 5.9
 Identities = 27/113 (23%), Positives = 51/113 (45%)
 Frame = +1

Query: 205 QKVRITNFLDERSAYLTKFTKDADTEFDMIGQNAMKELDQIGDQIMERLDSKMQSYEETA 384
           +K++I    +  S+ + K   +       IG + +K+    G +  + L     +YE   
Sbjct: 469 KKLQIEQEKERLSSIIIKPRPEVQELIRNIGGSELKD----GIRASDLLRRPEMTYEHIH 524

Query: 385 EMQRQEIEMNERVLEDFEDWIEEEKNEGMFFKSLGKVKKPQNNEEIKVKAKIE 543
            +   E+E+++ V E  E  I   K EG   KSL +V++ +  E  K+   I+
Sbjct: 525 LLVPSEVELSDEVKEQVEIQI---KYEGYIEKSLQQVERMKKMENKKIPVDID 574

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>DOCK1_HUMAN (Q14185) Dedicator of cytokinesis protein 1 (180 kDa protein|
            downstream of CRK) (DOCK180)
          Length = 1865

 Score = 29.6 bits (65), Expect = 5.9
 Identities = 19/70 (27%), Positives = 37/70 (52%)
 Frame = +1

Query: 298  QNAMKELDQIGDQIMERLDSKMQSYEETAEMQRQEIEMNERVLEDFEDWIEEEKNEGMFF 477
            Q  +KE  Q+  +I+   D K + +EE   + ++  E  E  + D+E   E  K +  F+
Sbjct: 1269 QGQLKE--QLYQEIIHYFD-KGKMWEEAIALGKELAEQYENEMFDYEQLSELLKKQAQFY 1325

Query: 478  KSLGKVKKPQ 507
            +++ KV +P+
Sbjct: 1326 ENIVKVIRPK 1335

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>DMD_CANFA (O97592) Dystrophin|
          Length = 3680

 Score = 29.6 bits (65), Expect = 5.9
 Identities = 25/106 (23%), Positives = 45/106 (42%), Gaps = 17/106 (16%)
 Frame = +1

Query: 265  KDADTEFDMIGQN--AMKELDQIGDQIMERLDSKMQSYEETAEMQRQEIEMN-------- 414
            K+ D   DM   N   +KEL Q GD + +R+  + +  E   + Q  + + N        
Sbjct: 1810 KEEDFNKDMSEDNEGTVKELLQRGDNLQQRITDERKREEIKIKQQLLQTKHNALKDLRSQ 1869

Query: 415  --ERVLEDFEDWIEEEKNEGMFFKSLGKVKK-----PQNNEEIKVK 531
              ++ LE    W + ++      K L  ++K     P+  +E K+K
Sbjct: 1870 RRKKALEISHQWYQYKRQADDLLKCLDDIEKKLASLPEPRDERKIK 1915

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>RAD50_MOUSE (P70388) DNA repair protein RAD50 (EC 3.6.-.-) (mRad50)|
          Length = 1312

 Score = 29.3 bits (64), Expect = 7.8
 Identities = 32/135 (23%), Positives = 61/135 (45%), Gaps = 2/135 (1%)
 Frame = +1

Query: 148 HGGDQRQQEVLAKIAMLQTQKVRI--TNFLDERSAYLTKFTKDADTEFDMIGQNAMKELD 321
           H   + Q E+L K    + +++R   +   DE ++ L  F      E D +   + KE++
Sbjct: 531 HTTTRTQMEMLTKDKTDKDEQIRKIKSRHSDELTSLLGYFPNKKQLE-DWLHSKS-KEIN 588

Query: 322 QIGDQIMERLDSKMQSYEETAEMQRQEIEMNERVLEDFEDWIEEEKNEGMFFKSLGKVKK 501
           Q  D++  +L+ ++ S E+       E++  E  L  +ED + +          LG++K 
Sbjct: 589 QTRDRLA-KLNKELASAEQNKNHINNELKKKEEQLSSYEDKLFDVCGSQDLESDLGRLK- 646

Query: 502 PQNNEEIKVKAKIEA 546
               EEI+  +K  A
Sbjct: 647 ----EEIEKSSKQRA 657

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>K0494_HUMAN (O75071) Protein KIAA0494|
          Length = 495

 Score = 29.3 bits (64), Expect = 7.8
 Identities = 20/75 (26%), Positives = 37/75 (49%), Gaps = 1/75 (1%)
 Frame = +1

Query: 202 TQKVRITNFLDERSAYLTKFTKDADTEFDMIGQNAMKELDQIGDQIMERLDS-KMQSYEE 378
           TQ+V   N ++     ++K  K A+  F M+G  +     Q  DQ+  R D+ K+QS ++
Sbjct: 303 TQRV---NLIESDVVAMSKVEKKANLSFSMMGDRSATLKRQSLDQVTNRTDTVKIQSIKK 359

Query: 379 TAEMQRQEIEMNERV 423
                 Q  ++ E++
Sbjct: 360 EDSSNSQVSKLREKL 374

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>HTPG_IDILO (Q5QWR2) Chaperone protein htpG (Heat shock protein htpG) (High|
           temperature protein G)
          Length = 637

 Score = 29.3 bits (64), Expect = 7.8
 Identities = 21/69 (30%), Positives = 38/69 (55%), Gaps = 4/69 (5%)
 Frame = +1

Query: 337 IMERLDSKMQSY-EETAEMQRQEI---EMNERVLEDFEDWIEEEKNEGMFFKSLGKVKKP 504
           + ER+D  + S+  E  E Q Q +   +++   L+D ED  E+EK E  F ++L + +K 
Sbjct: 472 LSERIDEWLMSHLTEFKEKQLQSVTRGDLDLGELDDEEDKAEQEKAEEAFKENLERFEKA 531

Query: 505 QNNEEIKVK 531
             ++  KV+
Sbjct: 532 LGDKVKKVR 540

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>PGK_ANASP (Q8YPR1) Phosphoglycerate kinase (EC 2.7.2.3)|
          Length = 400

 Score = 29.3 bits (64), Expect = 7.8
 Identities = 19/67 (28%), Positives = 34/67 (50%)
 Frame = +1

Query: 286 DMIGQNAMKELDQIGDQIMERLDSKMQSYEETAEMQRQEIEMNERVLEDFEDWIEEEKNE 465
           +++GQ  +K  D IGD++  ++          A +Q  ++     +LE+   + EEEKN+
Sbjct: 85  ELLGQEVIKTDDSIGDEVAAKV----------ATLQNGQV----LLLENVRFYKEEEKND 130

Query: 466 GMFFKSL 486
             F K L
Sbjct: 131 PEFAKKL 137

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>TOP2M_CAEEL (P34534) Putative DNA topoisomerase II, mitochondrial precursor (EC|
            5.99.1.3)
          Length = 1053

 Score = 29.3 bits (64), Expect = 7.8
 Identities = 19/80 (23%), Positives = 41/80 (51%)
 Frame = +1

Query: 283  FDMIGQNAMKELDQIGDQIMERLDSKMQSYEETAEMQRQEIEMNERVLEDFEDWIEEEKN 462
            FD  G+  +KE   I +   E  + +   YE+  ++Q++E E     +E+  ++IE   N
Sbjct: 898  FDRNGE--LKEFGNISEIAAEFFEVRRDLYEKRLKIQKEECEAKLIYVENQLNFIEMVTN 955

Query: 463  EGMFFKSLGKVKKPQNNEEI 522
              +  +S+G+ +  +  +E+
Sbjct: 956  GTIEIRSMGRNQLEEKLQEM 975

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>CCD37_MACFA (Q4R8V8) Coiled-coil domain-containing protein 37|
          Length = 608

 Score = 29.3 bits (64), Expect = 7.8
 Identities = 22/105 (20%), Positives = 49/105 (46%), Gaps = 7/105 (6%)
 Frame = +1

Query: 229 LDERSAYLTKFTKDADTEFDMIGQNAMKELDQIGDQIMERLDSKMQSYEETAEMQRQEIE 408
           L + +A   +F ++ D       + A KE     ++I+E  D   Q     +E+ R E  
Sbjct: 193 LAKDAALFDEFLRENDCSSVQAMKAAEKETKAKIEKILEIRDLTTQIVNIKSEISRFEDT 252

Query: 409 MNE-RVLEDF------EDWIEEEKNEGMFFKSLGKVKKPQNNEEI 522
           +   +V +DF      ++W+EE++ + +F K+  ++ +   +  +
Sbjct: 253 LQHYKVYKDFLYKLSPKEWLEEQEKKHLFLKNAKEISEASKDGSV 297

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>YJY1_SCHPO (Q9USN8) Hypothetical protein C132.01c in chromosome III|
          Length = 1021

 Score = 29.3 bits (64), Expect = 7.8
 Identities = 18/68 (26%), Positives = 34/68 (50%)
 Frame = +1

Query: 304 AMKELDQIGDQIMERLDSKMQSYEETAEMQRQEIEMNERVLEDFEDWIEEEKNEGMFFKS 483
           A + L+   +    +L S +Q  + T  ++ Q IEMN  ++E    +I    N+GM +  
Sbjct: 364 AERRLESAKEDQARKLQS-LQDAQATCALRAQAIEMNPELVEAIISYINSLLNQGMDWLD 422

Query: 484 LGKVKKPQ 507
           + K+ + Q
Sbjct: 423 IEKLIQSQ 430

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>DMD_HUMAN (P11532) Dystrophin|
          Length = 3685

 Score = 29.3 bits (64), Expect = 7.8
 Identities = 25/106 (23%), Positives = 45/106 (42%), Gaps = 17/106 (16%)
 Frame = +1

Query: 265  KDADTEFDMIGQN--AMKELDQIGDQIMERLDSKMQSYEETAEMQRQEIEMN-------- 414
            K+ D   DM   N   +KEL Q GD + +R+  + +  E   + Q  + + N        
Sbjct: 1808 KEEDFNKDMNEDNEGTVKELLQRGDNLQQRITDERKREEIKIKQQLLQTKHNALKDLRSQ 1867

Query: 415  --ERVLEDFEDWIEEEKNEGMFFKSLGKVKK-----PQNNEEIKVK 531
              ++ LE    W + ++      K L  ++K     P+  +E K+K
Sbjct: 1868 RRKKALEISHQWYQYKRQADDLLKCLDDIEKKLASLPEPRDERKIK 1913

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>MYH10_BOVIN (Q27991) Myosin-10 (Myosin heavy chain, nonmuscle IIb) (Nonmuscle|
            myosin heavy chain IIb) (NMMHC II-b) (NMMHC-IIB)
            (Cellular myosin heavy chain, type B) (Nonmuscle myosin
            heavy chain-B) (NMMHC-B)
          Length = 1976

 Score = 29.3 bits (64), Expect = 7.8
 Identities = 25/102 (24%), Positives = 49/102 (48%), Gaps = 10/102 (9%)
 Frame = +1

Query: 154  GDQRQQEVLAKIAMLQTQKVRITNFLDERSAYLTKFTKDA--------DTEFDMIGQNAM 309
            GD+ + E+  K   LQ +   ++  L+E      KF KDA        DT+ +++ +   
Sbjct: 1271 GDRLRVELAEKANKLQNELDNVSTLLEEAEKKGIKFAKDAAGLESQLQDTQ-ELLQEETR 1329

Query: 310  KELDQIGDQI--MERLDSKMQSYEETAEMQRQEIEMNERVLE 429
            ++L+ +  +I  +E   S +Q  +E  E  R+ +E   + L+
Sbjct: 1330 QKLN-LSSRIRQLEEERSSLQEQQEEEEEARRSLEKQLQALQ 1370

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>KCC4_RAT (P13234) Calcium/calmodulin-dependent protein kinase type IV (EC|
           2.7.11.17) (CAM kinase-GR) (CaMK IV) (Calspermin)
          Length = 474

 Score = 29.3 bits (64), Expect = 7.8
 Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 9/59 (15%)
 Frame = +1

Query: 322 QIGDQIMERLDSKMQS---------YEETAEMQRQEIEMNERVLEDFEDWIEEEKNEGM 471
           Q G    + L++KMQ+          +ET ++Q +E+E  E V E+ E+  EEE+   M
Sbjct: 359 QDGKDKTDPLENKMQAGDHEAAKAAADETMKLQSEEVEEEEGVKEEEEEEEEEEETSRM 417

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>RBP2_HUMAN (P49792) Ran-binding protein 2 (RanBP2) (Nuclear pore complex|
           protein Nup358) (Nucleoporin Nup358) (358 kDa
           nucleoporin) (P270)
          Length = 3224

 Score = 29.3 bits (64), Expect = 7.8
 Identities = 19/75 (25%), Positives = 36/75 (48%)
 Frame = +1

Query: 163 RQQEVLAKIAMLQTQKVRITNFLDERSAYLTKFTKDADTEFDMIGQNAMKELDQIGDQIM 342
           R+ E +   A+   ++    N+L +   YL K   D+D+   ++     K+L    + + 
Sbjct: 689 RKAEDIENDALSPEEQEECKNYLRKTRDYLIKIIDDSDSNLSVV-----KKLPVPLESVK 743

Query: 343 ERLDSKMQSYEETAE 387
           E L+S MQ  E+ +E
Sbjct: 744 EMLNSVMQELEDYSE 758

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>DNLI_YEAST (P04819) DNA ligase I, mitochondrial precursor (EC 6.5.1.1)|
           (Polydeoxyribonucleotide synthase [ATP])
          Length = 755

 Score = 29.3 bits (64), Expect = 7.8
 Identities = 22/89 (24%), Positives = 38/89 (42%), Gaps = 11/89 (12%)
 Frame = +1

Query: 217 ITNFLDERSAYLTKFTKDADTEFDMIGQNAMKELDQIG-----------DQIMERLDSKM 363
           I   L ER  YLTK TK    EF    Q     LD++            + +M ++    
Sbjct: 522 INKSLKERREYLTKVTKVVPGEFQYATQITTNNLDELQKFLDESVNHSCEGLMVKMLEGP 581

Query: 364 QSYEETAEMQRQEIEMNERVLEDFEDWIE 450
           +S+ E ++  R  +++ +  LE   D ++
Sbjct: 582 ESHYEPSKRSRNWLKLKKDYLEGVGDSLD 610


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.312    0.128    0.340 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 65,202,712
Number of Sequences: 219361
Number of extensions: 1145329
Number of successful extensions: 3897
Number of sequences better than 10.0: 98
Number of HSP's better than 10.0 without gapping: 3762
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3890
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4488201198
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)

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full-length cDNA and EST

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