>gb|AC139513.10| Mus musculus chromosome 15, clone RP23-151N6, complete sequence
          Length = 238980

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 13     gcgcccaggcccagcaggcacc 34
              ||||||||||||||||||||||
Sbjct: 237181 gcgcccaggcccagcaggcacc 237160

>gb|AC116764.10| Mus musculus chromosome 15, clone RP23-388P12, complete sequence
          Length = 217156

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 13     gcgcccaggcccagcaggcacc 34
              ||||||||||||||||||||||
Sbjct: 213844 gcgcccaggcccagcaggcacc 213865

>ref|XM_613631.2| PREDICTED: Bos taurus similar to Short transient receptor potential
           channel 7 (TrpC7) (TRP7 protein) (LOC540902), mRNA
          Length = 2912

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 134 gccggaggaggagctcttcctggac 158
           |||||||||||||| ||||||||||
Sbjct: 325 gccggaggaggagcgcttcctggac 349

>gb|AC148688.1| Macaca mulatta Major Histocompatibility Complex BAC MMU218K02, complete
             sequence
          Length = 182826

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 127   agaagctgccggaggaggagc 147
             |||||||||||||||||||||
Sbjct: 10157 agaagctgccggaggaggagc 10137

>gb|AC148679.1| Macaca mulatta Major Histocompatibility Complex BAC MMU125K24, complete
              sequence
          Length = 181659

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 127    agaagctgccggaggaggagc 147
              |||||||||||||||||||||
Sbjct: 176258 agaagctgccggaggaggagc 176238

>dbj|AB128049.1| Macaca mulatta genes, MHC class I region, partial and complete cds
          Length = 3284914

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 127   agaagctgccggaggaggagc 147
             |||||||||||||||||||||
Sbjct: 67914 agaagctgccggaggaggagc 67934

>emb|AJ937763.1| Uncultured bacterium fosmid clone b1dcf5.1.a06
          Length = 32219

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 433   attttccgtcaaaaactcatt 453
             |||||||||||||||||||||
Sbjct: 10819 attttccgtcaaaaactcatt 10839

>gb|AC022351.3| Drosophila melanogaster clone BACR29G15, complete sequence
          Length = 179396

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 316    cgagcaggccaatggccaga 335
              ||||||||||||||||||||
Sbjct: 158693 cgagcaggccaatggccaga 158712

>gb|AC146113.3| Pan troglodytes BAC clone RP43-5I6 from 7, complete sequence
          Length = 223155

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 559    ctactaaaggtagttattttatcc 582
              |||||||| |||||||||||||||
Sbjct: 164086 ctactaaaagtagttattttatcc 164063

>gb|CP000359.1| Deinococcus geothermalis DSM 11300, complete genome
          Length = 2467205

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 12      ggcgcccaggcccagcaggc 31
               ||||||||||||||||||||
Sbjct: 2261923 ggcgcccaggcccagcaggc 2261942

>ref|NM_173687.1| Homo sapiens chromosome 8 open reading frame 31 (C8orf31), mRNA
          Length = 1876

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 104 ggcaccccagggactcactaccaa 127
           ||||||||||||||||||| ||||
Sbjct: 557 ggcaccccagggactcactgccaa 580

>gb|AC123058.3| Mus musculus BAC clone RP23-188J8 from 19, complete sequence
          Length = 194636

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 414   cttgtgttgcgtgctttctatttt 437
             ||||||||| ||||||||||||||
Sbjct: 85609 cttgtgttgagtgctttctatttt 85586

>gb|BC063497.1| Homo sapiens chromosome 8 open reading frame 31, mRNA (cDNA clone
           IMAGE:5309478)
          Length = 985

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 104 ggcaccccagggactcactaccaa 127
           ||||||||||||||||||| ||||
Sbjct: 375 ggcaccccagggactcactgccaa 398

>emb|BX640441.1| Bordetella bronchiseptica strain RB50, complete genome; segment 5/16
          Length = 348624

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 14    cgcccaggcccagcaggcaccggc 37
             ||||||||||||||||| ||||||
Sbjct: 42534 cgcccaggcccagcaggtaccggc 42511

>emb|BX640426.1| Bordetella parapertussis strain 12822, complete genome; segment 4/14
          Length = 348866

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 14     cgcccaggcccagcaggcaccggc 37
              ||||||||||||||||| ||||||
Sbjct: 155815 cgcccaggcccagcaggtaccggc 155792

>gb|BC073830.1| Homo sapiens chromosome 8 open reading frame 31, mRNA (cDNA clone
           IMAGE:3454245), complete cds
          Length = 1216

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 104 ggcaccccagggactcactaccaa 127
           ||||||||||||||||||| ||||
Sbjct: 603 ggcaccccagggactcactgccaa 626

>emb|CR388362.8| Zebrafish DNA sequence from clone DKEY-176I20 in linkage group 16,
             complete sequence
          Length = 39233

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 365   gcactcaaaaaactttacca 384
             ||||||||||||||||||||
Sbjct: 25029 gcactcaaaaaactttacca 25048

>gb|AY118371.1| Drosophila melanogaster RE13854 full insert cDNA
          Length = 4550

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 316  cgagcaggccaatggccaga 335
            ||||||||||||||||||||
Sbjct: 1528 cgagcaggccaatggccaga 1547

>dbj|AK094450.1| Homo sapiens cDNA FLJ37131 fis, clone BRACE2023070
          Length = 1876

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 104 ggcaccccagggactcactaccaa 127
           ||||||||||||||||||| ||||
Sbjct: 557 ggcaccccagggactcactgccaa 580

>ref|NM_132912.1| Drosophila melanogaster methuselah-like 1 CG4521-RA (mthl1), mRNA
          Length = 4534

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 316  cgagcaggccaatggccaga 335
            ||||||||||||||||||||
Sbjct: 1529 cgagcaggccaatggccaga 1548

>gb|AC022350.2|AC022350 Drosophila melanogaster, chromosome X, region 15B-15B, BAC clone
             BACR18G21, complete sequence
          Length = 168514

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 316   cgagcaggccaatggccaga 335
             ||||||||||||||||||||
Sbjct: 20535 cgagcaggccaatggccaga 20554

>gb|AF323725.1|AF323725 Chlamydomonas reinhardtii PsaN precursor (psaN) gene, complete cds
          Length = 2190

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 10  agggcgcccaggcccagcag 29
           ||||||||||||||||||||
Sbjct: 544 agggcgcccaggcccagcag 525

>gb|AC083982.13| Homo sapiens chromosome 8, clone RP11-520P18, complete sequence
          Length = 173910

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 104   ggcaccccagggactcactaccaa 127
             ||||||||||||||||||| ||||
Sbjct: 55178 ggcaccccagggactcactgccaa 55201

>gb|AY691917.1| Uncultured bacterium clone KL20 unknown sequence
          Length = 3173

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 164  ccgctggacgaggaggcctcgaaa 187
            |||||| |||||||||||||||||
Sbjct: 2107 ccgctgaacgaggaggcctcgaaa 2084

>gb|AE003503.4| Drosophila melanogaster chromosome X, section 55 of 74 of the
            complete sequence
          Length = 300468

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 316  cgagcaggccaatggccaga 335
            ||||||||||||||||||||
Sbjct: 4974 cgagcaggccaatggccaga 4993


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,464,839
Number of Sequences: 3902068
Number of extensions: 5464839
Number of successful extensions: 112200
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 112106
Number of HSP's gapped (non-prelim): 94
length of query: 644
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 621
effective length of database: 17,143,297,704
effective search space: 10645987874184
effective search space used: 10645987874184
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)