ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal8m12
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK099819.1| Oryza sativa (japonica cultivar-group) cDNA clon... 190 4e-45
2dbj|AK062237.1| Oryza sativa (japonica cultivar-group) cDNA clon... 190 4e-45
3dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 176 6e-41
4dbj|AP003508.3| Oryza sativa (japonica cultivar-group) genomic D... 176 6e-41
5emb|AJ000237.1|HVJ000237 Hordeum vulgare mRNA for expressed sequ... 96 2e-16
6ref|XM_468236.1| Oryza sativa (japonica cultivar-group), mRNA 46 0.15
7dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.15
8dbj|AP004054.3| Oryza sativa (japonica cultivar-group) genomic D... 46 0.15
9dbj|AP005115.3| Oryza sativa (japonica cultivar-group) genomic D... 46 0.15
10gb|AC111115.13| Mus musculus chromosome 5, clone RP23-213H20, co... 42 2.3
11gb|AC129553.10| Mus musculus chromosome 5, clone RP24-351J24, co... 42 2.3
12gb|AC154138.11| Mus musculus 10 BAC RP23-124J6 (Roswell Park Can... 42 2.3
13gb|AC155642.6| Mus musculus 10 BAC RP24-117F24 (Roswell Park Can... 42 2.3
14gb|AC153851.27| Mus musculus 6 BAC RP23-61N4 (Roswell Park Cance... 40 9.0
15gb|AE000663.1|MMAE000663 Mus musculus TCR beta locus from bases ... 40 9.0
16gb|AC146536.3| Dasypus novemcinctus clone VMRC5-215B23, complete... 40 9.0
17gb|AC117940.3| Felis catus clone RP86-238N12, complete sequence 40 9.0
18gb|AC124725.3| Mus musculus BAC clone RP23-459F16 from chromosom... 40 9.0
19gb|AC144477.16| Medicago truncatula clone mth2-6k4, complete seq... 40 9.0
20gb|AC151744.23| Medicago truncatula clone mth2-32k10, complete s... 40 9.0
21emb|AL512655.17| Human DNA sequence from clone RP11-536C2 on chr... 40 9.0
22emb|AL392043.21| Human DNA sequence from clone RP11-288G11 on ch... 40 9.0
23emb|AL023775.1|HS497J21 Human DNA sequence from clone RP3-497J21... 40 9.0
24gb|AC022046.11| Homo sapiens chromosome , clone RP11-13L22, comp... 40 9.0
25gb|AC096947.2| Homo sapiens chromosome 1 clone RP4-802A10, compl... 40 9.0
26ref|XM_694738.1| PREDICTED: Danio rerio similar to bloodthirsty ... 40 9.0
27gb|AC008952.7| Homo sapiens chromosome 5 clone CTD-2337D22, comp... 40 9.0
28gb|AC008838.6| Homo sapiens chromosome 5 clone CTD-2151B15, comp... 40 9.0
29gb|AC008836.6|AC008836 Homo sapiens chromosome 5 clone CTD-2150D... 40 9.0
30gb|AC022203.4|AC022203 Homo sapiens BAC clone RP11-490K15 from 1... 40 9.0
31gb|AC016908.5| Homo sapiens BAC clone RP11-457D4 from 2, complet... 40 9.0
32gb|AC171276.3| Pan troglodytes BAC clone CH251-740N2 from chromo... 40 9.0
33emb|AL845354.13| Mouse DNA sequence from clone RP23-318L10 on ch... 40 9.0
34gb|AC158942.7| Mus musculus chromosome 5, clone RP23-240A11, com... 40 9.0
35gb|AC161768.25| Mus musculus 6 BAC RP23-37C14 (Roswell Park Canc... 40 9.0 
>dbj|AK099819.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013100I11, full
            insert sequence
          Length = 3733

 Score =  190 bits (96), Expect = 4e-45
 Identities = 239/286 (83%), Gaps = 3/286 (1%)
 Strand = Plus / Plus

                                                                        
Query: 4    ggtggccaagcaagtatgaacaggcatcatttcttgcagtgccctacaaccttgttaggc 63
            ||||||||||||||||||||||||   |||||  | ||||||||| ||| ||||||  ||
Sbjct: 2503 ggtggccaagcaagtatgaacaggaggcattttctacagtgcccttcaagcttgttgagc 2562

                                                                        
Query: 64   aagaattttgaaaagcttgtccagtgtgatcagaggctacaccagttgagtcaacagaca 123
            || || |||||||||||| |||||||||||||| ||||| |||| |||||||| ||  ||
Sbjct: 2563 aaaaactttgaaaagcttctccagtgtgatcagcggctaaaccaattgagtcagcaacca 2622

                                                                        
Query: 124  gatgtcatcttggactcttcagtttttgaacccagatgctctatatttgaggatccggtg 183
            ||  |||| ||||||||| | |||||||||||||||||||||||||||||||| || || 
Sbjct: 2623 gacatcatattggactctcccgtttttgaacccagatgctctatatttgaggacccagtt 2682

                                                                        
Query: 184  gaattgaagtgccatgactttgctaatttaaaagatgaacgtgaagatctgcctgggttt 243
            |||| ||||||||| |  ||| ||||||| || || |||| ||||    |  ||||||||
Sbjct: 2683 gaatcgaagtgccaaggttttactaatttgaaggacgaacatgaa---ttatctgggttt 2739

                                                          
Query: 244  tcagggtctgtgtcaccatgtgctggttcatctatgtctactaaga 289
            ||||| ||| ||||||| |||||||||||||| |||||| ||||||
Sbjct: 2740 tcaggttctctgtcaccctgtgctggttcatccatgtctgctaaga 2785



 Score =  176 bits (89), Expect = 6e-41
 Identities = 202/239 (84%), Gaps = 3/239 (1%)
 Strand = Plus / Plus

                                                                        
Query: 375  agtcagcagaaacgtaaatggtgtagctcaagaattcaatatcccaaactggtggagtca 434
            |||||||||||||||||||||||   ||| ||| || |||||||| | ||||||||||||
Sbjct: 2871 agtcagcagaaacgtaaatggtg---ctccagagttaaatatccccagctggtggagtca 2927

                                                                        
Query: 435  actgaaagtgcccgggcttagaccatcaatgtcagtggatgatttggtcagccacctagg 494
            |||||||||||| ||||||||||| || |||||||||||||||||||| | |||| | ||
Sbjct: 2928 actgaaagtgcctgggcttagaccgtctatgtcagtggatgatttggtaaaccacttggg 2987

                                                                        
Query: 495  aaattgcatcagcgagcagatcacttcaggcaatccttctatggccaacaatgtggtgcc 554
            ||| ||||||   ||||||||||| |||| ||||||| |  || ||| ||| | ||||||
Sbjct: 2988 aaactgcatctcggagcagatcacatcagtcaatcctacattgcccagcaacgaggtgcc 3047

                                                                       
Query: 555  tacaaaagaatcgctagaggagattgcacagtaccttcttggcgacgcacagggcccac 613
             ||||||||| | || |||||||| || ||||||||||| || || |||||||||||||
Sbjct: 3048 aacaaaagaaacactggaggagatcgctcagtaccttctcggagatgcacagggcccac 3106
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>dbj|AK062237.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-047-E04, full
           insert sequence
          Length = 1490

 Score =  190 bits (96), Expect = 4e-45
 Identities = 239/286 (83%), Gaps = 3/286 (1%)
 Strand = Plus / Plus

                                                                       
Query: 4   ggtggccaagcaagtatgaacaggcatcatttcttgcagtgccctacaaccttgttaggc 63
           ||||||||||||||||||||||||   |||||  | ||||||||| ||| ||||||  ||
Sbjct: 260 ggtggccaagcaagtatgaacaggaggcattttctacagtgcccttcaagcttgttgagc 319

                                                                       
Query: 64  aagaattttgaaaagcttgtccagtgtgatcagaggctacaccagttgagtcaacagaca 123
           || || |||||||||||| |||||||||||||| ||||| |||| |||||||| ||  ||
Sbjct: 320 aaaaactttgaaaagcttctccagtgtgatcagcggctaaaccaattgagtcagcaacca 379

                                                                       
Query: 124 gatgtcatcttggactcttcagtttttgaacccagatgctctatatttgaggatccggtg 183
           ||  |||| ||||||||| | |||||||||||||||||||||||||||||||| || || 
Sbjct: 380 gacatcatattggactctcccgtttttgaacccagatgctctatatttgaggacccagtt 439

                                                                       
Query: 184 gaattgaagtgccatgactttgctaatttaaaagatgaacgtgaagatctgcctgggttt 243
           |||| ||||||||| |  ||| ||||||| || || |||| ||||    |  ||||||||
Sbjct: 440 gaatcgaagtgccaaggttttactaatttgaaggacgaacatgaa---ttatctgggttt 496

                                                         
Query: 244 tcagggtctgtgtcaccatgtgctggttcatctatgtctactaaga 289
           ||||| ||| ||||||| |||||||||||||| |||||| ||||||
Sbjct: 497 tcaggttctctgtcaccctgtgctggttcatccatgtctgctaaga 542



 Score =  176 bits (89), Expect = 6e-41
 Identities = 202/239 (84%), Gaps = 3/239 (1%)
 Strand = Plus / Plus

                                                                       
Query: 375 agtcagcagaaacgtaaatggtgtagctcaagaattcaatatcccaaactggtggagtca 434
           |||||||||||||||||||||||   ||| ||| || |||||||| | ||||||||||||
Sbjct: 628 agtcagcagaaacgtaaatggtg---ctccagagttaaatatccccagctggtggagtca 684

                                                                       
Query: 435 actgaaagtgcccgggcttagaccatcaatgtcagtggatgatttggtcagccacctagg 494
           |||||||||||| ||||||||||| || |||||||||||||||||||| | |||| | ||
Sbjct: 685 actgaaagtgcctgggcttagaccgtctatgtcagtggatgatttggtaaaccacttggg 744

                                                                       
Query: 495 aaattgcatcagcgagcagatcacttcaggcaatccttctatggccaacaatgtggtgcc 554
           ||| ||||||   ||||||||||| |||| ||||||| |  || ||| ||| | ||||||
Sbjct: 745 aaactgcatctcggagcagatcacatcagtcaatcctacattgcccagcaacgaggtgcc 804

                                                                      
Query: 555 tacaaaagaatcgctagaggagattgcacagtaccttcttggcgacgcacagggcccac 613
            ||||||||| | || |||||||| || ||||||||||| || || |||||||||||||
Sbjct: 805 aacaaaagaaacactggaggagatcgctcagtaccttctcggagatgcacagggcccac 863
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score =  176 bits (89), Expect = 6e-41
 Identities = 202/239 (84%), Gaps = 3/239 (1%)
 Strand = Plus / Minus

                                                                           
Query: 375     agtcagcagaaacgtaaatggtgtagctcaagaattcaatatcccaaactggtggagtca 434
               |||||||||||||||||||||||   ||| ||| || |||||||| | ||||||||||||
Sbjct: 4382679 agtcagcagaaacgtaaatggtg---ctccagagttaaatatccccagctggtggagtca 4382623

                                                                           
Query: 435     actgaaagtgcccgggcttagaccatcaatgtcagtggatgatttggtcagccacctagg 494
               |||||||||||| ||||||||||| || |||||||||||||||||||| | |||| | ||
Sbjct: 4382622 actgaaagtgcctgggcttagaccgtctatgtcagtggatgatttggtaaaccacttggg 4382563

                                                                           
Query: 495     aaattgcatcagcgagcagatcacttcaggcaatccttctatggccaacaatgtggtgcc 554
               ||| ||||||   ||||||||||| |||| ||||||| |  || ||| ||| | ||||||
Sbjct: 4382562 aaactgcatctcggagcagatcacatcagtcaatcctacattgcccagcaacgaggtgcc 4382503

                                                                          
Query: 555     tacaaaagaatcgctagaggagattgcacagtaccttcttggcgacgcacagggcccac 613
                ||||||||| | || |||||||| || ||||||||||| || || |||||||||||||
Sbjct: 4382502 aacaaaagaaacactggaggagatcgctcagtaccttctcggagatgcacagggcccac 4382444



 Score =  167 bits (84), Expect = 6e-38
 Identities = 209/250 (83%), Gaps = 3/250 (1%)
 Strand = Plus / Minus

                                                                           
Query: 40      cagtgccctacaaccttgttaggcaagaattttgaaaagcttgtccagtgtgatcagagg 99
               ||||||||| ||| ||||||  |||| || |||||||||||| |||||||||||||| ||
Sbjct: 4383323 cagtgcccttcaagcttgttgagcaaaaactttgaaaagcttctccagtgtgatcagcgg 4383264

                                                                           
Query: 100     ctacaccagttgagtcaacagacagatgtcatcttggactcttcagtttttgaacccaga 159
               ||| |||| |||||||| ||  ||||  |||| ||||||||| | |||||||||||||||
Sbjct: 4383263 ctaaaccaattgagtcagcaaccagacatcatattggactctcccgtttttgaacccaga 4383204

                                                                           
Query: 160     tgctctatatttgaggatccggtggaattgaagtgccatgactttgctaatttaaaagat 219
               ||||||||||||||||| || || |||| ||||||||| |  ||| ||||||| || || 
Sbjct: 4383203 tgctctatatttgaggacccagttgaatcgaagtgccaaggttttactaatttgaaggac 4383144

                                                                           
Query: 220     gaacgtgaagatctgcctgggttttcagggtctgtgtcaccatgtgctggttcatctatg 279
               |||| ||||    |  ||||||||||||| ||| ||||||| |||||||||||||| |||
Sbjct: 4383143 gaacatgaa---ttatctgggttttcaggttctctgtcaccctgtgctggttcatccatg 4383087

                         
Query: 280     tctactaaga 289
               ||| ||||||
Sbjct: 4383086 tctgctaaga 4383077



 Score = 48.1 bits (24), Expect = 0.037
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                       
Query: 4       ggtggccaagcaagtatgaacagg 27
               ||||||||||||||||||||||||
Sbjct: 4384174 ggtggccaagcaagtatgaacagg 4384151
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>dbj|AP003508.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0470C02
          Length = 158849

 Score =  176 bits (89), Expect = 6e-41
 Identities = 202/239 (84%), Gaps = 3/239 (1%)
 Strand = Plus / Minus

                                                                         
Query: 375   agtcagcagaaacgtaaatggtgtagctcaagaattcaatatcccaaactggtggagtca 434
             |||||||||||||||||||||||   ||| ||| || |||||||| | ||||||||||||
Sbjct: 30360 agtcagcagaaacgtaaatggtg---ctccagagttaaatatccccagctggtggagtca 30304

                                                                         
Query: 435   actgaaagtgcccgggcttagaccatcaatgtcagtggatgatttggtcagccacctagg 494
             |||||||||||| ||||||||||| || |||||||||||||||||||| | |||| | ||
Sbjct: 30303 actgaaagtgcctgggcttagaccgtctatgtcagtggatgatttggtaaaccacttggg 30244

                                                                         
Query: 495   aaattgcatcagcgagcagatcacttcaggcaatccttctatggccaacaatgtggtgcc 554
             ||| ||||||   ||||||||||| |||| ||||||| |  || ||| ||| | ||||||
Sbjct: 30243 aaactgcatctcggagcagatcacatcagtcaatcctacattgcccagcaacgaggtgcc 30184

                                                                        
Query: 555   tacaaaagaatcgctagaggagattgcacagtaccttcttggcgacgcacagggcccac 613
              ||||||||| | || |||||||| || ||||||||||| || || |||||||||||||
Sbjct: 30183 aacaaaagaaacactggaggagatcgctcagtaccttctcggagatgcacagggcccac 30125



 Score =  167 bits (84), Expect = 6e-38
 Identities = 209/250 (83%), Gaps = 3/250 (1%)
 Strand = Plus / Minus

                                                                         
Query: 40    cagtgccctacaaccttgttaggcaagaattttgaaaagcttgtccagtgtgatcagagg 99
             ||||||||| ||| ||||||  |||| || |||||||||||| |||||||||||||| ||
Sbjct: 31004 cagtgcccttcaagcttgttgagcaaaaactttgaaaagcttctccagtgtgatcagcgg 30945

                                                                         
Query: 100   ctacaccagttgagtcaacagacagatgtcatcttggactcttcagtttttgaacccaga 159
             ||| |||| |||||||| ||  ||||  |||| ||||||||| | |||||||||||||||
Sbjct: 30944 ctaaaccaattgagtcagcaaccagacatcatattggactctcccgtttttgaacccaga 30885

                                                                         
Query: 160   tgctctatatttgaggatccggtggaattgaagtgccatgactttgctaatttaaaagat 219
             ||||||||||||||||| || || |||| ||||||||| |  ||| ||||||| || || 
Sbjct: 30884 tgctctatatttgaggacccagttgaatcgaagtgccaaggttttactaatttgaaggac 30825

                                                                         
Query: 220   gaacgtgaagatctgcctgggttttcagggtctgtgtcaccatgtgctggttcatctatg 279
             |||| ||||    |  ||||||||||||| ||| ||||||| |||||||||||||| |||
Sbjct: 30824 gaacatgaa---ttatctgggttttcaggttctctgtcaccctgtgctggttcatccatg 30768

                       
Query: 280   tctactaaga 289
             ||| ||||||
Sbjct: 30767 tctgctaaga 30758



 Score = 48.1 bits (24), Expect = 0.037
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                     
Query: 4     ggtggccaagcaagtatgaacagg 27
             ||||||||||||||||||||||||
Sbjct: 31855 ggtggccaagcaagtatgaacagg 31832
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>emb|AJ000237.1|HVJ000237 Hordeum vulgare mRNA for expressed sequence tag
          Length = 206

 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 59/63 (93%)
 Strand = Plus / Plus

                                                                       
Query: 597 cgacgcacagggcccacaggcgccggcctncgacgagcggctgatggcacgggtggactc 656
           |||||||||||||||||  |||||||||| |||| |||||||||||||||||||||||||
Sbjct: 1   cgacgcacagggcccacgtgcgccggcctccgacaagcggctgatggcacgggtggactc 60

              
Query: 657 act 659
           |||
Sbjct: 61  act 63
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>ref|XM_468236.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1572

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                              
Query: 62  gcaagaattttgaaaagcttgtccagtgtgatcag 96
           ||||||| |||||||||||| | ||||||||||||
Sbjct: 782 gcaagaactttgaaaagcttattcagtgtgatcag 816
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                                   
Query: 62       gcaagaattttgaaaagcttgtccagtgtgatcag 96
                ||||||| |||||||||||| | ||||||||||||
Sbjct: 33751268 gcaagaactttgaaaagcttattcagtgtgatcag 33751302
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>dbj|AP004054.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OJ1249_F12
          Length = 133205

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                                 
Query: 62     gcaagaattttgaaaagcttgtccagtgtgatcag 96
              ||||||| |||||||||||| | ||||||||||||
Sbjct: 119675 gcaagaactttgaaaagcttattcagtgtgatcag 119709
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>dbj|AP005115.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0700F06
          Length = 139277

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                                
Query: 62    gcaagaattttgaaaagcttgtccagtgtgatcag 96
             ||||||| |||||||||||| | ||||||||||||
Sbjct: 82135 gcaagaactttgaaaagcttattcagtgtgatcag 82169
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>gb|AC111115.13| Mus musculus chromosome 5, clone RP23-213H20, complete sequence
          Length = 201694

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 448   gggcttagaccatcaatgtca 468
             |||||||||||||||||||||
Sbjct: 29527 gggcttagaccatcaatgtca 29547
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>gb|AC129553.10| Mus musculus chromosome 5, clone RP24-351J24, complete sequence
          Length = 152414

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 448    gggcttagaccatcaatgtca 468
              |||||||||||||||||||||
Sbjct: 144771 gggcttagaccatcaatgtca 144791
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>gb|AC154138.11| Mus musculus 10 BAC RP23-124J6 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 179306

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 304   tgttttgggaagcaaccagaa 324
             |||||||||||||||||||||
Sbjct: 10230 tgttttgggaagcaaccagaa 10250
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>gb|AC155642.6| Mus musculus 10 BAC RP24-117F24 (Roswell Park Cancer Institute
             (C57BL/6J Male) Mouse BAC Library) complete sequence
          Length = 195095

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 304   tgttttgggaagcaaccagaa 324
             |||||||||||||||||||||
Sbjct: 73647 tgttttgggaagcaaccagaa 73667
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>gb|AC153851.27| Mus musculus 6 BAC RP23-61N4 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 217854

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 483   cagccacctaggaaattgca 502
             ||||||||||||||||||||
Sbjct: 78274 cagccacctaggaaattgca 78293
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>gb|AE000663.1|MMAE000663 Mus musculus TCR beta locus from bases 1 to 250611 (section 1 of 3) of
              the complete sequence
          Length = 250611

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 483    cagccacctaggaaattgca 502
              ||||||||||||||||||||
Sbjct: 141072 cagccacctaggaaattgca 141091
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>gb|AC146536.3| Dasypus novemcinctus clone VMRC5-215B23, complete sequence
          Length = 113776

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 203   ttgctaatttaaaagatgaa 222
             ||||||||||||||||||||
Sbjct: 30842 ttgctaatttaaaagatgaa 30861
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>gb|AC117940.3| Felis catus clone RP86-238N12, complete sequence
          Length = 108805

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 203   ttgctaatttaaaagatgaa 222
             ||||||||||||||||||||
Sbjct: 54490 ttgctaatttaaaagatgaa 54509
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>gb|AC124725.3| Mus musculus BAC clone RP23-459F16 from chromosome 2, complete sequence
          Length = 168983

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 477    tttggtcagccacctaggaaattg 500
              |||| |||||||||||||||||||
Sbjct: 141893 tttgttcagccacctaggaaattg 141916
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>gb|AC144477.16| Medicago truncatula clone mth2-6k4, complete sequence
          Length = 112241

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 543    caatgtggtgcctacaaaagaatc 566
              ||||||||||| ||||||||||||
Sbjct: 104717 caatgtggtgcatacaaaagaatc 104740
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>gb|AC151744.23| Medicago truncatula clone mth2-32k10, complete sequence
          Length = 110897

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 543   caatgtggtgcctacaaaagaatc 566
             ||||||||||| ||||||||||||
Sbjct: 91381 caatgtggtgcatacaaaagaatc 91358
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>emb|AL512655.17| Human DNA sequence from clone RP11-536C2 on chromosome 13, complete
             sequence
          Length = 146002

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 338   caatgaacccaggagctagt 357
             ||||||||||||||||||||
Sbjct: 42235 caatgaacccaggagctagt 42216
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>emb|AL392043.21| Human DNA sequence from clone RP11-288G11 on chromosome 10 Contains the
             3' end of the INPP5A gene for inositol
             polyphosphate-5-phosphatase 40kDa, a novel gene, the
             NKX6-2 gene for NK6 transcription factor related locus 2,
             a novel gene (DKFZp434A1721), the 3' end of a novel gene
             and ten CpG islands, complete sequence
          Length = 208064

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 601   gcacagggcccacaggcgcc 620
             ||||||||||||||||||||
Sbjct: 98939 gcacagggcccacaggcgcc 98958
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>emb|AL023775.1|HS497J21 Human DNA sequence from clone RP3-497J21 on chromosome 6q26-27 Contains
             part of a variant of the RPS6KA2 gene for ribosomal
             protein S6 kinase, 90kD, polypeptide 2 (RSK3) and a IGF-II
             mRNA-binding protein 3 (KOC1) pseudogene, complete
             sequence
          Length = 129432

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 572   aggagattgcacagtacctt 591
             ||||||||||||||||||||
Sbjct: 43543 aggagattgcacagtacctt 43524
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>gb|AC022046.11| Homo sapiens chromosome , clone RP11-13L22, complete sequence
          Length = 169553

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 239    ggttttcagggtctgtgtca 258
              ||||||||||||||||||||
Sbjct: 135695 ggttttcagggtctgtgtca 135714
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>gb|AC096947.2| Homo sapiens chromosome 1 clone RP4-802A10, complete sequence
          Length = 148730

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 115   caacagacagatgtcatctt 134
             ||||||||||||||||||||
Sbjct: 24081 caacagacagatgtcatctt 24100
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>ref|XM_694738.1| PREDICTED: Danio rerio similar to bloodthirsty (LOC571172), mRNA
          Length = 1638

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 106 cagttgagtcaacagacaga 125
           ||||||||||||||||||||
Sbjct: 603 cagttgagtcaacagacaga 584
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>gb|AC008952.7| Homo sapiens chromosome 5 clone CTD-2337D22, complete sequence
          Length = 184194

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 505   agcgagcagatcacttcagg 524
             ||||||||||||||||||||
Sbjct: 73605 agcgagcagatcacttcagg 73586
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>gb|AC008838.6| Homo sapiens chromosome 5 clone CTD-2151B15, complete sequence
          Length = 128642

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 505    agcgagcagatcacttcagg 524
              ||||||||||||||||||||
Sbjct: 112908 agcgagcagatcacttcagg 112927
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>gb|AC008836.6|AC008836 Homo sapiens chromosome 5 clone CTD-2150D9, complete sequence
          Length = 157492

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 231    tctgcctgggttttcagggt 250
              ||||||||||||||||||||
Sbjct: 117577 tctgcctgggttttcagggt 117596
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>gb|AC022203.4|AC022203 Homo sapiens BAC clone RP11-490K15 from 13, complete sequence
          Length = 177088

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 338   caatgaacccaggagctagt 357
             ||||||||||||||||||||
Sbjct: 49627 caatgaacccaggagctagt 49646
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>gb|AC016908.5| Homo sapiens BAC clone RP11-457D4 from 2, complete sequence
          Length = 183515

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 338    caatgaacccaggagctagt 357
              ||||||||||||||||||||
Sbjct: 179084 caatgaacccaggagctagt 179103
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>gb|AC171276.3| Pan troglodytes BAC clone CH251-740N2 from chromosome unknown, complete
              sequence
          Length = 202258

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 338    caatgaacccaggagctagt 357
              ||||||||||||||||||||
Sbjct: 133551 caatgaacccaggagctagt 133532
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>emb|AL845354.13| Mouse DNA sequence from clone RP23-318L10 on chromosome 2, complete
              sequence
          Length = 178468

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 477    tttggtcagccacctaggaaattg 500
              |||| |||||||||||||||||||
Sbjct: 132812 tttgttcagccacctaggaaattg 132789
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>gb|AC158942.7| Mus musculus chromosome 5, clone RP23-240A11, complete sequence
          Length = 194039

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 106   cagttgagtcaacagacaga 125
             ||||||||||||||||||||
Sbjct: 91968 cagttgagtcaacagacaga 91987
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>gb|AC161768.25| Mus musculus 6 BAC RP23-37C14 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 196068

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 483    cagccacctaggaaattgca 502
              ||||||||||||||||||||
Sbjct: 175123 cagccacctaggaaattgca 175142


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,918,224
Number of Sequences: 3902068
Number of extensions: 5918224
Number of successful extensions: 99281
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 99171
Number of HSP's gapped (non-prelim): 104
length of query: 659
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 636
effective length of database: 17,143,297,704
effective search space: 10903137339744
effective search space used: 10903137339744
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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