Clone Information

BLAST Search Result

Clone Name	baal8m11
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	PSD6_ORYSA (Q8W425) 26S proteasome non-ATPase regulatory subunit...	303	2e-82
2	PSD6_ARATH (Q93Y35) Probable 26S proteasome non-ATPase regulator...	261	1e-69
3	PSD6_MOUSE (Q99JI4) 26S proteasome non-ATPase regulatory subunit...	175	8e-44
4	PSD6_HUMAN (Q15008) 26S proteasome non-ATPase regulatory subunit...	173	4e-43
5	PSD6_DROME (Q9V3G7) 26S proteasome non-ATPase regulatory subunit...	153	3e-37
6	PSD6_CAEEL (Q20585) 26S proteasome non-ATPase regulatory subunit...	146	4e-35
7	RPN7_SCHPO (Q10335) Probable 26S proteasome regulatory subunit rpn7	105	1e-22
8	RPN7_YEAST (Q06103) 26S proteasome regulatory subunit RPN7	89	1e-17
9	MYH14_HUMAN (Q7Z406) Myosin-14 (Myosin heavy chain, nonmuscle II...	40	0.005
10	RAD50_PYRKO (Q5JHN1) DNA double-strand break repair rad50 ATPase	37	0.043
11	RAD50_PYRFU (P58301) DNA double-strand break repair rad50 ATPase	37	0.043
12	AGA1_YEAST (P32323) A-agglutinin attachment subunit precursor	37	0.056
13	CLPE_STRPN (P35594) ATP-dependent Clp protease ATP-binding subun...	34	0.28
14	MRCKB_RAT (Q7TT49) Serine/threonine-protein kinase MRCK beta (EC...	34	0.36
15	IF2P_SCHPO (Q10251) Eukaryotic translation initiation factor 5B ...	34	0.36
16	MRCKB_MOUSE (Q7TT50) Serine/threonine-protein kinase MRCK beta (...	33	0.48
17	RAD50_AERPE (Q9YFZ1) DNA double-strand break repair rad50 ATPase	33	0.62
18	SRX10_CAEEL (P34551) Serpentine receptor class XA 10 (Protein sr...	28	0.74
19	YHES_ECOLI (P63389) Hypothetical ABC transporter ATP-binding pro...	33	0.81
20	YHES_ECO57 (P63390) Hypothetical ABC transporter ATP-binding pro...	33	0.81
21	ATG20_CANGA (Q6FR93) Autophagy-related protein 20	33	0.81
22	ENV_MLVRK (P31794) Env polyprotein precursor (Coat polyprotein) ...	32	1.1
23	MUTS2_CLOAB (Q97GM6) MutS2 protein	32	1.1
24	ENV_MLVRD (P11268) Env polyprotein precursor (Coat polyprotein) ...	32	1.4
25	ENV_MLVMO (P03385) Env polyprotein precursor [Contains: Surface ...	32	1.4
26	ENV_MCFF (P15073) Env polyprotein precursor (Coat polyprotein) [...	32	1.4
27	ATPF_SYNP6 (P08447) ATP synthase B chain (EC 3.6.3.14) (Subunit I)	32	1.4
28	ENV_MLVCB (P08360) Env polyprotein precursor (Coat polyprotein) ...	32	1.8
29	SMCA4_HUMAN (P51532) Probable global transcription activator SNF...	31	2.4
30	POTA_MYCPN (P75059) Spermidine/putrescine import ATP-binding pro...	31	2.4
31	TPM_CHAFE (Q9N2R3) Tropomyosin (Allergen Cha f 1) (Cha f I) (Fra...	31	3.1
32	ENV2_MOUSE (P11370) Retrovirus-related Env polyprotein from Fv-4...	31	3.1
33	MERL_PAPAN (P59750) Merlin (Moesin-ezrin-radixin-like protein) (...	30	4.0
34	MERL_HUMAN (P35240) Merlin (Moesin-ezrin-radixin-like protein) (...	30	4.0
35	ZN365_RAT (Q5PQS2) Protein ZNF365	30	4.0
36	MERL_RAT (Q63648) Merlin (Moesin-ezrin-radixin-like protein) (Ne...	30	4.0
37	SYTM_ARATH (O04630) Threonyl-tRNA synthetase, mitochondrial prec...	30	4.0
38	ENV_MSVFB (P03387) Env polyprotein (Coat polyprotein) [Contains:...	30	4.0
39	MYH14_MOUSE (Q6URW6) Myosin-14 (Myosin heavy chain, nonmuscle II...	30	4.0
40	MERL_MOUSE (P46662) Merlin (Moesin-ezrin-radixin-like protein) (...	30	4.0
41	POTA_MYCGE (P47288) Spermidine/putrescine import ATP-binding pro...	30	4.0
42	ORC2_MOUSE (Q60862) Origin recognition complex subunit 2	30	4.0
43	YGCJ_ECOLI (Q46899) Hypothetical protein ygcJ	30	4.0
44	GCC2_MOUSE (Q8CHG3) GRIP and coiled-coil domain-containing prote...	30	4.0
45	SYCP1_HUMAN (Q15431) Synaptonemal complex protein 1 (SCP-1)	30	4.0
46	BAG_STRAG (P27951) IgA FC receptor precursor (Beta antigen) (B a...	30	4.0
47	ENV_MLVF5 (P03390) Env polyprotein precursor [Contains: Coat pro...	30	5.3
48	IFB2_CAEEL (Q19286) Intermediate filament protein ifb-2 (Interme...	30	5.3
49	SLAP_BACCI (P35824) S-layer-related protein precursor	30	5.3
50	IF3A_CAEEL (P34339) Probable eukaryotic translation initiation f...	30	5.3
51	BRE1_YARLI (Q6CF78) Ubiquitin-protein ligase BRE1 (EC 6.3.2.-)	30	5.3
52	TPM_HOMAM (O44119) Tropomyosin (Allergen Hom a 1)	30	5.3
53	ENV_RMCFV (P06445) Env polyprotein precursor (Coat polyprotein) ...	30	5.3
54	YKQ9_CAEEL (P34304) Hypothetical protein C06E1.9	30	5.3
55	GUN_BACS1 (P06564) Endoglucanase precursor (EC 3.2.1.4) (Endo-1,...	30	5.3
56	ENV_MLVFP (P26803) Env polyprotein precursor [Contains: Coat pro...	30	5.3
57	NPS12_ARATH (Q9LNH6) Novel plant SNARE 12 (AtNPSN12)	30	5.3
58	ENV_MLVKI (P04502) Env polyprotein (Coat polyprotein) [Contains:...	30	5.3
59	SYV_METCA (Q606C1) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--t...	30	6.9
60	GAS7_RAT (O55148) Growth-arrest-specific protein 7 (GAS-7)	30	6.9
61	ENV_MLVFF (P26804) Env polyprotein precursor [Contains: Coat pro...	30	6.9
62	BRE1A_CHICK (Q5ZLS3) Ubiquitin-protein ligase BRE1A (EC 6.3.2.-)...	30	6.9
63	HBHA_MYCTU (P0A5P6) Heparin-binding hemagglutinin (Adhesin)	29	9.0
64	HBHA_MYCBO (P0A5P7) Heparin-binding hemagglutinin (Adhesin)	29	9.0
65	YKI5_CAEEL (P46012) Hypothetical protein C01G6.5	29	9.0
66	PFDA_PYRFU (Q8U3T0) Prefoldin alpha subunit (GimC alpha subunit)	29	9.0

>PSD6_ORYSA (Q8W425) 26S proteasome non-ATPase regulatory subunit 6 (26S|
           proteasome regulatory particle non-ATPase subunit 7)
           (OsRPN7)
          Length = 389

 Score =  303 bits (776), Expect = 2e-82
 Identities = 152/168 (90%), Positives = 162/168 (96%)
 Frame = +3

Query: 93  SHPDVDDLSKVDIRSDVLSAVKSDDMAPLFESLAATGVLEPDAALLAEMRARIDEEIRKL 272
           SHPDVDDL+KVD+R+DVL+AVKSDDMA L+ESL A GVLE DAALLAEMR RI+EEIRKL
Sbjct: 25  SHPDVDDLAKVDLRADVLAAVKSDDMASLYESLGAGGVLETDAALLAEMRGRIEEEIRKL 84

Query: 273 DEKIADAEENLGESEVREAHLAKSLYFVKVGEKEKALEQLKVTEGKTVAIGQKMDLVFYT 452
           DEKIADAEENLGESEVREAHLAKSLYF++VGEKEKALEQLKVTEGKTVA+GQKMDLVF+T
Sbjct: 85  DEKIADAEENLGESEVREAHLAKSLYFIRVGEKEKALEQLKVTEGKTVAVGQKMDLVFHT 144

Query: 453 LQIGLFYMDFDLISKSIDKAKKLFEEGGDWERKNRLKVYEGLYCMATR 596
           LQIG FYMDFDLISKSIDKAKKLFEEGGDWERKNRLKVYEGLYCMATR
Sbjct: 145 LQIGFFYMDFDLISKSIDKAKKLFEEGGDWERKNRLKVYEGLYCMATR 192

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>PSD6_ARATH (Q93Y35) Probable 26S proteasome non-ATPase regulatory subunit 6|
          Length = 387

 Score =  261 bits (666), Expect = 1e-69
 Identities = 124/168 (73%), Positives = 150/168 (89%)
 Frame = +3

Query: 93  SHPDVDDLSKVDIRSDVLSAVKSDDMAPLFESLAATGVLEPDAALLAEMRARIDEEIRKL 272
           +HPDV D+ KV ++S+VL  ++S  MAPL+E+L A+ VL+ D +LL  MRA  +EE++KL
Sbjct: 23  THPDVPDIEKVQLKSEVLDFIRSHGMAPLYETLIASSVLDLDQSLLESMRAANEEELKKL 82

Query: 273 DEKIADAEENLGESEVREAHLAKSLYFVKVGEKEKALEQLKVTEGKTVAIGQKMDLVFYT 452
           DEKIADAEENLGESEVREAHLAK+LYF+++ +KEKALEQLK+TEGKTVA+GQKMD+VFYT
Sbjct: 83  DEKIADAEENLGESEVREAHLAKALYFIRISDKEKALEQLKLTEGKTVAVGQKMDVVFYT 142

Query: 453 LQIGLFYMDFDLISKSIDKAKKLFEEGGDWERKNRLKVYEGLYCMATR 596
           LQ+  FYMDFDL+SKSIDKAKKLFEEGGDWERKNRLKVYEGLYCM+TR
Sbjct: 143 LQLAFFYMDFDLVSKSIDKAKKLFEEGGDWERKNRLKVYEGLYCMSTR 190

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>PSD6_MOUSE (Q99JI4) 26S proteasome non-ATPase regulatory subunit 6 (26S|
           proteasome regulatory subunit S10) (p42A)
          Length = 389

 Score =  175 bits (444), Expect = 8e-44
 Identities = 80/156 (51%), Positives = 123/156 (78%)
 Frame = +3

Query: 129 IRSDVLSAVKSDDMAPLFESLAATGVLEPDAALLAEMRARIDEEIRKLDEKIADAEENLG 308
           +R ++++AV+ ++MAP +E+L  +   + D  LL++M+   +EE+++LDE++ DAE+NLG
Sbjct: 37  VREELMAAVRENNMAPYYEALCKSLDWQMDVDLLSKMKKANEEELKRLDEELEDAEKNLG 96

Query: 309 ESEVREAHLAKSLYFVKVGEKEKALEQLKVTEGKTVAIGQKMDLVFYTLQIGLFYMDFDL 488
           ESE+R+A +AK+ Y  ++G+KE AL   + T  KTVA+G ++D+VFY L+IGLFYMD DL
Sbjct: 97  ESEIRDAMMAKAEYLCQIGDKEGALTAFRKTYDKTVALGHRLDIVFYLLRIGLFYMDNDL 156

Query: 489 ISKSIDKAKKLFEEGGDWERKNRLKVYEGLYCMATR 596
           I+++ +KAK L EEGGDW+R+NRLKVY+GLYC+A R
Sbjct: 157 ITRNTEKAKSLIEEGGDWDRRNRLKVYQGLYCVAIR 192

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>PSD6_HUMAN (Q15008) 26S proteasome non-ATPase regulatory subunit 6 (26S|
           proteasome regulatory subunit S10) (p42A) (Proteasome
           regulatory particle subunit p44S10) (Phosphonoformate
           immuno-associated protein 4) (Breast cancer-associated
           protein SGA-113M)
          Length = 389

 Score =  173 bits (438), Expect = 4e-43
 Identities = 79/156 (50%), Positives = 122/156 (78%)
 Frame = +3

Query: 129 IRSDVLSAVKSDDMAPLFESLAATGVLEPDAALLAEMRARIDEEIRKLDEKIADAEENLG 308
           +R ++++AV+ ++MAP +E+L  +   + D  LL +M+   ++E+++LDE++ DAE+NLG
Sbjct: 37  VRDELMAAVRDNNMAPYYEALCKSLDWQIDVDLLNKMKKANEDELKRLDEELEDAEKNLG 96

Query: 309 ESEVREAHLAKSLYFVKVGEKEKALEQLKVTEGKTVAIGQKMDLVFYTLQIGLFYMDFDL 488
           ESE+R+A +AK+ Y  ++G+KE AL   + T  KTVA+G ++D+VFY L+IGLFYMD DL
Sbjct: 97  ESEIRDAMMAKAEYLCRIGDKEGALTAFRKTYDKTVALGHRLDIVFYLLRIGLFYMDNDL 156

Query: 489 ISKSIDKAKKLFEEGGDWERKNRLKVYEGLYCMATR 596
           I+++ +KAK L EEGGDW+R+NRLKVY+GLYC+A R
Sbjct: 157 ITRNTEKAKSLIEEGGDWDRRNRLKVYQGLYCVAIR 192

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>PSD6_DROME (Q9V3G7) 26S proteasome non-ATPase regulatory subunit 6 (26S|
           proteasome regulatory subunit S10) (Rpn7 protein)
          Length = 389

 Score =  153 bits (387), Expect = 3e-37
 Identities = 73/156 (46%), Positives = 112/156 (71%)
 Frame = +3

Query: 129 IRSDVLSAVKSDDMAPLFESLAATGVLEPDAALLAEMRARIDEEIRKLDEKIADAEENLG 308
           +++ +L A+++++MAP +E + +      D  LLA M+     E+ +LD  I DAE+NLG
Sbjct: 37  LKAKLLEAIRTENMAPWYEHICSELGWTVDKDLLARMKENNRVEVEQLDAAIEDAEKNLG 96

Query: 309 ESEVREAHLAKSLYFVKVGEKEKALEQLKVTEGKTVAIGQKMDLVFYTLQIGLFYMDFDL 488
           E EVREA+L KS Y  ++G+K  A    + T  KTV++G ++D+VF+ +++GLFY+D DL
Sbjct: 97  EMEVREANLKKSEYLCRIGDKAAAETAFRKTYEKTVSLGHRLDIVFHLIRLGLFYLDHDL 156

Query: 489 ISKSIDKAKKLFEEGGDWERKNRLKVYEGLYCMATR 596
           I+++IDKAK L EEGGDW+R+NRLKVY+G+Y +A R
Sbjct: 157 ITRNIDKAKYLIEEGGDWDRRNRLKVYQGVYSVAVR 192

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>PSD6_CAEEL (Q20585) 26S proteasome non-ATPase regulatory subunit 6 (26S|
           proteasome regulatory subunit rpn-7)
          Length = 410

 Score =  146 bits (369), Expect = 4e-35
 Identities = 74/168 (44%), Positives = 110/168 (65%)
 Frame = +3

Query: 93  SHPDVDDLSKVDIRSDVLSAVKSDDMAPLFESLAATGVLEPDAALLAEMRARIDEEIRKL 272
           +HP+VD   K      +   +K  DMAP +E + A   +  DA  LA M+A   ++I ++
Sbjct: 39  NHPEVDSSVKEAKLEKLQETIKEFDMAPFYELVCADFKIVVDATQLAAMKAANQKKIDEI 98

Query: 273 DEKIADAEENLGESEVREAHLAKSLYFVKVGEKEKALEQLKVTEGKTVAIGQKMDLVFYT 452
             ++ DAE+NLGESEVR+  L K  Y+ ++G+K+ AL+    T  KTV +G ++D+VF  
Sbjct: 99  TAEVEDAEKNLGESEVRQGLLRKFEYYCQIGDKDNALKAYTATYEKTVGMGYRIDVVFAM 158

Query: 453 LQIGLFYMDFDLISKSIDKAKKLFEEGGDWERKNRLKVYEGLYCMATR 596
           +++GLF++D  LI+K I KAK+L E+GGDWERKNRL+ YE LY M+ R
Sbjct: 159 IRVGLFFLDHHLINKFITKAKELMEQGGDWERKNRLRSYEALYRMSVR 206

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>RPN7_SCHPO (Q10335) Probable 26S proteasome regulatory subunit rpn7|
          Length = 409

 Score =  105 bits (261), Expect = 1e-22
 Identities = 51/156 (32%), Positives = 94/156 (60%), Gaps = 4/156 (2%)
 Frame = +3

Query: 141 VLSAVKSDDMAPLFESLA----ATGVLEPDAALLAEMRARIDEEIRKLDEKIADAEENLG 308
           + SA++  D+APL++ L+     +  ++ D+  L  M  + +E++ + D+ I DA+E  G
Sbjct: 48  LFSAIRDHDLAPLYKYLSENPKTSASIDFDSNFLNSMIKKNEEKLAEFDKAIEDAQELNG 107

Query: 309 ESEVREAHLAKSLYFVKVGEKEKALEQLKVTEGKTVAIGQKMDLVFYTLQIGLFYMDFDL 488
           E E+ EA   K+ Y+  + ++E+ ++    T  +    G K+D++F  +++   Y D  +
Sbjct: 108 EHEILEAMKNKADYYTNICDRERGVQLCDETFERATLTGMKIDVLFSKIRLAYVYADMRV 167

Query: 489 ISKSIDKAKKLFEEGGDWERKNRLKVYEGLYCMATR 596
           + + ++K K L E+GGDWERKNRLK Y+G+Y M+ R
Sbjct: 168 VGQLLEKLKPLIEKGGDWERKNRLKAYQGIYLMSIR 203

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>RPN7_YEAST (Q06103) 26S proteasome regulatory subunit RPN7|
          Length = 429

 Score = 89.0 bits (219), Expect = 1e-17
 Identities = 49/173 (28%), Positives = 91/173 (52%), Gaps = 21/173 (12%)
 Frame = +3

Query: 141 VLSAVKSDDMAPLFESLAATGVLEP--------------------DAALLAEMRARIDEE 260
           VL+ +K ++MAP ++ L    ++                      D  L  E+  + + +
Sbjct: 50  VLAKIKEEEMAPYYKYLCEEYLVNNGQSDLEHDEKSDSLNEWIKFDQELYNELCKKNESK 109

Query: 261 IRKLDEKIADAEEN-LGESEVREAHLAKSLYFVKVGEKEKALEQLKVTEGKTVAIGQKMD 437
           I++L+EKI   EE+  GE E  +A +    Y+ ++G+K+ A + L  +  K ++ G K+D
Sbjct: 110 IKELNEKIQKLEEDDEGELEQAQAWINLGEYYAQIGDKDNAEKTLGKSLSKAISTGAKID 169

Query: 438 LVFYTLQIGLFYMDFDLISKSIDKAKKLFEEGGDWERKNRLKVYEGLYCMATR 596
           ++    ++G FY D   + + ++    + E+GGDWER+NR K Y G++C+A R
Sbjct: 170 VMLTIARLGFFYNDQLYVKEKLEAVNSMIEKGGDWERRNRYKTYYGIHCLAVR 222

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>MYH14_HUMAN (Q7Z406) Myosin-14 (Myosin heavy chain, nonmuscle IIc) (Nonmuscle|
            myosin heavy chain IIc) (NMHC II-C)
          Length = 1995

 Score = 40.0 bits (92), Expect = 0.005
 Identities = 40/138 (28%), Positives = 60/138 (43%), Gaps = 17/138 (12%)
 Frame = +3

Query: 183  ESLAATGVLEPDAALLAEMRARIDEEIRKLDEKIADAEENLGESEVR--EAHLAKSLYFV 356
            +S    G L+   A L E RAR+ E++R   E  A+AEE  G    R  E  L  S    
Sbjct: 887  QSAREVGELQGRVAQLEEERARLAEQLRAEAELCAEAEETRGRLAARKQELELVVSELEA 946

Query: 357  KVGEKEKALEQLKVTEGKTV---------------AIGQKMDLVFYTLQIGLFYMDFDLI 491
            +VGE+E+   Q++ TE K +                  QK+ L   T +  +   + DL+
Sbjct: 947  RVGEEEECSRQMQ-TEKKRLQQHIQELEAHLEAEEGARQKLQLEKVTTEAKMKKFEEDLL 1005

Query: 492  SKSIDKAKKLFEEGGDWE 545
                D+  KL + G  W+
Sbjct: 1006 LLE-DQNSKLSKSGSCWK 1022



 Score = 30.0 bits (66), Expect = 5.3
 Identities = 26/63 (41%), Positives = 32/63 (50%)
 Frame = +3

Query: 231  AEMRARIDEEIRKLDEKIADAEENLGESEVREAHLAKSLYFVKVGEKEKALEQLKVTEGK 410
            A  RAR    I  L+ K+A AEE L E E RE  L+  L  V+  EK      L+V E +
Sbjct: 1823 AGARARHKMTIAALESKLAQAEEQL-EQETRERILSGKL--VRRAEKRLKEVVLQVEEER 1879

Query: 411  TVA 419
             VA
Sbjct: 1880 RVA 1882

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>RAD50_PYRKO (Q5JHN1) DNA double-strand break repair rad50 ATPase|
          Length = 883

 Score = 37.0 bits (84), Expect = 0.043
 Identities = 34/118 (28%), Positives = 55/118 (46%), Gaps = 8/118 (6%)
 Frame = +3

Query: 105 VDDLSKVDIRSDVLSAVKSD---DMAPLFESLAATGVLEPDAALLAEMRARI---DEEIR 266
           +D+LSK + R   L   K     ++  L E L A    +   A L  ++ R+   +EEI 
Sbjct: 330 IDELSKKEARVKELLKEKEGLQKELGALEEDLKAYQRAKELMANLERLKKRLTLSEEEIE 389

Query: 267 KLDEKIADAEENLGE--SEVREAHLAKSLYFVKVGEKEKALEQLKVTEGKTVAIGQKM 434
           KL+ +I  A E   E   E+ E    +       GE+ KAL +LK  +G+    G+++
Sbjct: 390 KLEAEIQKARERKEEIMKELEEIGSRRGELKSIAGERNKALMELKKAKGRCPVCGREL 447

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>RAD50_PYRFU (P58301) DNA double-strand break repair rad50 ATPase|
          Length = 882

 Score = 37.0 bits (84), Expect = 0.043
 Identities = 33/139 (23%), Positives = 64/139 (46%), Gaps = 14/139 (10%)
 Frame = +3

Query: 183 ESLAATGVLEPDAALLAEMRARIDEEIRKLDEKIADAEEN-----LGESEVREAHLAKSL 347
           E L    +LE D  L  E++A+  E +R+L EK+ D         L E E ++  + +  
Sbjct: 355 EILNKLAILEKDHQLYEEIKAK-KENLRQLKEKLGDKSPEDIKKLLEELETKKTTIEEER 413

Query: 348 YFV---------KVGEKEKALEQLKVTEGKTVAIGQKMDLVFYTLQIGLFYMDFDLISKS 500
             +         K+G+ + A+E+LK  +GK    G+++        +  +++D   ++ S
Sbjct: 414 NEITQRIGELKNKIGDLKTAIEELKKAKGKCPVCGRELTDEHREELLSKYHLD---LNNS 470

Query: 501 IDKAKKLFEEGGDWERKNR 557
            +   KL +   + ER+ R
Sbjct: 471 KNTLAKLIDRKSELERELR 489

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>AGA1_YEAST (P32323) A-agglutinin attachment subunit precursor|
          Length = 725

 Score = 36.6 bits (83), Expect = 0.056
 Identities = 31/130 (23%), Positives = 43/130 (33%), Gaps = 6/130 (4%)
 Frame = -3

Query: 418 ATVFPSVTLSCSSAFSFSPTFTKYKDLARWASRTSLSPKFXXXXXXXXXXXXXXXXXXXX 239
           A++   VT + SS  S +PT T     +   S TS SP                      
Sbjct: 163 ASIISPVTSTLSSTTSSNPTTTSLSSTSTSPSSTSTSPSSTSTSSSSTSTSSSSTSTSSS 222

Query: 238 XXXXXXXXXXXXXXXXSDSNSGAMSSDLTAESTSERMST------LERSSTSGWESRKSL 77
                           S S+S   +S  +  ++S   ST         SSTS   S KS 
Sbjct: 223 STSTSPSSTSTSSSLTSTSSSSTSTSQSSTSTSSSSTSTSPSSTSTSSSSTSTSPSSKST 282

Query: 76  WASNRCFSCF 47
            AS+   S +
Sbjct: 283 SASSTSTSSY 292

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>CLPE_STRPN (P35594) ATP-dependent Clp protease ATP-binding subunit clpE|
           (Exported protein 4)
          Length = 752

 Score = 34.3 bits (77), Expect = 0.28
 Identities = 24/79 (30%), Positives = 39/79 (49%), Gaps = 6/79 (7%)
 Frame = +3

Query: 213 PDAA--LLAEMRARIDEEIRKLDEKIADAE----ENLGESEVREAHLAKSLYFVKVGEKE 374
           PD A  LL E  ++++  +  +D K+ D      ENL     RE    K+ YF     K 
Sbjct: 338 PDKAIDLLDEAGSKMNLTLNFVDPKVIDQRLIEAENLKSQATREEDFEKAAYFRDQIAKY 397

Query: 375 KALEQLKVTEGKTVAIGQK 431
           K +++ K+T+  T +I +K
Sbjct: 398 KEMQKKKITDQDTPSISEK 416

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>MRCKB_RAT (Q7TT49) Serine/threonine-protein kinase MRCK beta (EC 2.7.11.1)|
            (CDC42-binding protein kinase beta) (Myotonic dystrophy
            kinase-related CDC42-binding kinase beta) (Myotonic
            dystrophy protein kinase-like beta) (MRCK beta)
            (DMPK-like beta)
          Length = 1713

 Score = 33.9 bits (76), Expect = 0.36
 Identities = 26/84 (30%), Positives = 44/84 (52%), Gaps = 7/84 (8%)
 Frame = +3

Query: 147  SAVKSDDMAPLF-----ESLAATGVLEPDAALLAEMRAR--IDEEIRKLDEKIADAEENL 305
            S++ S  + PL+     + L  +  LE  +AL AE+RA+  + EE+RK+ +     E  L
Sbjct: 852  SSLGSRTLDPLWKVRRSQKLDMSARLELQSALEAEIRAKQLVHEELRKVKDTSLAFESKL 911

Query: 306  GESEVREAHLAKSLYFVKVGEKEK 377
             ESE +   L + +  +K   +EK
Sbjct: 912  KESEAKNRELLEEMQSLKKRMEEK 935

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>IF2P_SCHPO (Q10251) Eukaryotic translation initiation factor 5B (eIF-5B)|
           (Translation initiation factor IF-2)
          Length = 1079

 Score = 33.9 bits (76), Expect = 0.36
 Identities = 33/113 (29%), Positives = 55/113 (48%), Gaps = 5/113 (4%)
 Frame = +3

Query: 108 DDLSKVDIRSDV-LSAVKSDDMAPLFESLAATGVLEPDAA----LLAEMRARIDEEIRKL 272
           D L+  ++ S+V +S    +D +   +  A +    P+      +L E RAR +EE R  
Sbjct: 209 DTLASSEVSSEVDISTPAENDSSAKGKQAAGSKRKGPNVTALQKMLEEKRAREEEEQRIR 268

Query: 273 DEKIADAEENLGESEVREAHLAKSLYFVKVGEKEKALEQLKVTEGKTVAIGQK 431
           +E+   AEE    +EV EA   K    +K  EKE+  ++    +GK ++  QK
Sbjct: 269 EEEARIAEEEKRLAEVEEAR--KEEARLKKKEKERKKKEEMKAQGKYLSKKQK 319

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>MRCKB_MOUSE (Q7TT50) Serine/threonine-protein kinase MRCK beta (EC 2.7.11.1)|
            (CDC42-binding protein kinase beta) (Myotonic dystrophy
            kinase-related CDC42-binding kinase beta) (Myotonic
            dystrophy protein kinase-like beta) (MRCK beta)
            (DMPK-like beta)
          Length = 1713

 Score = 33.5 bits (75), Expect = 0.48
 Identities = 25/84 (29%), Positives = 44/84 (52%), Gaps = 7/84 (8%)
 Frame = +3

Query: 147  SAVKSDDMAPLF-----ESLAATGVLEPDAALLAEMRAR--IDEEIRKLDEKIADAEENL 305
            S++ S  + PL+     + L  +  LE  +AL AE+RA+  + EE+RK+ +     E  L
Sbjct: 852  SSLGSRTLDPLWKVRRSQKLDMSARLELQSALEAEIRAKQLVQEELRKVKDSSLAFESKL 911

Query: 306  GESEVREAHLAKSLYFVKVGEKEK 377
             ESE +   L + +  ++   +EK
Sbjct: 912  KESEAKNRELLEEMQSLRKRMEEK 935

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>RAD50_AERPE (Q9YFZ1) DNA double-strand break repair rad50 ATPase|
          Length = 919

 Score = 33.1 bits (74), Expect = 0.62
 Identities = 42/164 (25%), Positives = 71/164 (43%), Gaps = 30/164 (18%)
 Frame = +3

Query: 177  LFESLAATGVLEPDAALLAEMRARID----EEIRKLDEKIADAEENLGESEV--REAHLA 338
            L E L   G   P+    AE + R+     EE+RKL+  + +   NL   EV  REA   
Sbjct: 528  LEEGLRELGFQTPEDLAKAEQKLRMLRERLEELRKLENSLEEKVRNLSREEVALREAKTR 587

Query: 339  KSLYFVKVGEKE--------------KALEQLKVTEGKTVAIG------QKMDLVFYTLQ 458
                  ++G KE              K LE++ V++ + +A        + +D +    +
Sbjct: 588  ALEVLQRLGIKEEEAREKLKTLSSESKKLERMLVSKAEDLATRLGITAYRSLDDLLEKAR 647

Query: 459  IGLFYMDFDL--ISKSIDKAKKLFEEGG--DWERKNRLKVYEGL 578
              L  +D +L  I + +++A++L EE     WE +  +K  E L
Sbjct: 648  EALEGVDKELSAIERRLEEARRLKEEAAKLKWEAEQVMKRLEEL 691



 Score = 30.0 bits (66), Expect = 5.3
 Identities = 29/95 (30%), Positives = 45/95 (47%), Gaps = 10/95 (10%)
 Frame = +3

Query: 162 DDMAPLFESLAATGVLEPDAALLAEMRARIDEEIRKLDEKIADAEENLG--------ESE 317
           DD+      L A   L  + A LA +++R+D+  R L E I DA E L         ES 
Sbjct: 298 DDLEKRRAELRAKASLAHEVAELARLQSRLDKLGRDL-EMIRDAVEKLEVSRRLKEIESA 356

Query: 318 VREA--HLAKSLYFVKVGEKEKALEQLKVTEGKTV 416
            REA   L ++   +K  ++   L   +VT G+++
Sbjct: 357 RREAENRLLEARSSIKEEQRRYTLLDYRVTRGRSI 391

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>SRX10_CAEEL (P34551) Serpentine receptor class XA 10 (Protein srxa-10)|
          Length = 319

 Score = 28.5 bits (62), Expect(2) = 0.74
 Identities = 14/43 (32%), Positives = 23/43 (53%)
 Frame = -3

Query: 445 NTRSIFWPMATVFPSVTLSCSSAFSFSPTFTKYKDLARWASRT 317
           N  S+F+P    F +V +  +     SPT+TK K++ R   +T
Sbjct: 177 NYYSVFFPFVAFFFNVLVIINFKLQRSPTYTKIKNMFRPKKKT 219



 Score = 23.1 bits (48), Expect(2) = 0.74
 Identities = 9/13 (69%), Positives = 11/13 (84%)
 Frame = -2

Query: 338 GKMGFTHFTLAQV 300
           GK+ FT+F LAQV
Sbjct: 258 GKLAFTYFRLAQV 270

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>YHES_ECOLI (P63389) Hypothetical ABC transporter ATP-binding protein yheS|
          Length = 637

 Score = 32.7 bits (73), Expect = 0.81
 Identities = 17/39 (43%), Positives = 27/39 (69%), Gaps = 4/39 (10%)
 Frame = +3

Query: 243 ARIDEEIRKLDEKIADAEENLGESEV----REAHLAKSL 347
           AR+++E+ KL+ ++A AEE LG+SE+    R+A L   L
Sbjct: 565 ARLEKEMEKLNAQLAQAEEKLGDSELYDQSRKAELTACL 603

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>YHES_ECO57 (P63390) Hypothetical ABC transporter ATP-binding protein yheS|
          Length = 637

 Score = 32.7 bits (73), Expect = 0.81
 Identities = 17/39 (43%), Positives = 27/39 (69%), Gaps = 4/39 (10%)
 Frame = +3

Query: 243 ARIDEEIRKLDEKIADAEENLGESEV----REAHLAKSL 347
           AR+++E+ KL+ ++A AEE LG+SE+    R+A L   L
Sbjct: 565 ARLEKEMEKLNAQLAQAEEKLGDSELYDQSRKAELTACL 603

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>ATG20_CANGA (Q6FR93) Autophagy-related protein 20|
          Length = 753

 Score = 32.7 bits (73), Expect = 0.81
 Identities = 21/83 (25%), Positives = 36/83 (43%), Gaps = 5/83 (6%)
 Frame = +3

Query: 102 DVDDLSKVDIRSDVLSAVKSDDMAPLFESLAATGVLEPDAALLAEMR-----ARIDEEIR 266
           D + +  VDI+  V S +   D+    E L  T +LE D       +      ++DE++ 
Sbjct: 144 DSEAIESVDIKGKVSSGISDADVLKPQEELVHTAILENDNPFYDANKEISGSKKLDEKVN 203

Query: 267 KLDEKIADAEENLGESEVREAHL 335
            +D      + N G+S+ R   L
Sbjct: 204 SVDSMAETTKVNSGDSKQRMGDL 226

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>ENV_MLVRK (P31794) Env polyprotein precursor (Coat polyprotein) [Contains:|
           Coat protein GP76; Spike protein p15E; R protein]
          Length = 665

 Score = 32.3 bits (72), Expect = 1.1
 Identities = 29/119 (24%), Positives = 57/119 (47%), Gaps = 3/119 (2%)
 Frame = +3

Query: 195 ATGVLEPDAALLA--EMRARIDEEIRKLDEKIADAEENLGE-SEVREAHLAKSLYFVKVG 365
           A GV     AL+A  +++A + ++++++++ I + E++L   SEV             V 
Sbjct: 487 AAGVGTGTTALVATQQLQAAVHDDLKEVEKSITNLEKSLTSLSEV-------------VL 533

Query: 366 EKEKALEQLKVTEGKTVAIGQKMDLVFYTLQIGLFYMDFDLISKSIDKAKKLFEEGGDW 542
           +  + L+ L + EG   A   K +  FY    G+       + + +++ +KLFE G  W
Sbjct: 534 QNRRGLDLLFLKEGGLCA-ALKEECCFYADHTGVVRDSMAKLRERLNQRQKLFESGQGW 591

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>MUTS2_CLOAB (Q97GM6) MutS2 protein|
          Length = 788

 Score = 32.3 bits (72), Expect = 1.1
 Identities = 20/47 (42%), Positives = 28/47 (59%)
 Frame = +3

Query: 231 AEMRARIDEEIRKLDEKIADAEENLGESEVREAHLAKSLYFVKVGEK 371
           +E R R+ E  +KL EK+ +AEE+L  SE  +    KS   VK GE+
Sbjct: 601 SEARQRLQESRQKLKEKLNNAEESLNISERDQGEALKS---VKEGEE 644

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>ENV_MLVRD (P11268) Env polyprotein precursor (Coat polyprotein) [Contains:|
           Coat protein GP76; Spike protein p15E; R protein]
          Length = 665

 Score = 32.0 bits (71), Expect = 1.4
 Identities = 28/119 (23%), Positives = 57/119 (47%), Gaps = 3/119 (2%)
 Frame = +3

Query: 195 ATGVLEPDAALLA--EMRARIDEEIRKLDEKIADAEENLGE-SEVREAHLAKSLYFVKVG 365
           A G+     AL+A  +++A + ++++++++ I + E++L   SEV             V 
Sbjct: 487 AAGIGTGTTALVATQQLQAAVHDDLKEVEKSITNLEKSLTSLSEV-------------VL 533

Query: 366 EKEKALEQLKVTEGKTVAIGQKMDLVFYTLQIGLFYMDFDLISKSIDKAKKLFEEGGDW 542
           +  + L+ L + EG   A   K +  FY    G+       + + +++ +KLFE G  W
Sbjct: 534 QNRRGLDLLFLKEGGLCA-ALKEECCFYADHTGVVRDSMAKLRERLNQRQKLFESGQGW 591

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>ENV_MLVMO (P03385) Env polyprotein precursor [Contains: Surface protein (SU)|
           (GP70); Transmembrane protein (TM) (p15E); R protein]
          Length = 665

 Score = 32.0 bits (71), Expect = 1.4
 Identities = 32/135 (23%), Positives = 62/135 (45%), Gaps = 6/135 (4%)
 Frame = +3

Query: 195 ATGVLEPDAALLA-----EMRARIDEEIRKLDEKIADAEENLGE-SEVREAHLAKSLYFV 356
           A G+     AL+A     +++A + +++R++++ I++ E++L   SEV            
Sbjct: 489 AAGIGTGTTALMATQQFQQLQAAVQDDLREVEKSISNLEKSLTSLSEV------------ 536

Query: 357 KVGEKEKALEQLKVTEGKTVAIGQKMDLVFYTLQIGLFYMDFDLISKSIDKAKKLFEEGG 536
            V +  + L+ L + EG   A   K +  FY    GL       + + +++ +KLFE   
Sbjct: 537 -VLQNRRGLDLLFLKEGGLCA-ALKEECCFYADHTGLVRDSMAKLRERLNQRQKLFESTQ 594

Query: 537 DWERKNRLKVYEGLY 581
            W        +EGL+
Sbjct: 595 GW--------FEGLF 601

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>ENV_MCFF (P15073) Env polyprotein precursor (Coat polyprotein) [Contains:|
           Coat protein GP70; Spike protein p15E; R protein]
          Length = 636

 Score = 32.0 bits (71), Expect = 1.4
 Identities = 31/134 (23%), Positives = 61/134 (45%), Gaps = 5/134 (3%)
 Frame = +3

Query: 195 ATGVLEPDAALLA-----EMRARIDEEIRKLDEKIADAEENLGESEVREAHLAKSLYFVK 359
           A GV     AL+A     +++A +  +++++++ I + E++L  + + E  L        
Sbjct: 460 AAGVGTGTTALVATQQFQQLQAAVHNDLKEVEKSITNLEKSL--TSLSEVAL-------- 509

Query: 360 VGEKEKALEQLKVTEGKTVAIGQKMDLVFYTLQIGLFYMDFDLISKSIDKAKKLFEEGGD 539
             +  + L+ L + EG   A   K +  FY    GL       + + +++ +KLFE G  
Sbjct: 510 --QNRRGLDLLFLKEGGLCA-ALKEECCFYADHTGLVRDSMAKLRERLNQRQKLFESGQG 566

Query: 540 WERKNRLKVYEGLY 581
           W        +EGL+
Sbjct: 567 W--------FEGLF 572

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>ATPF_SYNP6 (P08447) ATP synthase B chain (EC 3.6.3.14) (Subunit I)|
          Length = 171

 Score = 32.0 bits (71), Expect = 1.4
 Identities = 25/83 (30%), Positives = 45/83 (54%), Gaps = 14/83 (16%)
 Frame = +3

Query: 225 LLAEMRARIDEEIRKLDEKIADAEENLGESEVR----EAHLAKSLYFVK---------VG 365
           LL+  RA I+ EIR+++EK+A + + L +++ +    EA  A+ L   K         + 
Sbjct: 47  LLSNRRAAIEAEIREVEEKLASSAQALSQAQTQLKEAEAEAARLLVEAKARAAAVRQEIL 106

Query: 366 EKEKA-LEQLKVTEGKTVAIGQK 431
           +K  A +E+LK T  + V+  Q+
Sbjct: 107 DKAAADVERLKATAAQDVSTEQQ 129

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>ENV_MLVCB (P08360) Env polyprotein precursor (Coat polyprotein) [Contains:|
           Coat protein GP70; Spike protein p15E; R protein]
          Length = 661

 Score = 31.6 bits (70), Expect = 1.8
 Identities = 33/135 (24%), Positives = 61/135 (45%), Gaps = 6/135 (4%)
 Frame = +3

Query: 195 ATGVLEPDAALLA-----EMRARIDEEIRKLDEKIADAEENLGE-SEVREAHLAKSLYFV 356
           A GV     AL+A     +++A +  +++++++ I + E++L   SEV            
Sbjct: 485 AAGVGTGTTALVATQQFQQLQAAMHNDLKEVEKSITNLEKSLTSLSEV------------ 532

Query: 357 KVGEKEKALEQLKVTEGKTVAIGQKMDLVFYTLQIGLFYMDFDLISKSIDKAKKLFEEGG 536
            V +  + L+ L + EG   A   K +  FY    GL       + + +++ +KLFE G 
Sbjct: 533 -VLQNRRGLDLLFLKEGGLCA-ALKEECCFYADHTGLVRDSMAKLRERLNQRQKLFESGQ 590

Query: 537 DWERKNRLKVYEGLY 581
            W        +EGL+
Sbjct: 591 GW--------FEGLF 597

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>SMCA4_HUMAN (P51532) Probable global transcription activator SNF2L4 (EC 3.6.1.-)|
            (ATP-dependent helicase SMARCA4) (SNF2-beta) (BRG-1
            protein) (Mitotic growth and transcription activator)
            (Brahma protein homolog 1) (SWI/SNF-related
            matrix-associated actin
          Length = 1647

 Score = 31.2 bits (69), Expect = 2.4
 Identities = 25/92 (27%), Positives = 43/92 (46%), Gaps = 2/92 (2%)
 Frame = +3

Query: 126  DIRSDVLSAVKSDDMAPLFESLAATGVLEPDAALLAEMRARIDEEIRKLDEKIADA--EE 299
            D+  DV+   ++     L  SL     +  D+ +L  +   + ++I K D+   +   EE
Sbjct: 1524 DLEKDVMLLCQNAQTFNLEGSL-----IYEDSIVLQSVFTSVRQKIEKEDDSEGEESEEE 1578

Query: 300  NLGESEVREAHLAKSLYFVKVGEKEKALEQLK 395
              GE E  E+        +K+G KEKA ++LK
Sbjct: 1579 EEGEEEGSESESRSVKVKIKLGRKEKAQDRLK 1610

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>POTA_MYCPN (P75059) Spermidine/putrescine import ATP-binding protein potA (EC|
           3.6.3.31)
          Length = 560

 Score = 31.2 bits (69), Expect = 2.4
 Identities = 26/90 (28%), Positives = 46/90 (51%), Gaps = 5/90 (5%)
 Frame = +3

Query: 186 SLAATGVLEPDAALLAEMRARIDEEIRKLDEKIADAEENLGESEVREAHLAKSLYFVKV- 362
           +LA + V+EPD  LL E  + +D ++RK          NL + E+++ H    L F+ V 
Sbjct: 358 ALARSLVIEPDILLLDEPLSALDAKVRK----------NL-QKELQKIHQQSGLTFILVT 406

Query: 363 GEKEKAL----EQLKVTEGKTVAIGQKMDL 440
            ++E+AL      + + EG  + +G   D+
Sbjct: 407 HDQEEALVLSNRIVVMNEGNILQVGSPADI 436

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>TPM_CHAFE (Q9N2R3) Tropomyosin (Allergen Cha f 1) (Cha f I) (Fragment)|
          Length = 264

 Score = 30.8 bits (68), Expect = 3.1
 Identities = 22/71 (30%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
 Frame = +3

Query: 231 AEMRA-RIDEEIRKLDEKIADAEENLGESEVREAHLAKSLYFVKVGEKEKALEQLKVTEG 407
           A +RA + +EEIR   +K+   E  L +++ +      S    K+ EKEKAL+     EG
Sbjct: 32  ANLRAEKTEEEIRATQKKMQQVENELDQAQEQ-----LSAANTKLDEKEKALQN---AEG 83

Query: 408 KTVAIGQKMDL 440
           +  A+ +++ L
Sbjct: 84  EVAALNRRIQL 94

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>ENV2_MOUSE (P11370) Retrovirus-related Env polyprotein from Fv-4 locus|
          Length = 679

 Score = 30.8 bits (68), Expect = 3.1
 Identities = 28/117 (23%), Positives = 52/117 (44%), Gaps = 1/117 (0%)
 Frame = +3

Query: 234 EMRARIDEEIRKLDEKIADAEENLGE-SEVREAHLAKSLYFVKVGEKEKALEQLKVTEGK 410
           +++A +  +++ ++E I + E +L   SEV             V +  + L+ L + EG 
Sbjct: 516 QLQAAMHNDLKAVEESITNLERSLTSLSEV-------------VLQNRRGLDLLFLKEGG 562

Query: 411 TVAIGQKMDLVFYTLQIGLFYMDFDLISKSIDKAKKLFEEGGDWERKNRLKVYEGLY 581
             A   K +  FY    GL       + + +++ +KLFE G  W        +EGL+
Sbjct: 563 LCA-ALKEECCFYADHTGLVRDSMAKLRERLNQRQKLFESGQGW--------FEGLF 610

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>MERL_PAPAN (P59750) Merlin (Moesin-ezrin-radixin-like protein)|
           (Neurofibromin-2) (Schwannomin)
          Length = 595

 Score = 30.4 bits (67), Expect = 4.0
 Identities = 31/121 (25%), Positives = 53/121 (43%)
 Frame = +3

Query: 210 EPDAALLAEMRARIDEEIRKLDEKIADAEENLGESEVREAHLAKSLYFVKVGEKEKALEQ 389
           E  A LLAE     +EE + L +K A+AE+ +   +                E+EK L +
Sbjct: 378 EETADLLAEKAQITEEEAKLLAQKAAEAEQEMQRIKATAIRT----------EEEKRLME 427

Query: 390 LKVTEGKTVAIGQKMDLVFYTLQIGLFYMDFDLISKSIDKAKKLFEEGGDWERKNRLKVY 569
            KV E + +A+  KM              + +  +K  D+ K+  +E  + ER+ + K+ 
Sbjct: 428 QKVLEAEVLAL--KM------------AEESERRAKEADQLKQDLQEAREAERRAKQKLL 473

Query: 570 E 572
           E
Sbjct: 474 E 474

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>MERL_HUMAN (P35240) Merlin (Moesin-ezrin-radixin-like protein)|
           (Neurofibromin-2) (Schwannomin) (Schwannomerlin)
          Length = 595

 Score = 30.4 bits (67), Expect = 4.0
 Identities = 31/121 (25%), Positives = 53/121 (43%)
 Frame = +3

Query: 210 EPDAALLAEMRARIDEEIRKLDEKIADAEENLGESEVREAHLAKSLYFVKVGEKEKALEQ 389
           E  A LLAE     +EE + L +K A+AE+ +   +                E+EK L +
Sbjct: 378 EETADLLAEKAQITEEEAKLLAQKAAEAEQEMQRIKATAIRT----------EEEKRLME 427

Query: 390 LKVTEGKTVAIGQKMDLVFYTLQIGLFYMDFDLISKSIDKAKKLFEEGGDWERKNRLKVY 569
            KV E + +A+  KM              + +  +K  D+ K+  +E  + ER+ + K+ 
Sbjct: 428 QKVLEAEVLAL--KM------------AEESERRAKEADQLKQDLQEAREAERRAKQKLL 473

Query: 570 E 572
           E
Sbjct: 474 E 474

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>ZN365_RAT (Q5PQS2) Protein ZNF365|
          Length = 408

 Score = 30.4 bits (67), Expect = 4.0
 Identities = 28/97 (28%), Positives = 47/97 (48%), Gaps = 2/97 (2%)
 Frame = +3

Query: 105 VDDLSKVDIRSDVLSAVKSDDMAPLFESLAA--TGVLEPDAALLAEMRARIDEEIRKLDE 278
           V   + VDIR+D L A +S    P  ++ AA    V E    ++  +   I++ I KL +
Sbjct: 127 VQTYTAVDIRADSLDAPRSSSGLPTQDTKAAFEAHVREKFNRMVEAVDRTIEKRIDKLTK 186

Query: 279 KIADAEENLGESEVREAHLAKSLYFVKVGEKEKALEQ 389
           ++A     L   EVR A +  +    +V  +E+AL +
Sbjct: 187 ELAQKTAEL--LEVRAAFVQLTQKKQEVQRRERALHK 221

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>MERL_RAT (Q63648) Merlin (Moesin-ezrin-radixin-like protein)|
           (Neurofibromin-2) (Schwannomin) (Fragment)
          Length = 586

 Score = 30.4 bits (67), Expect = 4.0
 Identities = 31/121 (25%), Positives = 53/121 (43%)
 Frame = +3

Query: 210 EPDAALLAEMRARIDEEIRKLDEKIADAEENLGESEVREAHLAKSLYFVKVGEKEKALEQ 389
           E  A LLAE     +EE + L +K A+AE+ +   +                E+EK L +
Sbjct: 374 EETADLLAEKAQITEEEAKLLAQKAAEAEQEMQRIKATAIRT----------EEEKRLME 423

Query: 390 LKVTEGKTVAIGQKMDLVFYTLQIGLFYMDFDLISKSIDKAKKLFEEGGDWERKNRLKVY 569
            KV E + +A+  KM              + +  +K  D+ K+  +E  + ER+ + K+ 
Sbjct: 424 QKVLEAEVLAL--KM------------AEESERRAKEADQLKQDLQEAREAERRAKQKLL 469

Query: 570 E 572
           E
Sbjct: 470 E 470

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>SYTM_ARATH (O04630) Threonyl-tRNA synthetase, mitochondrial precursor (EC|
           6.1.1.3) (Threonine--tRNA ligase) (ThrRS)
          Length = 709

 Score = 30.4 bits (67), Expect = 4.0
 Identities = 20/72 (27%), Positives = 35/72 (48%), Gaps = 8/72 (11%)
 Frame = +3

Query: 207 LEPDAALLAEMRARIDEEIRKLDEKIADA--------EENLGESEVREAHLAKSLYFVKV 362
           + P  A++  +  +  +   K+ ++I DA         +   + +VREA LA+  Y + V
Sbjct: 610 ISPRQAIVCPISEKSQQYAEKVQKQIKDAGFYVDADLTDRKIDKKVREAQLAQYNYILVV 669

Query: 363 GEKEKALEQLKV 398
           GE E A  Q+ V
Sbjct: 670 GETEAATGQVSV 681

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>ENV_MSVFB (P03387) Env polyprotein (Coat polyprotein) [Contains: Coat protein|
           GP70; Spike protein p15E; R protein] (Fragment)
          Length = 211

 Score = 30.4 bits (67), Expect = 4.0
 Identities = 33/135 (24%), Positives = 60/135 (44%), Gaps = 6/135 (4%)
 Frame = +3

Query: 195 ATGVLEPDAALLA-----EMRARIDEEIRKLDEKIADAEENLGE-SEVREAHLAKSLYFV 356
           A GV     AL+A     +++A + ++++K+++ I + E++L   SEV            
Sbjct: 30  AAGVGTGTTALVATQQFQQLQAAMHDDLKKVEKSITNLEKSLTSLSEV------------ 77

Query: 357 KVGEKEKALEQLKVTEGKTVAIGQKMDLVFYTLQIGLFYMDFDLISKSIDKAKKLFEEGG 536
            V +  + L+ L + EG   A   K +  FY    GL       + + + + +KLFE   
Sbjct: 78  -VLQNRRGLDLLFLKEGGLCA-ALKEECCFYADHTGLVRDSMAKLRERLSQRQKLFESQQ 135

Query: 537 DWERKNRLKVYEGLY 581
            W        +EGL+
Sbjct: 136 GW--------FEGLF 142

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>MYH14_MOUSE (Q6URW6) Myosin-14 (Myosin heavy chain, nonmuscle IIc) (Nonmuscle|
            myosin heavy chain IIc) (NMHC II-C)
          Length = 2000

 Score = 30.4 bits (67), Expect = 4.0
 Identities = 28/75 (37%), Positives = 37/75 (49%), Gaps = 11/75 (14%)
 Frame = +3

Query: 228  LAEMRARIDEE-----------IRKLDEKIADAEENLGESEVREAHLAKSLYFVKVGEKE 374
            + E+RAR+ EE           I  L+ K+A AEE L E E RE  L+  L  V+  EK 
Sbjct: 1815 IQELRARLGEEDAGARARQKMLIAALESKLAQAEEQL-EQESRERILSGKL--VRRAEKR 1871

Query: 375  KALEQLKVTEGKTVA 419
                 L+V E + VA
Sbjct: 1872 LKEVVLQVDEERRVA 1886

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>MERL_MOUSE (P46662) Merlin (Moesin-ezrin-radixin-like protein)|
           (Neurofibromin-2) (Schwannomin)
          Length = 596

 Score = 30.4 bits (67), Expect = 4.0
 Identities = 31/121 (25%), Positives = 53/121 (43%)
 Frame = +3

Query: 210 EPDAALLAEMRARIDEEIRKLDEKIADAEENLGESEVREAHLAKSLYFVKVGEKEKALEQ 389
           E  A LLAE     +EE + L +K A+AE+ +   +                E+EK L +
Sbjct: 378 EETADLLAEKAQITEEEAKLLAQKAAEAEQEMQRIKATAIRT----------EEEKRLME 427

Query: 390 LKVTEGKTVAIGQKMDLVFYTLQIGLFYMDFDLISKSIDKAKKLFEEGGDWERKNRLKVY 569
            KV E + +A+  KM              + +  +K  D+ K+  +E  + ER+ + K+ 
Sbjct: 428 QKVLEAEVLAL--KM------------AEESERRAKEADQLKQDLQEAREAERRAKQKLL 473

Query: 570 E 572
           E
Sbjct: 474 E 474

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>POTA_MYCGE (P47288) Spermidine/putrescine import ATP-binding protein potA (EC|
           3.6.3.31)
          Length = 559

 Score = 30.4 bits (67), Expect = 4.0
 Identities = 25/90 (27%), Positives = 47/90 (52%), Gaps = 5/90 (5%)
 Frame = +3

Query: 186 SLAATGVLEPDAALLAEMRARIDEEIRKLDEKIADAEENLGESEVREAHLAKSLYFVKV- 362
           +LA + V+EP+  LL E  + +D ++RK          NL + E+++ H    L F+ V 
Sbjct: 357 ALARSLVVEPEILLLDEPLSALDAKVRK----------NL-QKELQQIHKKSGLTFILVT 405

Query: 363 GEKEKAL----EQLKVTEGKTVAIGQKMDL 440
            ++E+AL      + + EG  + +G  +D+
Sbjct: 406 HDQEEALVLSDRIVVMNEGNILQVGNPVDI 435

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>ORC2_MOUSE (Q60862) Origin recognition complex subunit 2|
          Length = 576

 Score = 30.4 bits (67), Expect = 4.0
 Identities = 24/93 (25%), Positives = 42/93 (45%), Gaps = 12/93 (12%)
 Frame = +3

Query: 159 SDDMAPLFESLAATGVLEPDAALLAEMRARIDEE-----IRKL-------DEKIADAEEN 302
           SD +   FE+ +++ VL  D  L    RAR+D++     +RK         E++    E 
Sbjct: 236 SDLVEEYFEAHSSSKVLTSDRTLQRLRRARVDQKTLHNLLRKFVPSFSAEIERLNQQHEK 295

Query: 303 LGESEVREAHLAKSLYFVKVGEKEKALEQLKVT 401
           L    + + HL  ++    +G K   LE+ + T
Sbjct: 296 LFHKWMLQLHLGFNIVLYGLGSKRDLLEKFRTT 328

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>YGCJ_ECOLI (Q46899) Hypothetical protein ygcJ|
          Length = 363

 Score = 30.4 bits (67), Expect = 4.0
 Identities = 23/82 (28%), Positives = 45/82 (54%), Gaps = 6/82 (7%)
 Frame = +3

Query: 207 LEPDAALLAEMRARIDEE-IRKLDEKIADAEENLGESEVREAHLA--KSLYFVKVGEK-- 371
           ++ DA    + R RI  + +++   K     +N+GES +R  HLA  + +   K+GE+  
Sbjct: 25  MQKDAIFGGKRRVRISSQSLKRAMRKSGYYAQNIGESSLRTIHLAQLRDVLRQKLGERFD 84

Query: 372 EKALEQ-LKVTEGKTVAIGQKM 434
           +K +++ L +  GK+V   +K+
Sbjct: 85  QKIIDKTLALLSGKSVDEAEKI 106

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>GCC2_MOUSE (Q8CHG3) GRIP and coiled-coil domain-containing protein 2 (Golgi|
           coiled coil protein GCC185)
          Length = 1679

 Score = 30.4 bits (67), Expect = 4.0
 Identities = 24/100 (24%), Positives = 45/100 (45%), Gaps = 2/100 (2%)
 Frame = +3

Query: 273 DEKIADAEENLGESE--VREAHLAKSLYFVKVGEKEKALEQLKVTEGKTVAIGQKMDLVF 446
           +EK+   +E + E E  ++      S+Y   +G+K+  L++L   E K  ++ ++ D   
Sbjct: 539 NEKLLSQQELVPELESTIKNLQADNSMYLASLGQKDTMLQEL---EAKISSLAKEKD--- 592

Query: 447 YTLQIGLFYMDFDLISKSIDKAKKLFEEGGDWERKNRLKV 566
                       D ISK     +++ +    WER+ RL V
Sbjct: 593 ------------DFISKIKTSHEEMDDLHQKWEREQRLSV 620

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>SYCP1_HUMAN (Q15431) Synaptonemal complex protein 1 (SCP-1)|
          Length = 976

 Score = 30.4 bits (67), Expect = 4.0
 Identities = 23/69 (33%), Positives = 35/69 (50%), Gaps = 5/69 (7%)
 Frame = +3

Query: 225 LLAEMRARIDEEIRKLDEKIADAEENLGESEVREAHLAKSLYFVKVG-----EKEKALEQ 389
           LL E R    +++ +L+EK     ENL +S  ++ HL K L  +KV        +KALE+
Sbjct: 288 LLEESR----DKVNQLEEKTKLQSENLKQSIEKQHHLTKELEDIKVSLQRSVSTQKALEE 343

Query: 390 LKVTEGKTV 416
                 KT+
Sbjct: 344 DLQIATKTI 352

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>BAG_STRAG (P27951) IgA FC receptor precursor (Beta antigen) (B antigen)|
          Length = 1164

 Score = 30.4 bits (67), Expect = 4.0
 Identities = 28/108 (25%), Positives = 49/108 (45%), Gaps = 2/108 (1%)
 Frame = +3

Query: 93  SHPDVDDLSKV--DIRSDVLSAVKSDDMAPLFESLAATGVLEPDAALLAEMRARIDEEIR 266
           ++ D D + K   DIR     A K +D        A   V E    L +  +A +D+EI+
Sbjct: 215 TNEDKDSMLKKIEDIRKQAQQADKKED--------AEVKVREELGKLFSSTKAGLDQEIQ 266

Query: 267 KLDEKIADAEENLGESEVREAHLAKSLYFVKVGEKEKALEQLKVTEGK 410
           +  +K   +EEN  + +   A+  ++L    + E +KA    + T+ K
Sbjct: 267 EHVKKETSSEENTQKVDEHYANSLQNLAQKSLEELDKATTNEQATQVK 314

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>ENV_MLVF5 (P03390) Env polyprotein precursor [Contains: Coat protein GP70;|
           Spike protein p15E; R protein]
          Length = 675

 Score = 30.0 bits (66), Expect = 5.3
 Identities = 32/135 (23%), Positives = 59/135 (43%), Gaps = 6/135 (4%)
 Frame = +3

Query: 195 ATGVLEPDAALLA-----EMRARIDEEIRKLDEKIADAEENLGE-SEVREAHLAKSLYFV 356
           A GV     AL+A     ++ A + ++++++++ I + E++L   SEV            
Sbjct: 499 AAGVGTGTTALVATQQFQQLHAAVQDDLKEVEKSITNLEKSLTSLSEV------------ 546

Query: 357 KVGEKEKALEQLKVTEGKTVAIGQKMDLVFYTLQIGLFYMDFDLISKSIDKAKKLFEEGG 536
            V +  + L+ L + EG   A   K +  FY    GL       + + + + +KLFE   
Sbjct: 547 -VLQNRRGLDLLFLKEGGLCA-ALKEECCFYADHTGLVRDSMAKLRERLTQRQKLFESSQ 604

Query: 537 DWERKNRLKVYEGLY 581
            W        +EGL+
Sbjct: 605 GW--------FEGLF 611

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>IFB2_CAEEL (Q19286) Intermediate filament protein ifb-2 (Intermediate filament|
           protein B2) (IF-B2) (Cel IF B2)
          Length = 543

 Score = 30.0 bits (66), Expect = 5.3
 Identities = 18/72 (25%), Positives = 40/72 (55%), Gaps = 4/72 (5%)
 Frame = +3

Query: 183 ESLAATGVLEPDAALLAEMRARI--DEEIRKLDEKIADAEENLGESEVREAHLAK--SLY 350
           E++  + +   +++++++  A +   EEIRK++E I      L E E R + L +  +  
Sbjct: 265 ETIFQSKISAVESSIVSKNEAAVFRQEEIRKMNESITTLRAKLSELEARNSALEREANTL 324

Query: 351 FVKVGEKEKALE 386
            +++GE ++A E
Sbjct: 325 QIQLGEDQRAYE 336

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>SLAP_BACCI (P35824) S-layer-related protein precursor|
          Length = 1616

 Score = 30.0 bits (66), Expect = 5.3
 Identities = 12/25 (48%), Positives = 13/25 (52%)
 Frame = +1

Query: 193  PPRACWSRTPHCSPRCAPGSTRRSA 267
            P R  W+R P CS  C P S R  A
Sbjct: 1398 PRRWSWTRPPECSASCPPASNRPGA 1422

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>IF3A_CAEEL (P34339) Probable eukaryotic translation initiation factor 3|
           subunit 10 (eIF-3 theta) (eIF3a) (Egg-laying defective
           protein 45)
          Length = 1076

 Score = 30.0 bits (66), Expect = 5.3
 Identities = 23/82 (28%), Positives = 41/82 (50%), Gaps = 2/82 (2%)
 Frame = +3

Query: 192 AATGVLEPDAALLAEMRARIDEEIRKLDEKIADAEENLGESEVREAHLAKSLYFVKVGE- 368
           AAT   + + A  AE   R+DE+ ++ + K   AE++  + ++++  L K        E 
Sbjct: 604 AATEQAKREEAARAEEMKRLDEQNKESERKRKQAEQDEIQKKIKQDQLYKMQQNAIYQEI 663

Query: 369 -KEKALEQLKVTEGKTVAIGQK 431
            KEK LEQ +  + + V   Q+
Sbjct: 664 IKEKGLEQFRDMDPEQVLREQR 685

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>BRE1_YARLI (Q6CF78) Ubiquitin-protein ligase BRE1 (EC 6.3.2.-)|
          Length = 700

 Score = 30.0 bits (66), Expect = 5.3
 Identities = 21/76 (27%), Positives = 35/76 (46%)
 Frame = +3

Query: 216 DAALLAEMRARIDEEIRKLDEKIADAEENLGESEVREAHLAKSLYFVKVGEKEKALEQLK 395
           D   L E     +E++++LD KIA  E        + A L++S      G  + A EQL 
Sbjct: 259 DTKALRETIQVQEEQMKELDAKIAALEHEASLFNAKMADLSESDLLDHSGAFKAAKEQLS 318

Query: 396 VTEGKTVAIGQKMDLV 443
              G+ +A+ +  D +
Sbjct: 319 DKTGQILALEKSRDAI 334

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>TPM_HOMAM (O44119) Tropomyosin (Allergen Hom a 1)|
          Length = 284

 Score = 30.0 bits (66), Expect = 5.3
 Identities = 23/72 (31%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
 Frame = +3

Query: 231 AEMRA-RIDEEIRKLDEKIADAEENLGESEVREAHLAKSLYFVKVGEKEKALEQLKVTEG 407
           A +RA + +EEIR   +K+   E  L + + +      SL   K+ EKEKAL+     EG
Sbjct: 32  ANIRAEKTEEEIRITHKKMQQVENELDQVQEQ-----LSLANTKLEEKEKALQN---AEG 83

Query: 408 KTVAIGQKMDLV 443
           +  A+ +++ L+
Sbjct: 84  EVAALNRRIQLL 95

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>ENV_RMCFV (P06445) Env polyprotein precursor (Coat polyprotein) [Contains:|
           Coat protein GP70; Coat protein p12E; Spike protein
           p15E]
          Length = 640

 Score = 30.0 bits (66), Expect = 5.3
 Identities = 32/135 (23%), Positives = 59/135 (43%), Gaps = 6/135 (4%)
 Frame = +3

Query: 195 ATGVLEPDAALLA-----EMRARIDEEIRKLDEKIADAEENLGE-SEVREAHLAKSLYFV 356
           A GV     AL+A     ++ A + ++++++++ I + E++L   SEV            
Sbjct: 463 AAGVGTGTTALVATQQFQQLHAAVQDDLKEVEKSITNLEKSLTSLSEV------------ 510

Query: 357 KVGEKEKALEQLKVTEGKTVAIGQKMDLVFYTLQIGLFYMDFDLISKSIDKAKKLFEEGG 536
            V +  + L+ L + EG   A   K +  FY    GL       + + + + +KLFE   
Sbjct: 511 -VLQNRRGLDLLFLKEGGLCA-ALKEECCFYADHTGLVRDSMAKLRERLTQRQKLFESSQ 568

Query: 537 DWERKNRLKVYEGLY 581
            W        +EGL+
Sbjct: 569 GW--------FEGLF 575

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>YKQ9_CAEEL (P34304) Hypothetical protein C06E1.9|
          Length = 643

 Score = 30.0 bits (66), Expect = 5.3
 Identities = 30/116 (25%), Positives = 51/116 (43%), Gaps = 9/116 (7%)
 Frame = +3

Query: 102 DVDDLSKVDIRS---------DVLSAVKSDDMAPLFESLAATGVLEPDAALLAEMRARID 254
           +++ L++ D R+         +  SA     +AP+      +  ++  A L A   A   
Sbjct: 409 EIEKLARADKRAKDEETRKNNETKSASNLFSLAPILSDRPPSPPVDQQAELRAHAEAYRT 468

Query: 255 EEIRKLDEKIADAEENLGESEVREAHLAKSLYFVKVGEKEKALEQLKVTEGKTVAI 422
             + KL +  ADA      SE + A  A++L  +   +K  AL  LK++E   VAI
Sbjct: 469 SVLTKLQKIRADAAGPSSPSE-KIAVDAENLVPLATSKKYSALNSLKISEADKVAI 523

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>GUN_BACS1 (P06564) Endoglucanase precursor (EC 3.2.1.4)|
           (Endo-1,4-beta-glucanase) (Alkaline cellulase)
          Length = 800

 Score = 30.0 bits (66), Expect = 5.3
 Identities = 19/58 (32%), Positives = 29/58 (50%)
 Frame = +3

Query: 126 DIRSDVLSAVKSDDMAPLFESLAATGVLEPDAALLAEMRARIDEEIRKLDEKIADAEE 299
           D+ SD    V  D++   FE  A T  +EP+     E    +DE+  K ++K A+ EE
Sbjct: 742 DVESDFAGRVFVDNVR--FEGAATTEPVEPEPVDPGEETPPVDEKEAKTEQKEAEKEE 797

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>ENV_MLVFP (P26803) Env polyprotein precursor [Contains: Coat protein GP70;|
           Spike protein p15E; R protein]
          Length = 676

 Score = 30.0 bits (66), Expect = 5.3
 Identities = 32/135 (23%), Positives = 59/135 (43%), Gaps = 6/135 (4%)
 Frame = +3

Query: 195 ATGVLEPDAALLA-----EMRARIDEEIRKLDEKIADAEENLGE-SEVREAHLAKSLYFV 356
           A GV     AL+A     ++ A + ++++++++ I + E++L   SEV            
Sbjct: 499 AAGVGTGTTALVATQQFQQLHAAVQDDLKEVEKSITNLEKSLTSLSEV------------ 546

Query: 357 KVGEKEKALEQLKVTEGKTVAIGQKMDLVFYTLQIGLFYMDFDLISKSIDKAKKLFEEGG 536
            V +  + L+ L + EG   A   K +  FY    GL       + + + + +KLFE   
Sbjct: 547 -VLQNRRGLDLLFLKEGGLCA-ALKEECCFYADHTGLVRDSMAKLRERLTQRQKLFESSQ 604

Query: 537 DWERKNRLKVYEGLY 581
            W        +EGL+
Sbjct: 605 GW--------FEGLF 611

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>NPS12_ARATH (Q9LNH6) Novel plant SNARE 12 (AtNPSN12)|
          Length = 265

 Score = 30.0 bits (66), Expect = 5.3
 Identities = 23/84 (27%), Positives = 40/84 (47%), Gaps = 2/84 (2%)
 Frame = +3

Query: 291 AEENLGESEVREAHLAKSLYFVKVGEKEKALEQLKVTEGKTVAIGQKM--DLVFYTLQIG 464
           AEEN+  +              ++ E ++A+E+ K    +T+ +G +   +L   T Q+G
Sbjct: 126 AEENVQMASTMSNQELVDAGMKRMDETDQAIERSKQVVHQTLEVGTQTASNLKGQTDQMG 185

Query: 465 LFYMDFDLISKSIDKAKKLFEEGG 536
               D D I  S+ KA +L +E G
Sbjct: 186 RVVNDLDTIQFSLKKASQLVKEIG 209

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>ENV_MLVKI (P04502) Env polyprotein (Coat polyprotein) [Contains: Coat protein|
           GP70; Spike protein p15E; R protein] (Fragment)
          Length = 201

 Score = 30.0 bits (66), Expect = 5.3
 Identities = 33/135 (24%), Positives = 60/135 (44%), Gaps = 6/135 (4%)
 Frame = +3

Query: 195 ATGVLEPDAALLA-----EMRARIDEEIRKLDEKIADAEENLGE-SEVREAHLAKSLYFV 356
           A GV     AL+A     +++A I ++++++++ I + E++L   SEV            
Sbjct: 27  AAGVGTGTTALVATQQFQQLQAAIHDDLKEVEKSITNLEKSLTSLSEV------------ 74

Query: 357 KVGEKEKALEQLKVTEGKTVAIGQKMDLVFYTLQIGLFYMDFDLISKSIDKAKKLFEEGG 536
            V +  + L+ L + EG   A   K +  FY    GL       + + + + +KLFE   
Sbjct: 75  -VLQNRRGLDLLFLKEGGLCA-ALKEECCFYADHTGLVRDSMAKLRERLSQRQKLFESQQ 132

Query: 537 DWERKNRLKVYEGLY 581
            W        +EGL+
Sbjct: 133 GW--------FEGLF 139

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>SYV_METCA (Q606C1) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)|
            (ValRS)
          Length = 921

 Score = 29.6 bits (65), Expect = 6.9
 Identities = 31/94 (32%), Positives = 46/94 (48%), Gaps = 25/94 (26%)
 Frame = +3

Query: 174  PLFESLA--------ATGVLEPDAA--LLAEMRA---------------RIDEEIRKLDE 278
            PL E LA        A G  EP+AA  L+ E+R                R+D+EI++LD+
Sbjct: 812  PLLEKLARLESLNWLAPGQAEPEAAIALVGELRVLIPMRGLIDKEAELTRLDKEIQRLDK 871

Query: 279  KIADAEENLGESEVREAHLAKSLYFVKVGEKEKA 380
            ++   E  LG++    + L+K+     V EKEKA
Sbjct: 872  ELPRLEGKLGDA----SFLSKAP--PAVVEKEKA 899

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>GAS7_RAT (O55148) Growth-arrest-specific protein 7 (GAS-7)|
          Length = 422

 Score = 29.6 bits (65), Expect = 6.9
 Identities = 15/57 (26%), Positives = 26/57 (45%)
 Frame = +3

Query: 228 LAEMRARIDEEIRKLDEKIADAEENLGESEVREAHLAKSLYFVKVGEKEKALEQLKV 398
           L   R    ++++K D  IAD  + LGES       A+     +  + E   +QL++
Sbjct: 249 LMNFRENFKKDMKKCDHHIADLRKQLGESRYASVEKARKALTERQKDLEMKTQQLEI 305

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>ENV_MLVFF (P26804) Env polyprotein precursor [Contains: Coat protein GP70;|
           Spike protein p15E; R protein]
          Length = 676

 Score = 29.6 bits (65), Expect = 6.9
 Identities = 29/122 (23%), Positives = 54/122 (44%), Gaps = 6/122 (4%)
 Frame = +3

Query: 195 ATGVLEPDAALLA-----EMRARIDEEIRKLDEKIADAEENLGE-SEVREAHLAKSLYFV 356
           A GV     AL+A     ++ A + ++++++++ I + E++L   SEV            
Sbjct: 499 AAGVGTGTTALVATQQFQQLHAAVQDDLKEVEKSITNLEKSLTSLSEV------------ 546

Query: 357 KVGEKEKALEQLKVTEGKTVAIGQKMDLVFYTLQIGLFYMDFDLISKSIDKAKKLFEEGG 536
            V +  + L+ L + EG   A   K +  FY    GL       + + + + +KLFE   
Sbjct: 547 -VLQNRRGLDLLFLKEGGLCA-ALKEECCFYADHTGLVRDSMAKLRERLSQRQKLFESSQ 604

Query: 537 DW 542
            W
Sbjct: 605 GW 606

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>BRE1A_CHICK (Q5ZLS3) Ubiquitin-protein ligase BRE1A (EC 6.3.2.-) (BRE1-A) (RING|
           finger protein 20)
          Length = 984

 Score = 29.6 bits (65), Expect = 6.9
 Identities = 20/69 (28%), Positives = 32/69 (46%)
 Frame = +3

Query: 231 AEMRARIDEEIRKLDEKIADAEENLGESEVREAHLAKSLYFVKVGEKEKALEQLKVTEGK 410
           +E++AR DEE R+ + +  + E    + + RE    K     +  EK+K  E  K  E K
Sbjct: 558 SEVKARRDEEERERERREREREREKEKEKEREREKEKEKEKEREREKQKQKESEKERESK 617

Query: 411 TVAIGQKMD 437
               G+  D
Sbjct: 618 EKEKGKHED 626

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>HBHA_MYCTU (P0A5P6) Heparin-binding hemagglutinin (Adhesin)|
          Length = 198

 Score = 29.3 bits (64), Expect = 9.0
 Identities = 26/102 (25%), Positives = 47/102 (46%), Gaps = 12/102 (11%)
 Frame = +3

Query: 126 DIRSDVLSAVKSDDMAPLFESLAATGVLEPDAALLAEMRARIDEEIRK-------LDEKI 284
           DI++ +L+A+ + D+A    +   T + E       + R+R++E   +       L E++
Sbjct: 8   DIKAPLLAALGAADLALATVNELITNLRERAEETRTDTRSRVEESRARLTKLQEDLPEQL 67

Query: 285 ADAEENLGESEVREA-----HLAKSLYFVKVGEKEKALEQLK 395
            +  E     E+R+A       A S Y   V   E ALE+L+
Sbjct: 68  TELREKFTAEELRKAAEGYLEAATSRYNELVERGEAALERLR 109

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>HBHA_MYCBO (P0A5P7) Heparin-binding hemagglutinin (Adhesin)|
          Length = 198

 Score = 29.3 bits (64), Expect = 9.0
 Identities = 26/102 (25%), Positives = 47/102 (46%), Gaps = 12/102 (11%)
 Frame = +3

Query: 126 DIRSDVLSAVKSDDMAPLFESLAATGVLEPDAALLAEMRARIDEEIRK-------LDEKI 284
           DI++ +L+A+ + D+A    +   T + E       + R+R++E   +       L E++
Sbjct: 8   DIKAPLLAALGAADLALATVNELITNLRERAEETRTDTRSRVEESRARLTKLQEDLPEQL 67

Query: 285 ADAEENLGESEVREA-----HLAKSLYFVKVGEKEKALEQLK 395
            +  E     E+R+A       A S Y   V   E ALE+L+
Sbjct: 68  TELREKFTAEELRKAAEGYLEAATSRYNELVERGEAALERLR 109

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>YKI5_CAEEL (P46012) Hypothetical protein C01G6.5|
          Length = 952

 Score = 29.3 bits (64), Expect = 9.0
 Identities = 30/115 (26%), Positives = 50/115 (43%), Gaps = 11/115 (9%)
 Frame = +3

Query: 93   SHPDVDDLSKVDIRSDVLSAVKSDDMAPLFESLAATGVLEPDAALLAEMRARIDEEIRKL 272
            S  + D    VD  SD     +S  +    ++L+AT    P  +   + +     ++++L
Sbjct: 687  SKENTDQKRAVDDSSD-----ESARLVKQIKALSATPSSTPAESSKRKQKDTSSRKMKQL 741

Query: 273  DEKIADAE-ENLGES----------EVREAHLAKSLYFVKVGEKEKALEQLKVTE 404
            DE  AD++ E+ G S            R   + KS    KVG+KEK +E    T+
Sbjct: 742  DESSADSDSEDDGRSGDKSTKRRDKARRSTRIGKSTPAKKVGKKEKVVEDEDETD 796

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>PFDA_PYRFU (Q8U3T0) Prefoldin alpha subunit (GimC alpha subunit)|
          Length = 146

 Score = 29.3 bits (64), Expect = 9.0
 Identities = 14/31 (45%), Positives = 19/31 (61%)
 Frame = +3

Query: 249 IDEEIRKLDEKIADAEENLGESEVREAHLAK 341
           +DE I++ DE I   +E L E + R A LAK
Sbjct: 99  LDERIKEYDEAIRKTQEALNELQKRAAELAK 129


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 66,954,825
Number of Sequences: 219361
Number of extensions: 1251878
Number of successful extensions: 5666
Number of sequences better than 10.0: 66
Number of HSP's better than 10.0 without gapping: 5424
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5649
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5196311029
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result