ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal8m06 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AB042240.3| Triticum aestivum chloroplast DNA, complete genome Length = 134545 Score = 1152 bits (581), Expect = 0.0 Identities = 584/585 (99%) Strand = Plus / Minus Query: 2 aagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 61 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119716 aagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 119657 Query: 62 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119656 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 119597 Query: 122 gtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctg 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119596 gtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctg 119537 Query: 182 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119536 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 119477 Query: 242 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119476 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 119417 Query: 302 gcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119416 gcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 119357 Query: 362 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119356 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 119297 Query: 422 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119296 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 119237 Query: 482 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119236 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 119177 Query: 542 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 586 ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119176 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 119132 Score = 1152 bits (581), Expect = 0.0 Identities = 584/585 (99%) Strand = Plus / Plus Query: 2 aagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 61 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95178 aagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 95237 Query: 62 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95238 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 95297 Query: 122 gtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctg 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95298 gtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctg 95357 Query: 182 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95358 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 95417 Query: 242 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95418 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 95477 Query: 302 gcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95478 gcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 95537 Query: 362 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95538 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 95597 Query: 422 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95598 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 95657 Query: 482 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95658 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 95717 Query: 542 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 586 ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95718 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 95762
>gb|AC112514.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0023M11, complete sequence Length = 120228 Score = 1144 bits (577), Expect = 0.0 Identities = 583/585 (99%) Strand = Plus / Minus Query: 2 aagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 61 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118497 aagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 118438 Query: 62 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118437 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 118378 Query: 122 gtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctg 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118377 gtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctg 118318 Query: 182 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118317 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 118258 Query: 242 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118257 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 118198 Query: 302 gcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 361 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118197 gcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 118138 Query: 362 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118137 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 118078 Query: 422 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118077 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 118018 Query: 482 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118017 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 117958 Query: 542 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 586 ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117957 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 117913
>gb|AY522330.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare chloroplast, complete genome Length = 134551 Score = 1144 bits (577), Expect = 0.0 Identities = 583/585 (99%) Strand = Plus / Minus Query: 2 aagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 61 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119581 aagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 119522 Query: 62 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119521 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 119462 Query: 122 gtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctg 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119461 gtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctg 119402 Query: 182 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119401 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 119342 Query: 242 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119341 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 119282 Query: 302 gcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 361 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119281 gcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 119222 Query: 362 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119221 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 119162 Query: 422 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119161 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 119102 Query: 482 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119101 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 119042 Query: 542 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 586 ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119041 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 118997 Score = 1144 bits (577), Expect = 0.0 Identities = 583/585 (99%) Strand = Plus / Plus Query: 2 aagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 61 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95575 aagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 95634 Query: 62 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95635 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 95694 Query: 122 gtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctg 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95695 gtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctg 95754 Query: 182 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95755 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 95814 Query: 242 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95815 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 95874 Query: 302 gcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 361 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95875 gcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 95934 Query: 362 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95935 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 95994 Query: 422 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95995 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 96054 Query: 482 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96055 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 96114 Query: 542 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 586 ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96115 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 96159
>gb|AY522331.1| Oryza sativa (japonica cultivar-group) isolate PA64S chloroplast, complete genome Length = 134551 Score = 1144 bits (577), Expect = 0.0 Identities = 583/585 (99%) Strand = Plus / Minus Query: 2 aagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 61 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119581 aagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 119522 Query: 62 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119521 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 119462 Query: 122 gtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctg 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119461 gtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctg 119402 Query: 182 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119401 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 119342 Query: 242 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119341 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 119282 Query: 302 gcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 361 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119281 gcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 119222 Query: 362 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119221 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 119162 Query: 422 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119161 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 119102 Query: 482 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119101 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 119042 Query: 542 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 586 ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119041 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 118997 Score = 1144 bits (577), Expect = 0.0 Identities = 583/585 (99%) Strand = Plus / Plus Query: 2 aagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 61 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95575 aagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 95634 Query: 62 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95635 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 95694 Query: 122 gtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctg 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95695 gtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctg 95754 Query: 182 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95755 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 95814 Query: 242 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95815 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 95874 Query: 302 gcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 361 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95875 gcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 95934 Query: 362 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95935 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 95994 Query: 422 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95995 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 96054 Query: 482 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96055 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 96114 Query: 542 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 586 ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96115 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 96159
>gb|AY522329.1| Oryza sativa (indica cultivar-group) isolate 93-11 chloroplast, complete genome Length = 134496 Score = 1144 bits (577), Expect = 0.0 Identities = 583/585 (99%) Strand = Plus / Minus Query: 2 aagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 61 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119530 aagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 119471 Query: 62 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119470 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 119411 Query: 122 gtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctg 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119410 gtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctg 119351 Query: 182 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119350 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 119291 Query: 242 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119290 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 119231 Query: 302 gcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 361 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119230 gcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 119171 Query: 362 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119170 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 119111 Query: 422 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119110 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 119051 Query: 482 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119050 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 118991 Query: 542 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 586 ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118990 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 118946 Score = 1144 bits (577), Expect = 0.0 Identities = 583/585 (99%) Strand = Plus / Plus Query: 2 aagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 61 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95520 aagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 95579 Query: 62 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95580 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 95639 Query: 122 gtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctg 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95640 gtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctg 95699 Query: 182 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95700 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 95759 Query: 242 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95760 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 95819 Query: 302 gcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 361 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95820 gcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 95879 Query: 362 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95880 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 95939 Query: 422 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95940 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 95999 Query: 482 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96000 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 96059 Query: 542 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 586 ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96060 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 96104
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 1144 bits (577), Expect = 0.0 Identities = 583/585 (99%) Strand = Plus / Plus Query: 2 aagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 61 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508153 aagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 31508212 Query: 62 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508213 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 31508272 Query: 122 gtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctg 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508273 gtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctg 31508332 Query: 182 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508333 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 31508392 Query: 242 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508393 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 31508452 Query: 302 gcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 361 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508453 gcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 31508512 Query: 362 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508513 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 31508572 Query: 422 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508573 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 31508632 Query: 482 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508633 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 31508692 Query: 542 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 586 ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508693 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 31508737 Score = 44.1 bits (22), Expect = 0.51 Identities = 31/34 (91%) Strand = Plus / Plus Query: 552 gcgagcggtaccaaatcgaggcaaactctgaata 585 |||| ||||||||||||||| |||||| |||||| Sbjct: 35945442 gcgaacggtaccaaatcgagacaaactttgaata 35945475
>gb|AC107207.9| Oryza sativa chromosome 3 BAC OSJNBb0106M04 genomic sequence, complete sequence Length = 133449 Score = 1144 bits (577), Expect = 0.0 Identities = 583/585 (99%) Strand = Plus / Minus Query: 2 aagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 61 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84443 aagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 84384 Query: 62 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84383 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 84324 Query: 122 gtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctg 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84323 gtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctg 84264 Query: 182 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84263 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 84204 Query: 242 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84203 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 84144 Query: 302 gcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 361 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84143 gcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 84084 Query: 362 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84083 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 84024 Query: 422 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84023 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 83964 Query: 482 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83963 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 83904 Query: 542 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 586 ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83903 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 83859
>emb|X15901.1|CHOSXX Oryza sativa (japonica cultivar-group) chloroplast genome Length = 134525 Score = 1144 bits (577), Expect = 0.0 Identities = 583/585 (99%) Strand = Plus / Minus Query: 2 aagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 61 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119550 aagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 119491 Query: 62 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119490 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 119431 Query: 122 gtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctg 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119430 gtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctg 119371 Query: 182 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119370 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 119311 Query: 242 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119310 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 119251 Query: 302 gcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 361 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119250 gcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 119191 Query: 362 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119190 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 119131 Query: 422 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119130 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 119071 Query: 482 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119070 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 119011 Query: 542 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 586 ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119010 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 118966 Score = 1144 bits (577), Expect = 0.0 Identities = 583/585 (99%) Strand = Plus / Plus Query: 2 aagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 61 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95568 aagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 95627 Query: 62 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95628 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 95687 Query: 122 gtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctg 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95688 gtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctg 95747 Query: 182 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95748 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 95807 Query: 242 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95808 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 95867 Query: 302 gcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 361 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95868 gcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 95927 Query: 362 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95928 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 95987 Query: 422 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95988 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 96047 Query: 482 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96048 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 96107 Query: 542 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 586 ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96108 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 96152
>gb|AC092750.2| Oryza sativa (japonica cultivar-group) cultivar Nipponbare from chromosome 10, complete sequence Length = 134933 Score = 1144 bits (577), Expect = 0.0 Identities = 583/585 (99%) Strand = Plus / Minus Query: 2 aagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 61 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58269 aagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 58210 Query: 62 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58209 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 58150 Query: 122 gtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctg 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58149 gtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctg 58090 Query: 182 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58089 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 58030 Query: 242 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58029 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 57970 Query: 302 gcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 361 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57969 gcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 57910 Query: 362 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57909 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 57850 Query: 422 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57849 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 57790 Query: 482 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57789 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 57730 Query: 542 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 586 ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57729 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 57685
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 1144 bits (577), Expect = 0.0 Identities = 583/585 (99%) Strand = Plus / Plus Query: 2 aagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 61 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268502 aagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 9268561 Query: 62 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268562 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 9268621 Query: 122 gtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctg 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268622 gtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctg 9268681 Query: 182 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268682 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 9268741 Query: 242 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268742 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 9268801 Query: 302 gcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 361 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268802 gcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 9268861 Query: 362 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268862 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 9268921 Query: 422 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268922 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 9268981 Query: 482 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268982 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 9269041 Query: 542 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 586 ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9269042 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 9269086 Score = 1136 bits (573), Expect = 0.0 Identities = 582/585 (99%) Strand = Plus / Plus Query: 2 aagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 61 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228002 aagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 9228061 Query: 62 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228062 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 9228121 Query: 122 gtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctg 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228122 gtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctg 9228181 Query: 182 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228182 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 9228241 Query: 242 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228242 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 9228301 Query: 302 gcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 361 ||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 9228302 gcgagtcttcatagggcgattgtcactgcttatggacccgaacctaggtgatctatccat 9228361 Query: 362 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228362 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 9228421 Query: 422 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228422 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 9228481 Query: 482 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228482 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 9228541 Query: 542 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 586 ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228542 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 9228586 Score = 1136 bits (573), Expect = 0.0 Identities = 582/585 (99%) Strand = Plus / Plus Query: 2 aagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 61 |||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 9056416 aagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcctgtgtgaa 9056475 Query: 62 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056476 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 9056535 Query: 122 gtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctg 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056536 gtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctg 9056595 Query: 182 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056596 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 9056655 Query: 242 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056656 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 9056715 Query: 302 gcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 361 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056716 gcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 9056775 Query: 362 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056776 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 9056835 Query: 422 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056836 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 9056895 Query: 482 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056896 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 9056955 Query: 542 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 586 ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056956 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 9057000 Score = 1120 bits (565), Expect = 0.0 Identities = 581/585 (99%), Gaps = 1/585 (0%) Strand = Plus / Plus Query: 2 aagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 61 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164591 aagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 9164650 Query: 62 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164651 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 9164710 Query: 122 gtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctg 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164711 gtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctg 9164770 Query: 182 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164771 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 9164830 Query: 242 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164831 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 9164890 Query: 302 gcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 361 ||||||||| |||||||||||||||||||||||||||||||| || |||||||||||||| Sbjct: 9164891 gcgagtcttcatagggcgattgtcactgcttatggacccgaa-ctaggtgatctatccat 9164949 Query: 362 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164950 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 9165009 Query: 422 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165010 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 9165069 Query: 482 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165070 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 9165129 Query: 542 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 586 ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165130 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 9165174 Score = 165 bits (83), Expect = 2e-37 Identities = 101/107 (94%) Strand = Plus / Minus Query: 98 ggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagt 157 |||||| |||||||||||||| || |||||||||||| |||||||||||||||||||||| Sbjct: 25171513 ggtgactgatagcgaagtagtgccatgagggaaaggtaaaaagaacccccagtgggtagt 25171454 Query: 158 gaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 204 |||||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 25171453 gaaatagaacatgaaaccgtgctgagctcccaagcagtggtagggga 25171407
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 1144 bits (577), Expect = 0.0 Identities = 583/585 (99%) Strand = Plus / Plus Query: 2 aagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 61 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938487 aagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 19938546 Query: 62 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938547 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 19938606 Query: 122 gtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctg 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938607 gtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctg 19938666 Query: 182 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938667 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 19938726 Query: 242 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938727 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 19938786 Query: 302 gcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 361 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938787 gcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 19938846 Query: 362 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938847 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 19938906 Query: 422 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938907 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 19938966 Query: 482 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938967 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 19939026 Query: 542 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 586 ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19939027 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 19939071 Score = 1144 bits (577), Expect = 0.0 Identities = 583/585 (99%) Strand = Plus / Minus Query: 2 aagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 61 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276944 aagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 10276885 Query: 62 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276884 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 10276825 Query: 122 gtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctg 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276824 gtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctg 10276765 Query: 182 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276764 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 10276705 Query: 242 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276704 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 10276645 Query: 302 gcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 361 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276644 gcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 10276585 Query: 362 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276584 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 10276525 Query: 422 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276524 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 10276465 Query: 482 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276464 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 10276405 Query: 542 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 586 ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276404 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 10276360 Score = 1136 bits (573), Expect = 0.0 Identities = 582/585 (99%) Strand = Plus / Plus Query: 2 aagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 61 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387354 aagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 10387413 Query: 62 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387414 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 10387473 Query: 122 gtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctg 181 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387474 gtgagggaaaggtgagaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctg 10387533 Query: 182 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387534 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 10387593 Query: 242 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387594 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 10387653 Query: 302 gcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 361 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387654 gcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 10387713 Query: 362 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387714 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 10387773 Query: 422 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387774 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 10387833 Query: 482 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387834 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 10387893 Query: 542 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 586 ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387894 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 10387938 Score = 61.9 bits (31), Expect = 2e-06 Identities = 31/31 (100%) Strand = Plus / Minus Query: 116 agtaccgtgagggaaaggtgaaaagaacccc 146 ||||||||||||||||||||||||||||||| Sbjct: 2736641 agtaccgtgagggaaaggtgaaaagaacccc 2736611
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 1144 bits (577), Expect = 0.0 Identities = 583/585 (99%) Strand = Plus / Plus Query: 2 aagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 61 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598669 aagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 31598728 Query: 62 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598729 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 31598788 Query: 122 gtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctg 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598789 gtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctg 31598848 Query: 182 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598849 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 31598908 Query: 242 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598909 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 31598968 Query: 302 gcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 361 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598969 gcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 31599028 Query: 362 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599029 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 31599088 Query: 422 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599089 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 31599148 Query: 482 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599149 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 31599208 Query: 542 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 586 ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599209 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 31599253 Score = 44.1 bits (22), Expect = 0.51 Identities = 31/34 (91%) Strand = Plus / Plus Query: 552 gcgagcggtaccaaatcgaggcaaactctgaata 585 |||| ||||||||||||||| |||||| |||||| Sbjct: 36035516 gcgaacggtaccaaatcgagacaaactttgaata 36035549
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 1144 bits (577), Expect = 0.0 Identities = 583/585 (99%) Strand = Plus / Plus Query: 2 aagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 61 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33525985 aagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 33526044 Query: 62 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526045 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 33526104 Query: 122 gtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctg 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526105 gtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctg 33526164 Query: 182 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526165 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 33526224 Query: 242 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526225 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 33526284 Query: 302 gcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 361 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526285 gcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 33526344 Query: 362 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526345 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 33526404 Query: 422 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526405 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 33526464 Query: 482 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526465 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 33526524 Query: 542 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 586 ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526525 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 33526569 Score = 333 bits (168), Expect = 4e-88 Identities = 174/176 (98%) Strand = Plus / Minus Query: 120 ccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgc 179 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 16678101 ccgtgagggaaaggtgaaaagaacccccagtgggtaatgaaatagaacgtgaaaccgtgc 16678042 Query: 180 tgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatga 239 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 16678041 tgagctcccaaccagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatga 16677982 Query: 240 gccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgta 295 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 16677981 gccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgta 16677926 Score = 194 bits (98), Expect = 2e-46 Identities = 107/110 (97%) Strand = Plus / Minus Query: 134 tgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagca 193 ||||||||||||| || |||||||||||||||||||||||| |||||||||||||||||| Sbjct: 32744772 tgaaaagaacccctagggggtagtgaaatagaacgtgaaacagtgctgagctcccaagca 32744713 Query: 194 gtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccg 243 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 32744712 gtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccg 32744663 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 100 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 146 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 33538588 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 33538634 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 100 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 146 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 33499956 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 33500002 Score = 61.9 bits (31), Expect = 2e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 127 ggaaaggtgaaaagaacccccagtgggtagtgaaataga 165 |||||||||||||||||||| ||| |||||||||||||| Sbjct: 37705382 ggaaaggtgaaaagaacccctagtaggtagtgaaataga 37705420
>gb|AC074232.11| Oryza sativa chromosome 10 BAC OSJNBb0005J14 genomic sequence, complete sequence Length = 116932 Score = 1144 bits (577), Expect = 0.0 Identities = 583/585 (99%) Strand = Plus / Minus Query: 2 aagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 61 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47556 aagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 47497 Query: 62 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47496 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 47437 Query: 122 gtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctg 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47436 gtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctg 47377 Query: 182 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47376 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 47317 Query: 242 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47316 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 47257 Query: 302 gcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 361 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47256 gcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 47197 Query: 362 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47196 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 47137 Query: 422 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47136 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 47077 Query: 482 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47076 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 47017 Query: 542 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 586 ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47016 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 46972
>dbj|AP003280.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0557A01 Length = 147201 Score = 1144 bits (577), Expect = 0.0 Identities = 583/585 (99%) Strand = Plus / Plus Query: 2 aagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 61 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71182 aagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 71241 Query: 62 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71242 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 71301 Query: 122 gtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctg 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71302 gtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctg 71361 Query: 182 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71362 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 71421 Query: 242 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71422 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 71481 Query: 302 gcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 361 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71482 gcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 71541 Query: 362 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71542 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 71601 Query: 422 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71602 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 71661 Query: 482 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71662 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 71721 Query: 542 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 586 ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71722 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 71766 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 100 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 146 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 83785 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 83831 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 100 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 146 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 45153 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 45199
>dbj|AK119504.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-134-E12, full insert sequence Length = 1517 Score = 1144 bits (577), Expect = 0.0 Identities = 583/585 (99%) Strand = Plus / Plus Query: 2 aagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 61 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 146 aagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 205 Query: 62 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 206 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 265 Query: 122 gtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctg 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 266 gtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctg 325 Query: 182 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 326 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 385 Query: 242 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 386 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 445 Query: 302 gcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 361 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 446 gcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 505 Query: 362 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 506 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 565 Query: 422 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 566 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 625 Query: 482 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 626 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 685 Query: 542 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 586 ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 686 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 730
>dbj|AK106979.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-119-H06, full insert sequence Length = 1684 Score = 1144 bits (577), Expect = 0.0 Identities = 583/585 (99%) Strand = Plus / Plus Query: 2 aagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 61 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 354 aagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 413 Query: 62 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 414 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 473 Query: 122 gtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctg 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 474 gtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctg 533 Query: 182 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 534 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 593 Query: 242 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 594 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 653 Query: 302 gcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 361 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 654 gcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 713 Query: 362 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 714 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 773 Query: 422 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 774 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 833 Query: 482 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 834 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 893 Query: 542 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 586 ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 894 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 938
>dbj|AK105744.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-B04, full insert sequence Length = 2390 Score = 1144 bits (577), Expect = 0.0 Identities = 583/585 (99%) Strand = Plus / Plus Query: 2 aagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 61 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 149 aagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 208 Query: 62 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 209 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 268 Query: 122 gtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctg 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 269 gtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctg 328 Query: 182 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 329 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 388 Query: 242 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 389 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 448 Query: 302 gcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 361 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 449 gcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 508 Query: 362 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 509 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 568 Query: 422 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 569 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 628 Query: 482 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 629 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 688 Query: 542 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 586 ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 689 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 733
>dbj|AK104167.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-212-D12, full insert sequence Length = 1223 Score = 1144 bits (577), Expect = 0.0 Identities = 583/585 (99%) Strand = Plus / Plus Query: 2 aagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 61 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 261 aagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 320 Query: 62 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 321 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 380 Query: 122 gtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctg 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 381 gtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctg 440 Query: 182 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 441 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 500 Query: 242 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 501 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 560 Query: 302 gcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 361 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 561 gcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 620 Query: 362 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 621 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 680 Query: 422 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 681 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 740 Query: 482 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 741 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 800 Query: 542 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 586 ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 801 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 845
>dbj|AK063769.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-121-B10, full insert sequence Length = 2589 Score = 1144 bits (577), Expect = 0.0 Identities = 583/585 (99%) Strand = Plus / Plus Query: 2 aagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 61 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20 aagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 79 Query: 62 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 80 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 139 Query: 122 gtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctg 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 140 gtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctg 199 Query: 182 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 200 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 259 Query: 242 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 260 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 319 Query: 302 gcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 361 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 320 gcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 379 Query: 362 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 380 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 439 Query: 422 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 440 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 499 Query: 482 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 500 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 559 Query: 542 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 586 ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 560 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 604
>dbj|AK060454.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-011-G07, full insert sequence Length = 1109 Score = 1144 bits (577), Expect = 0.0 Identities = 583/585 (99%) Strand = Plus / Plus Query: 2 aagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 61 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 151 aagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 210 Query: 62 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 211 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 270 Query: 122 gtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctg 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 271 gtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctg 330 Query: 182 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 331 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 390 Query: 242 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 391 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 450 Query: 302 gcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 361 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 451 gcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 510 Query: 362 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 511 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 570 Query: 422 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 571 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 630 Query: 482 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 631 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 690 Query: 542 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 586 ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 691 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 735
>dbj|AK059208.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-B06, full insert sequence Length = 1896 Score = 1144 bits (577), Expect = 0.0 Identities = 583/585 (99%) Strand = Plus / Plus Query: 2 aagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 61 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 149 aagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 208 Query: 62 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 209 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 268 Query: 122 gtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctg 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 269 gtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctg 328 Query: 182 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 329 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 388 Query: 242 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 389 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 448 Query: 302 gcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 361 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 449 gcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 508 Query: 362 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 509 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 568 Query: 422 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 569 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 628 Query: 482 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 629 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 688 Query: 542 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 586 ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 689 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 733
>dbj|AK059024.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-021-B07, full insert sequence Length = 1462 Score = 1144 bits (577), Expect = 0.0 Identities = 583/585 (99%) Strand = Plus / Plus Query: 2 aagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 61 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 151 aagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 210 Query: 62 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 211 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 270 Query: 122 gtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctg 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 271 gtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctg 330 Query: 182 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 331 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 390 Query: 242 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 391 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 450 Query: 302 gcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 361 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 451 gcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 510 Query: 362 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 511 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 570 Query: 422 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 571 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 630 Query: 482 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 631 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 690 Query: 542 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 586 ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 691 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 735
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 1144 bits (577), Expect = 0.0 Identities = 583/585 (99%) Strand = Plus / Plus Query: 2 aagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 61 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949763 aagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 19949822 Query: 62 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949823 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 19949882 Query: 122 gtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctg 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949883 gtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctg 19949942 Query: 182 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949943 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 19950002 Query: 242 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950003 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 19950062 Query: 302 gcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 361 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950063 gcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 19950122 Query: 362 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950123 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 19950182 Query: 422 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950183 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 19950242 Query: 482 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950243 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 19950302 Query: 542 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 586 ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950303 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 19950347 Score = 1144 bits (577), Expect = 0.0 Identities = 583/585 (99%) Strand = Plus / Minus Query: 2 aagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 61 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282983 aagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 10282924 Query: 62 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282923 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 10282864 Query: 122 gtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctg 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282863 gtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctg 10282804 Query: 182 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282803 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 10282744 Query: 242 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282743 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 10282684 Query: 302 gcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 361 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282683 gcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 10282624 Query: 362 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282623 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 10282564 Query: 422 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282563 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 10282504 Query: 482 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282503 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 10282444 Query: 542 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 586 ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282443 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 10282399 Score = 1136 bits (573), Expect = 0.0 Identities = 582/585 (99%) Strand = Plus / Plus Query: 2 aagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 61 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393393 aagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 10393452 Query: 62 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393453 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 10393512 Query: 122 gtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctg 181 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393513 gtgagggaaaggtgagaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctg 10393572 Query: 182 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393573 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 10393632 Query: 242 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393633 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 10393692 Query: 302 gcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 361 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393693 gcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 10393752 Query: 362 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393753 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 10393812 Query: 422 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393813 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 10393872 Query: 482 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393873 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 10393932 Query: 542 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 586 ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393933 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 10393977 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Minus Query: 100 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 146 ||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 2736608 tgaccgatagcatacaagtaccgtgagggaaaggtgaaaagaacccc 2736562
>dbj|AP006728.1| Oryza nivara chloroplast DNA, complete genome Length = 134494 Score = 1144 bits (577), Expect = 0.0 Identities = 583/585 (99%) Strand = Plus / Minus Query: 2 aagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 61 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119524 aagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 119465 Query: 62 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119464 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 119405 Query: 122 gtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctg 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119404 gtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctg 119345 Query: 182 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119344 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 119285 Query: 242 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119284 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 119225 Query: 302 gcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 361 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119224 gcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 119165 Query: 362 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119164 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 119105 Query: 422 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119104 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 119045 Query: 482 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119044 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 118985 Query: 542 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 586 ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118984 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 118940 Score = 1144 bits (577), Expect = 0.0 Identities = 583/585 (99%) Strand = Plus / Plus Query: 2 aagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 61 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95515 aagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 95574 Query: 62 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95575 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 95634 Query: 122 gtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctg 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95635 gtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctg 95694 Query: 182 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95695 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 95754 Query: 242 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95755 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 95814 Query: 302 gcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 361 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95815 gcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 95874 Query: 362 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95875 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 95934 Query: 422 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95935 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 95994 Query: 482 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95995 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 96054 Query: 542 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 586 ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96055 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 96099
>gb|DQ490949.1| Festuca arundinacea 23S ribosomal RNA gene, partial sequence; chloroplast Length = 982 Score = 1136 bits (573), Expect = 0.0 Identities = 582/585 (99%) Strand = Plus / Minus Query: 2 aagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 61 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 627 aagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 568 Query: 62 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 567 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 508 Query: 122 gtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctg 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 507 gtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctg 448 Query: 182 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 447 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 388 Query: 242 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 301 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 387 cggcgactcataggcagtggcttggttaagggaatggaacccaccggagccgtagcgaaa 328 Query: 302 gcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 361 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 327 gcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 268 Query: 362 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 267 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 208 Query: 422 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 207 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 148 Query: 482 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 147 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 88 Query: 542 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 586 ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 87 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 43
>emb|BX569685.1|OSJN00291 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0061C08, complete sequence Length = 145980 Score = 1136 bits (573), Expect = 0.0 Identities = 582/585 (99%) Strand = Plus / Plus Query: 2 aagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 61 |||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 14342 aagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcctgtgtgaa 14401 Query: 62 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14402 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 14461 Query: 122 gtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctg 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14462 gtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctg 14521 Query: 182 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14522 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 14581 Query: 242 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14582 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 14641 Query: 302 gcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 361 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14642 gcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 14701 Query: 362 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14702 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 14761 Query: 422 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14762 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 14821 Query: 482 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14822 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 14881 Query: 542 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 586 ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14882 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 14926 Score = 1120 bits (565), Expect = 0.0 Identities = 581/585 (99%), Gaps = 1/585 (0%) Strand = Plus / Plus Query: 2 aagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 61 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122617 aagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 122676 Query: 62 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122677 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 122736 Query: 122 gtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctg 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122737 gtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctg 122796 Query: 182 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122797 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 122856 Query: 242 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122857 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 122916 Query: 302 gcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 361 ||||||||| |||||||||||||||||||||||||||||||| || |||||||||||||| Sbjct: 122917 gcgagtcttcatagggcgattgtcactgcttatggacccgaa-ctaggtgatctatccat 122975 Query: 362 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122976 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 123035 Query: 422 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123036 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 123095 Query: 482 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123096 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 123155 Query: 542 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 586 ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123156 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 123200
>emb|AL731605.3|OSJN00246 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0042F21, complete sequence Length = 167113 Score = 1136 bits (573), Expect = 0.0 Identities = 582/585 (99%) Strand = Plus / Plus Query: 2 aagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 61 |||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 141150 aagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcctgtgtgaa 141209 Query: 62 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141210 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 141269 Query: 122 gtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctg 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141270 gtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctg 141329 Query: 182 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141330 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 141389 Query: 242 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141390 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 141449 Query: 302 gcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 361 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141450 gcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 141509 Query: 362 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141510 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 141569 Query: 422 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141570 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 141629 Query: 482 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141630 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 141689 Query: 542 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 586 ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141690 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 141734
>gb|AC122148.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0075K12, complete sequence Length = 125936 Score = 1136 bits (573), Expect = 0.0 Identities = 582/585 (99%) Strand = Plus / Plus Query: 2 aagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 61 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93746 aagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 93805 Query: 62 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93806 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 93865 Query: 122 gtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctg 181 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93866 gtgagggaaaggtgagaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctg 93925 Query: 182 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93926 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 93985 Query: 242 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93986 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 94045 Query: 302 gcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 361 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94046 gcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 94105 Query: 362 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94106 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 94165 Query: 422 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94166 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 94225 Query: 482 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94226 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 94285 Query: 542 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 586 ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94286 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 94330
>gb|AE009947.2| Saccharum hybrid cultivar SP-80-3280 chloroplast, complete genome Length = 141182 Score = 1136 bits (573), Expect = 0.0 Identities = 582/585 (99%) Strand = Plus / Plus Query: 2 aagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 61 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20577 aagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 20636 Query: 62 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20637 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 20696 Query: 122 gtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctg 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20697 gtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctg 20756 Query: 182 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20757 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 20816 Query: 242 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 301 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 20817 cggcgactcataggcagtggcttggttaagggaatggaacccaccggagccgtagcgaaa 20876 Query: 302 gcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 361 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20877 gcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 20936 Query: 362 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20937 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 20996 Query: 422 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20997 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 21056 Query: 482 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21057 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 21116 Query: 542 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 586 ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21117 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 21161 Score = 1098 bits (554), Expect = 0.0 Identities = 579/586 (98%), Gaps = 1/586 (0%) Strand = Plus / Minus Query: 2 aagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 61 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44541 aagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 44482 Query: 62 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44481 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 44422 Query: 122 gtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctg 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44421 gtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctg 44362 Query: 182 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44361 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 44302 Query: 242 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 301 |||||||||||||||||||||||||||||||||| ||||||| |||||||||||| |||| Sbjct: 44301 cggcgactcataggcagtggcttggttaagggaatggaaccctccggagccgtagtgaaa 44242 Query: 302 gcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 361 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44241 gcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 44182 Query: 362 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44181 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 44122 Query: 422 cagcggatgagttgtggttaggggtg-aaatgccactcgaacccagagctagctggttct 480 |||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||| Sbjct: 44121 cagcggatgagttgtggttaggggtgtaaatgccactcgaacccagagctagttggttct 44062 Query: 481 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44061 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 44002 Query: 541 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 586 |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44001 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 43956
>gb|AY082604.1| Saccharum hybrid cultivar 23S ribosomal RNA gene, partial sequence; tRNA-Ala (trnA) gene, complete sequence; hypothetical protein gene, complete cds; ACR pseudogene, complete sequence; tRNA-Ile (trnI) gene, partial sequence; and ORF72 pseudogene, partial sequence; chloroplast genes for chloroplast products Length = 3026 Score = 1136 bits (573), Expect = 0.0 Identities = 582/585 (99%) Strand = Plus / Minus Query: 2 aagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 61 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1170 aagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 1111 Query: 62 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1110 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 1051 Query: 122 gtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctg 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1050 gtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctg 991 Query: 182 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 990 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 931 Query: 242 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 301 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 930 cggcgactcataggcagtggcttggttaagggaatggaacccaccggagccgtagcgaaa 871 Query: 302 gcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 361 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 870 gcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 811 Query: 362 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 810 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 751 Query: 422 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 750 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 691 Query: 482 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 690 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 631 Query: 542 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 586 ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 630 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 586
>gb|AC099402.2| Oryza sativa chromosome 10 clone OSJNBa0022D10, complete sequence Length = 144459 Score = 1136 bits (573), Expect = 0.0 Identities = 582/585 (99%) Strand = Plus / Plus Query: 2 aagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 61 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27810 aagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 27869 Query: 62 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27870 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 27929 Query: 122 gtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctg 181 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27930 gtgagggaaaggtgagaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctg 27989 Query: 182 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27990 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 28049 Query: 242 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28050 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 28109 Query: 302 gcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 361 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28110 gcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 28169 Query: 362 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28170 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 28229 Query: 422 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28230 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 28289 Query: 482 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28290 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 28349 Query: 542 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 586 ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28350 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 28394
>gb|AY928077.1| Zea mays cultivar B73 chloroplast, complete genome Length = 140454 Score = 1136 bits (573), Expect = 0.0 Identities = 582/585 (99%) Strand = Plus / Minus Query: 2 aagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 61 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123380 aagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 123321 Query: 62 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123320 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 123261 Query: 122 gtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctg 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123260 gtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctg 123201 Query: 182 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123200 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 123141 Query: 242 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 301 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 123140 cggcgactcataggcagtggcttggttaagggaatggaacccaccggagccgtagcgaaa 123081 Query: 302 gcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 361 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123080 gcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 123021 Query: 362 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123020 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 122961 Query: 422 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122960 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 122901 Query: 482 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122900 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 122841 Query: 542 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 586 ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122840 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 122796 Score = 1136 bits (573), Expect = 0.0 Identities = 582/585 (99%) Strand = Plus / Plus Query: 2 aagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 61 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99457 aagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 99516 Query: 62 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99517 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 99576 Query: 122 gtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctg 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99577 gtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctg 99636 Query: 182 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99637 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 99696 Query: 242 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 301 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 99697 cggcgactcataggcagtggcttggttaagggaatggaacccaccggagccgtagcgaaa 99756 Query: 302 gcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 361 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99757 gcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 99816 Query: 362 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99817 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 99876 Query: 422 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99877 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 99936 Query: 482 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99937 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 99996 Query: 542 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 586 ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99997 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 100041
>dbj|AK060845.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-D12, full insert sequence Length = 1463 Score = 1136 bits (573), Expect = 0.0 Identities = 582/585 (99%) Strand = Plus / Plus Query: 2 aagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 61 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 148 aagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 207 Query: 62 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 208 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 267 Query: 122 gtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctg 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 268 gtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctg 327 Query: 182 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 328 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 387 Query: 242 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 388 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 447 Query: 302 gcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 361 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 448 gcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 507 Query: 362 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 421 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 508 gaccaggatgaagcttggatgaaaccaagcagaggtccgaaccgactgatgttgaagaat 567 Query: 422 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 568 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 627 Query: 482 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 628 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 687 Query: 542 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 586 ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 688 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 732
>dbj|AP006714.1| Saccharum officinarum chloroplast DNA, complete genome Length = 141182 Score = 1136 bits (573), Expect = 0.0 Identities = 582/585 (99%) Strand = Plus / Minus Query: 2 aagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 61 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124097 aagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 124038 Query: 62 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124037 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 123978 Query: 122 gtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctg 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123977 gtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctg 123918 Query: 182 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123917 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 123858 Query: 242 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 301 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 123857 cggcgactcataggcagtggcttggttaagggaatggaacccaccggagccgtagcgaaa 123798 Query: 302 gcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 361 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123797 gcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 123738 Query: 362 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123737 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 123678 Query: 422 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123677 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 123618 Query: 482 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123617 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 123558 Query: 542 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 586 ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123557 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 123513 Score = 1136 bits (573), Expect = 0.0 Identities = 582/585 (99%) Strand = Plus / Plus Query: 2 aagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 61 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100134 aagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 100193 Query: 62 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100194 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 100253 Query: 122 gtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctg 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100254 gtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctg 100313 Query: 182 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100314 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 100373 Query: 242 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 301 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 100374 cggcgactcataggcagtggcttggttaagggaatggaacccaccggagccgtagcgaaa 100433 Query: 302 gcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 361 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100434 gcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 100493 Query: 362 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100494 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 100553 Query: 422 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100554 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 100613 Query: 482 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100614 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 100673 Query: 542 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 586 ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100674 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 100718
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 1128 bits (569), Expect = 0.0 Identities = 581/585 (99%) Strand = Plus / Minus Query: 2 aagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 61 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241779 aagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 9241720 Query: 62 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241719 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 9241660 Query: 122 gtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctg 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241659 gtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctg 9241600 Query: 182 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241599 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 9241540 Query: 242 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 301 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241539 tggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 9241480 Query: 302 gcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 361 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241479 gcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 9241420 Query: 362 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 421 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 9241419 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgtctgatgttgaagaat 9241360 Query: 422 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241359 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 9241300 Query: 482 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241299 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 9241240 Query: 542 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 586 ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241239 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 9241195 Score = 77.8 bits (39), Expect = 4e-11 Identities = 57/63 (90%) Strand = Plus / Minus Query: 524 ggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaa 583 |||||||||| |||| |||||||| ||| ||||||| ||||||||||| ||||||||||| Sbjct: 3580549 ggtaaagcaccgtttaggtgcgggttgcacgagcggcaccaaatcgagacaaactctgaa 3580490 Query: 584 tac 586 ||| Sbjct: 3580489 tac 3580487
>dbj|AP005161.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0036E18 Length = 141148 Score = 1128 bits (569), Expect = 0.0 Identities = 581/585 (99%) Strand = Plus / Minus Query: 2 aagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 61 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52992 aagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 52933 Query: 62 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52932 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 52873 Query: 122 gtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctg 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52872 gtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctg 52813 Query: 182 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52812 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 52753 Query: 242 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 301 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52752 tggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 52693 Query: 302 gcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 361 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52692 gcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 52633 Query: 362 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 421 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 52632 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgtctgatgttgaagaat 52573 Query: 422 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52572 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 52513 Query: 482 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52512 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 52453 Query: 542 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 586 ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52452 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 52408
>emb|X86563.2|ZMA86563 Zea mays complete chloroplast genome Length = 140384 Score = 1102 bits (556), Expect = 0.0 Identities = 579/584 (99%), Gaps = 2/584 (0%) Strand = Plus / Minus Query: 3 agcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaat 62 ||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123318 agcatcact-gcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaat 123260 Query: 63 cagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccg 122 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123259 cagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccg 123200 Query: 123 tgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctga 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123199 tgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctga 123140 Query: 183 gctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagcc 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123139 gctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagcc 123080 Query: 243 ggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaag 302 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 123079 ggcgactcataggcagtggcttggttaagggaatggaacccaccggagccgtagcgaaag 123020 Query: 303 cgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatg 362 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123019 cgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatg 122960 Query: 363 accaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 422 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122959 accaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 122900 Query: 423 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 482 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122899 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 122840 Query: 483 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 542 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122839 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 122780 Query: 543 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 586 || ||||||||||||||||||||||||||||||||||||||||| Sbjct: 122779 gc-ggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 122737 Score = 1102 bits (556), Expect = 0.0 Identities = 579/584 (99%), Gaps = 2/584 (0%) Strand = Plus / Plus Query: 3 agcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaat 62 ||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99419 agcatcact-gcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaat 99477 Query: 63 cagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccg 122 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99478 cagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccg 99537 Query: 123 tgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctga 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99538 tgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctga 99597 Query: 183 gctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagcc 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99598 gctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagcc 99657 Query: 243 ggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaag 302 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 99658 ggcgactcataggcagtggcttggttaagggaatggaacccaccggagccgtagcgaaag 99717 Query: 303 cgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatg 362 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99718 cgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatg 99777 Query: 363 accaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 422 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99778 accaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 99837 Query: 423 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 482 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99838 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 99897 Query: 483 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 542 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99898 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 99957 Query: 543 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 586 || ||||||||||||||||||||||||||||||||||||||||| Sbjct: 99958 gc-ggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 100000
>emb|Z00028.1|CHZMRRNA Zea mays chloroplast rRNA-operon Length = 8862 Score = 1102 bits (556), Expect = 0.0 Identities = 579/584 (99%), Gaps = 2/584 (0%) Strand = Plus / Plus Query: 3 agcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaat 62 ||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5772 agcatcact-gcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaat 5830 Query: 63 cagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccg 122 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5831 cagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccg 5890 Query: 123 tgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctga 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5891 tgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctga 5950 Query: 183 gctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagcc 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5951 gctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagcc 6010 Query: 243 ggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaag 302 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 6011 ggcgactcataggcagtggcttggttaagggaatggaacccaccggagccgtagcgaaag 6070 Query: 303 cgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatg 362 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6071 cgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatg 6130 Query: 363 accaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 422 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6131 accaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 6190 Query: 423 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 482 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6191 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 6250 Query: 483 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 542 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6251 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 6310 Query: 543 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 586 || ||||||||||||||||||||||||||||||||||||||||| Sbjct: 6311 gc-ggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 6353
>emb|X01365.1|CHZM23S Maize chloroplast DNA for 4.5S and 23S ribosomal RNA Length = 3079 Score = 1102 bits (556), Expect = 0.0 Identities = 579/584 (99%), Gaps = 2/584 (0%) Strand = Plus / Plus Query: 3 agcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaat 62 ||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 360 agcatcact-gcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaat 418 Query: 63 cagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccg 122 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 419 cagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccg 478 Query: 123 tgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctga 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 479 tgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctga 538 Query: 183 gctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagcc 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 539 gctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagcc 598 Query: 243 ggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaag 302 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 599 ggcgactcataggcagtggcttggttaagggaatggaacccaccggagccgtagcgaaag 658 Query: 303 cgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatg 362 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 659 cgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatg 718 Query: 363 accaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 422 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 719 accaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 778 Query: 423 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 482 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 779 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 838 Query: 483 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 542 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 839 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 898 Query: 543 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 586 || ||||||||||||||||||||||||||||||||||||||||| Sbjct: 899 gc-ggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 941
>dbj|AK059219.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-C12, full insert sequence Length = 1634 Score = 1082 bits (546), Expect = 0.0 Identities = 552/554 (99%) Strand = Plus / Plus Query: 33 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 92 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 60 Query: 93 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgg 152 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgg 120 Query: 153 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatc 212 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 gtagtgaaataggacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatc 180 Query: 213 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 272 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 240 Query: 273 gaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgctt 332 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 241 gaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgctt 300 Query: 333 atggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagca 392 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 atggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagca 360 Query: 393 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 452 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 420 Query: 453 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact 512 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 421 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact 480 Query: 513 ggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgagg 572 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 481 ggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgagg 540 Query: 573 caaactctgaatac 586 |||||||||||||| Sbjct: 541 caaactctgaatac 554
>dbj|AK107087.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-121-G07, full insert sequence Length = 1935 Score = 1059 bits (534), Expect = 0.0 Identities = 537/538 (99%) Strand = Plus / Plus Query: 49 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 108 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 60 Query: 109 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 168 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 120 Query: 169 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 228 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 180 Query: 229 ttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgg 288 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 ttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgg 240 Query: 289 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgg 348 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 241 agccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgg 300 Query: 349 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 408 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 360 Query: 409 gatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagag 468 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 gatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagag 420 Query: 469 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 528 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 421 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 480 Query: 529 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 586 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 481 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 538
>gb|AC136521.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone OSJNBa0034M22, complete sequence Length = 149435 Score = 1027 bits (518), Expect = 0.0 Identities = 539/545 (98%), Gaps = 2/545 (0%) Strand = Plus / Minus Query: 44 cgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgac 103 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122820 cgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgac 122761 Query: 104 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 163 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122760 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 122701 Query: 164 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 223 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122700 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 122641 Query: 224 gcctgttgaagaatgagccggcgactcataggcagtg--gcttggttaagggaacggaac 281 ||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||| Sbjct: 122640 gcctgttgaagaatgagccggtgactcataggcagtgtggcttggttaagggaacggaac 122581 Query: 282 ccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccg 341 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 122580 ccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccg 122521 Query: 342 aacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccga 401 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 122520 aacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggttcga 122461 Query: 402 accgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaa 461 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122460 accgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaa 122401 Query: 462 cccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatcta 521 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122400 cccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatcta 122341 Query: 522 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 581 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 122340 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaattgaggcaaactctg 122281 Query: 582 aatac 586 ||||| Sbjct: 122280 aatac 122276 Score = 85.7 bits (43), Expect = 1e-13 Identities = 49/51 (96%) Strand = Plus / Minus Query: 2 aagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatc 52 |||||||||||||||| |||||| ||||||||||||||||||||||||||| Sbjct: 123114 aagcatcactagcttacgctctgccccgagtagcatggggcacgtggaatc 123064
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 1027 bits (518), Expect = 0.0 Identities = 539/545 (98%), Gaps = 2/545 (0%) Strand = Plus / Minus Query: 44 cgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgac 103 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825361 cgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgac 12825302 Query: 104 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 163 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825301 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 12825242 Query: 164 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 223 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825241 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 12825182 Query: 224 gcctgttgaagaatgagccggcgactcataggcagtg--gcttggttaagggaacggaac 281 ||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||| Sbjct: 12825181 gcctgttgaagaatgagccggtgactcataggcagtgtggcttggttaagggaacggaac 12825122 Query: 282 ccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccg 341 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 12825121 ccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccg 12825062 Query: 342 aacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccga 401 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 12825061 aacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggttcga 12825002 Query: 402 accgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaa 461 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825001 accgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaa 12824942 Query: 462 cccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatcta 521 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12824941 cccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatcta 12824882 Query: 522 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 581 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 12824881 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaattgaggcaaactctg 12824822 Query: 582 aatac 586 ||||| Sbjct: 12824821 aatac 12824817 Score = 85.7 bits (43), Expect = 1e-13 Identities = 49/51 (96%) Strand = Plus / Minus Query: 2 aagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatc 52 |||||||||||||||| |||||| ||||||||||||||||||||||||||| Sbjct: 12825655 aagcatcactagcttacgctctgccccgagtagcatggggcacgtggaatc 12825605 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Plus Query: 2 aagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 48 |||||||||||||||||||||||| || |||||||||| ||| |||| Sbjct: 16021796 aagcatcactagcttatgctctgaaccaagtagcatggcgcatgtgg 16021842
>emb|AJ879453.1| Acorus calamus chloroplast, complete genome Length = 153821 Score = 973 bits (491), Expect = 0.0 Identities = 562/585 (96%), Gaps = 8/585 (1%) Strand = Plus / Minus Query: 2 aagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 61 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133868 aagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 133809 Query: 62 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133808 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 133749 Query: 122 gtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctg 181 ||||||||||||||||||||||||||| ||| ||||||||||||| ||||||||| Sbjct: 133748 gtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccgta--- 133692 Query: 182 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 241 |||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||| Sbjct: 133691 agctcccaagcagtgggaggagaatgtgatctctgaccgcgtgcctgttgaagaatgagc 133632 Query: 242 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 301 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 133631 cggcgactcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaa 133577 Query: 302 gcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 361 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133576 gcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 133517 Query: 362 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 421 |||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||| Sbjct: 133516 gaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaat 133457 Query: 422 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133456 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 133397 Query: 482 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 541 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 133396 cccgaaatgcgttgaggcgcagcagttgactagacatctaggggtaaagcactgtttcgg 133337 Query: 542 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 586 ||||||| ||| ||||||||||||||||||||||||||||||||| Sbjct: 133336 tgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatac 133292 Score = 973 bits (491), Expect = 0.0 Identities = 562/585 (96%), Gaps = 8/585 (1%) Strand = Plus / Plus Query: 2 aagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 61 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104103 aagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 104162 Query: 62 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104163 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 104222 Query: 122 gtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctg 181 ||||||||||||||||||||||||||| ||| ||||||||||||| ||||||||| Sbjct: 104223 gtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccgta--- 104279 Query: 182 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 241 |||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||| Sbjct: 104280 agctcccaagcagtgggaggagaatgtgatctctgaccgcgtgcctgttgaagaatgagc 104339 Query: 242 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 301 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 104340 cggcgactcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaa 104394 Query: 302 gcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 361 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104395 gcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 104454 Query: 362 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 421 |||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||| Sbjct: 104455 gaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaat 104514 Query: 422 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104515 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 104574 Query: 482 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 541 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 104575 cccgaaatgcgttgaggcgcagcagttgactagacatctaggggtaaagcactgtttcgg 104634 Query: 542 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 586 ||||||| ||| ||||||||||||||||||||||||||||||||| Sbjct: 104635 tgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatac 104679
>gb|AY916449.1| Phalaenopsis aphrodite subsp. formosana plastid, complete genome Length = 148964 Score = 967 bits (488), Expect = 0.0 Identities = 559/582 (96%), Gaps = 8/582 (1%) Strand = Plus / Minus Query: 5 catcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatca 64 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127506 catcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatca 127447 Query: 65 gcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtg 124 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127446 gcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtg 127387 Query: 125 agggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagc 184 |||||||||||||||||||||||| ||| ||||||||||||| |||||||||| ||| Sbjct: 127386 agggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccgtg---agc 127330 Query: 185 tcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccgg 244 ||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||| Sbjct: 127329 tcccaagcagtgggaggagaatgtgatctctgaccgcgtgcctgttgaagaatgagccgg 127270 Query: 245 cgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcg 304 ||||||||||||||||||||||||||||||| |||||| |||||||||||||||| Sbjct: 127269 cgactcataggcagtggcttggttaagggaat-----ccaccgtagccgtagcgaaagcg 127215 Query: 305 agtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgac 364 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127214 agtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgac 127155 Query: 365 caggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcag 424 ||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||| Sbjct: 127154 caggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcag 127095 Query: 425 cggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcccc 484 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127094 cggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcccc 127035 Query: 485 gaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgc 544 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127034 gaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgc 126975 Query: 545 gggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 586 |||| ||| ||||||||||||||||||||||||||||||||| Sbjct: 126974 gggccgcgagagcggtaccaaatcgaggcaaactctgaatac 126933 Score = 967 bits (488), Expect = 0.0 Identities = 559/582 (96%), Gaps = 8/582 (1%) Strand = Plus / Plus Query: 5 catcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatca 64 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107416 catcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatca 107475 Query: 65 gcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtg 124 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107476 gcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtg 107535 Query: 125 agggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagc 184 |||||||||||||||||||||||| ||| ||||||||||||| |||||||||| ||| Sbjct: 107536 agggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccgtg---agc 107592 Query: 185 tcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccgg 244 ||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||| Sbjct: 107593 tcccaagcagtgggaggagaatgtgatctctgaccgcgtgcctgttgaagaatgagccgg 107652 Query: 245 cgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcg 304 ||||||||||||||||||||||||||||||| |||||| |||||||||||||||| Sbjct: 107653 cgactcataggcagtggcttggttaagggaat-----ccaccgtagccgtagcgaaagcg 107707 Query: 305 agtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgac 364 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107708 agtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgac 107767 Query: 365 caggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcag 424 ||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||| Sbjct: 107768 caggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcag 107827 Query: 425 cggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcccc 484 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107828 cggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcccc 107887 Query: 485 gaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgc 544 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107888 gaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgc 107947 Query: 545 gggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 586 |||| ||| ||||||||||||||||||||||||||||||||| Sbjct: 107948 gggccgcgagagcggtaccaaatcgaggcaaactctgaatac 107989
>emb|AJ627251.1| Nymphaea alba chloroplast, complete genome Length = 159930 Score = 957 bits (483), Expect = 0.0 Identities = 560/585 (95%), Gaps = 8/585 (1%) Strand = Plus / Minus Query: 2 aagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 61 |||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139231 aagcatcactggcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 139172 Query: 62 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139171 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 139112 Query: 122 gtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctg 181 ||||||||||||||||||||||||||| ||| ||||||||||||| |||||||||| Sbjct: 139111 gtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccgtg--- 139055 Query: 182 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 241 |||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| Sbjct: 139054 agctcccaagcagtgggaggagaatttgatctctgaccgcgtgcctgttgaagaatgagc 138995 Query: 242 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 301 ||||||||||||||||||||||||||||||||||| ||||||||||| |||||||| Sbjct: 138994 cggcgactcataggcagtggcttggttaagggaac-----ccaccggagccatagcgaaa 138940 Query: 302 gcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 361 ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 138939 gcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccat 138880 Query: 362 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 421 |||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||| Sbjct: 138879 gaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaat 138820 Query: 422 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138819 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 138760 Query: 482 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138759 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 138700 Query: 542 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 586 ||||||| ||| ||||||||||||||||||||||||||||||||| Sbjct: 138699 tgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatac 138655 Score = 957 bits (483), Expect = 0.0 Identities = 560/585 (95%), Gaps = 8/585 (1%) Strand = Plus / Plus Query: 2 aagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 61 |||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110714 aagcatcactggcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 110773 Query: 62 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110774 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 110833 Query: 122 gtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctg 181 ||||||||||||||||||||||||||| ||| ||||||||||||| |||||||||| Sbjct: 110834 gtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccgtg--- 110890 Query: 182 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 241 |||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| Sbjct: 110891 agctcccaagcagtgggaggagaatttgatctctgaccgcgtgcctgttgaagaatgagc 110950 Query: 242 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 301 ||||||||||||||||||||||||||||||||||| ||||||||||| |||||||| Sbjct: 110951 cggcgactcataggcagtggcttggttaagggaac-----ccaccggagccatagcgaaa 111005 Query: 302 gcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 361 ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 111006 gcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccat 111065 Query: 362 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 421 |||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||| Sbjct: 111066 gaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaat 111125 Query: 422 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111126 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 111185 Query: 482 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111186 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 111245 Query: 542 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 586 ||||||| ||| ||||||||||||||||||||||||||||||||| Sbjct: 111246 tgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatac 111290
>emb|AJ506156.2|ATR506156 Amborella trichopoda chloroplast genomic DNA, complete sequence Length = 162686 Score = 957 bits (483), Expect = 0.0 Identities = 560/585 (95%), Gaps = 8/585 (1%) Strand = Plus / Minus Query: 2 aagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 61 |||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141753 aagcatcactggcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 141694 Query: 62 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 121 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 141693 tcagcaaggaccaccttgtaaggctaaatactcctgggtgaccgatagcgaagtagtacc 141634 Query: 122 gtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctg 181 ||||||||||||||||||||||||||| ||| ||||||||||||| |||||||||| Sbjct: 141633 gtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccgtg--- 141577 Query: 182 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 241 |||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| Sbjct: 141576 agctcccaagcagtgggaggagaatttgatctctgaccgcgtgcctgttgaagaatgagc 141517 Query: 242 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 301 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 141516 cggcgactcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaa 141462 Query: 302 gcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 361 ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 141461 gcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccat 141402 Query: 362 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 421 |||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||| Sbjct: 141401 gaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaat 141342 Query: 422 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141341 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 141282 Query: 482 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141281 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 141222 Query: 542 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 586 ||||||| ||| ||||||||||||||||||||||||||||||||| Sbjct: 141221 tgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatac 141177 Score = 957 bits (483), Expect = 0.0 Identities = 560/585 (95%), Gaps = 8/585 (1%) Strand = Plus / Plus Query: 2 aagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 61 |||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111904 aagcatcactggcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 111963 Query: 62 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 121 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 111964 tcagcaaggaccaccttgtaaggctaaatactcctgggtgaccgatagcgaagtagtacc 112023 Query: 122 gtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctg 181 ||||||||||||||||||||||||||| ||| ||||||||||||| |||||||||| Sbjct: 112024 gtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccgtg--- 112080 Query: 182 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 241 |||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| Sbjct: 112081 agctcccaagcagtgggaggagaatttgatctctgaccgcgtgcctgttgaagaatgagc 112140 Query: 242 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 301 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 112141 cggcgactcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaa 112195 Query: 302 gcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 361 ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 112196 gcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccat 112255 Query: 362 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 421 |||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||| Sbjct: 112256 gaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaat 112315 Query: 422 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 112316 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 112375 Query: 482 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 112376 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 112435 Query: 542 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 586 ||||||| ||| ||||||||||||||||||||||||||||||||| Sbjct: 112436 tgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatac 112480
>emb|AJ428413.1|CFE428413 Calycanthus fertilis var. ferax complete chloroplast genome Length = 153337 Score = 940 bits (474), Expect = 0.0 Identities = 558/585 (95%), Gaps = 12/585 (2%) Strand = Plus / Minus Query: 2 aagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 61 |||||||||||||||| | ||| ||||||||||||||||||||||||||||||||||||| Sbjct: 134626 aagcatcactagcttacgttctaacccgagtagcatggggcacgtggaatcccgtgtgaa 134567 Query: 62 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134566 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 134507 Query: 122 gtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctg 181 ||||||||||||||||||||||||||| ||| ||||||||||||| |||||||||| Sbjct: 134506 gtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccgtg--- 134450 Query: 182 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 241 |||||||||||||||||||| |||| ||||||||||||||||||||||||||||||| Sbjct: 134449 agctcccaagcagtgggaggagaaa----tctctgaccgcgtgcctgttgaagaatgagc 134394 Query: 242 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 301 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 134393 cggcgactcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaa 134339 Query: 302 gcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 361 ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 134338 gcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccat 134279 Query: 362 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 421 |||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||| Sbjct: 134278 gaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaat 134219 Query: 422 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134218 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 134159 Query: 482 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134158 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 134099 Query: 542 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 586 ||||||| ||| ||||||||||||||||||||||||||||||||| Sbjct: 134098 tgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatac 134054 Score = 940 bits (474), Expect = 0.0 Identities = 558/585 (95%), Gaps = 12/585 (2%) Strand = Plus / Plus Query: 2 aagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 61 |||||||||||||||| | ||| ||||||||||||||||||||||||||||||||||||| Sbjct: 105656 aagcatcactagcttacgttctaacccgagtagcatggggcacgtggaatcccgtgtgaa 105715 Query: 62 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105716 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 105775 Query: 122 gtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctg 181 ||||||||||||||||||||||||||| ||| ||||||||||||| |||||||||| Sbjct: 105776 gtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccgtg--- 105832 Query: 182 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 241 |||||||||||||||||||| |||| ||||||||||||||||||||||||||||||| Sbjct: 105833 agctcccaagcagtgggaggagaaa----tctctgaccgcgtgcctgttgaagaatgagc 105888 Query: 242 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 301 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 105889 cggcgactcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaa 105943 Query: 302 gcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 361 ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 105944 gcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccat 106003 Query: 362 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 421 |||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||| Sbjct: 106004 gaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaat 106063 Query: 422 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106064 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 106123 Query: 482 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106124 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 106183 Query: 542 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 586 ||||||| ||| ||||||||||||||||||||||||||||||||| Sbjct: 106184 tgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatac 106228
>emb|Z00044.2|CHNTXX Nicotiana tabacum chloroplast genome DNA Length = 155943 Score = 936 bits (472), Expect = 0.0 Identities = 558/585 (95%), Gaps = 10/585 (1%) Strand = Plus / Minus Query: 2 aagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135944 aagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 135885 Query: 62 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135884 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 135825 Query: 122 gtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctg 181 ||||||||| ||||||||||||||||| ||| ||||||||||||| ||||||||| Sbjct: 135824 gtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccgta--- 135768 Query: 182 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 241 |||||||||||||||||||| | || | |||||||||||||||||||||||||||||| Sbjct: 135767 agctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagc 135710 Query: 242 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 301 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 135709 cggcgactcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaa 135655 Query: 302 gcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 361 ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 135654 gcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccat 135595 Query: 362 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 421 |||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||| Sbjct: 135594 gaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaat 135535 Query: 422 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135534 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 135475 Query: 482 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135474 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 135415 Query: 542 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 586 ||||||| ||| ||||||||||||||||||||||||||||||||| Sbjct: 135414 tgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatac 135370 Score = 936 bits (472), Expect = 0.0 Identities = 558/585 (95%), Gaps = 10/585 (1%) Strand = Plus / Plus Query: 2 aagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106686 aagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 106745 Query: 62 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106746 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 106805 Query: 122 gtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctg 181 ||||||||| ||||||||||||||||| ||| ||||||||||||| ||||||||| Sbjct: 106806 gtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccgta--- 106862 Query: 182 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 241 |||||||||||||||||||| | || | |||||||||||||||||||||||||||||| Sbjct: 106863 agctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagc 106920 Query: 242 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 301 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 106921 cggcgactcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaa 106975 Query: 302 gcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 361 ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 106976 gcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccat 107035 Query: 362 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 421 |||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||| Sbjct: 107036 gaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaat 107095 Query: 422 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107096 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 107155 Query: 482 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107156 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 107215 Query: 542 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 586 ||||||| ||| ||||||||||||||||||||||||||||||||| Sbjct: 107216 tgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatac 107260
>gb|AY123764.1| Nicotiana tabacum chloroplast 16S ribosomal RNA-23S ribosomal RNA intergenic spacer region and 23S ribosomal RNA gene, partial sequences Length = 3735 Score = 936 bits (472), Expect = 0.0 Identities = 558/585 (95%), Gaps = 10/585 (1%) Strand = Plus / Plus Query: 2 aagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1880 aagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 1939 Query: 62 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1940 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 1999 Query: 122 gtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctg 181 ||||||||| ||||||||||||||||| ||| ||||||||||||| ||||||||| Sbjct: 2000 gtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccgta--- 2056 Query: 182 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 241 |||||||||||||||||||| | || | |||||||||||||||||||||||||||||| Sbjct: 2057 agctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagc 2114 Query: 242 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 301 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 2115 cggcgactcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaa 2169 Query: 302 gcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 361 ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 2170 gcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccat 2229 Query: 362 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 421 |||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||| Sbjct: 2230 gaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaat 2289 Query: 422 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2290 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 2349 Query: 482 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2350 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 2409 Query: 542 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 586 ||||||| ||| ||||||||||||||||||||||||||||||||| Sbjct: 2410 tgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatac 2454
>dbj|AB237912.1| Nicotiana sylvestris chloroplast DNA, complete sequence Length = 155941 Score = 936 bits (472), Expect = 0.0 Identities = 558/585 (95%), Gaps = 10/585 (1%) Strand = Plus / Minus Query: 2 aagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135942 aagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 135883 Query: 62 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135882 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 135823 Query: 122 gtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctg 181 ||||||||| ||||||||||||||||| ||| ||||||||||||| ||||||||| Sbjct: 135822 gtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccgta--- 135766 Query: 182 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 241 |||||||||||||||||||| | || | |||||||||||||||||||||||||||||| Sbjct: 135765 agctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagc 135708 Query: 242 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 301 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 135707 cggcgactcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaa 135653 Query: 302 gcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 361 ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 135652 gcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccat 135593 Query: 362 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 421 |||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||| Sbjct: 135592 gaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaat 135533 Query: 422 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135532 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 135473 Query: 482 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135472 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 135413 Query: 542 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 586 ||||||| ||| ||||||||||||||||||||||||||||||||| Sbjct: 135412 tgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatac 135368 Score = 936 bits (472), Expect = 0.0 Identities = 558/585 (95%), Gaps = 10/585 (1%) Strand = Plus / Plus Query: 2 aagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106684 aagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 106743 Query: 62 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106744 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 106803 Query: 122 gtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctg 181 ||||||||| ||||||||||||||||| ||| ||||||||||||| ||||||||| Sbjct: 106804 gtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccgta--- 106860 Query: 182 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 241 |||||||||||||||||||| | || | |||||||||||||||||||||||||||||| Sbjct: 106861 agctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagc 106918 Query: 242 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 301 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 106919 cggcgactcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaa 106973 Query: 302 gcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 361 ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 106974 gcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccat 107033 Query: 362 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 421 |||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||| Sbjct: 107034 gaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaat 107093 Query: 422 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107094 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 107153 Query: 482 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107154 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 107213 Query: 542 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 586 ||||||| ||| ||||||||||||||||||||||||||||||||| Sbjct: 107214 tgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatac 107258
>dbj|AB240139.1| Nicotiana tomentosiformis chloroplast DNA, complete sequence Length = 155745 Score = 936 bits (472), Expect = 0.0 Identities = 558/585 (95%), Gaps = 10/585 (1%) Strand = Plus / Minus Query: 2 aagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135673 aagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 135614 Query: 62 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135613 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 135554 Query: 122 gtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctg 181 ||||||||| ||||||||||||||||| ||| ||||||||||||| ||||||||| Sbjct: 135553 gtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccgta--- 135497 Query: 182 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 241 |||||||||||||||||||| | || | |||||||||||||||||||||||||||||| Sbjct: 135496 agctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagc 135439 Query: 242 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 301 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 135438 cggcgactcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaa 135384 Query: 302 gcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 361 ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 135383 gcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccat 135324 Query: 362 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 421 |||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||| Sbjct: 135323 gaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaat 135264 Query: 422 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135263 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 135204 Query: 482 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135203 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 135144 Query: 542 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 586 ||||||| ||| ||||||||||||||||||||||||||||||||| Sbjct: 135143 tgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatac 135099 Score = 936 bits (472), Expect = 0.0 Identities = 558/585 (95%), Gaps = 10/585 (1%) Strand = Plus / Plus Query: 2 aagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106465 aagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 106524 Query: 62 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106525 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 106584 Query: 122 gtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctg 181 ||||||||| ||||||||||||||||| ||| ||||||||||||| ||||||||| Sbjct: 106585 gtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccgta--- 106641 Query: 182 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 241 |||||||||||||||||||| | || | |||||||||||||||||||||||||||||| Sbjct: 106642 agctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagc 106699 Query: 242 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 301 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 106700 cggcgactcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaa 106754 Query: 302 gcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 361 ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 106755 gcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccat 106814 Query: 362 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 421 |||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||| Sbjct: 106815 gaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaat 106874 Query: 422 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106875 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 106934 Query: 482 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106935 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 106994 Query: 542 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 586 ||||||| ||| ||||||||||||||||||||||||||||||||| Sbjct: 106995 tgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatac 107039
>emb|AJ316582.1|ABE316582 Atropa belladonna complete chloroplast genome, strain Ab5p(kan) Length = 156687 Score = 928 bits (468), Expect = 0.0 Identities = 557/585 (95%), Gaps = 10/585 (1%) Strand = Plus / Minus Query: 2 aagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 61 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136582 aagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 136523 Query: 62 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136522 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 136463 Query: 122 gtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctg 181 ||||||||| ||||||||||||||||| ||| ||||||||||||| ||||||||| Sbjct: 136462 gtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccgta--- 136406 Query: 182 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 241 |||||||||||||||||||| | || | |||||||||||||||||||||||||||||| Sbjct: 136405 agctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagc 136348 Query: 242 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 301 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 136347 cggcgactcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaa 136293 Query: 302 gcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 361 ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 136292 gcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccat 136233 Query: 362 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 421 |||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||| Sbjct: 136232 gaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaat 136173 Query: 422 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136172 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 136113 Query: 482 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136112 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 136053 Query: 542 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 586 ||||||| ||| ||||||||||||||||||||||||||||||||| Sbjct: 136052 tgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatac 136008 Score = 928 bits (468), Expect = 0.0 Identities = 557/585 (95%), Gaps = 10/585 (1%) Strand = Plus / Plus Query: 2 aagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 61 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106975 aagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 107034 Query: 62 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107035 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 107094 Query: 122 gtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctg 181 ||||||||| ||||||||||||||||| ||| ||||||||||||| ||||||||| Sbjct: 107095 gtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccgta--- 107151 Query: 182 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 241 |||||||||||||||||||| | || | |||||||||||||||||||||||||||||| Sbjct: 107152 agctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagc 107209 Query: 242 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 301 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 107210 cggcgactcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaa 107264 Query: 302 gcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 361 ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 107265 gcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccat 107324 Query: 362 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 421 |||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||| Sbjct: 107325 gaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaat 107384 Query: 422 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107385 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 107444 Query: 482 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107445 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 107504 Query: 542 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 586 ||||||| ||| ||||||||||||||||||||||||||||||||| Sbjct: 107505 tgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatac 107549
>gb|DQ386163.1| Solanum tuberosum cultivar Desiree chloroplast, complete genome Length = 155298 Score = 928 bits (468), Expect = 0.0 Identities = 557/585 (95%), Gaps = 10/585 (1%) Strand = Plus / Minus Query: 2 aagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 61 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135190 aagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 135131 Query: 62 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135130 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 135071 Query: 122 gtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctg 181 ||||||||| ||||||||||||||||| ||| ||||||||||||| ||||||||| Sbjct: 135070 gtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccgta--- 135014 Query: 182 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 241 |||||||||||||||||||| | || | |||||||||||||||||||||||||||||| Sbjct: 135013 agctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagc 134956 Query: 242 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 301 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 134955 cggcgactcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaa 134901 Query: 302 gcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 361 ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 134900 gcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccat 134841 Query: 362 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 421 |||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||| Sbjct: 134840 gaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaat 134781 Query: 422 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134780 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 134721 Query: 482 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134720 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 134661 Query: 542 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 586 ||||||| ||| ||||||||||||||||||||||||||||||||| Sbjct: 134660 tgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatac 134616 Score = 928 bits (468), Expect = 0.0 Identities = 557/585 (95%), Gaps = 10/585 (1%) Strand = Plus / Plus Query: 2 aagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 61 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105846 aagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 105905 Query: 62 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105906 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 105965 Query: 122 gtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctg 181 ||||||||| ||||||||||||||||| ||| ||||||||||||| ||||||||| Sbjct: 105966 gtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccgta--- 106022 Query: 182 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 241 |||||||||||||||||||| | || | |||||||||||||||||||||||||||||| Sbjct: 106023 agctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagc 106080 Query: 242 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 301 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 106081 cggcgactcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaa 106135 Query: 302 gcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 361 ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 106136 gcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccat 106195 Query: 362 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 421 |||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||| Sbjct: 106196 gaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaat 106255 Query: 422 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106256 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 106315 Query: 482 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106316 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 106375 Query: 542 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 586 ||||||| ||| ||||||||||||||||||||||||||||||||| Sbjct: 106376 tgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatac 106420
>gb|AY582139.1| Panax ginseng chloroplast, complete genome Length = 156318 Score = 928 bits (468), Expect = 0.0 Identities = 557/585 (95%), Gaps = 10/585 (1%) Strand = Plus / Minus Query: 2 aagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 61 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136236 aagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 136177 Query: 62 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136176 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 136117 Query: 122 gtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctg 181 ||||||||| ||||||||||||||||| ||| ||||||||||||| ||||||||| Sbjct: 136116 gtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccgta--- 136060 Query: 182 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 241 |||||||||||||||||||| | || | |||||||||||||||||||||||||||||| Sbjct: 136059 agctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagc 136002 Query: 242 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 301 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 136001 cggcgactcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaa 135947 Query: 302 gcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 361 ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 135946 gcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccat 135887 Query: 362 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 421 |||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||| Sbjct: 135886 gaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaat 135827 Query: 422 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135826 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 135767 Query: 482 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135766 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 135707 Query: 542 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 586 ||||||| ||| ||||||||||||||||||||||||||||||||| Sbjct: 135706 tgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatac 135662 Score = 928 bits (468), Expect = 0.0 Identities = 557/585 (95%), Gaps = 10/585 (1%) Strand = Plus / Plus Query: 2 aagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 61 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106189 aagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 106248 Query: 62 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106249 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 106308 Query: 122 gtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctg 181 ||||||||| ||||||||||||||||| ||| ||||||||||||| ||||||||| Sbjct: 106309 gtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccgta--- 106365 Query: 182 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 241 |||||||||||||||||||| | || | |||||||||||||||||||||||||||||| Sbjct: 106366 agctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagc 106423 Query: 242 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 301 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 106424 cggcgactcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaa 106478 Query: 302 gcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 361 ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 106479 gcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccat 106538 Query: 362 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 421 |||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||| Sbjct: 106539 gaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaat 106598 Query: 422 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106599 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 106658 Query: 482 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106659 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 106718 Query: 542 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 586 ||||||| ||| ||||||||||||||||||||||||||||||||| Sbjct: 106719 tgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatac 106763
>emb|AM087200.2| Lycopersicon esculentum complete chloroplast genome Length = 155460 Score = 928 bits (468), Expect = 0.0 Identities = 557/585 (95%), Gaps = 10/585 (1%) Strand = Plus / Minus Query: 2 aagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 61 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135325 aagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 135266 Query: 62 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135265 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 135206 Query: 122 gtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctg 181 ||||||||| ||||||||||||||||| ||| ||||||||||||| ||||||||| Sbjct: 135205 gtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccgta--- 135149 Query: 182 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 241 |||||||||||||||||||| | || | |||||||||||||||||||||||||||||| Sbjct: 135148 agctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagc 135091 Query: 242 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 301 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 135090 cggcgactcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaa 135036 Query: 302 gcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 361 ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 135035 gcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccat 134976 Query: 362 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 421 |||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||| Sbjct: 134975 gaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaat 134916 Query: 422 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134915 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 134856 Query: 482 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134855 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 134796 Query: 542 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 586 ||||||| ||| ||||||||||||||||||||||||||||||||| Sbjct: 134795 tgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatac 134751 Score = 928 bits (468), Expect = 0.0 Identities = 557/585 (95%), Gaps = 10/585 (1%) Strand = Plus / Plus Query: 2 aagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 61 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106018 aagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 106077 Query: 62 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106078 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 106137 Query: 122 gtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctg 181 ||||||||| ||||||||||||||||| ||| ||||||||||||| ||||||||| Sbjct: 106138 gtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccgta--- 106194 Query: 182 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 241 |||||||||||||||||||| | || | |||||||||||||||||||||||||||||| Sbjct: 106195 agctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagc 106252 Query: 242 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 301 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 106253 cggcgactcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaa 106307 Query: 302 gcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 361 ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 106308 gcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccat 106367 Query: 362 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 421 |||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||| Sbjct: 106368 gaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaat 106427 Query: 422 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106428 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 106487 Query: 482 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106488 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 106547 Query: 542 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 586 ||||||| ||| ||||||||||||||||||||||||||||||||| Sbjct: 106548 tgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatac 106592
>gb|DQ347959.1| Lycopersicon esculentum cultivar LA3023 chloroplast, complete genome Length = 155461 Score = 928 bits (468), Expect = 0.0 Identities = 557/585 (95%), Gaps = 10/585 (1%) Strand = Plus / Minus Query: 2 aagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 61 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135323 aagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 135264 Query: 62 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135263 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 135204 Query: 122 gtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctg 181 ||||||||| ||||||||||||||||| ||| ||||||||||||| ||||||||| Sbjct: 135203 gtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccgta--- 135147 Query: 182 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 241 |||||||||||||||||||| | || | |||||||||||||||||||||||||||||| Sbjct: 135146 agctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagc 135089 Query: 242 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 301 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 135088 cggcgactcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaa 135034 Query: 302 gcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 361 ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 135033 gcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccat 134974 Query: 362 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 421 |||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||| Sbjct: 134973 gaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaat 134914 Query: 422 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134913 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 134854 Query: 482 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134853 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 134794 Query: 542 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 586 ||||||| ||| ||||||||||||||||||||||||||||||||| Sbjct: 134793 tgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatac 134749 Score = 928 bits (468), Expect = 0.0 Identities = 557/585 (95%), Gaps = 10/585 (1%) Strand = Plus / Plus Query: 2 aagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 61 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106015 aagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 106074 Query: 62 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106075 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 106134 Query: 122 gtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctg 181 ||||||||| ||||||||||||||||| ||| ||||||||||||| ||||||||| Sbjct: 106135 gtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccgta--- 106191 Query: 182 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 241 |||||||||||||||||||| | || | |||||||||||||||||||||||||||||| Sbjct: 106192 agctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagc 106249 Query: 242 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 301 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 106250 cggcgactcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaa 106304 Query: 302 gcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 361 ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 106305 gcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccat 106364 Query: 362 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 421 |||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||| Sbjct: 106365 gaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaat 106424 Query: 422 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106425 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 106484 Query: 482 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106485 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 106544 Query: 542 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 586 ||||||| ||| ||||||||||||||||||||||||||||||||| Sbjct: 106545 tgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatac 106589
>gb|DQ347958.1| Solanum bulbocastanum cultivar PT29 chloroplast, complete genome Length = 155371 Score = 928 bits (468), Expect = 0.0 Identities = 557/585 (95%), Gaps = 10/585 (1%) Strand = Plus / Minus Query: 2 aagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 61 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135235 aagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 135176 Query: 62 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135175 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 135116 Query: 122 gtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctg 181 ||||||||| ||||||||||||||||| ||| ||||||||||||| ||||||||| Sbjct: 135115 gtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccgta--- 135059 Query: 182 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 241 |||||||||||||||||||| | || | |||||||||||||||||||||||||||||| Sbjct: 135058 agctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagc 135001 Query: 242 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 301 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 135000 cggcgactcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaa 134946 Query: 302 gcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 361 ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 134945 gcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccat 134886 Query: 362 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 421 |||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||| Sbjct: 134885 gaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaat 134826 Query: 422 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134825 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 134766 Query: 482 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134765 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 134706 Query: 542 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 586 ||||||| ||| ||||||||||||||||||||||||||||||||| Sbjct: 134705 tgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatac 134661 Score = 928 bits (468), Expect = 0.0 Identities = 557/585 (95%), Gaps = 10/585 (1%) Strand = Plus / Plus Query: 2 aagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 61 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105893 aagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 105952 Query: 62 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105953 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 106012 Query: 122 gtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctg 181 ||||||||| ||||||||||||||||| ||| ||||||||||||| ||||||||| Sbjct: 106013 gtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccgta--- 106069 Query: 182 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 241 |||||||||||||||||||| | || | |||||||||||||||||||||||||||||| Sbjct: 106070 agctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagc 106127 Query: 242 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 301 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 106128 cggcgactcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaa 106182 Query: 302 gcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 361 ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 106183 gcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccat 106242 Query: 362 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 421 |||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||| Sbjct: 106243 gaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaat 106302 Query: 422 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106303 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 106362 Query: 482 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106363 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 106422 Query: 542 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 586 ||||||| ||| ||||||||||||||||||||||||||||||||| Sbjct: 106423 tgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatac 106467
>gb|DQ383816.1| Lactuca sativa cultivar Salinas chloroplast, complete genome Length = 152772 Score = 926 bits (467), Expect = 0.0 Identities = 557/585 (95%), Gaps = 9/585 (1%) Strand = Plus / Minus Query: 2 aagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132420 aagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 132361 Query: 62 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132360 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 132301 Query: 122 gtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctg 181 ||||||||| ||||||||||||||||| ||| ||||||||||||| ||||||||| Sbjct: 132300 gtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccgta--- 132244 Query: 182 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 241 |||||||||||||||||||| | | | |||||||||||||||||||||||||||||| Sbjct: 132243 agctcccaagcagtgggaggagcccgggg-ctctgaccgcgtgcctgttgaagaatgagc 132185 Query: 242 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 301 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 132184 cggcgactcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaa 132130 Query: 302 gcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 361 ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 132129 gcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccat 132070 Query: 362 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 421 |||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||| Sbjct: 132069 gaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaat 132010 Query: 422 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132009 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 131950 Query: 482 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131949 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 131890 Query: 542 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 586 ||||||| ||| ||||||||||||||||||||||||||||||||| Sbjct: 131889 tgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatac 131845 Score = 926 bits (467), Expect = 0.0 Identities = 557/585 (95%), Gaps = 9/585 (1%) Strand = Plus / Plus Query: 2 aagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104458 aagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 104517 Query: 62 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104518 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 104577 Query: 122 gtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctg 181 ||||||||| ||||||||||||||||| ||| ||||||||||||| ||||||||| Sbjct: 104578 gtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccgta--- 104634 Query: 182 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 241 |||||||||||||||||||| | | | |||||||||||||||||||||||||||||| Sbjct: 104635 agctcccaagcagtgggaggagcccgggg-ctctgaccgcgtgcctgttgaagaatgagc 104693 Query: 242 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 301 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 104694 cggcgactcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaa 104748 Query: 302 gcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 361 ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 104749 gcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccat 104808 Query: 362 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 421 |||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||| Sbjct: 104809 gaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaat 104868 Query: 422 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104869 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 104928 Query: 482 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104929 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 104988 Query: 542 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 586 ||||||| ||| ||||||||||||||||||||||||||||||||| Sbjct: 104989 tgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatac 105033
>emb|AJ400848.1|SOL400848 Spinacia oleracea complete chloroplast genome Length = 150725 Score = 926 bits (467), Expect = 0.0 Identities = 557/585 (95%), Gaps = 9/585 (1%) Strand = Plus / Minus Query: 2 aagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131436 aagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 131377 Query: 62 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131376 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 131317 Query: 122 gtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctg 181 ||||||||| ||||||||||||||||| ||| ||||||||||||| ||||||||| Sbjct: 131316 gtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccgta--- 131260 Query: 182 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 241 ||||| |||||||||||||||| | || | |||||||||||||||||||||||||||| Sbjct: 131259 agctctcaagcagtgggagggggaccagacc-ctgaccgcgtgcctgttgaagaatgagc 131201 Query: 242 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 301 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 131200 cggcgactcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaa 131146 Query: 302 gcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 361 ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 131145 gcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccat 131086 Query: 362 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 421 |||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||| Sbjct: 131085 gaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaat 131026 Query: 422 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131025 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 130966 Query: 482 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130965 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 130906 Query: 542 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 586 ||||||| ||| ||||||||||||||||||||||||||||||||| Sbjct: 130905 tgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatac 130861 Score = 926 bits (467), Expect = 0.0 Identities = 557/585 (95%), Gaps = 9/585 (1%) Strand = Plus / Plus Query: 2 aagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102009 aagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 102068 Query: 62 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102069 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 102128 Query: 122 gtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctg 181 ||||||||| ||||||||||||||||| ||| ||||||||||||| ||||||||| Sbjct: 102129 gtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccgta--- 102185 Query: 182 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 241 ||||| |||||||||||||||| | || | |||||||||||||||||||||||||||| Sbjct: 102186 agctctcaagcagtgggagggggaccagacc-ctgaccgcgtgcctgttgaagaatgagc 102244 Query: 242 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 301 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 102245 cggcgactcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaa 102299 Query: 302 gcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 361 ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 102300 gcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccat 102359 Query: 362 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 421 |||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||| Sbjct: 102360 gaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaat 102419 Query: 422 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102420 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 102479 Query: 482 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102480 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 102539 Query: 542 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 586 ||||||| ||| ||||||||||||||||||||||||||||||||| Sbjct: 102540 tgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatac 102584
>dbj|AP007232.1| Lactuca sativa chloroplast DNA, complete genome Length = 152765 Score = 926 bits (467), Expect = 0.0 Identities = 557/585 (95%), Gaps = 9/585 (1%) Strand = Plus / Minus Query: 2 aagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132413 aagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 132354 Query: 62 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132353 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 132294 Query: 122 gtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctg 181 ||||||||| ||||||||||||||||| ||| ||||||||||||| ||||||||| Sbjct: 132293 gtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccgta--- 132237 Query: 182 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 241 |||||||||||||||||||| | | | |||||||||||||||||||||||||||||| Sbjct: 132236 agctcccaagcagtgggaggagcccgggg-ctctgaccgcgtgcctgttgaagaatgagc 132178 Query: 242 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 301 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 132177 cggcgactcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaa 132123 Query: 302 gcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 361 ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 132122 gcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccat 132063 Query: 362 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 421 |||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||| Sbjct: 132062 gaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaat 132003 Query: 422 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132002 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 131943 Query: 482 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131942 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 131883 Query: 542 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 586 ||||||| ||| ||||||||||||||||||||||||||||||||| Sbjct: 131882 tgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatac 131838 Score = 926 bits (467), Expect = 0.0 Identities = 557/585 (95%), Gaps = 9/585 (1%) Strand = Plus / Plus Query: 2 aagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104456 aagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 104515 Query: 62 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104516 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 104575 Query: 122 gtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctg 181 ||||||||| ||||||||||||||||| ||| ||||||||||||| ||||||||| Sbjct: 104576 gtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccgta--- 104632 Query: 182 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 241 |||||||||||||||||||| | | | |||||||||||||||||||||||||||||| Sbjct: 104633 agctcccaagcagtgggaggagcccgggg-ctctgaccgcgtgcctgttgaagaatgagc 104691 Query: 242 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 301 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 104692 cggcgactcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaa 104746 Query: 302 gcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 361 ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 104747 gcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccat 104806 Query: 362 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 421 |||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||| Sbjct: 104807 gaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaat 104866 Query: 422 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104867 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 104926 Query: 482 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104927 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 104986 Query: 542 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 586 ||||||| ||| ||||||||||||||||||||||||||||||||| Sbjct: 104987 tgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatac 105031
>emb|AJ271079.2|OEL271079 Oenothera elata subsp. hookeri chloroplast plastome I, complete sequence Length = 163935 Score = 920 bits (464), Expect = 0.0 Identities = 556/585 (95%), Gaps = 10/585 (1%) Strand = Plus / Minus Query: 2 aagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 61 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142523 aagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 142464 Query: 62 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 121 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 142463 tcagcaaggaccaccttgtaaggctaaatactcctgggtgaccgatagcgaagtagtacc 142404 Query: 122 gtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctg 181 ||||||||| ||||||||||||||||| ||| ||||||||||||| ||||||||| Sbjct: 142403 gtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccgtag-- 142346 Query: 182 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 241 ||||||||||||||||||| | || | |||||||||||||||||||||||||||||| Sbjct: 142345 -gctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagc 142289 Query: 242 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 301 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 142288 cggcgactcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaa 142234 Query: 302 gcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 361 ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 142233 gcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccat 142174 Query: 362 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 421 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 142173 gaccaggatgaagcttggatgaaactaagcggaggtccgaaccgactgatgttgaagaat 142114 Query: 422 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 481 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 142113 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctcgttctc 142054 Query: 482 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142053 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 141994 Query: 542 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 586 ||||||| ||| ||||||||||||||||||||||||||||||||| Sbjct: 141993 tgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatac 141949 Score = 920 bits (464), Expect = 0.0 Identities = 556/585 (95%), Gaps = 10/585 (1%) Strand = Plus / Plus Query: 2 aagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 61 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110805 aagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 110864 Query: 62 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 121 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 110865 tcagcaaggaccaccttgtaaggctaaatactcctgggtgaccgatagcgaagtagtacc 110924 Query: 122 gtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctg 181 ||||||||| ||||||||||||||||| ||| ||||||||||||| ||||||||| Sbjct: 110925 gtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccgtag-- 110982 Query: 182 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 241 ||||||||||||||||||| | || | |||||||||||||||||||||||||||||| Sbjct: 110983 -gctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagc 111039 Query: 242 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 301 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 111040 cggcgactcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaa 111094 Query: 302 gcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 361 ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 111095 gcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccat 111154 Query: 362 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 421 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 111155 gaccaggatgaagcttggatgaaactaagcggaggtccgaaccgactgatgttgaagaat 111214 Query: 422 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 481 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 111215 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctcgttctc 111274 Query: 482 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111275 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 111334 Query: 542 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 586 ||||||| ||| ||||||||||||||||||||||||||||||||| Sbjct: 111335 tgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatac 111379
>gb|DQ383815.1| Helianthus annuus cultivar line HA383 chloroplast, complete genome Length = 151104 Score = 918 bits (463), Expect = 0.0 Identities = 556/585 (95%), Gaps = 9/585 (1%) Strand = Plus / Minus Query: 2 aagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 61 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131312 aagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 131253 Query: 62 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131252 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 131193 Query: 122 gtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctg 181 ||||||||| ||||||||||||||||| ||| ||||||||||||| ||||||||| Sbjct: 131192 gtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccgta--- 131136 Query: 182 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 241 |||||||||||||||||||| | | | |||||||||||||||||||||||||||||| Sbjct: 131135 agctcccaagcagtgggaggagcccgggg-ctctgaccgcgtgcctgttgaagaatgagc 131077 Query: 242 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 301 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 131076 cggcgactcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaa 131022 Query: 302 gcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 361 ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 131021 gcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccat 130962 Query: 362 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 421 |||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||| Sbjct: 130961 gaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaat 130902 Query: 422 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130901 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 130842 Query: 482 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130841 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 130782 Query: 542 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 586 ||||||| ||| ||||||||||||||||||||||||||||||||| Sbjct: 130781 tgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatac 130737 Score = 918 bits (463), Expect = 0.0 Identities = 556/585 (95%), Gaps = 9/585 (1%) Strand = Plus / Plus Query: 2 aagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 61 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103323 aagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 103382 Query: 62 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103383 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 103442 Query: 122 gtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctg 181 ||||||||| ||||||||||||||||| ||| ||||||||||||| ||||||||| Sbjct: 103443 gtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccgta--- 103499 Query: 182 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 241 |||||||||||||||||||| | | | |||||||||||||||||||||||||||||| Sbjct: 103500 agctcccaagcagtgggaggagcccgggg-ctctgaccgcgtgcctgttgaagaatgagc 103558 Query: 242 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 301 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 103559 cggcgactcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaa 103613 Query: 302 gcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 361 ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 103614 gcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccat 103673 Query: 362 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 421 |||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||| Sbjct: 103674 gaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaat 103733 Query: 422 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103734 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 103793 Query: 482 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103794 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 103853 Query: 542 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 586 ||||||| ||| ||||||||||||||||||||||||||||||||| Sbjct: 103854 tgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatac 103898
>gb|DQ231562.1| Solanum tuberosum chloroplast, complete genome Length = 155312 Score = 918 bits (463), Expect = 0.0 Identities = 555/584 (95%), Gaps = 10/584 (1%) Strand = Plus / Minus Query: 2 aagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 61 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135202 aagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 135143 Query: 62 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135142 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 135083 Query: 122 gtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctg 181 ||||||||| ||||||||||||||||| ||| ||||||||||||| ||||||||| Sbjct: 135082 gtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccgta--- 135026 Query: 182 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 241 |||||||||||||||||||| | || | |||||||||||||||||||||||||||||| Sbjct: 135025 agctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagc 134968 Query: 242 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 301 |||||||| |||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 134967 cggcgactaataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaa 134913 Query: 302 gcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 361 ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 134912 gcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccat 134853 Query: 362 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 421 |||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||| Sbjct: 134852 gaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaat 134793 Query: 422 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134792 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 134733 Query: 482 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134732 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 134673 Query: 542 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 585 ||||||| ||| |||||||||||||||||||||||||||||||| Sbjct: 134672 tgcgggccgcgagagcggtaccaaatcgaggcaaactctgaata 134629 Score = 918 bits (463), Expect = 0.0 Identities = 555/584 (95%), Gaps = 10/584 (1%) Strand = Plus / Plus Query: 2 aagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 61 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105860 aagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 105919 Query: 62 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105920 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 105979 Query: 122 gtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctg 181 ||||||||| ||||||||||||||||| ||| ||||||||||||| ||||||||| Sbjct: 105980 gtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccgta--- 106036 Query: 182 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 241 |||||||||||||||||||| | || | |||||||||||||||||||||||||||||| Sbjct: 106037 agctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagc 106094 Query: 242 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 301 |||||||| |||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 106095 cggcgactaataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaa 106149 Query: 302 gcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 361 ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 106150 gcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccat 106209 Query: 362 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 421 |||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||| Sbjct: 106210 gaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaat 106269 Query: 422 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106270 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 106329 Query: 482 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106330 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 106389 Query: 542 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 585 ||||||| ||| |||||||||||||||||||||||||||||||| Sbjct: 106390 tgcgggccgcgagagcggtaccaaatcgaggcaaactctgaata 106433
>gb|DQ424856.1| Vitis vinifera cultivar Maxxa chloroplast, complete genome Length = 160928 Score = 910 bits (459), Expect = 0.0 Identities = 555/585 (94%), Gaps = 9/585 (1%) Strand = Plus / Minus Query: 2 aagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 61 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 140005 aagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 139946 Query: 62 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139945 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 139886 Query: 122 gtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctg 181 ||||||||| ||||||||||||||||| ||| ||||||||||||| ||||||||| Sbjct: 139885 gtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccgta--- 139829 Query: 182 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 241 || ||||||||||||||||| || | | |||||||||||||||||||||||||||||| Sbjct: 139828 agttcccaagcagtgggaggagacggggg-ctctgaccgcgtgcctgttgaagaatgagc 139770 Query: 242 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 301 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 139769 cggcgactcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaa 139715 Query: 302 gcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 361 ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 139714 gcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccat 139655 Query: 362 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 421 |||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||| Sbjct: 139654 gaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaat 139595 Query: 422 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139594 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 139535 Query: 482 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 541 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 139534 cccgaaatgcgttgaggcgcagcggttgactggacatctaggggtaaagcactgtttcgg 139475 Query: 542 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 586 ||||||| ||| ||||||||||||||||||||||||||||||||| Sbjct: 139474 tgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatac 139430 Score = 910 bits (459), Expect = 0.0 Identities = 555/585 (94%), Gaps = 9/585 (1%) Strand = Plus / Plus Query: 2 aagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 61 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110055 aagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 110114 Query: 62 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110115 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 110174 Query: 122 gtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctg 181 ||||||||| ||||||||||||||||| ||| ||||||||||||| ||||||||| Sbjct: 110175 gtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccgta--- 110231 Query: 182 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 241 || ||||||||||||||||| || | | |||||||||||||||||||||||||||||| Sbjct: 110232 agttcccaagcagtgggaggagacggggg-ctctgaccgcgtgcctgttgaagaatgagc 110290 Query: 242 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 301 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 110291 cggcgactcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaa 110345 Query: 302 gcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 361 ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 110346 gcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccat 110405 Query: 362 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 421 |||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||| Sbjct: 110406 gaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaat 110465 Query: 422 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110466 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 110525 Query: 482 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 541 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 110526 cccgaaatgcgttgaggcgcagcggttgactggacatctaggggtaaagcactgtttcgg 110585 Query: 542 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 586 ||||||| ||| ||||||||||||||||||||||||||||||||| Sbjct: 110586 tgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatac 110630
>gb|DQ231548.1| Brassica rapa subsp. pekinensis chloroplast sequence Length = 153482 Score = 910 bits (459), Expect = 0.0 Identities = 555/585 (94%), Gaps = 9/585 (1%) Strand = Plus / Minus Query: 2 aagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132643 aagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 132584 Query: 62 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132583 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 132524 Query: 122 gtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctg 181 ||||||||| ||||||||||||||||| ||| ||||||||||||| ||||||||| Sbjct: 132523 gtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccgta--- 132467 Query: 182 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 241 |||||||||||||||||||| | || |||||||||||||||||||||||||||||| Sbjct: 132466 agctcccaagcagtgggaggagccc-tgggctctgaccgcgtgcctgttgaagaatgagc 132408 Query: 242 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 301 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 132407 cggcgactcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaa 132353 Query: 302 gcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 361 ||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||| || Sbjct: 132352 gcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatctat 132293 Query: 362 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 421 |||||||||||||||||| |||||||||| ||||||||||||||||||||||||| ||| Sbjct: 132292 gaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaaaaat 132233 Query: 422 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132232 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 132173 Query: 482 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132172 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 132113 Query: 542 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 586 ||||||| ||| ||||||||||||||||||||||||||||||||| Sbjct: 132112 tgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatac 132068 Score = 910 bits (459), Expect = 0.0 Identities = 555/585 (94%), Gaps = 9/585 (1%) Strand = Plus / Plus Query: 2 aagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104121 aagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 104180 Query: 62 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104181 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 104240 Query: 122 gtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctg 181 ||||||||| ||||||||||||||||| ||| ||||||||||||| ||||||||| Sbjct: 104241 gtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccgta--- 104297 Query: 182 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 241 |||||||||||||||||||| | || |||||||||||||||||||||||||||||| Sbjct: 104298 agctcccaagcagtgggaggagccc-tgggctctgaccgcgtgcctgttgaagaatgagc 104356 Query: 242 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 301 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 104357 cggcgactcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaa 104411 Query: 302 gcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 361 ||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||| || Sbjct: 104412 gcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatctat 104471 Query: 362 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 421 |||||||||||||||||| |||||||||| ||||||||||||||||||||||||| ||| Sbjct: 104472 gaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaaaaat 104531 Query: 422 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104532 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 104591 Query: 482 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104592 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 104651 Query: 542 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 586 ||||||| ||| ||||||||||||||||||||||||||||||||| Sbjct: 104652 tgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatac 104696
>dbj|AP000423.1| Arabidopsis thaliana chloroplast genomic DNA, complete sequence, strain:Columbia Length = 154478 Score = 910 bits (459), Expect = 0.0 Identities = 555/585 (94%), Gaps = 9/585 (1%) Strand = Plus / Minus Query: 2 aagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133604 aagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 133545 Query: 62 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133544 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 133485 Query: 122 gtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctg 181 ||||||||| ||||||||||||||||| ||| ||||||||||||| ||||||||| Sbjct: 133484 gtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccgta--- 133428 Query: 182 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 241 |||||||||||||||||||| | || |||||||||||||||||||||||||||||| Sbjct: 133427 agctcccaagcagtgggaggagccc-tgggctctgaccgcgtgcctgttgaagaatgagc 133369 Query: 242 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 301 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 133368 cggcgactcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaa 133314 Query: 302 gcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 361 ||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||| || Sbjct: 133313 gcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatctat 133254 Query: 362 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 421 |||||||||||||||||| |||||||||| ||||||||||||||||||||||||| ||| Sbjct: 133253 gaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaaaaat 133194 Query: 422 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133193 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 133134 Query: 482 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133133 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 133074 Query: 542 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 586 ||||||| ||| ||||||||||||||||||||||||||||||||| Sbjct: 133073 tgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatac 133029 Score = 910 bits (459), Expect = 0.0 Identities = 555/585 (94%), Gaps = 9/585 (1%) Strand = Plus / Plus Query: 2 aagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105045 aagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 105104 Query: 62 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105105 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 105164 Query: 122 gtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctg 181 ||||||||| ||||||||||||||||| ||| ||||||||||||| ||||||||| Sbjct: 105165 gtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccgta--- 105221 Query: 182 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 241 |||||||||||||||||||| | || |||||||||||||||||||||||||||||| Sbjct: 105222 agctcccaagcagtgggaggagccc-tgggctctgaccgcgtgcctgttgaagaatgagc 105280 Query: 242 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 301 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 105281 cggcgactcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaa 105335 Query: 302 gcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 361 ||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||| || Sbjct: 105336 gcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatctat 105395 Query: 362 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 421 |||||||||||||||||| |||||||||| ||||||||||||||||||||||||| ||| Sbjct: 105396 gaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaaaaat 105455 Query: 422 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105456 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 105515 Query: 482 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105516 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 105575 Query: 542 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 586 ||||||| ||| ||||||||||||||||||||||||||||||||| Sbjct: 105576 tgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatac 105620
>gb|M75722.1|ALSCP23SA Alnus incana chloroplast 23S ribosomal RNA (23S rRNA) gene Length = 2811 Score = 910 bits (459), Expect = 0.0 Identities = 555/585 (94%), Gaps = 9/585 (1%) Strand = Plus / Plus Query: 2 aagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 61 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 356 aagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 415 Query: 62 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 121 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 416 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagtgaagtagtacc 475 Query: 122 gtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctg 181 ||||||||| ||||||||||||||||| ||| ||||||||||||| ||||||||| Sbjct: 476 gtgagggaagggtgaaaagaacccccaccggggagtgaaatagaacatgaaaccgta--- 532 Query: 182 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 241 |||||||||||||||||||| | | | |||||||||||||||||||||||||||||| Sbjct: 533 agctcccaagcagtgggaggagcctgggg-ctctgaccgcgtgcctgttgaagaatgagc 591 Query: 242 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 301 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 592 cggcgactcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaa 646 Query: 302 gcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 361 ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 647 gcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccat 706 Query: 362 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 421 |||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||| Sbjct: 707 gaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaat 766 Query: 422 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 767 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 826 Query: 482 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 827 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 886 Query: 542 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 586 ||||||| ||| ||||||||||||||||||||||||||||||||| Sbjct: 887 tgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatac 931
>gb|AY096798.1| Arabidopsis thaliana At2g07707 mRNA sequence Length = 1750 Score = 908 bits (458), Expect = 0.0 Identities = 554/584 (94%), Gaps = 9/584 (1%) Strand = Plus / Plus Query: 3 agcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaat 62 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 355 agcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaat 414 Query: 63 cagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccg 122 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 415 cagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccg 474 Query: 123 tgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctga 182 |||||||| ||||||||||||||||| ||| ||||||||||||| ||||||||| | Sbjct: 475 tgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccgta---a 531 Query: 183 gctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagcc 242 ||||||||||||||||||| | || ||||||||||||||||||||||||||||||| Sbjct: 532 gctcccaagcagtgggaggagccc-tgggctctgaccgcgtgcctgttgaagaatgagcc 590 Query: 243 ggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaag 302 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 591 ggcgactcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaag 645 Query: 303 cgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatg 362 |||||||| ||||||| ||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 646 cgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatctatg 705 Query: 363 accaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 422 ||||||||||||||||| |||||||||| ||||||||||||||||||||||||| |||| Sbjct: 706 accaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaaaaatc 765 Query: 423 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 482 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 766 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 825 Query: 483 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 542 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 826 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 885 Query: 543 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 586 |||||| ||| ||||||||||||||||||||||||||||||||| Sbjct: 886 gcgggccgcgagagcggtaccaaatcgaggcaaactctgaatac 929
>gb|AY029747.1| Populus deltoides 23S ribosomal RNA, 4.5S ribosomal RNA, and 5S ribosomal RNA genes, complete sequence; chloroplast genes for chloroplast products Length = 5157 Score = 908 bits (458), Expect = 0.0 Identities = 558/587 (95%), Gaps = 12/587 (2%) Strand = Plus / Plus Query: 2 aagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2124 aagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 2183 Query: 62 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2184 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 2243 Query: 122 gtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctg 181 ||||||||| ||||||||||||||||| ||| ||||||||||||| ||||||||| Sbjct: 2244 gtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccgta--- 2300 Query: 182 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 241 |||||||||||||||||||| | || | |||||||||||||||||||||||||||||| Sbjct: 2301 agctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagc 2358 Query: 242 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 301 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 2359 cggcgactcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaa 2413 Query: 302 gcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 361 ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 2414 gcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccat 2473 Query: 362 gaccaggatgaagcttggatgaaactaagcagagg-tccgaaccgactgatgttgaagaa 420 |||||||||||||||||| |||||||||| |||| |||||||||||||||||||||||| Sbjct: 2474 gaccaggatgaagcttgggtgaaactaagtggagggtccgaaccgactgatgttgaagaa 2533 Query: 421 tcagcggatgagttgtggttaggggtgaaatg-ccactcgaacccagagctagctggttc 479 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 2534 tcagcggatgagttgtggttaggggtgaaatggccactcgaacccagagctagctggttc 2593 Query: 480 tccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttc 539 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2594 tccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttc 2653 Query: 540 ggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 586 ||||||||| ||| ||||||||||||||||||||||||||||||||| Sbjct: 2654 ggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatac 2700
>gb|AY780259.1| Eucalyptus globulus subsp. globulus chloroplast, complete genome Length = 160286 Score = 908 bits (458), Expect = 0.0 Identities = 556/587 (94%), Gaps = 10/587 (1%) Strand = Plus / Minus Query: 2 aagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 61 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139357 aagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 139298 Query: 62 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 121 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 139297 tcagcaaggaccaccttgcaaggctaaatactcctgggtgacccatagcgaagtagtacc 139238 Query: 122 gtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctg 181 ||||||||| ||||||||||||||||| ||| ||||||||||||| ||||||||| Sbjct: 139237 gtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccgta--- 139181 Query: 182 agctcccaagcagtgggagggga--aagtgatctctgaccgcgtgcctgttgaagaatga 239 |||||||||||||||||||| || | | |||||||||||||||||||||||||||| Sbjct: 139180 agctcccaagcagtgggaggagactactaggactctgaccgcgtgcctgttgaagaatga 139121 Query: 240 gccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcga 299 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 139120 gccggcgactcataggcagtggcttggttaagggaac-----ccaccggagccgtagcga 139066 Query: 300 aagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcc 359 ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 139065 aagcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatcc 139006 Query: 360 atgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaaga 419 |||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||| Sbjct: 139005 atgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaaga 138946 Query: 420 atcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttc 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138945 atcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttc 138886 Query: 480 tccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttc 539 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138885 tccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttc 138826 Query: 540 ggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 586 ||||||||| ||| ||||||||||||||||||||||||||||||||| Sbjct: 138825 ggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatac 138779 Score = 908 bits (458), Expect = 0.0 Identities = 556/587 (94%), Gaps = 10/587 (1%) Strand = Plus / Plus Query: 2 aagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 61 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109942 aagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 110001 Query: 62 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 121 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 110002 tcagcaaggaccaccttgcaaggctaaatactcctgggtgacccatagcgaagtagtacc 110061 Query: 122 gtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctg 181 ||||||||| ||||||||||||||||| ||| ||||||||||||| ||||||||| Sbjct: 110062 gtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccgta--- 110118 Query: 182 agctcccaagcagtgggagggga--aagtgatctctgaccgcgtgcctgttgaagaatga 239 |||||||||||||||||||| || | | |||||||||||||||||||||||||||| Sbjct: 110119 agctcccaagcagtgggaggagactactaggactctgaccgcgtgcctgttgaagaatga 110178 Query: 240 gccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcga 299 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 110179 gccggcgactcataggcagtggcttggttaagggaac-----ccaccggagccgtagcga 110233 Query: 300 aagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcc 359 ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 110234 aagcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatcc 110293 Query: 360 atgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaaga 419 |||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||| Sbjct: 110294 atgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaaga 110353 Query: 420 atcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttc 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110354 atcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttc 110413 Query: 480 tccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttc 539 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110414 tccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttc 110473 Query: 540 ggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 586 ||||||||| ||| ||||||||||||||||||||||||||||||||| Sbjct: 110474 ggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatac 110520
>gb|DQ345959.1| Gossypium hirsutum cultivar coker 310 FR chloroplast, complete genome Length = 160301 Score = 906 bits (457), Expect = 0.0 Identities = 556/586 (94%), Gaps = 11/586 (1%) Strand = Plus / Minus Query: 2 aagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 61 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139149 aagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 139090 Query: 62 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139089 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 139030 Query: 122 gtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctg 181 ||||||||| |||||||||||||||| ||| ||||||||||||| ||||||||| Sbjct: 139029 gtgagggaagggtgaaaagaacccccgtcggggagtgaaatagaacatgaaaccgta--- 138973 Query: 182 agctcccaagcagtgggaggggaa-agtgatctctgaccgcgtgcctgttgaagaatgag 240 |||||||||||||||||||| | || | ||||||||||||||||||||||||||||| Sbjct: 138972 agctcccaagcagtgggaggagcccaggg--ctctgaccgcgtgcctgttgaagaatgag 138915 Query: 241 ccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaa 300 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 138914 ccggcgactcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaa 138860 Query: 301 agcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 360 |||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 138859 agcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatcca 138800 Query: 361 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 420 ||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||| Sbjct: 138799 tgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaa 138740 Query: 421 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138739 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 138680 Query: 481 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138679 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 138620 Query: 541 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 586 |||||||| ||| ||||||||||||||||||||||||||||||||| Sbjct: 138619 gtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatac 138574 Score = 906 bits (457), Expect = 0.0 Identities = 556/586 (94%), Gaps = 11/586 (1%) Strand = Plus / Plus Query: 2 aagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 61 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109948 aagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 110007 Query: 62 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110008 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 110067 Query: 122 gtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctg 181 ||||||||| |||||||||||||||| ||| ||||||||||||| ||||||||| Sbjct: 110068 gtgagggaagggtgaaaagaacccccgtcggggagtgaaatagaacatgaaaccgta--- 110124 Query: 182 agctcccaagcagtgggaggggaa-agtgatctctgaccgcgtgcctgttgaagaatgag 240 |||||||||||||||||||| | || | ||||||||||||||||||||||||||||| Sbjct: 110125 agctcccaagcagtgggaggagcccaggg--ctctgaccgcgtgcctgttgaagaatgag 110182 Query: 241 ccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaa 300 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 110183 ccggcgactcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaa 110237 Query: 301 agcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 360 |||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 110238 agcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatcca 110297 Query: 361 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 420 ||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||| Sbjct: 110298 tgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaa 110357 Query: 421 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110358 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 110417 Query: 481 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110418 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 110477 Query: 541 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 586 |||||||| ||| ||||||||||||||||||||||||||||||||| Sbjct: 110478 gtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatac 110523
>emb|AJ970307.1| Cucumis sativus chloroplast complete genome Length = 155293 Score = 902 bits (455), Expect = 0.0 Identities = 554/585 (94%), Gaps = 9/585 (1%) Strand = Plus / Plus Query: 2 aagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 61 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106360 aagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 106419 Query: 62 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 121 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 106420 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagtgaagtagtacc 106479 Query: 122 gtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctg 181 ||||||||| ||||||||||||||||| ||| ||||||||||||| ||||||||| Sbjct: 106480 gtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccgta--- 106536 Query: 182 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 241 |||| ||||||||||||||| || || |||||||||||||||||||||||||||||| Sbjct: 106537 agcttccaagcagtgggaggagacgagga-ctctgaccgcgtgcctgttgaagaatgagc 106595 Query: 242 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 301 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 106596 cggcgactcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaa 106650 Query: 302 gcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 361 ||||||||| || |||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 106651 gcgagtcttcatggggcaattgtcactgcttatggacccgaacctgggtgatctatccat 106710 Query: 362 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 421 |||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||| Sbjct: 106711 gaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaat 106770 Query: 422 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106771 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 106830 Query: 482 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106831 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 106890 Query: 542 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 586 ||||||| ||| ||||||||||||||||||||||||||||||||| Sbjct: 106891 tgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatac 106935 Score = 866 bits (437), Expect = 0.0 Identities = 553/587 (94%), Gaps = 11/587 (1%) Strand = Plus / Minus Query: 2 aagcatcactagcttatgctc-tgacccgagtagcatggggcacgtggaatcccgtgtga 60 |||||||||||||||| || | |||||||||||||||||||||||||||||||||||||| Sbjct: 135548 aagcatcactagcttacgcccctgacccgagtagcatggggcacgtggaatcccgtgtga 135489 Query: 61 atcagc-aaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagta 119 |||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 135488 atcagccaaggaccaccttgcaaggctaaatactcctgggtgaccgatagtgaagtagta 135429 Query: 120 ccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgc 179 ||||||||||| ||||||||||||||||| ||| ||||||||||||| ||||||||| Sbjct: 135428 ccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccgta- 135370 Query: 180 tgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatga 239 |||| ||||||||||||||| || || |||||||||||||||||||||||||||| Sbjct: 135369 --agcttccaagcagtgggaggagacgagga-ctctgaccgcgtgcctgttgaagaatga 135313 Query: 240 gccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcga 299 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 135312 gccggcgactcataggcagtggcttggttaagggaac-----ccaccggagccgtagcga 135258 Query: 300 aagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcc 359 ||||||||||| || |||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 135257 aagcgagtcttcatggggcaattgtcactgcttatggacccgaacctgggtgatctatcc 135198 Query: 360 atgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaaga 419 |||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||| Sbjct: 135197 atgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaaga 135138 Query: 420 atcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttc 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135137 atcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttc 135078 Query: 480 tccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttc 539 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135077 tccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttc 135018 Query: 540 ggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 586 ||||||||| ||| ||||||||||||||||||||||||||||||||| Sbjct: 135017 ggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatac 134971
>gb|AF355762.1| Ceriops tagal 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2873 Score = 902 bits (455), Expect = 0.0 Identities = 554/585 (94%), Gaps = 9/585 (1%) Strand = Plus / Plus Query: 2 aagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 61 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 363 aagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 422 Query: 62 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 423 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 482 Query: 122 gtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctg 181 ||||||||| ||||||||||||||||| ||| ||||||||||||| ||||||||| Sbjct: 483 gtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccgta--- 539 Query: 182 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 241 |||||||||||||||||||| | | | |||||||||||||||||||||||||||||| Sbjct: 540 agctcccaagcagtgggaggagcccgggg-ctctgaccgcgtgcctgttgaagaatgagc 598 Query: 242 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 301 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 599 cggcgactcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaa 653 Query: 302 gcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 361 ||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 654 gcgagtcttcgtagggcaattgtcactgcttatggacccgaacctgggtgatctatccat 713 Query: 362 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 421 |||||||||| ||||||| |||||||||| ||||||||||||||||||||||||||||| Sbjct: 714 gaccaggatggagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaat 773 Query: 422 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 774 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 833 Query: 482 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 834 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 893 Query: 542 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 586 ||||||| ||| ||||||||||||||||||||||||||||||||| Sbjct: 894 tgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatac 938
>gb|DQ119058.1| Cucumis sativus cultivar Baekmibaekdadagi plastid, complete genome Length = 155527 Score = 902 bits (455), Expect = 0.0 Identities = 554/585 (94%), Gaps = 9/585 (1%) Strand = Plus / Minus Query: 2 aagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 61 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135825 aagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 135766 Query: 62 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 121 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 135765 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagtgaagtagtacc 135706 Query: 122 gtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctg 181 ||||||||| ||||||||||||||||| ||| ||||||||||||| ||||||||| Sbjct: 135705 gtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccgta--- 135649 Query: 182 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 241 |||| ||||||||||||||| || || |||||||||||||||||||||||||||||| Sbjct: 135648 agcttccaagcagtgggaggagacgagga-ctctgaccgcgtgcctgttgaagaatgagc 135590 Query: 242 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 301 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 135589 cggcgactcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaa 135535 Query: 302 gcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 361 ||||||||| || |||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 135534 gcgagtcttcatggggcaattgtcactgcttatggacccgaacctgggtgatctatccat 135475 Query: 362 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 421 |||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||| Sbjct: 135474 gaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaat 135415 Query: 422 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135414 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 135355 Query: 482 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135354 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 135295 Query: 542 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 586 ||||||| ||| ||||||||||||||||||||||||||||||||| Sbjct: 135294 tgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatac 135250 Score = 902 bits (455), Expect = 0.0 Identities = 554/585 (94%), Gaps = 9/585 (1%) Strand = Plus / Plus Query: 2 aagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 61 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106582 aagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 106641 Query: 62 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 121 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 106642 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagtgaagtagtacc 106701 Query: 122 gtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctg 181 ||||||||| ||||||||||||||||| ||| ||||||||||||| ||||||||| Sbjct: 106702 gtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccgta--- 106758 Query: 182 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 241 |||| ||||||||||||||| || || |||||||||||||||||||||||||||||| Sbjct: 106759 agcttccaagcagtgggaggagacgagga-ctctgaccgcgtgcctgttgaagaatgagc 106817 Query: 242 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 301 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 106818 cggcgactcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaa 106872 Query: 302 gcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 361 ||||||||| || |||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 106873 gcgagtcttcatggggcaattgtcactgcttatggacccgaacctgggtgatctatccat 106932 Query: 362 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 421 |||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||| Sbjct: 106933 gaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaat 106992 Query: 422 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106993 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 107052 Query: 482 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107053 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 107112 Query: 542 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 586 ||||||| ||| ||||||||||||||||||||||||||||||||| Sbjct: 107113 tgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatac 107157
>gb|J01446.1|TOBCPRG23 Tobacco chloroplast 23S and 4.5S rRNA genes Length = 3166 Score = 892 bits (450), Expect = 0.0 Identities = 553/585 (94%), Gaps = 13/585 (2%) Strand = Plus / Plus Query: 2 aagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 456 aagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 515 Query: 62 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 121 || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 516 tcgacaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 575 Query: 122 gtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctg 181 ||||||||| ||||||||||||||| | ||| ||||||||||||| ||||||||| Sbjct: 576 gtgagggaagggtgaaaagaacccc-atcggggagtgaaatagaacatgaaaccgta--- 631 Query: 182 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 241 |||||||||||||||||||| | | |||||||||||||||||||||||||||||| Sbjct: 632 agctcccaagcagtgggaggccaggg----ctctgaccgcgtgcctgttgaagaatgagc 687 Query: 242 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 301 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 688 cggcgactcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaa 742 Query: 302 gcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 361 ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 743 gcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccat 802 Query: 362 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 421 |||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||| Sbjct: 803 gaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaat 862 Query: 422 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 863 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 922 Query: 482 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 923 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 982 Query: 542 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 586 ||||||| ||| ||||||||||||||||||||||||||||||||| Sbjct: 983 tgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatac 1027
>gb|DQ317523.1| Glycine max cultivar PI 437654 chloroplast, complete genome Length = 152218 Score = 888 bits (448), Expect = 0.0 Identities = 554/586 (94%), Gaps = 10/586 (1%) Strand = Plus / Minus Query: 2 aagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 61 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131513 aagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 131454 Query: 62 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 121 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 131453 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagtgaagtagtacc 131394 Query: 122 gtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctg 181 ||||||||| ||||||||||||||||| ||| ||||||||||||| ||||||||| Sbjct: 131393 gtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccgta--- 131337 Query: 182 agctcccaagcagtgggagg-ggaaagtgatctctgaccgcgtgcctgttgaagaatgag 240 |||||||||||||||||||| || | || ||||||||||||||||||||||||||||| Sbjct: 131336 agctcccaagcagtgggaggaggctcggga-ctctgaccgcgtgcctgttgaagaatgag 131278 Query: 241 ccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaa 300 ||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 131277 ccggcgactcataggcagtggcttggttaagggaaa-----ccaccggagccgtagcgaa 131223 Query: 301 agcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 360 |||||||||| | ||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 131222 agcgagtcttcacagggcaattgtcactgcttatggacccgaacctgggtgatctatcca 131163 Query: 361 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 420 ||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||| Sbjct: 131162 tgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaa 131103 Query: 421 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131102 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 131043 Query: 481 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 540 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 131042 ccccgaaatgcgttgaggcgcagcagttgactagacatctaggggtaaagcactgtttcg 130983 Query: 541 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 586 |||||||| ||| ||||||||||||||||||||||||||||||||| Sbjct: 130982 gtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatac 130937 Score = 888 bits (448), Expect = 0.0 Identities = 554/586 (94%), Gaps = 10/586 (1%) Strand = Plus / Plus Query: 2 aagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 61 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103881 aagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 103940 Query: 62 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 121 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 103941 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagtgaagtagtacc 104000 Query: 122 gtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctg 181 ||||||||| ||||||||||||||||| ||| ||||||||||||| ||||||||| Sbjct: 104001 gtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccgta--- 104057 Query: 182 agctcccaagcagtgggagg-ggaaagtgatctctgaccgcgtgcctgttgaagaatgag 240 |||||||||||||||||||| || | || ||||||||||||||||||||||||||||| Sbjct: 104058 agctcccaagcagtgggaggaggctcggga-ctctgaccgcgtgcctgttgaagaatgag 104116 Query: 241 ccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaa 300 ||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 104117 ccggcgactcataggcagtggcttggttaagggaaa-----ccaccggagccgtagcgaa 104171 Query: 301 agcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 360 |||||||||| | ||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 104172 agcgagtcttcacagggcaattgtcactgcttatggacccgaacctgggtgatctatcca 104231 Query: 361 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 420 ||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||| Sbjct: 104232 tgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaa 104291 Query: 421 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104292 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 104351 Query: 481 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 540 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 104352 ccccgaaatgcgttgaggcgcagcagttgactagacatctaggggtaaagcactgtttcg 104411 Query: 541 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 586 |||||||| ||| ||||||||||||||||||||||||||||||||| Sbjct: 104412 gtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatac 104457
>gb|AF254866.1|AF254866 Amaranthus tricolor 23S ribosomal RNA, complete sequence; chloroplast gene for chloroplast product Length = 3322 Score = 884 bits (446), Expect = 0.0 Identities = 553/586 (94%), Gaps = 12/586 (2%) Strand = Plus / Plus Query: 2 aagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 61 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 851 aagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 910 Query: 62 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 121 ||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||| Sbjct: 911 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagccaaatagtacc 970 Query: 122 -gtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgct 180 ||||||||||||||||||||||||||| ||| ||||||||||||| ||||||||| Sbjct: 971 cgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccgta-- 1028 Query: 181 gagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgag 240 ||||| |||||||||||||| || || ||||||||||||||||||||||||||||| Sbjct: 1029 -agctctcaagcagtgggaggagacagg---ctctgaccgcgtgcctgttgaagaatgag 1084 Query: 241 ccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaa 300 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 1085 ccggcgactcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaa 1139 Query: 301 agcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 360 |||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 1140 agcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatcca 1199 Query: 361 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 420 ||||||||||||||||||| |||||||||| |||||||||||||||||||||||||| Sbjct: 1200 tgaccaggatgaagcttgggtgaaactaagtgagggtccgaaccgactgatgttgaagaa 1259 Query: 421 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1260 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 1319 Query: 481 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1320 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 1379 Query: 541 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 586 |||||||| ||| ||||||||||||||||||||||||||||||||| Sbjct: 1380 gtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatac 1425
>gb|AF355766.1| Amaranthus hypochondriacus 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2899 Score = 882 bits (445), Expect = 0.0 Identities = 551/585 (94%), Gaps = 11/585 (1%) Strand = Plus / Plus Query: 2 aagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 61 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 363 aagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 422 Query: 62 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 121 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 423 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtaatacc 482 Query: 122 gtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctg 181 ||||||||| ||||||||||||||||| ||| ||||||||| ||| ||||||||| Sbjct: 483 gtgagggaagggtgaaaagaacccccatcggggagtgaaataaaacatgaaaccgta--- 539 Query: 182 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 241 ||||| |||||||||||||| || || |||||| ||||||||||||||| ||||||| Sbjct: 540 agctctcaagcagtgggaggagacagg---ctctgaacgcgtgcctgttgaaaaatgagc 596 Query: 242 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 301 |||||||||||| |||||||||||||||||||||| |||||||||||||||||||| Sbjct: 597 cggcgactcatacgcagtggcttggttaagggaac-----ccaccggagccgtagcgaaa 651 Query: 302 gcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 361 ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 652 gcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccat 711 Query: 362 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 421 |||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||| Sbjct: 712 gaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaat 771 Query: 422 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 772 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 831 Query: 482 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 832 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 891 Query: 542 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 586 ||||||| ||| ||||||||||||||||||||||||||||||||| Sbjct: 892 tgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatac 936
>emb|X04465.1|CHMPXX Marchantia polymorpha chloroplast genome DNA Length = 121024 Score = 880 bits (444), Expect = 0.0 Identities = 552/586 (94%), Gaps = 9/586 (1%) Strand = Plus / Minus Query: 2 aagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 61 ||||| |||||||||| ||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 115855 aagcagcactagcttaggctctaacccgagtagcatggggcacgtggaatcccgtgtgaa 115796 Query: 62 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 121 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 115795 tcagcaaggaccaccttgtaaggctaaatactcctgggtgaccgatagcgaagtagtacc 115736 Query: 122 gtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctg 181 ||||||||||||||||||||||||||| ||| ||||||||||||| ||||||||| Sbjct: 115735 gtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccgta--- 115679 Query: 182 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 241 |||||||||||||||||||| ||| |||||||||||||||||||||||||||||||| Sbjct: 115678 agctcccaagcagtgggaggagaattgaatctctgaccgcgtgcctgttgaagaatgagc 115619 Query: 242 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 301 |||||||| |||||||||||| ||||||||||| | |||||||||||||||||||| Sbjct: 115618 cggcgacttataggcagtggcctggttaagggagc-----ccaccggagccgtagcgaaa 115564 Query: 302 gcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 361 ||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 115563 gcgagtcttcttagggcaattgtcactgcttatggacccgaacctgggtgatctatccat 115504 Query: 362 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 421 |||||||||||||||||| |||||||||| ||||||||||||||||||||||||| ||| Sbjct: 115503 gaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaaaaat 115444 Query: 422 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 115443 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 115384 Query: 482 cccgaaatgcgttgaggcgcagcagttgactggac-atctaggggtaaagcactgtttcg 540 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 115383 cccgaaatgcgttgaggcgcagcagttgactggactatctaggggtaaagcactgtttcg 115324 Query: 541 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 586 |||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 115323 gtgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatac 115278 Score = 880 bits (444), Expect = 0.0 Identities = 552/586 (94%), Gaps = 9/586 (1%) Strand = Plus / Plus Query: 2 aagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 61 ||||| |||||||||| ||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 86265 aagcagcactagcttaggctctaacccgagtagcatggggcacgtggaatcccgtgtgaa 86324 Query: 62 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 121 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 86325 tcagcaaggaccaccttgtaaggctaaatactcctgggtgaccgatagcgaagtagtacc 86384 Query: 122 gtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctg 181 ||||||||||||||||||||||||||| ||| ||||||||||||| ||||||||| Sbjct: 86385 gtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccgta--- 86441 Query: 182 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 241 |||||||||||||||||||| ||| |||||||||||||||||||||||||||||||| Sbjct: 86442 agctcccaagcagtgggaggagaattgaatctctgaccgcgtgcctgttgaagaatgagc 86501 Query: 242 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 301 |||||||| |||||||||||| ||||||||||| | |||||||||||||||||||| Sbjct: 86502 cggcgacttataggcagtggcctggttaagggagc-----ccaccggagccgtagcgaaa 86556 Query: 302 gcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 361 ||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 86557 gcgagtcttcttagggcaattgtcactgcttatggacccgaacctgggtgatctatccat 86616 Query: 362 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 421 |||||||||||||||||| |||||||||| ||||||||||||||||||||||||| ||| Sbjct: 86617 gaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaaaaat 86676 Query: 422 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 86677 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 86736 Query: 482 cccgaaatgcgttgaggcgcagcagttgactggac-atctaggggtaaagcactgtttcg 540 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 86737 cccgaaatgcgttgaggcgcagcagttgactggactatctaggggtaaagcactgtttcg 86796 Query: 541 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 586 |||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 86797 gtgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatac 86842
>gb|AF393587.1| Climacium dendroides large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3020 Score = 880 bits (444), Expect = 0.0 Identities = 552/586 (94%), Gaps = 9/586 (1%) Strand = Plus / Plus Query: 2 aagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 61 |||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 356 aagcatcactagtttatgctctaacccgagtagcatggggcacgtggaatcccgtgtgaa 415 Query: 62 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 121 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 416 tcagcaaggaccaccttgtaaggctaaatactcctgggtgaccgatagcgaagtagtacc 475 Query: 122 gtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctg 181 ||||||||||||||||||||||||||| ||| ||||||||||||| ||||||||| Sbjct: 476 gtgagggaaaggtgaaaagaacccccataggggagtgaaatagaacatgaaaccgta--- 532 Query: 182 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 241 |||||||||||||||||||| ||| |||||||||||||||||||||||||||||||| Sbjct: 533 agctcccaagcagtgggaggagaatcgaatctctgaccgcgtgcctgttgaagaatgagc 592 Query: 242 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 301 |||||||| ||||| |||||| ||||||||||||| |||||||||||||||||||| Sbjct: 593 cggcgacttataggtagtggcctggttaagggaac-----ccaccggagccgtagcgaaa 647 Query: 302 gcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 361 ||||||||| |||||| ||||||||| |||||||||||||||||||||||||||||||| Sbjct: 648 gcgagtcttcctagggcaattgtcactacttatggacccgaacctgggtgatctatccat 707 Query: 362 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 421 |||||||||||||||||| |||||||||| ||||||||||||||||||||||||| ||| Sbjct: 708 gaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaaaaat 767 Query: 422 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 768 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 827 Query: 482 cccgaaatgcgttgaggcgcagcagttgactggac-atctaggggtaaagcactgtttcg 540 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 828 cccgaaatgcgttgaggcgcagcagttgactggactatctaggggtaaagcactgtttcg 887 Query: 541 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 586 |||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 888 gtgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatac 933
>gb|AC151668.38| Medicago truncatula clone mth2-6e22, complete sequence Length = 110949 Score = 872 bits (440), Expect = 0.0 Identities = 550/585 (94%), Gaps = 10/585 (1%) Strand = Plus / Plus Query: 2 aagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4586 aagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 4645 Query: 62 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 121 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 4646 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagtgaagtagtacc 4705 Query: 122 gtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctg 181 ||||||||||||||||||||||||| ||| ||||||||||||| ||||||||| Sbjct: 4706 gtgagggaaaggtgaaaagaacccctgtcggggagtgaaatagaacatgaaaccgta--- 4762 Query: 182 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 241 |||||||||||||||||||| | | | |||||||||||||||||||||||||||||| Sbjct: 4763 agctcccaagcagtgggaggagctgggg--ctctgaccgcgtgcctgttgaagaatgagc 4820 Query: 242 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 301 |||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 4821 cggcgactcataggcagtggcttggttaagggaaa-----ccaccggagccgtagcgaaa 4875 Query: 302 gcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 361 ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 4876 gcgagtcttcatagggctattgtcactgcttatggacccgaacctgggtgatctatccat 4935 Query: 362 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 421 |||||||||||||||| | |||||||||| ||||||||||||||||||||||||| ||| Sbjct: 4936 gaccaggatgaagcttaggtgaaactaagtggaggtccgaaccgactgatgttgaaaaat 4995 Query: 422 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 481 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 4996 cagcggatgagttgtggttagcggtgaaatgccactcgaacccagagctagctggttctc 5055 Query: 482 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5056 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 5115 Query: 542 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 586 |||||| ||| ||||||||||||||||||||||||||||||||| Sbjct: 5116 cgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatac 5160
>gb|AY228468.1| Pinus Koraiensis chloroplast, complete genome Length = 116866 Score = 872 bits (440), Expect = 0.0 Identities = 551/586 (94%), Gaps = 9/586 (1%) Strand = Plus / Plus Query: 2 aagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 61 |||||||| | ||||| ||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 86619 aagcatcattggcttacgctctaacccgagtagcatggggcacgtggaatcccgtgtgaa 86678 Query: 62 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 86679 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 86738 Query: 122 gtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctg 181 ||||||||||||||||||||||||||| ||| ||||||||||||| ||||||||| Sbjct: 86739 gtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccgta--- 86795 Query: 182 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 241 |||||||||||||||||||| || ||||||||||||||||||||||||||||||||| Sbjct: 86796 agctcccaagcagtgggaggaaaattagatctctgaccgcgtgcctgttgaagaatgagc 86855 Query: 242 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 301 |||||||| |||||||||||||||||||||||||| |||||||||||||||||| | Sbjct: 86856 cggcgacttataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaga 86910 Query: 302 gcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 361 ||||||||| || |||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 86911 gcgagtcttcatggggcaattgtcactgcttatggacccgaacctgggtgatctatccat 86970 Query: 362 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 421 |||||||||||||||||| |||||||||| ||||||||||||||||||||||||| ||| Sbjct: 86971 gaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaaaaat 87030 Query: 422 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 87031 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 87090 Query: 482 cccgaaatgcgttgaggcgcagcagttgactgga-catctaggggtaaagcactgtttcg 540 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 87091 cccgaaatgcgttgaggcgcagcagttgactggaccatctaggggtaaagcactgtttcg 87150 Query: 541 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 586 || ||||| ||| ||||||||||||||||||||||||||||||||| Sbjct: 87151 gtacgggccgcgagagcggtaccaaatcgaggcaaactctgaatac 87196
>gb|AC093544.8| Medicago truncatula chloroplast, complete genome, complete sequence Length = 124033 Score = 872 bits (440), Expect = 0.0 Identities = 550/585 (94%), Gaps = 10/585 (1%) Strand = Plus / Minus Query: 2 aagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 23339 aagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 23280 Query: 62 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 121 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 23279 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagtgaagtagtacc 23220 Query: 122 gtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctg 181 ||||||||||||||||||||||||| ||| ||||||||||||| ||||||||| Sbjct: 23219 gtgagggaaaggtgaaaagaacccctgtcggggagtgaaatagaacatgaaaccgta--- 23163 Query: 182 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 241 |||||||||||||||||||| | | | |||||||||||||||||||||||||||||| Sbjct: 23162 agctcccaagcagtgggaggagctgggg--ctctgaccgcgtgcctgttgaagaatgagc 23105 Query: 242 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 301 |||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 23104 cggcgactcataggcagtggcttggttaagggaaa-----ccaccggagccgtagcgaaa 23050 Query: 302 gcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 361 ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 23049 gcgagtcttcatagggctattgtcactgcttatggacccgaacctgggtgatctatccat 22990 Query: 362 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 421 |||||||||||||||| | |||||||||| ||||||||||||||||||||||||| ||| Sbjct: 22989 gaccaggatgaagcttaggtgaaactaagtggaggtccgaaccgactgatgttgaaaaat 22930 Query: 422 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 481 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 22929 cagcggatgagttgtggttagcggtgaaatgccactcgaacccagagctagctggttctc 22870 Query: 482 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 22869 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 22810 Query: 542 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 586 |||||| ||| ||||||||||||||||||||||||||||||||| Sbjct: 22809 cgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatac 22765
>gb|AF393612.1| Sphagnum rubellum large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3033 Score = 872 bits (440), Expect = 0.0 Identities = 551/586 (94%), Gaps = 9/586 (1%) Strand = Plus / Plus Query: 2 aagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 61 |||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 356 aagcatcactagcttacgctctaacccgagtagcatggggcacgtggaatcccgtgtgaa 415 Query: 62 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 416 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 475 Query: 122 gtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctg 181 ||||||||||||||||||||||||||| ||| ||||||||||||| ||||||||| Sbjct: 476 gtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccgta--- 532 Query: 182 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 241 |||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||| Sbjct: 533 agctcccaagcagtgggaggagaatcggatctctgaccgcgtgcctgttgaagaatgagc 592 Query: 242 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 301 |||||||| ||||| |||||| |||||||||| || |||||||||||||||||||| Sbjct: 593 cggcgacttataggtagtggcctggttaaggggac-----ccaccggagccgtagcgaaa 647 Query: 302 gcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 361 ||||||||| | |||| ||||||||| |||||||||||||||||||||||||||||||| Sbjct: 648 gcgagtcttcctggggcaattgtcactacttatggacccgaacctgggtgatctatccat 707 Query: 362 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 421 ||||||||||||||| || |||||||||| ||||||||||||||||||||||||| ||| Sbjct: 708 gaccaggatgaagctcgggtgaaactaagtggaggtccgaaccgactgatgttgaaaaat 767 Query: 422 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 768 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 827 Query: 482 cccgaaatgcgttgaggcgcagcagttgactggac-atctaggggtaaagcactgtttcg 540 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 828 cccgaaatgcgttgaggcgcagcagttgactggactatctaggggtaaagcactgtttcg 887 Query: 541 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 586 |||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 888 gtgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatac 933
>gb|AF393606.1| Pellia neesiana large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2989 Score = 872 bits (440), Expect = 0.0 Identities = 542/574 (94%), Gaps = 9/574 (1%) Strand = Plus / Plus Query: 14 cttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacc 73 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 372 cttatgctctaacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacc 431 Query: 74 accttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaagg 133 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 432 accttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaagg 491 Query: 134 tgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagca 193 ||||||||||||||| ||| ||||||||||||| ||||||||| |||||||||||| Sbjct: 492 tgaaaagaacccccatcggggagtgaaatagaacatgaaaccgta---agctcccaagca 548 Query: 194 gtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcata 253 |||||||| ||| ||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 549 gtgggaggagaatcggatctctgaccgcgtgcctgttgaagaatgagccggcgacttata 608 Query: 254 ggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaat 313 ||||||||| ||||||||||||| |||||||||||||||||||||| |||||| | Sbjct: 609 ggcagtggcctggttaagggaac-----ccaccggagccgtagcgaaagcaagtcttcct 663 Query: 314 agggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 373 |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 664 ggggcaattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 723 Query: 374 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 433 |||||| |||||||||| ||||||||||||||||||||||||| ||||||||||||||| Sbjct: 724 gcttgggtgaaactaagtggaggtccgaaccgactgatgttgaaaaatcagcggatgagt 783 Query: 434 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 493 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 784 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 843 Query: 494 tgaggcgcagcagttgactggac-atctaggggtaaagcactgtttcggtgcgggctgcg 552 ||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||| Sbjct: 844 tgaggcgcagcagttgactagactatctaggggtaaagcactgtttcggtgcgggctgcg 903 Query: 553 cgagcggtaccaaatcgaggcaaactctgaatac 586 ||||||||||||||||||||||||||||||||| Sbjct: 904 agagcggtaccaaatcgaggcaaactctgaatac 937
>dbj|D17510.1|PINCPTRPG Pinus thunbergii chloroplast DNA, complete sequence Length = 119707 Score = 864 bits (436), Expect = 0.0 Identities = 550/586 (93%), Gaps = 9/586 (1%) Strand = Plus / Plus Query: 2 aagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 61 |||||||| | ||||| ||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 88705 aagcatcattggcttacgctctaacccgagtagcatggggcacgtggaatcccgtgtgaa 88764 Query: 62 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 88765 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 88824 Query: 122 gtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctg 181 ||||||||||||||||||||||||||| ||| ||||||||||||| ||||||||| Sbjct: 88825 gtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccgta--- 88881 Query: 182 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 241 |||||||||||||||||||| || ||||||||||||||||||||||||||||||||| Sbjct: 88882 agctcccaagcagtgggaggaaaattagatctctgaccgcgtgcctgttgaagaatgagc 88941 Query: 242 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 301 |||||||| |||||||||||||||||||||||||| |||||||||||||||||| | Sbjct: 88942 cggcgacttataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaga 88996 Query: 302 gcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 361 ||||||||| || |||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 88997 gcgagtcttcatggggcaattgtcactgcttatggacccgaacctgggtgatctatccat 89056 Query: 362 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 421 |||||||||||||||||| |||||||||| ||||||||||||||||||||||||| ||| Sbjct: 89057 gaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaaaaat 89116 Query: 422 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 89117 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 89176 Query: 482 cccgaaatgcgttgaggcgcagcagttgactgga-catctaggggtaaagcactgtttcg 540 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 89177 cccgaaatgcgttgaggcgcagcagttgactggaccatctaggggtaaagcactgtttcg 89236 Query: 541 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 586 || ||||| || ||||||||||||||||||||||||||||||||| Sbjct: 89237 gtacgggccacgagagcggtaccaaatcgaggcaaactctgaatac 89282
>gb|AY506529.1| Zea mays strain NB mitochondrion, complete genome Length = 569630 Score = 858 bits (433), Expect = 0.0 Identities = 478/494 (96%), Gaps = 13/494 (2%) Strand = Plus / Minus Query: 2 aagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 61 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75345 aagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 75286 Query: 62 tcagcaagga-----ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 116 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75285 tcagcaaggaaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 75226 Query: 117 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 176 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75225 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 75166 Query: 177 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 236 |||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 75165 tgctgagctccc--------ggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 75114 Query: 237 tgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtag 296 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 75113 tgagccggcgactcataggcagtggcttggttaagggaatggaacccaccggagccgtag 75054 Query: 297 cgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatcta 356 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75053 cgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatcta 74994 Query: 357 tccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttga 416 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 74993 tccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttga 74934 Query: 417 agaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctgg 476 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 74933 agaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctgg 74874 Query: 477 ttctccccgaaatg 490 |||||||||||||| Sbjct: 74873 ttctccccgaaatg 74860 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 100 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 146 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 400814 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 400860
>gb|DQ490952.1| Zea mays subsp. mays genotype male-fertile NA mitochondrion, complete genome Length = 701046 Score = 858 bits (433), Expect = 0.0 Identities = 478/494 (96%), Gaps = 13/494 (2%) Strand = Plus / Plus Query: 2 aagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 61 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 382193 aagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 382252 Query: 62 tcagcaagga-----ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 116 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 382253 tcagcaaggaaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 382312 Query: 117 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 176 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 382313 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 382372 Query: 177 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 236 |||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 382373 tgctgagctccc--------ggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 382424 Query: 237 tgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtag 296 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 382425 tgagccggcgactcataggcagtggcttggttaagggaatggaacccaccggagccgtag 382484 Query: 297 cgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatcta 356 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 382485 cgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatcta 382544 Query: 357 tccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttga 416 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 382545 tccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttga 382604 Query: 417 agaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctgg 476 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 382605 agaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctgg 382664 Query: 477 ttctccccgaaatg 490 |||||||||||||| Sbjct: 382665 ttctccccgaaatg 382678 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Minus Query: 100 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 146 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 283605 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 283559 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Minus Query: 100 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 146 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 154913 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 154867
>gb|DQ490951.1| Zea mays subsp. mays genotype CMS-S mitochondrion, complete genome Length = 569553 Score = 858 bits (433), Expect = 0.0 Identities = 478/494 (96%), Gaps = 13/494 (2%) Strand = Plus / Minus Query: 2 aagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 61 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113436 aagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 113377 Query: 62 tcagcaagga-----ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 116 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113376 tcagcaaggaaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 113317 Query: 117 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 176 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113316 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 113257 Query: 177 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 236 |||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 113256 tgctgagctccc--------ggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 113205 Query: 237 tgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtag 296 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 113204 tgagccggcgactcataggcagtggcttggttaagggaatggaacccaccggagccgtag 113145 Query: 297 cgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatcta 356 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113144 cgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatcta 113085 Query: 357 tccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttga 416 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113084 tccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttga 113025 Query: 417 agaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctgg 476 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113024 agaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctgg 112965 Query: 477 ttctccccgaaatg 490 |||||||||||||| Sbjct: 112964 ttctccccgaaatg 112951 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 100 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 146 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 293448 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 293494
>gb|DQ490953.1| Zea mays subsp. mays genotype CMS-T mitochondrion, complete genome Length = 535825 Score = 858 bits (433), Expect = 0.0 Identities = 481/498 (96%), Gaps = 13/498 (2%) Strand = Plus / Minus Query: 2 aagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 61 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 368118 aagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 368059 Query: 62 tcagcaagga-----ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 116 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 368058 tcagcaaggaaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 367999 Query: 117 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 176 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 367998 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 367939 Query: 177 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 236 |||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 367938 tgctgagctccc--------ggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 367887 Query: 237 tgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtag 296 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 367886 tgagccggcgactcataggcagtggcttggttaagggaatggaacccaccggagccgtag 367827 Query: 297 cgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatcta 356 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 367826 cgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatcta 367767 Query: 357 tccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttga 416 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 367766 tccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttga 367707 Query: 417 agaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctgg 476 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 367706 agaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctgg 367647 Query: 477 ttctccccgaaatgcgtt 494 ||||||||||||| |||| Sbjct: 367646 ttctccccgaaattcgtt 367629 Score = 858 bits (433), Expect = 0.0 Identities = 481/498 (96%), Gaps = 13/498 (2%) Strand = Plus / Minus Query: 2 aagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 61 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184723 aagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 184664 Query: 62 tcagcaagga-----ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 116 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184663 tcagcaaggaaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 184604 Query: 117 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 176 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184603 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 184544 Query: 177 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 236 |||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 184543 tgctgagctccc--------ggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 184492 Query: 237 tgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtag 296 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 184491 tgagccggcgactcataggcagtggcttggttaagggaatggaacccaccggagccgtag 184432 Query: 297 cgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatcta 356 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184431 cgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatcta 184372 Query: 357 tccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttga 416 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184371 tccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttga 184312 Query: 417 agaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctgg 476 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184311 agaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctgg 184252 Query: 477 ttctccccgaaatgcgtt 494 ||||||||||||| |||| Sbjct: 184251 ttctccccgaaattcgtt 184234 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 100 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 146 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 266283 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 266329
>gb|M81884.1|EPFCPCG Epifagus virginiana chloroplast, complete genome Length = 70028 Score = 848 bits (428), Expect = 0.0 Identities = 547/585 (93%), Gaps = 10/585 (1%) Strand = Plus / Minus Query: 2 aagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 61 |||||||| |||||| ||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 52330 aagcatcattagcttgtgctctgacccgagtagcatgggacacgtggaatcccgtgtgaa 52271 Query: 62 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 121 ||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||| Sbjct: 52270 tcagcaaggaccaccttgcaaggctaaatactcctgggtaaccgatagttaagtagtacc 52211 Query: 122 gtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctg 181 ||||||||| ||||||||||||||||| |||| ||||||||||||| ||||||||| Sbjct: 52210 gtgagggaagggtgaaaagaacccccattggggagtgaaatagaacatgaaaccgta--- 52154 Query: 182 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 241 |||||||||||||||||||| | || | |||||||||||||||||||||||||||||| Sbjct: 52153 agctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagc 52096 Query: 242 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 301 ||||||||||||||||| ||||||||||||||||| ||||||||||| |||||||| Sbjct: 52095 cggcgactcataggcagcggcttggttaagggaac-----ccaccggagccatagcgaaa 52041 Query: 302 gcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 361 |||||| || ||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 52040 gcgagtattcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccat 51981 Query: 362 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 421 |||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||| Sbjct: 51980 gaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaat 51921 Query: 422 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 51920 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 51861 Query: 482 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 51860 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcag 51801 Query: 542 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 586 ||||||| | | ||||||||||||||||| ||||||||||||||| Sbjct: 51800 tgcgggccgtgagagcggtaccaaatcgaagcaaactctgaatac 51756 Score = 848 bits (428), Expect = 0.0 Identities = 547/585 (93%), Gaps = 10/585 (1%) Strand = Plus / Plus Query: 2 aagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 61 |||||||| |||||| ||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 37498 aagcatcattagcttgtgctctgacccgagtagcatgggacacgtggaatcccgtgtgaa 37557 Query: 62 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 121 ||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||| Sbjct: 37558 tcagcaaggaccaccttgcaaggctaaatactcctgggtaaccgatagttaagtagtacc 37617 Query: 122 gtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctg 181 ||||||||| ||||||||||||||||| |||| ||||||||||||| ||||||||| Sbjct: 37618 gtgagggaagggtgaaaagaacccccattggggagtgaaatagaacatgaaaccgta--- 37674 Query: 182 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 241 |||||||||||||||||||| | || | |||||||||||||||||||||||||||||| Sbjct: 37675 agctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagc 37732 Query: 242 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 301 ||||||||||||||||| ||||||||||||||||| ||||||||||| |||||||| Sbjct: 37733 cggcgactcataggcagcggcttggttaagggaac-----ccaccggagccatagcgaaa 37787 Query: 302 gcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 361 |||||| || ||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 37788 gcgagtattcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccat 37847 Query: 362 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 421 |||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||| Sbjct: 37848 gaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaat 37907 Query: 422 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 37908 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 37967 Query: 482 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 37968 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcag 38027 Query: 542 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 586 ||||||| | | ||||||||||||||||| ||||||||||||||| Sbjct: 38028 tgcgggccgtgagagcggtaccaaatcgaagcaaactctgaatac 38072
>emb|X62099.1|CHEVIARRN E.virginiana plastid ribosomal RNA operon, trnI and trnA pseudogenes Length = 7395 Score = 848 bits (428), Expect = 0.0 Identities = 547/585 (93%), Gaps = 10/585 (1%) Strand = Plus / Plus Query: 2 aagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 61 |||||||| |||||| ||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 4426 aagcatcattagcttgtgctctgacccgagtagcatgggacacgtggaatcccgtgtgaa 4485 Query: 62 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 121 ||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||| Sbjct: 4486 tcagcaaggaccaccttgcaaggctaaatactcctgggtaaccgatagttaagtagtacc 4545 Query: 122 gtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctg 181 ||||||||| ||||||||||||||||| |||| ||||||||||||| ||||||||| Sbjct: 4546 gtgagggaagggtgaaaagaacccccattggggagtgaaatagaacatgaaaccgta--- 4602 Query: 182 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 241 |||||||||||||||||||| | || | |||||||||||||||||||||||||||||| Sbjct: 4603 agctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagc 4660 Query: 242 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 301 ||||||||||||||||| ||||||||||||||||| ||||||||||| |||||||| Sbjct: 4661 cggcgactcataggcagcggcttggttaagggaac-----ccaccggagccatagcgaaa 4715 Query: 302 gcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 361 |||||| || ||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 4716 gcgagtattcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccat 4775 Query: 362 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 421 |||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||| Sbjct: 4776 gaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaat 4835 Query: 422 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4836 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 4895 Query: 482 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 4896 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcag 4955 Query: 542 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 586 ||||||| | | ||||||||||||||||| ||||||||||||||| Sbjct: 4956 tgcgggccgtgagagcggtaccaaatcgaagcaaactctgaatac 5000
>gb|AF393576.1| Anthoceros punctatus small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 8235 Score = 842 bits (425), Expect = 0.0 Identities = 530/563 (94%), Gaps = 9/563 (1%) Strand = Plus / Plus Query: 25 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 84 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4268 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 4327 Query: 85 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 144 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4328 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 4387 Query: 145 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 204 |||| ||| ||||||||||||| ||||| ||| |||| |||||||||| |||| || Sbjct: 4388 cccatcggggagtgaaatagaacatgaaatcgta---agcttccaagcagtgagaggaga 4444 Query: 205 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 264 | ||||||||||||||||||||||||||||||||||||||||| |||||||||||| | Sbjct: 4445 atcggatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcct 4504 Query: 265 ggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgt 324 ||||||||||| |||||||||||||||||||||||||||| |||||| ||||| Sbjct: 4505 ggttaagggaatt-----caccggagccgtagcgaaagcgagtcttcctagggcaattgt 4559 Query: 325 cactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaa 384 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 4560 cactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaa 4619 Query: 385 actaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggg 444 |||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 4620 actaagtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggg 4679 Query: 445 gtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagc 504 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4680 gtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagc 4739 Query: 505 agttgactggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtacc 563 |||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 4740 agttgactggactatctaggggtaaagcactgtttcggtgcgggctgcgagagcggtacc 4799 Query: 564 aaatcgaggcaaactctgaatac 586 ||||||||||||||||||||||| Sbjct: 4800 aaatcgaggcaaactctgaatac 4822
>gb|AF393577.1| Bazzania trilobata large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2945 Score = 842 bits (425), Expect = 0.0 Identities = 548/586 (93%), Gaps = 6/586 (1%) Strand = Plus / Plus Query: 2 aagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 61 |||||| || ||||| ||||| ||||||||| ||||||||||||||||||||||||||| Sbjct: 339 aagcattacaagcttgggctctaacccgagtaacatggggcacgtggaatcccgtgtgaa 398 Query: 62 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 399 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 458 Query: 122 gtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctg 181 ||||||||||||||||||||||||||| ||| ||||||||||||| ||||||||| Sbjct: 459 gtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccgta--- 515 Query: 182 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 241 |||| ||||||||||||||| ||| ||||||||||||||||||||||||||||||||| Sbjct: 516 agcttccaagcagtgggaggagaatcggatctctgaccgcgtgcctgttgaagaatgagc 575 Query: 242 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 301 |||||||| |||||||||||| |||||||||||| | | ||||||||||| |||||||| Sbjct: 576 cggcgacttataggcagtggcctggttaagggaaagaa--ccaccggagccatagcgaaa 633 Query: 302 gcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 361 ||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 634 gcgagtcttcccagggcaattgtcactgcttatggacccgaacctgggtgatctatccat 693 Query: 362 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 421 |||||||||||||||||| |||||||||| ||||||||||||||||||||||||| ||| Sbjct: 694 gaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaaaaat 753 Query: 422 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 754 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 813 Query: 482 cccgaaatgcgttgaggcgcagcagttgactggac-atctaggggtaaagcactgtttcg 540 ||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||| Sbjct: 814 cccgaaatgcgttgaggcgcaacagttgactggactatctaggggtaaagcactgtttcg 873 Query: 541 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 586 |||||||| ||| ||||||||||||||||||||||||||||||||| Sbjct: 874 gtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatac 919
>dbj|AB087478.1| Anthoceros formosae chloroplast 23S rRNA, complete sequence Length = 2819 Score = 842 bits (425), Expect = 0.0 Identities = 530/563 (94%), Gaps = 9/563 (1%) Strand = Plus / Plus Query: 25 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 84 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 378 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 437 Query: 85 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 144 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 438 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 497 Query: 145 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 204 |||| ||| ||||||||||||| ||||| ||| |||| |||||||||| |||| || Sbjct: 498 cccatcggggagtgaaatagaacatgaaatcgta---agcttccaagcagtgagaggaga 554 Query: 205 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 264 | ||||||||||||||||||||||||||||||||||||||||| |||||||||||| | Sbjct: 555 atcggatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcct 614 Query: 265 ggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgt 324 ||||||||||| |||||||||||||||||||||||||||| |||||| ||||| Sbjct: 615 ggttaagggaatt-----caccggagccgtagcgaaagcgagtcttcctagggcaattgt 669 Query: 325 cactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaa 384 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 670 cactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaa 729 Query: 385 actaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggg 444 |||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 730 actaagtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggg 789 Query: 445 gtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagc 504 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 790 gtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagc 849 Query: 505 agttgactggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtacc 563 |||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 850 agttgactggactatctaggggtaaagcactgtttcggtgcgggctgcgagagcggtacc 909 Query: 564 aaatcgaggcaaactctgaatac 586 ||||||||||||||||||||||| Sbjct: 910 aaatcgaggcaaactctgaatac 932
>dbj|AB086179.1| Anthoceros formosae chloroplast DNA, complete genome Length = 161162 Score = 842 bits (425), Expect = 0.0 Identities = 530/563 (94%), Gaps = 9/563 (1%) Strand = Plus / Minus Query: 25 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 84 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 150867 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 150808 Query: 85 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 144 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 150807 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 150748 Query: 145 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 204 |||| ||| ||||||||||||| ||||| ||| |||| |||||||||| |||| || Sbjct: 150747 cccatcggggagtgaaatagaacatgaaatcgta---agcttccaagcagtgagaggaga 150691 Query: 205 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 264 | ||||||||||||||||||||||||||||||||||||||||| |||||||||||| | Sbjct: 150690 atcggatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcct 150631 Query: 265 ggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgt 324 ||||||||||| |||||||||||||||||||||||||||| |||||| ||||| Sbjct: 150630 ggttaagggaatt-----caccggagccgtagcgaaagcgagtcttcctagggcaattgt 150576 Query: 325 cactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaa 384 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 150575 cactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaa 150516 Query: 385 actaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggg 444 |||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 150515 actaagtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggg 150456 Query: 445 gtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagc 504 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 150455 gtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagc 150396 Query: 505 agttgactggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtacc 563 |||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 150395 agttgactggactatctaggggtaaagcactgtttcggtgcgggctgcgagagcggtacc 150336 Query: 564 aaatcgaggcaaactctgaatac 586 ||||||||||||||||||||||| Sbjct: 150335 aaatcgaggcaaactctgaatac 150313 Score = 842 bits (425), Expect = 0.0 Identities = 530/563 (94%), Gaps = 9/563 (1%) Strand = Plus / Plus Query: 25 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 84 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117799 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 117858 Query: 85 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 144 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117859 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 117918 Query: 145 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 204 |||| ||| ||||||||||||| ||||| ||| |||| |||||||||| |||| || Sbjct: 117919 cccatcggggagtgaaatagaacatgaaatcgta---agcttccaagcagtgagaggaga 117975 Query: 205 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 264 | ||||||||||||||||||||||||||||||||||||||||| |||||||||||| | Sbjct: 117976 atcggatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcct 118035 Query: 265 ggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgt 324 ||||||||||| |||||||||||||||||||||||||||| |||||| ||||| Sbjct: 118036 ggttaagggaatt-----caccggagccgtagcgaaagcgagtcttcctagggcaattgt 118090 Query: 325 cactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaa 384 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 118091 cactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaa 118150 Query: 385 actaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggg 444 |||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 118151 actaagtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggg 118210 Query: 445 gtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagc 504 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118211 gtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagc 118270 Query: 505 agttgactggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtacc 563 |||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 118271 agttgactggactatctaggggtaaagcactgtttcggtgcgggctgcgagagcggtacc 118330 Query: 564 aaatcgaggcaaactctgaatac 586 ||||||||||||||||||||||| Sbjct: 118331 aaatcgaggcaaactctgaatac 118353
>dbj|AP005672.1| Physcomitrella patens subsp. patens chloroplast DNA, complete genome Length = 122890 Score = 842 bits (425), Expect = 0.0 Identities = 536/571 (93%), Gaps = 9/571 (1%) Strand = Plus / Minus Query: 17 atgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccacc 76 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117778 atgctctaacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccacc 117719 Query: 77 ttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtga 136 ||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 117718 ttgtaaggctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtga 117659 Query: 137 aaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtg 196 |||||||||||| ||| ||||||||||||| ||||||||| ||||||||||||||| Sbjct: 117658 aaagaacccccatcggggagtgaaatagaacatgaaaccgta---agctcccaagcagtg 117602 Query: 197 ggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggc 256 ||||| ||| |||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 117601 ggaggagaatcgaatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggt 117542 Query: 257 agtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagg 316 |||||| ||||||||||||| ||||||||||||||||||||||||||||| |||| Sbjct: 117541 agtggcctggttaagggaac-----ccaccggagccgtagcgaaagcgagtcttcctagg 117487 Query: 317 gcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagct 376 || ||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 117486 gcaattgtcactacttatggacccgaacctgggtgatctaaccatgaccaggatgaagct 117427 Query: 377 tggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgt 436 ||| |||||||||| ||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 117426 tgggtgaaactaagtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgt 117367 Query: 437 ggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttga 496 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117366 ggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttga 117307 Query: 497 ggcgcagcagttgactggac-atctaggggtaaagcactgtttcggtgcgggctgcgcga 555 |||||||||||||||||||| |||||||||||||||||||||||||||||||||||| || Sbjct: 117306 ggcgcagcagttgactggactatctaggggtaaagcactgtttcggtgcgggctgcgaga 117247 Query: 556 gcggtaccaaatcgaggcaaactctgaatac 586 ||||||||||||||||||||||||||||||| Sbjct: 117246 gcggtaccaaatcgaggcaaactctgaatac 117216 Score = 842 bits (425), Expect = 0.0 Identities = 536/571 (93%), Gaps = 9/571 (1%) Strand = Plus / Plus Query: 17 atgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccacc 76 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 90324 atgctctaacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccacc 90383 Query: 77 ttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtga 136 ||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 90384 ttgtaaggctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtga 90443 Query: 137 aaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtg 196 |||||||||||| ||| ||||||||||||| ||||||||| ||||||||||||||| Sbjct: 90444 aaagaacccccatcggggagtgaaatagaacatgaaaccgta---agctcccaagcagtg 90500 Query: 197 ggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggc 256 ||||| ||| |||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 90501 ggaggagaatcgaatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggt 90560 Query: 257 agtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagg 316 |||||| ||||||||||||| ||||||||||||||||||||||||||||| |||| Sbjct: 90561 agtggcctggttaagggaac-----ccaccggagccgtagcgaaagcgagtcttcctagg 90615 Query: 317 gcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagct 376 || ||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 90616 gcaattgtcactacttatggacccgaacctgggtgatctaaccatgaccaggatgaagct 90675 Query: 377 tggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgt 436 ||| |||||||||| ||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 90676 tgggtgaaactaagtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgt 90735 Query: 437 ggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttga 496 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 90736 ggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttga 90795 Query: 497 ggcgcagcagttgactggac-atctaggggtaaagcactgtttcggtgcgggctgcgcga 555 |||||||||||||||||||| |||||||||||||||||||||||||||||||||||| || Sbjct: 90796 ggcgcagcagttgactggactatctaggggtaaagcactgtttcggtgcgggctgcgaga 90855 Query: 556 gcggtaccaaatcgaggcaaactctgaatac 586 ||||||||||||||||||||||||||||||| Sbjct: 90856 gcggtaccaaatcgaggcaaactctgaatac 90886
>dbj|AB073981.1| Anthoceros formosae chloroplast gene for 23S ribosomal RNA, complete sequence Length = 3503 Score = 842 bits (425), Expect = 0.0 Identities = 530/563 (94%), Gaps = 9/563 (1%) Strand = Plus / Plus Query: 25 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 84 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 378 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 437 Query: 85 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 144 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 438 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 497 Query: 145 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 204 |||| ||| ||||||||||||| ||||| ||| |||| |||||||||| |||| || Sbjct: 498 cccatcggggagtgaaatagaacatgaaatcgta---agcttccaagcagtgagaggaga 554 Query: 205 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 264 | ||||||||||||||||||||||||||||||||||||||||| |||||||||||| | Sbjct: 555 atcggatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcct 614 Query: 265 ggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgt 324 ||||||||||| |||||||||||||||||||||||||||| |||||| ||||| Sbjct: 615 ggttaagggaatt-----caccggagccgtagcgaaagcgagtcttcctagggcaattgt 669 Query: 325 cactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaa 384 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 670 cactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaa 729 Query: 385 actaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggg 444 |||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 730 actaagtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggg 789 Query: 445 gtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagc 504 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 790 gtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagc 849 Query: 505 agttgactggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtacc 563 |||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 850 agttgactggactatctaggggtaaagcactgtttcggtgcgggctgcgagagcggtacc 909 Query: 564 aaatcgaggcaaactctgaatac 586 ||||||||||||||||||||||| Sbjct: 910 aaatcgaggcaaactctgaatac 932
>dbj|AP004638.1| Psilotum nudum chloroplast DNA, complete genome Length = 138829 Score = 833 bits (420), Expect = 0.0 Identities = 546/586 (93%), Gaps = 9/586 (1%) Strand = Plus / Minus Query: 2 aagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 61 |||||||||||||| | ||||| |||| |||||||||||||||||||||||||||||||| Sbjct: 128085 aagcatcactagctcacgctctaacccaagtagcatggggcacgtggaatcccgtgtgaa 128026 Query: 62 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 121 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 128025 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagcagtacc 127966 Query: 122 gtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctg 181 ||||||||| ||||||||||||||||| ||| ||||||||||||| ||||||||| Sbjct: 127965 gtgagggaagggtgaaaagaacccccataggggagtgaaatagaacatgaaaccgta--- 127909 Query: 182 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 241 |||||||||||||||||||| ||| ||||||||||||| |||||||||| |||||||| Sbjct: 127908 agctcccaagcagtgggaggagaattggatctctgaccgcatgcctgttgaggaatgagc 127849 Query: 242 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 301 ||||||||||||||||||||| ||||||||||||| |||||||||||||||||||| Sbjct: 127848 cggcgactcataggcagtggcctggttaagggaac-----ccaccggagccgtagcgaaa 127794 Query: 302 gcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 361 ||||||||| |||||| |||||||||||| ||||||||||||||||||||||||||||| Sbjct: 127793 gcgagtcttcctagggcaattgtcactgctcatggacccgaacctgggtgatctatccat 127734 Query: 362 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 421 |||||||||||||||||| | |||||||| ||||||||||||||||||||||||| ||| Sbjct: 127733 gaccaggatgaagcttgggtaaaactaagtggaggtccgaaccgactgatgttgaaaaat 127674 Query: 422 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127673 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 127614 Query: 482 cccgaaatgcgttgaggcgcagcagttgactggac-atctaggggtaaagcactgtttcg 540 |||||||||||||||||||||||||||||| |||| | |||||||||||||||||||||| Sbjct: 127613 cccgaaatgcgttgaggcgcagcagttgaccggactacctaggggtaaagcactgtttcg 127554 Query: 541 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 586 |||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 127553 gtgcgggctgcgaaagcggtaccaaatcgaggcaaactctgaatac 127508 Score = 833 bits (420), Expect = 0.0 Identities = 546/586 (93%), Gaps = 9/586 (1%) Strand = Plus / Plus Query: 2 aagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 61 |||||||||||||| | ||||| |||| |||||||||||||||||||||||||||||||| Sbjct: 95362 aagcatcactagctcacgctctaacccaagtagcatggggcacgtggaatcccgtgtgaa 95421 Query: 62 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 121 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 95422 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagcagtacc 95481 Query: 122 gtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctg 181 ||||||||| ||||||||||||||||| ||| ||||||||||||| ||||||||| Sbjct: 95482 gtgagggaagggtgaaaagaacccccataggggagtgaaatagaacatgaaaccgta--- 95538 Query: 182 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 241 |||||||||||||||||||| ||| ||||||||||||| |||||||||| |||||||| Sbjct: 95539 agctcccaagcagtgggaggagaattggatctctgaccgcatgcctgttgaggaatgagc 95598 Query: 242 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 301 ||||||||||||||||||||| ||||||||||||| |||||||||||||||||||| Sbjct: 95599 cggcgactcataggcagtggcctggttaagggaac-----ccaccggagccgtagcgaaa 95653 Query: 302 gcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 361 ||||||||| |||||| |||||||||||| ||||||||||||||||||||||||||||| Sbjct: 95654 gcgagtcttcctagggcaattgtcactgctcatggacccgaacctgggtgatctatccat 95713 Query: 362 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 421 |||||||||||||||||| | |||||||| ||||||||||||||||||||||||| ||| Sbjct: 95714 gaccaggatgaagcttgggtaaaactaagtggaggtccgaaccgactgatgttgaaaaat 95773 Query: 422 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95774 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 95833 Query: 482 cccgaaatgcgttgaggcgcagcagttgactggac-atctaggggtaaagcactgtttcg 540 |||||||||||||||||||||||||||||| |||| | |||||||||||||||||||||| Sbjct: 95834 cccgaaatgcgttgaggcgcagcagttgaccggactacctaggggtaaagcactgtttcg 95893 Query: 541 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 586 |||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 95894 gtgcgggctgcgaaagcggtaccaaatcgaggcaaactctgaatac 95939
>emb|X55033.1|CHPSRRNAO P.sativum chloroplast DNA of the single ribosomal RNA operon Length = 7920 Score = 833 bits (420), Expect = 0.0 Identities = 546/585 (93%), Gaps = 11/585 (1%) Strand = Plus / Plus Query: 2 aagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 61 |||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||| Sbjct: 4855 aagcatcactagcttatgctctgacccgagtaacatggggcacgtgaaatcccgtgtgaa 4914 Query: 62 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 121 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 4915 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagtgaagtagtacc 4974 Query: 122 gtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctg 181 ||||||||||||||||||||||||| | ||| ||||||||||||| ||||||||| Sbjct: 4975 gtgagggaaaggtgaaaagaacccctggcggggagtgaaatagaacatgaaaccgta--- 5031 Query: 182 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 241 ||||||||| |||||||||| | | | |||||||||||||||||||||||||||||| Sbjct: 5032 agctcccaa-cagtgggaggagctgggg--ctctgaccgcgtgcctgttgaagaatgagc 5088 Query: 242 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 301 |||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 5089 cggcgactcataggcagtggcttggttaagggaaa-----ccaccggagccgtagcgaaa 5143 Query: 302 gcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 361 ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 5144 gcgagtcttcatagggctattgtcactgcttatggacccgaacctgggtgatctatccat 5203 Query: 362 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 421 ||||||||||||| || | |||||||||| ||||||||||||||||||||||||| ||| Sbjct: 5204 gaccaggatgaagtttaggtgaaactaagtggaggtccgaaccgactgatgttgaaaaat 5263 Query: 422 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 481 ||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||| Sbjct: 5264 cagcggatgagttgtggttagcggtgaaatgccaatcgaacccagagctagctggttctc 5323 Query: 482 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5324 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 5383 Query: 542 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 586 |||||| ||| ||||||||||||||||||||||||||||||||| Sbjct: 5384 cgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatac 5428
>gb|M37430.1|PEACPDKAA Pea Chloroplast 4.5S, 5S, 16S and 23S mRNA Length = 7920 Score = 833 bits (420), Expect = 0.0 Identities = 546/585 (93%), Gaps = 11/585 (1%) Strand = Plus / Plus Query: 2 aagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 61 |||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||| Sbjct: 4855 aagcatcactagcttatgctctgacccgagtaacatggggcacgtgaaatcccgtgtgaa 4914 Query: 62 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 121 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 4915 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagtgaagtagtacc 4974 Query: 122 gtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctg 181 ||||||||||||||||||||||||| | ||| ||||||||||||| ||||||||| Sbjct: 4975 gtgagggaaaggtgaaaagaacccctggcggggagtgaaatagaacatgaaaccgta--- 5031 Query: 182 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 241 ||||||||| |||||||||| | | | |||||||||||||||||||||||||||||| Sbjct: 5032 agctcccaa-cagtgggaggagctgggg--ctctgaccgcgtgcctgttgaagaatgagc 5088 Query: 242 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 301 |||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 5089 cggcgactcataggcagtggcttggttaagggaaa-----ccaccggagccgtagcgaaa 5143 Query: 302 gcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 361 ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 5144 gcgagtcttcatagggctattgtcactgcttatggacccgaacctgggtgatctatccat 5203 Query: 362 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 421 ||||||||||||| || | |||||||||| ||||||||||||||||||||||||| ||| Sbjct: 5204 gaccaggatgaagtttaggtgaaactaagtggaggtccgaaccgactgatgttgaaaaat 5263 Query: 422 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 481 ||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||| Sbjct: 5264 cagcggatgagttgtggttagcggtgaaatgccaatcgaacccagagctagctggttctc 5323 Query: 482 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5324 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 5383 Query: 542 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 586 |||||| ||| ||||||||||||||||||||||||||||||||| Sbjct: 5384 cgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatac 5428
>gb|AY660566.1| Huperzia lucidula chloroplast, complete genome Length = 154373 Score = 827 bits (417), Expect = 0.0 Identities = 547/587 (93%), Gaps = 10/587 (1%) Strand = Plus / Minus Query: 2 aagcatcactagctt-atgctctgacccgagtagcatggggcacgtggaatcccgtgtga 60 |||||||||| |||| |||||| ||||||||||||||||||||| ||||||||||||| Sbjct: 146204 aagcatcactggctttatgctccaacccgagtagcatggggcacgcagaatcccgtgtga 146145 Query: 61 atcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtac 120 ||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||| Sbjct: 146144 atcagcaaggaccaccttgtaaggctaaatactcctgggtgaccgatagcaaagtagtac 146085 Query: 121 cgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgct 180 ||||||||||||||||||||||||||| ||| ||||||||||||| ||||||||| Sbjct: 146084 cgtgagggaaaggtgaaaagaacccccgtcggggagtgaaatagaacatgaaaccgtag- 146026 Query: 181 gagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgag 240 ||||||||||||||||||| ||| |||| ||||||||||||||||||||||||||| Sbjct: 146025 --gctcccaagcagtgggaggagaatcggatccctgaccgcgtgcctgttgaagaatgag 145968 Query: 241 ccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaa 300 ||||||||| |||||||||||| ||||||||||||| ||||||||||||||||||| Sbjct: 145967 ccggcgacttataggcagtggcctggttaagggaac-----ccaccggagccgtagcgaa 145913 Query: 301 agcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 360 |||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 145912 agcgagtcttcctagggcaattgtcactgcttatggacccgaacctgggtgatctatcca 145853 Query: 361 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 420 ||||||||||||||||||| |||||||||| ||||||||||||||||||||||||| || Sbjct: 145852 tgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaaaaa 145793 Query: 421 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 480 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 145792 tcagcggatgagttgtggttaggggtgaaatgccaatcgaacccagagctagctggttct 145733 Query: 481 ccccgaaatgcgttgaggcgcagcagttgactggac-atctaggggtaaagcactgtttc 539 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 145732 ccccgaaatgcgttgaggcgcagcagttgactggactatctaggggtaaagcactgtttc 145673 Query: 540 ggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 586 ||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 145672 ggtgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatac 145626 Score = 827 bits (417), Expect = 0.0 Identities = 547/587 (93%), Gaps = 10/587 (1%) Strand = Plus / Plus Query: 2 aagcatcactagctt-atgctctgacccgagtagcatggggcacgtggaatcccgtgtga 60 |||||||||| |||| |||||| ||||||||||||||||||||| ||||||||||||| Sbjct: 112258 aagcatcactggctttatgctccaacccgagtagcatggggcacgcagaatcccgtgtga 112317 Query: 61 atcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtac 120 ||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||| Sbjct: 112318 atcagcaaggaccaccttgtaaggctaaatactcctgggtgaccgatagcaaagtagtac 112377 Query: 121 cgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgct 180 ||||||||||||||||||||||||||| ||| ||||||||||||| ||||||||| Sbjct: 112378 cgtgagggaaaggtgaaaagaacccccgtcggggagtgaaatagaacatgaaaccgtag- 112436 Query: 181 gagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgag 240 ||||||||||||||||||| ||| |||| ||||||||||||||||||||||||||| Sbjct: 112437 --gctcccaagcagtgggaggagaatcggatccctgaccgcgtgcctgttgaagaatgag 112494 Query: 241 ccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaa 300 ||||||||| |||||||||||| ||||||||||||| ||||||||||||||||||| Sbjct: 112495 ccggcgacttataggcagtggcctggttaagggaac-----ccaccggagccgtagcgaa 112549 Query: 301 agcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 360 |||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 112550 agcgagtcttcctagggcaattgtcactgcttatggacccgaacctgggtgatctatcca 112609 Query: 361 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 420 ||||||||||||||||||| |||||||||| ||||||||||||||||||||||||| || Sbjct: 112610 tgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaaaaa 112669 Query: 421 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 480 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 112670 tcagcggatgagttgtggttaggggtgaaatgccaatcgaacccagagctagctggttct 112729 Query: 481 ccccgaaatgcgttgaggcgcagcagttgactggac-atctaggggtaaagcactgtttc 539 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 112730 ccccgaaatgcgttgaggcgcagcagttgactggactatctaggggtaaagcactgtttc 112789 Query: 540 ggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 586 ||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 112790 ggtgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatac 112836
>emb|X59768.1|CA23SRR C.americana 23S rRNA gene Length = 2902 Score = 777 bits (392), Expect = 0.0 Identities = 539/585 (92%), Gaps = 11/585 (1%) Strand = Plus / Plus Query: 2 aagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 61 ||||||||||| || |||||||||||||||||||||| |||||| ||||||||||||| Sbjct: 356 aagcatcactacgttgcgctctgacccgagtagcatgggacacgtgtaatcccgtgtgaa 415 Query: 62 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 121 ||||||||||||||||||||||||||||||||||||||| ||| |||| |||||||||| Sbjct: 416 tcagcaaggaccaccttgcaaggctaaatactcctgggtaaccaatagtaaagtagtacc 475 Query: 122 gtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctg 181 ||||||||| ||||||||||||||| | |||| ||||||||||||| ||||||||| Sbjct: 476 gtgagggaagggtgaaaagaacccc-attggggagtgaaatagaacatgaaaccgta--- 531 Query: 182 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 241 |||| ||||||||||||||| | || | |||||||||||||||||||||||||||||| Sbjct: 532 agctaccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagc 589 Query: 242 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 301 ||||||||||||||||| ||||||||||||||||| ||||||||||| |||||||| Sbjct: 590 cggcgactcataggcagcggcttggttaagggaac-----ccaccggagccatagcgaaa 644 Query: 302 gcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 361 |||||| || ||||| | |||||||||||||||||||||||||||||||||||||||||| Sbjct: 645 gcgagtattcataggactattgtcactgcttatggacccgaacctgggtgatctatccat 704 Query: 362 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 421 |||||||||||||||| | |||||||||| ||||||||||||||||||||||||||||| Sbjct: 705 gaccaggatgaagctttggtgaaactaagtggaggtccgaaccgactgatgttgaagaat 764 Query: 422 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 765 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 824 Query: 482 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 825 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcag 884 Query: 542 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 586 ||||||| | | ||||||||||||||||| ||||||||||||||| Sbjct: 885 tgcgggccgtgagagcggtaccaaatcgaagcaaactctgaatac 929
>gb|BT014358.1| Lycopersicon esculentum clone 133635F, mRNA sequence Length = 838 Score = 767 bits (387), Expect = 0.0 Identities = 470/496 (94%), Gaps = 10/496 (2%) Strand = Plus / Plus Query: 2 aagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 61 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 330 aagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 389 Query: 62 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 390 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 449 Query: 122 gtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctg 181 ||||||||| ||||||||||||||||| ||| ||||||||||||| ||||||||| Sbjct: 450 gtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccgta--- 506 Query: 182 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 241 |||||||||||||||||||| | || | |||||||||||||||||||||||||||||| Sbjct: 507 agctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagc 564 Query: 242 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 301 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 565 cggcgactcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaa 619 Query: 302 gcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 361 ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 620 gcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccat 679 Query: 362 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 421 |||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||| Sbjct: 680 gaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaat 739 Query: 422 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 740 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 799 Query: 482 cccgaaatgcgttgag 497 |||||||||||||||| Sbjct: 800 cccgaaatgcgttgag 815
>emb|AJ007508.1|GGN7508 Gnetum gnemon chloroplast psaC, ccsA, 4.5S rRNA, 5S rRNA, 16S rRNA (partial), 23S rRNA, and tRNA (Leu, Asn, Arg, Ala and Ile) genes Length = 9493 Score = 757 bits (382), Expect = 0.0 Identities = 531/576 (92%), Gaps = 11/576 (1%) Strand = Plus / Minus Query: 13 gcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggac 72 ||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6181 gcttacgctctaacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggac 6122 Query: 73 caccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaag 132 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6121 caccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaag 6062 Query: 133 gtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagc 192 |||||||||||||| | ||| ||||||||||||| ||||||||| ||| |||||| Sbjct: 6061 gtgaaaagaacccctatcggggagtgaaatagaacatgaaaccgta---agcctccaagc 6005 Query: 193 agtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcat 252 ||||||||| ||| | |||||||||||||||||| ||||||||||||||||||||| || Sbjct: 6004 agtgggaggagaatggaatctctgaccgcgtgccttttgaagaatgagccggcgacttat 5945 Query: 253 aggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaa 312 ||||||||||||||||||||| || |||||||||||||||||| |||||||||| | Sbjct: 5944 aggcagtggcttggttaagggcac-----ccaccggagccgtagcgagagcgagtcttca 5890 Query: 313 tagggcgattgtcactgctt-atggacccgaacctgggtgatctatccatgaccaggatg 371 |||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 5889 tagggcaattgtcactgctttatggacccgaacctgggtgatctatccatgaccaggatg 5830 Query: 372 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 431 ||||| ||||||||||||| |||||||||||||||||||||||| | ||||||||||||| Sbjct: 5829 aagct-ggatgaaactaagtagaggtccgaaccgactgatgttgcaaaatcagcggatga 5771 Query: 432 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5770 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 5711 Query: 492 gttgaggcgcagcagttgactgga-catctaggggtaaagcactgtttcggtgcgggctg 550 |||||||||||||||||||||||| | ||||||||||||||||||||||||| ||| | Sbjct: 5710 gttgaggcgcagcagttgactggaccgtctaggggtaaagcactgtttcggtataggccg 5651 Query: 551 cgcgagcggtaccaaatcgaggcaaactctgaatac 586 | |||||||| | ||||||||||||| ||||||| Sbjct: 5650 tgtaagcggtacgacatcgaggcaaactatgaatac 5615
>dbj|AK105837.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-203-F02, full insert sequence Length = 1822 Score = 714 bits (360), Expect = 0.0 Identities = 369/372 (99%) Strand = Plus / Plus Query: 2 aagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 61 ||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 257 aagcatcgctagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 316 Query: 62 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 317 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 376 Query: 122 gtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctg 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 377 gtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctg 436 Query: 182 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 437 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 496 Query: 242 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 497 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 556 Query: 302 gcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 361 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 557 gcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 616 Query: 362 gaccaggatgaa 373 |||||||||||| Sbjct: 617 gaccaggatgaa 628
>gb|AY178864.1| Adiantum capillus-veneris chloroplast, complete genome Length = 150568 Score = 708 bits (357), Expect = 0.0 Identities = 515/563 (91%), Gaps = 6/563 (1%) Strand = Plus / Plus Query: 25 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 84 |||| |||||||||||||||| |||||||||||||||||| |||||||||||| |||| Sbjct: 144298 acccaagtagcatggggcacgcaaaatcccgtgtgaatcagcgaggaccaccttgtaagg 144357 Query: 85 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 144 ||||||| ||||| |||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 144358 ctaaatattcctgagtgaccgatagcgaagcagtaccgtgagggaaaggtgaaaagaacc 144417 Query: 145 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 204 ||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| || Sbjct: 144418 cccgtcggggagtgaaatagaacatgaaaccgcg---agctcccaagcagtgggaggaga 144474 Query: 205 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 264 | | ||||||| ||||||||||||||||||||||||||||||||| ||||| ||||| Sbjct: 144475 atgagatctctaaccgcgtgcctgttgaagaatgagccggcgacttgtaggcggtggccc 144534 Query: 265 ggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgt 324 ||||||||| | ||||| |||||||||||||||||||||||||| | |||| ||||| Sbjct: 144535 ggttaagggggag-aaccc-ccggagccgtagcgaaagcgagtcttgctggggcaattgt 144592 Query: 325 cactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaa 384 ||| |||||| ||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 144593 caccgcttataaacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaa 144652 Query: 385 actaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggg 444 |||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 144653 actaagtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggg 144712 Query: 445 gtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagc 504 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 144713 gtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagc 144772 Query: 505 agttgactgga-catctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtacc 563 |||||||| || |||||||||||||||||| ||| |||||||||||||| |||||||||| Sbjct: 144773 agttgactagaccatctaggggtaaagcaccgttccggtgcgggctgcgagagcggtacc 144832 Query: 564 aaatcgaggcaaactctgaatac 586 ||||||||||||||||||||||| Sbjct: 144833 aaatcgaggcaaactctgaatac 144855 Score = 708 bits (357), Expect = 0.0 Identities = 515/563 (91%), Gaps = 6/563 (1%) Strand = Plus / Minus Query: 25 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 84 |||| |||||||||||||||| |||||||||||||||||| |||||||||||| |||| Sbjct: 88553 acccaagtagcatggggcacgcaaaatcccgtgtgaatcagcgaggaccaccttgtaagg 88494 Query: 85 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 144 ||||||| ||||| |||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 88493 ctaaatattcctgagtgaccgatagcgaagcagtaccgtgagggaaaggtgaaaagaacc 88434 Query: 145 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 204 ||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| || Sbjct: 88433 cccgtcggggagtgaaatagaacatgaaaccgcg---agctcccaagcagtgggaggaga 88377 Query: 205 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 264 | | ||||||| ||||||||||||||||||||||||||||||||| ||||| ||||| Sbjct: 88376 atgagatctctaaccgcgtgcctgttgaagaatgagccggcgacttgtaggcggtggccc 88317 Query: 265 ggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgt 324 ||||||||| | ||||| |||||||||||||||||||||||||| | |||| ||||| Sbjct: 88316 ggttaagggggag-aaccc-ccggagccgtagcgaaagcgagtcttgctggggcaattgt 88259 Query: 325 cactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaa 384 ||| |||||| ||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 88258 caccgcttataaacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaa 88199 Query: 385 actaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggg 444 |||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 88198 actaagtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggg 88139 Query: 445 gtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagc 504 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 88138 gtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagc 88079 Query: 505 agttgactgga-catctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtacc 563 |||||||| || |||||||||||||||||| ||| |||||||||||||| |||||||||| Sbjct: 88078 agttgactagaccatctaggggtaaagcaccgttccggtgcgggctgcgagagcggtacc 88019 Query: 564 aaatcgaggcaaactctgaatac 586 ||||||||||||||||||||||| Sbjct: 88018 aaatcgaggcaaactctgaatac 87996
>dbj|AK058324.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-014-B08, full insert sequence Length = 1310 Score = 696 bits (351), Expect = 0.0 Identities = 354/355 (99%) Strand = Plus / Plus Query: 232 aagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagc 291 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2 aagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagc 61 Query: 292 cgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtg 351 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 62 cgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtg 121 Query: 352 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 411 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 181 Query: 412 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 471 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 182 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 241 Query: 472 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 531 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 242 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 301 Query: 532 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 586 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 302 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 356
>dbj|AK059795.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-204-E09, full insert sequence Length = 819 Score = 694 bits (350), Expect = 0.0 Identities = 353/354 (99%) Strand = Plus / Plus Query: 233 agaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagcc 292 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 agaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagcc 60 Query: 293 gtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtga 352 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 gtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtga 120 Query: 353 tctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatg 412 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 tctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatg 180 Query: 413 ttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctag 472 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 ttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctag 240 Query: 473 ctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagca 532 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 ctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagca 300 Query: 533 ctgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 586 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 ctgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 354
>gb|L42844.1|CSKCPRGOL Cosmarium botrytis large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2669 Score = 690 bits (348), Expect = 0.0 Identities = 512/563 (90%), Gaps = 9/563 (1%) Strand = Plus / Plus Query: 25 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 84 ||||||||||||||||||||||| |||||||||||||||||| |||||||||| | |||| Sbjct: 378 acccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaagg 437 Query: 85 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 144 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 438 ctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacc 497 Query: 145 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 204 |||| ||| ||||||||||||| ||||||||| ||| ||||||||||||||| || Sbjct: 498 cccatcggggagtgaaatagaacatgaaaccgta---agcctccaagcagtgggaggaga 554 Query: 205 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 264 | | |||||||||||||||||||||||||||||||||||||||| |||||||||||| | Sbjct: 555 atggaatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcct 614 Query: 265 ggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgt 324 |||||||| | ||| || |||||||||||||||||||||||| |||||||| ||| Sbjct: 615 ggttaaggcga--gaagcc---ggagccgtagcgaaagcgagtctttctagggcgaatgt 669 Query: 325 cactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaa 384 ||||||||||||||||||||| |||||||||| ||||| ||||| |||||||||| |||| Sbjct: 670 cactgcttatggacccgaacccgggtgatctaaccatggccagggtgaagcttgggtgaa 729 Query: 385 actaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggg 444 | ||| ||||||||||||||||||||||||| |||||||||||||| ||||||||||| Sbjct: 730 gccaagtggaggtccgaaccgactgatgttgaaaaatcagcggatgagctgtggttaggg 789 Query: 445 gtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagc 504 |||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||| Sbjct: 790 gtgaaatgccactcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagc 849 Query: 505 agttgactggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtacc 563 ||||||||||| |||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 850 ggttgactggactgcctaggggtaaagcactgtttcggtgcgggctgcgaaagcggtacc 909 Query: 564 aaatcgaggcaaactctgaatac 586 ||||||||||||||||||||||| Sbjct: 910 aaatcgaggcaaactctgaatac 932
>gb|AF393590.1| Cosmarium botrytis large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2825 Score = 690 bits (348), Expect = 0.0 Identities = 512/563 (90%), Gaps = 9/563 (1%) Strand = Plus / Plus Query: 25 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 84 ||||||||||||||||||||||| |||||||||||||||||| |||||||||| | |||| Sbjct: 391 acccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaagg 450 Query: 85 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 144 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 451 ctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacc 510 Query: 145 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 204 |||| ||| ||||||||||||| ||||||||| ||| ||||||||||||||| || Sbjct: 511 cccatcggggagtgaaatagaacatgaaaccgta---agcctccaagcagtgggaggaga 567 Query: 205 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 264 | | |||||||||||||||||||||||||||||||||||||||| |||||||||||| | Sbjct: 568 atggaatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcct 627 Query: 265 ggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgt 324 |||||||| | ||| || |||||||||||||||||||||||| |||||||| ||| Sbjct: 628 ggttaaggcga--gaagcc---ggagccgtagcgaaagcgagtctttctagggcgaatgt 682 Query: 325 cactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaa 384 ||||||||||||||||||||| |||||||||| ||||| ||||| |||||||||| |||| Sbjct: 683 cactgcttatggacccgaacccgggtgatctaaccatggccagggtgaagcttgggtgaa 742 Query: 385 actaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggg 444 | ||| ||||||||||||||||||||||||| |||||||||||||| ||||||||||| Sbjct: 743 gccaagtggaggtccgaaccgactgatgttgaaaaatcagcggatgagctgtggttaggg 802 Query: 445 gtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagc 504 |||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||| Sbjct: 803 gtgaaatgccactcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagc 862 Query: 505 agttgactggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtacc 563 ||||||||||| |||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 863 ggttgactggactgcctaggggtaaagcactgtttcggtgcgggctgcgaaagcggtacc 922 Query: 564 aaatcgaggcaaactctgaatac 586 ||||||||||||||||||||||| Sbjct: 923 aaatcgaggcaaactctgaatac 945
>gb|AY958085.1| Staurastrum punctulatum chloroplast, complete genome Length = 157089 Score = 684 bits (345), Expect = 0.0 Identities = 512/563 (90%), Gaps = 11/563 (1%) Strand = Plus / Plus Query: 26 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 85 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 496 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 555 Query: 86 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 145 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 556 taaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaaccc 615 Query: 146 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 205 ||| ||| ||||||||||||| |||||||| | ||| ||||||||||||||| ||| Sbjct: 616 ccatcggggagtgaaatagaacatgaaaccg---taagcctccaagcagtgggaggagaa 672 Query: 206 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttg 265 | |||||||||||||||||||||||||||||||||||||||| |||||||||||| || Sbjct: 673 tggaatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcctg 732 Query: 266 gttaagggaacg-gaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgt 324 ||||||| || ||| || |||||||||||||||||||||||| |||||||| ||| Sbjct: 733 gttaagg---cgtgaagcc---ggagccgtagcgaaagcgagtctttctagggcgaatgt 786 Query: 325 cactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaa 384 ||||||||||||||||||||| |||||||||| ||||| ||||| |||||||||| |||| Sbjct: 787 cactgcttatggacccgaacccgggtgatctaaccatggccagggtgaagcttgggtgaa 846 Query: 385 actaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggg 444 | ||| ||||||||||||||||||||||||| |||||||||||||| ||||||||||| Sbjct: 847 gccaagtggaggtccgaaccgactgatgttgaaaaatcagcggatgagctgtggttaggg 906 Query: 445 gtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagc 504 |||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||| Sbjct: 907 gtgaaatgccactcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagc 966 Query: 505 agttgactggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtacc 563 ||||||||||| |||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 967 ggttgactggactgcctaggggtaaagcactgtttcggtgcgggctgcgaaagcggtacc 1026 Query: 564 aaatcgaggcaaactctgaatac 586 ||||||||||||||||||||||| Sbjct: 1027 aaatcgaggcaaactctgaatac 1049
>dbj|AB197035.2| Selaginella uncinata chloroplast DNA, complete genome Length = 144170 Score = 684 bits (345), Expect = 0.0 Identities = 519/575 (90%), Gaps = 9/575 (1%) Strand = Plus / Minus Query: 13 gcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggac 72 ||||| ||||||||||||||||||||||||||||||||||||||| |||||||| ||||| Sbjct: 138901 gcttacgctctgacccgagtagcatggggcacgtggaatcccgtgcgaatcagcgaggac 138842 Query: 73 caccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaag 132 ||||| | ||||||||||||| ||||||||||||||||||| |||||||||||||||||| Sbjct: 138841 cacctcgtaaggctaaatacttctgggtgaccgatagcgaaatagtaccgtgagggaaag 138782 Query: 133 gtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagc 192 |||||||||||||||| ||| ||||||||||||| |||||||| | ||||||| ||| Sbjct: 138781 gtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccgagc 138725 Query: 193 agtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcat 252 ||||||||| ||| ||||||||||||||||||||||||||||||||||||||||| || Sbjct: 138724 agtgggaggagaattggatctctgaccgcgtgcctgttgaagaatgagccggcgacttat 138665 Query: 253 aggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaa 312 |||| | ||| |||||||| |||||||||||||||||||||||||||||||||| Sbjct: 138664 aggcggcggcctggttaag-----ggaacccaccggagccgtagcgaaagcgagtcttcc 138610 Query: 313 tagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatga 372 ||||| | |||| ||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 138609 cagggcaactgtcgctgcttatggacccgaacccgggtgatctatccatgaccaggatga 138550 Query: 373 agcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgag 432 ||||||||| ||| | | ||||||||||||||||||||||||| |||||||||||||| Sbjct: 138549 agcttggatagaaccaggtggaggtccgaaccgactgatgttgaaaaatcagcggatgag 138490 Query: 433 ttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcg 492 | |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 138489 tcgtggttaggggtgaaatgccactcgaacccggagctagctggttctccccgaaatgcg 138430 Query: 493 ttgaggcgcagcagttgact-ggacatctaggggtaaagcactgtttcggtgcgggctgc 551 |||||||||||| ||||||| || | || | |||||||||||||| ||||||||||||| Sbjct: 138429 ttgaggcgcagcggttgactaggctacctggaggtaaagcactgttacggtgcgggctgc 138370 Query: 552 gcgagcggtaccaaatcgaggcaaactctgaatac 586 | |||| |||||||| ||||||||||||||||||| Sbjct: 138369 gagagcagtaccaaaccgaggcaaactctgaatac 138335 Score = 684 bits (345), Expect = 0.0 Identities = 519/575 (90%), Gaps = 9/575 (1%) Strand = Plus / Plus Query: 13 gcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggac 72 ||||| ||||||||||||||||||||||||||||||||||||||| |||||||| ||||| Sbjct: 82976 gcttacgctctgacccgagtagcatggggcacgtggaatcccgtgcgaatcagcgaggac 83035 Query: 73 caccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaag 132 ||||| | ||||||||||||| ||||||||||||||||||| |||||||||||||||||| Sbjct: 83036 cacctcgtaaggctaaatacttctgggtgaccgatagcgaaatagtaccgtgagggaaag 83095 Query: 133 gtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagc 192 |||||||||||||||| ||| ||||||||||||| |||||||| | ||||||| ||| Sbjct: 83096 gtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccgagc 83152 Query: 193 agtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcat 252 ||||||||| ||| ||||||||||||||||||||||||||||||||||||||||| || Sbjct: 83153 agtgggaggagaattggatctctgaccgcgtgcctgttgaagaatgagccggcgacttat 83212 Query: 253 aggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaa 312 |||| | ||| |||||||| |||||||||||||||||||||||||||||||||| Sbjct: 83213 aggcggcggcctggttaag-----ggaacccaccggagccgtagcgaaagcgagtcttcc 83267 Query: 313 tagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatga 372 ||||| | |||| ||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 83268 cagggcaactgtcgctgcttatggacccgaacccgggtgatctatccatgaccaggatga 83327 Query: 373 agcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgag 432 ||||||||| ||| | | ||||||||||||||||||||||||| |||||||||||||| Sbjct: 83328 agcttggatagaaccaggtggaggtccgaaccgactgatgttgaaaaatcagcggatgag 83387 Query: 433 ttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcg 492 | |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 83388 tcgtggttaggggtgaaatgccactcgaacccggagctagctggttctccccgaaatgcg 83447 Query: 493 ttgaggcgcagcagttgact-ggacatctaggggtaaagcactgtttcggtgcgggctgc 551 |||||||||||| ||||||| || | || | |||||||||||||| ||||||||||||| Sbjct: 83448 ttgaggcgcagcggttgactaggctacctggaggtaaagcactgttacggtgcgggctgc 83507 Query: 552 gcgagcggtaccaaatcgaggcaaactctgaatac 586 | |||| |||||||| ||||||||||||||||||| Sbjct: 83508 gagagcagtaccaaaccgaggcaaactctgaatac 83542
>gb|AY330869.1| Cynomorium coccineum clone Cyno_0 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2754 Score = 656 bits (331), Expect = 0.0 Identities = 522/581 (89%), Gaps = 11/581 (1%) Strand = Plus / Plus Query: 6 atcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcag 65 |||| ||||||||||| |||||||||||||||||| |||||||||||||||||||||||| Sbjct: 378 atcattagcttatgctttgacccgagtagcatgggacacgtggaatcccgtgtgaatcag 437 Query: 66 caaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtga 125 ||||||||||||||||||||||||||||| ||||||||| |||| ||||||||||| ||| Sbjct: 438 caaggaccaccttgcaaggctaaatactcttgggtgaccaatagtgaagtagtaccatga 497 Query: 126 gggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagct 185 ||||| ||||||||||||||| | |||| ||||||||||||| ||||| | | |||| Sbjct: 498 gggaagggtgaaaagaacccctattggggagtgaaatagaacatgaaaacata---agct 554 Query: 186 cccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggc 245 ||||||||||||||| | || | |||||||||||||||||||||||||||||||||| Sbjct: 555 accaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggc 612 Query: 246 gactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcga 305 |||||||| | |||||| ||||||||| |||| ||||||||||| |||||||||| | Sbjct: 613 gactcataagtagtggcctggttaagg----ggaa-ccaccggagccatagcgaaagcaa 667 Query: 306 gtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgacc 365 ||||| ||||||| | ||||| |||||||| |||||||| ||||||||||| |||||||| Sbjct: 668 gtcttcatagggcaaatgtcattgcttatgtacccgaacttgggtgatctaaccatgacc 727 Query: 366 aggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagc 425 |||||||| |||| |||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 728 aggatgaaatttggttgaaactaagtggaggtccgaaccgactgatgttgaagaatcagc 787 Query: 426 ggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccg 485 |||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||| Sbjct: 788 ggatgagttgtggttaggggtgaaatgccaatcgaacccaaagctagctggttctccccg 847 Query: 486 aaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcg 545 ||||||||| ||| ||||||||| || ||||||||||||||||||||||||||||||||| Sbjct: 848 aaatgcgtttaggggcagcagtt-accggacatctaggggtaaagcactgtttcggtgcg 906 Query: 546 ggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 586 || || |||||||||||||| |||||||||| ||||||| Sbjct: 907 ggtctcgagagcggtaccaaattgaggcaaactatgaatac 947
>dbj|AB189069.1| Silene latifolia chloroplast DNA, partial sequence, rpoB gene to rps7 gene region Length = 47249 Score = 648 bits (327), Expect = 0.0 Identities = 363/375 (96%), Gaps = 5/375 (1%) Strand = Plus / Plus Query: 212 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 271 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46818 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 46877 Query: 272 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 331 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 46878 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 46932 Query: 332 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 391 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 46933 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 46992 Query: 392 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 451 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46993 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 47052 Query: 452 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 511 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47053 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 47112 Query: 512 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 571 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 47113 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 47172 Query: 572 gcaaactctgaatac 586 ||||||||||||||| Sbjct: 47173 gcaaactctgaatac 47187 Score = 313 bits (158), Expect = 4e-82 Identities = 190/200 (95%), Gaps = 3/200 (1%) Strand = Plus / Plus Query: 2 aagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46607 aagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 46666 Query: 62 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46667 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 46726 Query: 122 gtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctg 181 ||||||||| ||||||||||||||||| ||| ||||||||||||| |||||||| | Sbjct: 46727 gtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---ta 46783 Query: 182 agctcccaagcagtgggagg 201 ||||| |||||||||||||| Sbjct: 46784 agctctcaagcagtgggagg 46803
>gb|AF393582.1| Chaetosphaeridium globosum SAG 26.98 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2875 Score = 644 bits (325), Expect = 0.0 Identities = 506/563 (89%), Gaps = 10/563 (1%) Strand = Plus / Plus Query: 25 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 84 |||||||||||||||| |||||| |||||||||||||||||| |||||||||| | |||| Sbjct: 380 acccgagtagcatgggacacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaagg 439 Query: 85 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 144 ||||||||||||||||||||||||| |||| ||||||| ||||||||||||||||||||| Sbjct: 440 ctaaatactcctgggtgaccgatagagaagaagtaccgcgagggaaaggtgaaaagaacc 499 Query: 145 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 204 |||| ||| ||||||||||||| ||||| ||| |||| |||||||||||||| || Sbjct: 500 cccatcggggagtgaaatagaacatgaaatcgta---agctttcaagcagtgggaggaga 556 Query: 205 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 264 | |||||||||||||||||||||||||||||||||||||||| |||||||||||| | Sbjct: 557 attcaatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcgt 616 Query: 265 ggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgt 324 ||||||||||| ||||||||||||||||||||||||||| || ||||||||||| Sbjct: 617 ggttaagggaatt-----caccggagccgtagcgaaagcgagtct-aacagggcgattgt 670 Query: 325 cactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaa 384 ||||||||||||||||||||| |||||||||||||||| |||||||||||||||| |||| Sbjct: 671 cactgcttatggacccgaacccgggtgatctatccatggccaggatgaagcttgggtgaa 730 Query: 385 actaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggg 444 || ||| ||||||||||||||||||||||||| |||||||||||||| ||||||||| | Sbjct: 731 accaagtggaggtccgaaccgactgatgttgaaaaatcagcggatgagctgtggttagcg 790 Query: 445 gtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagc 504 ||||||| ||| |||||| | ||||||||||||||||||||||||||||||||||||||| Sbjct: 791 gtgaaataccaatcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagc 850 Query: 505 agttgactggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtacc 563 ||| | ||| | |||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 851 ggttaattgggctgcctaggggtaaagcactgtttcggtgcgggctgcgaaagcggtacc 910 Query: 564 aaatcgaggcaaactctgaatac 586 ||||||||||||||||||||||| Sbjct: 911 aaatcgaggcaaactctgaatac 933
>gb|AY848693.1| Vitis pseudoreticulata clone EST-4 23S ribosomal RNA, partial sequence; chloroplast Length = 673 Score = 640 bits (323), Expect = e-180 Identities = 362/375 (96%), Gaps = 5/375 (1%) Strand = Plus / Plus Query: 212 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 271 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 105 Query: 272 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 331 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 106 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 160 Query: 332 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 391 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 161 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 220 Query: 392 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 451 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 221 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 280 Query: 452 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 511 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 281 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcggttgac 340 Query: 512 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 571 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 341 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 400 Query: 572 gcaaactctgaatac 586 ||||||||||||||| Sbjct: 401 gcaaactctgaatac 415
>gb|AF263517.1|AF263517 Vitis vinifera 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 433 Score = 634 bits (320), Expect = e-179 Identities = 413/442 (93%), Gaps = 9/442 (2%) Strand = Plus / Plus Query: 119 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 178 |||||||||||| ||||||||||||||||| ||| ||||||||||||| ||||||||| Sbjct: 1 accgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccgta 60 Query: 179 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 238 || ||||||||||||||||| || | | ||||||||||||||||||||||||||| Sbjct: 61 ---agttcccaagcagtgggaggagacggggg-ctctgaccgcgtgcctgttgaagaatg 116 Query: 239 agccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcg 298 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 117 agccggcgactcataggcagtggcttggttaagggaac-----ccaccggagccgtagcg 171 Query: 299 aaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatc 358 |||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 172 aaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatc 231 Query: 359 catgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaag 418 ||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||| Sbjct: 232 catgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaag 291 Query: 419 aatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggtt 478 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 292 aatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggtt 351 Query: 479 ctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgttt 538 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 352 ctccccgaaatgcgttgaggcgcagcggttgactggacatctaggggtaaagcactgttt 411 Query: 539 cggtgcgggctgcgcgagcggt 560 |||||||||| ||| ||||||| Sbjct: 412 cggtgcgggccgcgagagcggt 433
>gb|DQ176643.1| Vitis pseudoreticulata clone EST-423 23S ribosomal RNA, partial sequence; chloroplast Length = 674 Score = 632 bits (319), Expect = e-178 Identities = 361/375 (96%), Gaps = 5/375 (1%) Strand = Plus / Plus Query: 212 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 271 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 62 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 121 Query: 272 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 331 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 122 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 176 Query: 332 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 391 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 177 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 236 Query: 392 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 451 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 237 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 296 Query: 452 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 511 ||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 297 gccgctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcggttgac 356 Query: 512 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 571 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 357 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 416 Query: 572 gcaaactctgaatac 586 ||||||||||||||| Sbjct: 417 gcaaactctgaatac 431
>gb|AF494278.1| Chaetosphaeridium globosum chloroplast, complete genome Length = 131183 Score = 628 bits (317), Expect = e-177 Identities = 504/563 (89%), Gaps = 10/563 (1%) Strand = Plus / Minus Query: 25 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 84 |||||||||||||||| |||||| |||||||||||||||||| |||||||||| | |||| Sbjct: 124885 acccgagtagcatgggacacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaagg 124826 Query: 85 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 144 ||||||||||||||||||||||||| |||| ||||||| ||||||||||||||||||||| Sbjct: 124825 ctaaatactcctgggtgaccgatagagaagaagtaccgcgagggaaaggtgaaaagaacc 124766 Query: 145 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 204 |||| ||| ||||||||||||| ||||| ||| |||| |||||||||||||| || Sbjct: 124765 cccatcggggagtgaaatagaacatgaaatcgta---agctttcaagcagtgggaggaga 124709 Query: 205 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 264 | |||||||||||||||||||||||||||||||||||||||| |||||||||||| | Sbjct: 124708 attcaatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcgt 124649 Query: 265 ggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgt 324 ||||||||||| ||||||||||||||||||||||||||| || ||||||||||| Sbjct: 124648 ggttaagggaatt-----caccggagccgtagcgaaagcgagtct-aacagggcgattgt 124595 Query: 325 cactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaa 384 ||||||||||||||||||||| |||||||||||||||| |||||||||||||||| |||| Sbjct: 124594 cactgcttatggacccgaacccgggtgatctatccatggccaggatgaagcttgggtgaa 124535 Query: 385 actaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggg 444 | ||| ||||||||||||||||||||||||| |||||||||||||| ||||||||| | Sbjct: 124534 gccaagtggaggtccgaaccgactgatgttgaaaaatcagcggatgagctgtggttagcg 124475 Query: 445 gtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagc 504 ||||||| ||| |||||| | ||||||||||||||||||||||||||||||||||||||| Sbjct: 124474 gtgaaataccaatcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagc 124415 Query: 505 agttgactggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtacc 563 ||| | ||| | |||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 124414 ggttaattgggctgcctaggggtaaagcactgtttcggtgcgggctgcgaaagcggtacc 124355 Query: 564 aaatcgaggcaaactctgaatac 586 |||||||| |||||||||||||| Sbjct: 124354 aaatcgagtcaaactctgaatac 124332 Score = 628 bits (317), Expect = e-177 Identities = 504/563 (89%), Gaps = 10/563 (1%) Strand = Plus / Plus Query: 25 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 84 |||||||||||||||| |||||| |||||||||||||||||| |||||||||| | |||| Sbjct: 94981 acccgagtagcatgggacacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaagg 95040 Query: 85 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 144 ||||||||||||||||||||||||| |||| ||||||| ||||||||||||||||||||| Sbjct: 95041 ctaaatactcctgggtgaccgatagagaagaagtaccgcgagggaaaggtgaaaagaacc 95100 Query: 145 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 204 |||| ||| ||||||||||||| ||||| ||| |||| |||||||||||||| || Sbjct: 95101 cccatcggggagtgaaatagaacatgaaatcgta---agctttcaagcagtgggaggaga 95157 Query: 205 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 264 | |||||||||||||||||||||||||||||||||||||||| |||||||||||| | Sbjct: 95158 attcaatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcgt 95217 Query: 265 ggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgt 324 ||||||||||| ||||||||||||||||||||||||||| || ||||||||||| Sbjct: 95218 ggttaagggaatt-----caccggagccgtagcgaaagcgagtct-aacagggcgattgt 95271 Query: 325 cactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaa 384 ||||||||||||||||||||| |||||||||||||||| |||||||||||||||| |||| Sbjct: 95272 cactgcttatggacccgaacccgggtgatctatccatggccaggatgaagcttgggtgaa 95331 Query: 385 actaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggg 444 | ||| ||||||||||||||||||||||||| |||||||||||||| ||||||||| | Sbjct: 95332 gccaagtggaggtccgaaccgactgatgttgaaaaatcagcggatgagctgtggttagcg 95391 Query: 445 gtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagc 504 ||||||| ||| |||||| | ||||||||||||||||||||||||||||||||||||||| Sbjct: 95392 gtgaaataccaatcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagc 95451 Query: 505 agttgactggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtacc 563 ||| | ||| | |||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 95452 ggttaattgggctgcctaggggtaaagcactgtttcggtgcgggctgcgaaagcggtacc 95511 Query: 564 aaatcgaggcaaactctgaatac 586 |||||||| |||||||||||||| Sbjct: 95512 aaatcgagtcaaactctgaatac 95534
>emb|Y08501.2|MIATGENA Arabidopsis thaliana mitochondrial genome Length = 366924 Score = 624 bits (315), Expect = e-176 Identities = 406/433 (93%), Gaps = 10/433 (2%) Strand = Plus / Plus Query: 155 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 214 ||||||||||||| ||||||||| |||||||||||||||||||| | || ||| Sbjct: 364690 agtgaaatagaacatgaaaccgta---agctcccaagcagtgggaggagccc-tgggctc 364745 Query: 215 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 274 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 364746 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 364805 Query: 275 acggaacccaccggagccgtagcgaaag-cgagtcttaatagggcgattgtcactgctta 333 || ||||||||||||||||||||| |||||||| ||||||| |||||||||||||| Sbjct: 364806 ac-----ccaccggagccgtagcgaaaggcgagtcttcatagggcaattgtcactgctta 364860 Query: 334 tggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcag 393 ||||||||||||||||||||||||| |||||||||||||||||||| |||||||||| | Sbjct: 364861 tggacccgaacctgggtgatctatctatgaccaggatgaagcttgggtgaaactaagtgg 364920 Query: 394 aggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgc 453 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 364921 aggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatgc 364980 Query: 454 cactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactg 513 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 364981 cactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactg 365040 Query: 514 gacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggc 573 ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| Sbjct: 365041 gacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggc 365100 Query: 574 aaactctgaatac 586 ||||||||||||| Sbjct: 365101 aaactctgaatac 365113 Score = 67.9 bits (34), Expect = 4e-08 Identities = 43/46 (93%) Strand = Plus / Minus Query: 100 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 145 |||||||||||| | |||||||||||||||||||||||||||||| Sbjct: 11520 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaaccc 11475
>dbj|AP002983.1| Lotus japonicus chloroplast DNA, complete genome Length = 150519 Score = 624 bits (315), Expect = e-176 Identities = 360/375 (96%), Gaps = 5/375 (1%) Strand = Plus / Minus Query: 212 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 271 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 129969 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggtagtggcttggttaag 129910 Query: 272 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 331 |||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 129909 ggaaa-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 129855 Query: 332 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 391 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 129854 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 129795 Query: 392 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 451 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 129794 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 129735 Query: 452 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 511 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 129734 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 129675 Query: 512 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 571 |||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 129674 cggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 129615 Query: 572 gcaaactctgaatac 586 ||||||||||||||| Sbjct: 129614 gcaaactctgaatac 129600 Score = 624 bits (315), Expect = e-176 Identities = 360/375 (96%), Gaps = 5/375 (1%) Strand = Plus / Plus Query: 212 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 271 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 102487 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggtagtggcttggttaag 102546 Query: 272 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 331 |||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 102547 ggaaa-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 102601 Query: 332 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 391 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 102602 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 102661 Query: 392 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 451 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102662 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 102721 Query: 452 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 511 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102722 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 102781 Query: 512 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 571 |||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 102782 cggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 102841 Query: 572 gcaaactctgaatac 586 ||||||||||||||| Sbjct: 102842 gcaaactctgaatac 102856 Score = 313 bits (158), Expect = 4e-82 Identities = 190/200 (95%), Gaps = 3/200 (1%) Strand = Plus / Minus Query: 2 aagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130180 aagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 130121 Query: 62 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 121 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 130120 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagtgaagtagtacc 130061 Query: 122 gtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctg 181 ||||||||| ||||||||||||||||| ||| ||||||||||||| |||||||| | Sbjct: 130060 gtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---ta 130004 Query: 182 agctcccaagcagtgggagg 201 |||||||||||||||||||| Sbjct: 130003 agctcccaagcagtgggagg 129984 Score = 313 bits (158), Expect = 4e-82 Identities = 190/200 (95%), Gaps = 3/200 (1%) Strand = Plus / Plus Query: 2 aagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102276 aagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 102335 Query: 62 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 121 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 102336 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagtgaagtagtacc 102395 Query: 122 gtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctg 181 ||||||||| ||||||||||||||||| ||| ||||||||||||| |||||||| | Sbjct: 102396 gtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---ta 102452 Query: 182 agctcccaagcagtgggagg 201 |||||||||||||||||||| Sbjct: 102453 agctcccaagcagtgggagg 102472
>gb|AF355764.1| Rhizophora mangle 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2883 Score = 609 bits (307), Expect = e-171 Identities = 358/375 (95%), Gaps = 5/375 (1%) Strand = Plus / Plus Query: 212 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 271 |||||| ||||||||||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 581 ctctgaacgcgtgcctgttgaagaattaaccggcgactcataggcagtggcttggttaag 640 Query: 272 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 331 ||||| ||||||||||||||||||||||||||||| |||||| |||||||||||| Sbjct: 641 ggaac-----ccaccggagccgtagcgaaagcgagtcttcgtagggcaattgtcactgct 695 Query: 332 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 391 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 696 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 755 Query: 392 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 451 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 756 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 815 Query: 452 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 511 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 816 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 875 Query: 512 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 571 ||||||||||||||||||||||||||||||||||||| ||| |||| ||||||||||||| Sbjct: 876 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcagtaccaaatcgag 935 Query: 572 gcaaactctgaatac 586 ||||||||||||||| Sbjct: 936 gcaaactctgaatac 950 Score = 297 bits (150), Expect = 2e-77 Identities = 188/200 (94%), Gaps = 3/200 (1%) Strand = Plus / Plus Query: 2 aagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 61 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 363 aagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 422 Query: 62 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 121 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 423 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtactacc 482 Query: 122 gtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctg 181 ||||||||| ||||||||||||||||| || ||||||||||||| |||||||| | Sbjct: 483 gtgagggaagggtgaaaagaacccccatccgggagtgaaatagaacatgaaaccg---ta 539 Query: 182 agctcccaagcagtgggagg 201 |||||||||||||||||||| Sbjct: 540 agctcccaagcagtgggagg 559
>dbj|BA000042.1| Nicotiana tabacum mitochondrial DNA, complete genome Length = 430597 Score = 609 bits (307), Expect = e-171 Identities = 359/375 (95%), Gaps = 6/375 (1%) Strand = Plus / Plus Query: 212 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 271 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 177405 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 177464 Query: 272 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 331 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 177465 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 177519 Query: 332 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 391 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 177520 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 177579 Query: 392 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 451 ||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 177580 ggaggtccga-ccgactgatgttgaagaatcagcgggtgagttgtggttaggggtgaaat 177638 Query: 452 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 511 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 177639 gccactcgcacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 177698 Query: 512 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 571 |||||||||||||||||||||| |||||||||||||| ||| |||||||||||||||||| Sbjct: 177699 tggacatctaggggtaaagcacggtttcggtgcgggccgcgagagcggtaccaaatcgag 177758 Query: 572 gcaaactctgaatac 586 ||||||||||||||| Sbjct: 177759 gcaaactctgaatac 177773 Score = 67.9 bits (34), Expect = 4e-08 Identities = 43/46 (93%) Strand = Plus / Plus Query: 100 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 145 |||||||||||| | |||||||||||||||||||||||||||||| Sbjct: 418398 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaaccc 418443 Score = 67.9 bits (34), Expect = 4e-08 Identities = 43/46 (93%) Strand = Plus / Plus Query: 100 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 145 |||||||||||| | |||||||||||||||||||||||||||||| Sbjct: 67648 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaaccc 67693 Score = 44.1 bits (22), Expect = 0.51 Identities = 25/26 (96%) Strand = Plus / Plus Query: 2 aagcatcactagcttatgctctgacc 27 |||||||||||||||| ||||||||| Sbjct: 177387 aagcatcactagcttaggctctgacc 177412
>gb|L49152.1|MEWCPRGOL Mesostigma viride large-subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2571 Score = 595 bits (300), Expect = e-167 Identities = 501/563 (88%), Gaps = 10/563 (1%) Strand = Plus / Plus Query: 26 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 85 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||| | Sbjct: 378 cccgagtagcatggggcacgtgaaatcccgtgtgaatccgcgaggaccacctcgtaagac 437 Query: 86 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 145 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 438 taaatactcctgggtgaccgatagcgaaatagtaccgtgagggaaaggtgaaaagaaccc 497 Query: 146 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 205 ||| ||| ||||||||||||| ||||||||| |||| |||||||||||||| | Sbjct: 498 ccatcggggagtgaaatagaacatgaaaccgta---agcttacaagcagtgggaggaggt 554 Query: 206 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttg 265 |||||||||||||||||||| ||||||||||||||||||||| ||||||||||||| | Sbjct: 555 tttgatctctgaccgcgtgcctattgaagaatgagccggcgacttataggcagtggctag 614 Query: 266 gttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtc 325 ||||| || || || ||||||||| ||||||||||||||||||||||||||| |||| Sbjct: 615 gttaa-ggtacaaaa---accggagccatagcgaaagcgagtcttaatagggcga-tgtc 669 Query: 326 actgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaa 385 |||| ||| |||||||||| |||||||||| ||||| |||||||||||||| | ||||| Sbjct: 670 actgtctatagacccgaacccgggtgatctaaccatggccaggatgaagctttggtgaaa 729 Query: 386 ctaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttagggg 445 || || || |||||||||||| ||||||||| |||| |||||||||||||||||||||| Sbjct: 730 ctcagtggaagtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttagggg 789 Query: 446 tgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagca 505 |||||||||| |||||| | ||||||||||||||||||||||||||||||||||||||| Sbjct: 790 tgaaatgccaatcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcg 849 Query: 506 gttgact--ggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtacc 563 |||| | || ||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 850 gttggatagggctttctaggggtaaagcactgtttcggtgcgggctgcgagagcggtacc 909 Query: 564 aaatcgaggcaaactctgaatac 586 ||||||| ||||||||||||||| Sbjct: 910 aaatcgatgcaaactctgaatac 932
>gb|AF166114.1|AF166114 Mesostigma viride chloroplast DNA, complete genome Length = 118360 Score = 595 bits (300), Expect = e-167 Identities = 501/563 (88%), Gaps = 10/563 (1%) Strand = Plus / Minus Query: 26 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 85 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||| | Sbjct: 115284 cccgagtagcatggggcacgtgaaatcccgtgtgaatccgcgaggaccacctcgtaagac 115225 Query: 86 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 145 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 115224 taaatactcctgggtgaccgatagcgaaatagtaccgtgagggaaaggtgaaaagaaccc 115165 Query: 146 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 205 ||| ||| ||||||||||||| ||||||||| |||| |||||||||||||| | Sbjct: 115164 ccatcggggagtgaaatagaacatgaaaccgta---agcttacaagcagtgggaggaggt 115108 Query: 206 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttg 265 |||||||||||||||||||| ||||||||||||||||||||| ||||||||||||| | Sbjct: 115107 tttgatctctgaccgcgtgcctattgaagaatgagccggcgacttataggcagtggctag 115048 Query: 266 gttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtc 325 ||||| || || || ||||||||| ||||||||||||||||||||||||||| |||| Sbjct: 115047 gttaa-ggtacaaaa---accggagccatagcgaaagcgagtcttaatagggcga-tgtc 114993 Query: 326 actgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaa 385 |||| ||| |||||||||| |||||||||| ||||| |||||||||||||| | ||||| Sbjct: 114992 actgtctatagacccgaacccgggtgatctaaccatggccaggatgaagctttggtgaaa 114933 Query: 386 ctaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttagggg 445 || || || |||||||||||| ||||||||| |||| |||||||||||||||||||||| Sbjct: 114932 ctcagtggaagtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttagggg 114873 Query: 446 tgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagca 505 |||||||||| |||||| | ||||||||||||||||||||||||||||||||||||||| Sbjct: 114872 tgaaatgccaatcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcg 114813 Query: 506 gttgact--ggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtacc 563 |||| | || ||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 114812 gttggatagggctttctaggggtaaagcactgtttcggtgcgggctgcgagagcggtacc 114753 Query: 564 aaatcgaggcaaactctgaatac 586 ||||||| ||||||||||||||| Sbjct: 114752 aaatcgatgcaaactctgaatac 114730 Score = 595 bits (300), Expect = e-167 Identities = 501/563 (88%), Gaps = 10/563 (1%) Strand = Plus / Plus Query: 26 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 85 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||| | Sbjct: 86704 cccgagtagcatggggcacgtgaaatcccgtgtgaatccgcgaggaccacctcgtaagac 86763 Query: 86 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 145 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 86764 taaatactcctgggtgaccgatagcgaaatagtaccgtgagggaaaggtgaaaagaaccc 86823 Query: 146 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 205 ||| ||| ||||||||||||| ||||||||| |||| |||||||||||||| | Sbjct: 86824 ccatcggggagtgaaatagaacatgaaaccgta---agcttacaagcagtgggaggaggt 86880 Query: 206 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttg 265 |||||||||||||||||||| ||||||||||||||||||||| ||||||||||||| | Sbjct: 86881 tttgatctctgaccgcgtgcctattgaagaatgagccggcgacttataggcagtggctag 86940 Query: 266 gttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtc 325 ||||| || || || ||||||||| ||||||||||||||||||||||||||| |||| Sbjct: 86941 gttaa-ggtacaaaa---accggagccatagcgaaagcgagtcttaatagggcga-tgtc 86995 Query: 326 actgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaa 385 |||| ||| |||||||||| |||||||||| ||||| |||||||||||||| | ||||| Sbjct: 86996 actgtctatagacccgaacccgggtgatctaaccatggccaggatgaagctttggtgaaa 87055 Query: 386 ctaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttagggg 445 || || || |||||||||||| ||||||||| |||| |||||||||||||||||||||| Sbjct: 87056 ctcagtggaagtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttagggg 87115 Query: 446 tgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagca 505 |||||||||| |||||| | ||||||||||||||||||||||||||||||||||||||| Sbjct: 87116 tgaaatgccaatcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcg 87175 Query: 506 gttgact--ggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtacc 563 |||| | || ||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 87176 gttggatagggctttctaggggtaaagcactgtttcggtgcgggctgcgagagcggtacc 87235 Query: 564 aaatcgaggcaaactctgaatac 586 ||||||| ||||||||||||||| Sbjct: 87236 aaatcgatgcaaactctgaatac 87258
>gb|AF143267.1| Vitis vinifera 23S ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 425 Score = 589 bits (297), Expect = e-165 Identities = 396/426 (92%), Gaps = 11/426 (2%) Strand = Plus / Plus Query: 121 cgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgct 180 |||||||||| |||||||||||||| | ||| ||||||||||||| ||||||||| Sbjct: 1 cgtgagggaagggtgaaaagaaccc--atcggggagtgaaatagaacatgaaaccgta-- 56 Query: 181 gagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgag 240 || ||||||||||||||||| || | | ||||||||||||||||||||||||||||| Sbjct: 57 -agttcccaagcagtgggaggagacggggg-ctctgaccgcgtgcctgttgaagaatgag 114 Query: 241 ccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaa 300 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 115 ccggcgactcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaa 169 Query: 301 agcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 360 |||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 170 agcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatcca 229 Query: 361 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 420 ||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||| Sbjct: 230 tgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaa 289 Query: 421 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 290 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggctct 349 Query: 481 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 540 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 350 ccccgaaatgcgttgaggcgcagcggttgactggacatctaggggtaaagcactgtttcg 409 Query: 541 gtgcgg 546 |||||| Sbjct: 410 gtgcgg 415
>gb|AF355760.1| Rhizophora mucronata 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2902 Score = 587 bits (296), Expect = e-164 Identities = 358/376 (95%), Gaps = 7/376 (1%) Strand = Plus / Plus Query: 212 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 271 |||||| ||||||||||||||| ||||||||||||||||||||| ||||||||||||||| Sbjct: 581 ctctgaacgcgtgcctgttgaa-aatgagccggcgactcataggaagtggcttggttaag 639 Query: 272 ggaacggaacccaccgga-gccgtagcgaaagcgagtcttaatagggcgattgtcactgc 330 ||||| |||||||| ||||||||||||||||||||| |||||| ||||||||||| Sbjct: 640 ggaac-----ccaccggaagccgtagcgaaagcgagtcttcgtagggcaattgtcactgc 694 Query: 331 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 390 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 695 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 754 Query: 391 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 450 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 755 tggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 814 Query: 451 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 510 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 815 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 874 Query: 511 ctggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcga 570 ||||||||||| |||||||||||||||||||||||||| ||| ||||||||||||||||| Sbjct: 875 ctggacatctaagggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcga 934 Query: 571 ggcaaactctgaatac 586 |||||||||||||||| Sbjct: 935 ggcaaactctgaatac 950 Score = 297 bits (150), Expect = 2e-77 Identities = 188/200 (94%), Gaps = 3/200 (1%) Strand = Plus / Plus Query: 2 aagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 61 ||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 363 aagcatccctagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 422 Query: 62 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 121 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 423 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtaatacc 482 Query: 122 gtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctg 181 ||||||||| ||||||||||||||||| ||| ||||||||||||| |||||||| | Sbjct: 483 gtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---ta 539 Query: 182 agctcccaagcagtgggagg 201 |||||||||||||||||||| Sbjct: 540 agctcccaagcagtgggagg 559
>gb|AF393591.1| Coleochaete nitellarum large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2888 Score = 587 bits (296), Expect = e-164 Identities = 495/558 (88%), Gaps = 10/558 (1%) Strand = Plus / Plus Query: 30 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 89 ||||| ||||| |||||| |||||| | |||||| |||||||||||||| ||||||||| Sbjct: 385 agtagtatgggacacgtgaaatcccttatgaatctacaaggaccaccttgtaaggctaaa 444 Query: 90 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 149 |||||||||||||||||||| |||| ||||||| ||||||||||||||||||||||||| Sbjct: 445 tactcctgggtgaccgatagtgaagaagtaccgcgagggaaaggtgaaaagaacccccat 504 Query: 150 tgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtg 209 ||| ||||||||||||| ||||||| | |||| |||||||||||||| | | Sbjct: 505 aggggagtgaaatagaacatgaaaccata---agctttcaagcagtgggaggaggattga 561 Query: 210 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 269 | || ||||||||||||||||||||||||||||||||||| |||||||||||| |||||| Sbjct: 562 acctttgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcatggtta 621 Query: 270 agggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactg 329 |||||| |||||| |||| |||||||||| |||||| |||||||||||||||| Sbjct: 622 agggaat-----ccaccgaagccatagcgaaagcaagtctttc-agggcgattgtcactg 675 Query: 330 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 389 ||||||||||||||| ||||||||||||||||||||||||||||||||| | |||| || Sbjct: 676 tttatggacccgaacccgggtgatctatccatgaccaggatgaagcttgggtaaaaccaa 735 Query: 390 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 449 | ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 736 gtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaa 795 Query: 450 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 509 ||||||||||||| | ||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 796 atgccactcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggtta 855 Query: 510 actggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 568 | ||| | || ||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 856 aatgggctatttaggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatc 915 Query: 569 gaggcaaactctgaatac 586 || ||||||||||||||| Sbjct: 916 gatgcaaactctgaatac 933
>gb|AF355761.1| Rhizophora stylosa 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2894 Score = 585 bits (295), Expect = e-164 Identities = 356/375 (94%), Gaps = 6/375 (1%) Strand = Plus / Plus Query: 212 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 271 |||||| |||||||||||| || ||||||||| ||||||||||| ||||||||||||||| Sbjct: 581 ctctgaacgcgtgcctgtttaaaaatgagccg-cgactcataggaagtggcttggttaag 639 Query: 272 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 331 ||||| ||| ||||||||||||||||||||||||| |||||| |||||||||||| Sbjct: 640 ggaac-----ccaacggagccgtagcgaaagcgagtcttcgtagggcaattgtcactgct 694 Query: 332 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 391 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 695 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 754 Query: 392 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 451 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 755 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 814 Query: 452 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 511 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 815 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 874 Query: 512 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 571 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 875 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 934 Query: 572 gcaaactctgaatac 586 ||||||||||||||| Sbjct: 935 gcaaactctgaatac 949 Score = 289 bits (146), Expect = 5e-75 Identities = 187/200 (93%), Gaps = 3/200 (1%) Strand = Plus / Plus Query: 2 aagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 61 ||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 363 aagcatccctagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 422 Query: 62 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 121 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 423 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtaatacc 482 Query: 122 gtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctg 181 ||||||||| ||||||||||||||||| ||| ||||||||| ||| |||||||| | Sbjct: 483 gtgagggaagggtgaaaagaacccccatcggggagtgaaataaaacatgaaaccg---ta 539 Query: 182 agctcccaagcagtgggagg 201 |||||||||||||||||||| Sbjct: 540 agctcccaagcagtgggagg 559
>gb|AF393610.1| Spirogyra maxima large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2674 Score = 585 bits (295), Expect = e-164 Identities = 498/563 (88%), Gaps = 12/563 (2%) Strand = Plus / Plus Query: 25 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 84 |||||||||||||||||||||||||||||||||||||||||| |||||||||| | |||| Sbjct: 337 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcgaggaccacctcgtaagg 396 Query: 85 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 144 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 397 ctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacc 456 Query: 145 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 204 ||| ||| ||||||||||||| ||||||||| ||| |||||||||||||| || Sbjct: 457 cccgtaggggagtgaaatagaacatgaaaccgta---agcctacaagcagtgggaggaga 513 Query: 205 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 264 | |||||||||||||||||||||||||||||||||||||||| ||| | |||||| | Sbjct: 514 atagaatctctgaccgcgtgcctgttgaagaatgagccggcgacttataagtagtggcct 573 Query: 265 ggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgt 324 ||||||| ||| || ||||||||||||||||| |||| || | || || ||| Sbjct: 574 ggttaagagaat-------actggagccgtagcgaaagcaagtcatatttgg-cgcatgt 625 Query: 325 cactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaa 384 ||||| |||| |||||||||| |||||||||||||||| ||||| |||| ||||| |||| Sbjct: 626 cactgtttatagacccgaacccgggtgatctatccatggccagggtgaaacttgggtgaa 685 Query: 385 actaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggg 444 | ||| ||||||||||||||||||||||||| |||||||||||||| ||||||||||| Sbjct: 686 gccaagtggaggtccgaaccgactgatgttgaaaaatcagcggatgagctgtggttaggg 745 Query: 445 gtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagc 504 |||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||| Sbjct: 746 gtgaaatgccactcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagc 805 Query: 505 agttgactggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtacc 563 |||| ||||| | ||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 806 gattgattggactacttaggggtaaagcactgtttcggtgcgggctgcgaaagcggtacc 865 Query: 564 aaatcgaggcaaactctgaatac 586 ||||||||||||||||||||||| Sbjct: 866 aaatcgaggcaaactctgaatac 888
>gb|AF355763.1| Rhizophora apiculata 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2913 Score = 583 bits (294), Expect = e-163 Identities = 356/375 (94%), Gaps = 5/375 (1%) Strand = Plus / Plus Query: 212 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 271 |||||| ||||||||||||||| ||||| ||| ||| ||||| |||||||||||||||| Sbjct: 581 ctctgaacgcgtgcctgttgaaaaatgacccg-cgaatcataagcagtggcttggttaac 639 Query: 272 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 331 || ||||||||||||||||||||||||||||||||| |||||| |||||||||||| Sbjct: 640 gg----gaacccaccggagccgtagcgaaagcgagtcttcgtagggcaattgtcactgct 695 Query: 332 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 391 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 696 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 755 Query: 392 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 451 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 756 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 815 Query: 452 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 511 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 816 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 875 Query: 512 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 571 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 876 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 935 Query: 572 gcaaactctgaatac 586 ||||||||||||||| Sbjct: 936 gcaaactctgaatac 950 Score = 289 bits (146), Expect = 5e-75 Identities = 187/200 (93%), Gaps = 3/200 (1%) Strand = Plus / Plus Query: 2 aagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 61 ||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 363 aagcatccctagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 422 Query: 62 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 121 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 423 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtaatacc 482 Query: 122 gtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctg 181 ||||||||| ||||||||||||||||| || ||||||||||||| |||||||| | Sbjct: 483 gtgagggaagggtgaaaagaacccccatccgggagtgaaatagaacatgaaaccg---ta 539 Query: 182 agctcccaagcagtgggagg 201 |||||||||||||||||||| Sbjct: 540 agctcccaagcagtgggagg 559
>gb|AF393603.1| Nitella sp. CL-2002 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3349 Score = 569 bits (287), Expect = e-159 Identities = 501/569 (88%), Gaps = 5/569 (0%) Strand = Plus / Plus Query: 19 gctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccacctt 78 ||||| |||| ||||||||||| |||||| ||||||||||||||| || |||||||||| Sbjct: 380 gctctaacccaagtagcatgggacacgtgaaatcccgtgtgaatctgcgaggaccacctc 439 Query: 79 gcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa 138 ||||||||||||||| |||||| |||||||||||| ||||||||||||||||||||||| Sbjct: 440 gcaaggctaaatacttctgggtaaccgatagcgaaaaagtaccgtgagggaaaggtgaaa 499 Query: 139 agaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggg 198 |||||||||| ||| ||||||| ||||| ||||||||| ||| ||||||||||| Sbjct: 500 agaacccccataggggagtgaaaaagaacatgaaaccgtag---gctttcaagcagtggg 556 Query: 199 aggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcag 258 || ||| | |||| |||||||||||||||||||||||||||||||||||||||| || Sbjct: 557 agaagaattttatctttgaccgcgtgcctgttgaagaatgagccggcgactcatagatag 616 Query: 259 tggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggc 318 ||||| ||||||||||| | | || |||||| |||||||||| |||||| ||||| Sbjct: 617 tggctgggttaagggaatttatgc-actggagccatagcgaaagcaagtcttttcagggc 675 Query: 319 gattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttg 378 |||||||||| |||||||||||||| |||||||||| ||||| ||||||||||||||| Sbjct: 676 tattgtcactgtctatggacccgaacccgggtgatctaaccatggccaggatgaagcttg 735 Query: 379 gatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtgg 438 | |||||||||| ||||||| ||||||| ||||||||| |||| ||||||||| ||||| Sbjct: 736 ggtgaaactaagtggaggtcccaaccgaccgatgttgaaaaatcggcggatgagctgtgg 795 Query: 439 ttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgagg 498 |||| ||||||||||||||||||| | ||||||||||||||||||||||||||||||||| Sbjct: 796 ttagtggtgaaatgccactcgaactcggagctagctggttctccccgaaatgcgttgagg 855 Query: 499 cgcagcagttgactggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagc 557 ||||||| || ||||||| ||| |||||||||||||||||||||||||||||||| ||| Sbjct: 856 cgcagcaattaactggactatccaggggtaaagcactgtttcggtgcgggctgcgaaagc 915 Query: 558 ggtaccaaatcgaggcaaactctgaatac 586 |||||||||||||| |||||||||||||| Sbjct: 916 ggtaccaaatcgagacaaactctgaatac 944
>gb|AF355767.1| Bruguiera gymnorrhiza 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2867 Score = 565 bits (285), Expect = e-158 Identities = 327/341 (95%), Gaps = 5/341 (1%) Strand = Plus / Plus Query: 246 gactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcga 305 ||||||||| |||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 592 gactcatagtaagtggcttggttaagggaac-----ccaccggagccgtagcgaaagcga 646 Query: 306 gtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgacc 365 ||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 647 gtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccatgacc 706 Query: 366 aggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagc 425 |||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 707 aggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagc 766 Query: 426 ggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccg 485 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 767 ggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccg 826 Query: 486 aaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcg 545 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 827 aaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcg 886 Query: 546 ggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 586 ||| ||| ||||||||||||||||||||||||||||||||| Sbjct: 887 ggccgcgagagcggtaccaaatcgaggcaaactctgaatac 927 Score = 297 bits (150), Expect = 2e-77 Identities = 188/200 (94%), Gaps = 3/200 (1%) Strand = Plus / Plus Query: 2 aagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 61 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 363 aagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 422 Query: 62 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 121 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 423 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtactacc 482 Query: 122 gtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctg 181 ||||||||| ||||||||||||||||| ||| ||||||||| ||| |||||||| | Sbjct: 483 gtgagggaagggtgaaaagaacccccatcggggagtgaaataaaacatgaaaccg---ta 539 Query: 182 agctcccaagcagtgggagg 201 |||||||||||||||||||| Sbjct: 540 agctcccaagcagtgggagg 559
>gb|AF393586.1| Chara sp. CL-2002-2 small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 7651 Score = 563 bits (284), Expect = e-157 Identities = 513/586 (87%), Gaps = 5/586 (0%) Strand = Plus / Plus Query: 2 aagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 61 ||||| ||| ||||| ||||| |||| ||||||||||| |||| | ||||| ||||||| Sbjct: 4401 aagcaacacaagctttagctctaacccaagtagcatgggacacgggaaatcctgtgtgaa 4460 Query: 62 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 121 | || |||||||||| | |||||||||||||||||||| |||||||||||| |||||| Sbjct: 4461 tttgcgaggaccacctcgtaaggctaaatactcctgggtaaccgatagcgaaaaagtacc 4520 Query: 122 gtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctg 181 ||||||||||||||||||||||||||| ||| ||||||| ||||| ||||||||| Sbjct: 4521 gtgagggaaaggtgaaaagaacccccataggggagtgaaagagaacatgaaaccgtag-- 4578 Query: 182 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 241 || |||||||||||||| ||| |||| ||||||||||||||||||||||||||| Sbjct: 4579 -gccttcaagcagtgggaggagaattgtatctttgaccgcgtgcctgttgaagaatgagc 4637 Query: 242 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 301 |||||||||||||||||||||||||||||||||| | || ||||||||| |||||||| Sbjct: 4638 cggcgactcataggcagtggcttggttaagggaaattatcc-accggagccatagcgaaa 4696 Query: 302 gcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 361 || |||||| |||||| |||||||||| |||||||||||||| |||||||||| |||| Sbjct: 4697 gcaagtctttttagggctattgtcactgtctatggacccgaacccgggtgatctaaccat 4756 Query: 362 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 421 | |||||||||||||||| | |||||||| ||||||| ||||||| ||||||||| ||| Sbjct: 4757 ggccaggatgaagcttgggtaaaactaagtggaggtccaaaccgaccgatgttgaaaaat 4816 Query: 422 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 481 | ||||||||| ||||||||| ||||||||||||||||||| | |||||||||||||||| Sbjct: 4817 cggcggatgagctgtggttagtggtgaaatgccactcgaactcggagctagctggttctc 4876 Query: 482 cccgaaatgcgttgaggcgcagcagttgactggac-atctaggggtaaagcactgtttcg 540 |||||||||||||||||||||||| || |||| || ||| |||||||||||||||||||| Sbjct: 4877 cccgaaatgcgttgaggcgcagcaattaactgcactatccaggggtaaagcactgtttcg 4936 Query: 541 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 586 ||||||||| || || ||||||||||||||||||||||||||||| Sbjct: 4937 gtgcgggctacgaaagtggtaccaaatcgaggcaaactctgaatac 4982
>gb|AF393584.1| Chara sp. CL-2002-1 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3257 Score = 563 bits (284), Expect = e-157 Identities = 513/586 (87%), Gaps = 5/586 (0%) Strand = Plus / Plus Query: 2 aagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 61 ||||| ||| ||||| ||||| |||| ||||||||||| |||| | ||||| ||||||| Sbjct: 368 aagcaacacaagctttagctctaacccaagtagcatgggacacgggaaatcctgtgtgaa 427 Query: 62 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 121 | || |||||||||| | |||||||||||||||||||| |||||||||||| |||||| Sbjct: 428 tttgcgaggaccacctcgtaaggctaaatactcctgggtaaccgatagcgaaaaagtacc 487 Query: 122 gtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctg 181 ||||||||||||||||||||||||||| ||| ||||||| ||||| ||||||||| Sbjct: 488 gtgagggaaaggtgaaaagaacccccataggggagtgaaagagaacatgaaaccgtag-- 545 Query: 182 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 241 || |||||||||||||| ||| |||| ||||||||||||||||||||||||||| Sbjct: 546 -gccttcaagcagtgggaggagaattgtatctttgaccgcgtgcctgttgaagaatgagc 604 Query: 242 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 301 |||||||||||||||||||||||||||||||||| | || ||||||||| |||||||| Sbjct: 605 cggcgactcataggcagtggcttggttaagggaaattatcc-accggagccatagcgaaa 663 Query: 302 gcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 361 || |||||| |||||| |||||||||| |||||||||||||| |||||||||| |||| Sbjct: 664 gcaagtctttttagggctattgtcactgtctatggacccgaacccgggtgatctaaccat 723 Query: 362 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 421 | |||||||||||||||| | |||||||| ||||||| ||||||| ||||||||| ||| Sbjct: 724 ggccaggatgaagcttgggtaaaactaagtggaggtccaaaccgaccgatgttgaaaaat 783 Query: 422 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 481 | ||||||||| ||||||||| ||||||||||||||||||| | |||||||||||||||| Sbjct: 784 cggcggatgagctgtggttagtggtgaaatgccactcgaactcggagctagctggttctc 843 Query: 482 cccgaaatgcgttgaggcgcagcagttgactggac-atctaggggtaaagcactgtttcg 540 |||||||||||||||||||||||| || |||| || ||| |||||||||||||||||||| Sbjct: 844 cccgaaatgcgttgaggcgcagcaattaactgcactatccaggggtaaagcactgtttcg 903 Query: 541 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 586 ||||||||| || || ||||||||||||||||||||||||||||| Sbjct: 904 gtgcgggctacgaaagtggtaccaaatcgaggcaaactctgaatac 949
>gb|AF393579.1| Chara corallina large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3277 Score = 563 bits (284), Expect = e-157 Identities = 513/586 (87%), Gaps = 5/586 (0%) Strand = Plus / Plus Query: 2 aagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 61 ||||| ||| ||||| ||||| |||| ||||||||||| |||| | ||||| ||||||| Sbjct: 368 aagcaacacaagctttagctctaacccaagtagcatgggacacgggaaatcctgtgtgaa 427 Query: 62 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 121 | || |||||||||| | |||||||||||||||||||| |||||||||||| |||||| Sbjct: 428 tttgcgaggaccacctcgtaaggctaaatactcctgggtaaccgatagcgaaaaagtacc 487 Query: 122 gtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctg 181 ||||||||||||||||||||||||||| ||| ||||||| ||||| ||||||||| Sbjct: 488 gtgagggaaaggtgaaaagaacccccataggggagtgaaagagaacatgaaaccgtag-- 545 Query: 182 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 241 || |||||||||||||| ||| |||| ||||||||||||||||||||||||||| Sbjct: 546 -gccttcaagcagtgggaggagaattgtatctttgaccgcgtgcctgttgaagaatgagc 604 Query: 242 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 301 |||||||||||||||||||||||||||||||||| | || ||||||||| |||||||| Sbjct: 605 cggcgactcataggcagtggcttggttaagggaaattatcc-accggagccatagcgaaa 663 Query: 302 gcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 361 || |||||| |||||| |||||||||| |||||||||||||| |||||||||| |||| Sbjct: 664 gcaagtctttttagggctattgtcactgtctatggacccgaacccgggtgatctaaccat 723 Query: 362 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 421 | |||||||||||||||| | |||||||| ||||||| ||||||| ||||||||| ||| Sbjct: 724 ggccaggatgaagcttgggtaaaactaagtggaggtccaaaccgaccgatgttgaaaaat 783 Query: 422 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 481 | ||||||||| ||||||||| ||||||||||||||||||| | |||||||||||||||| Sbjct: 784 cggcggatgagctgtggttagtggtgaaatgccactcgaactcggagctagctggttctc 843 Query: 482 cccgaaatgcgttgaggcgcagcagttgactggac-atctaggggtaaagcactgtttcg 540 |||||||||||||||||||||||| || |||| || ||| |||||||||||||||||||| Sbjct: 844 cccgaaatgcgttgaggcgcagcaattaactgcactatccaggggtaaagcactgtttcg 903 Query: 541 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 586 ||||||||| || || ||||||||||||||||||||||||||||| Sbjct: 904 gtgcgggctacgaaagtggtaccaaatcgaggcaaactctgaatac 949
>dbj|AB061306.1| Citrus jambhiri mitochondrial ACRS gene for ACR toxin-sensitivity inducing protein, complete cds Length = 2303 Score = 563 bits (284), Expect = e-157 Identities = 371/398 (93%), Gaps = 9/398 (2%) Strand = Plus / Minus Query: 2 aagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 61 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 389 aagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 330 Query: 62 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 329 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 270 Query: 122 gtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctg 181 ||||||||| ||||||||||||||||| ||| ||||||||||||| |||||||| | Sbjct: 269 gtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---ta 213 Query: 182 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 241 |||||||||||||||||||| | | | |||||||||||||||||||||||||||||| Sbjct: 212 agctcccaagcagtgggaggagcccg-gggctctgaccgcgtgcctgttgaagaatgagc 154 Query: 242 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 301 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 153 cggcgactcataggcagtggcttggttaag-----ggaacccaccggagccgtagcgaaa 99 Query: 302 gcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 361 ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 98 gcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccat 39 Query: 362 gaccaggatgaagcttggatgaaactaagcagaggtcc 399 |||||||||||||||||| |||||||||| ||||||| Sbjct: 38 gaccaggatgaagcttgggtgaaactaagtggaggtcc 1
>gb|AF355765.1| Amaranthus hybridus 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2927 Score = 559 bits (282), Expect = e-156 Identities = 303/310 (97%) Strand = Plus / Plus Query: 277 ggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatgg 336 |||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| Sbjct: 602 ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatgg 661 Query: 337 acccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagagg 396 ||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| Sbjct: 662 acccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggagg 721 Query: 397 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 456 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 722 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 781 Query: 457 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 516 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 782 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 841 Query: 517 atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaa 576 |||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| Sbjct: 842 atctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaa 901 Query: 577 ctctgaatac 586 |||||||||| Sbjct: 902 ctctgaatac 911 Score = 285 bits (144), Expect = 8e-74 Identities = 192/206 (93%), Gaps = 4/206 (1%) Strand = Plus / Plus Query: 2 aagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 61 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 363 aagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 422 Query: 62 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 423 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 482 Query: 122 gtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctg 181 ||||||||| ||||||||||| ||||| ||| ||||||||| ||| |||||||| | Sbjct: 483 gtgagggaagggtgaaaagaa-ccccatcggggagtgaaataaaacatgaaaccg---ta 538 Query: 182 agctcccaagcagtgggaggggaaag 207 ||||| |||||||||||||| ||||| Sbjct: 539 agctctcaagcagtgggaggagaaag 564
>dbj|AK059835.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-206-C02, full insert sequence Length = 1395 Score = 539 bits (272), Expect = e-150 Identities = 275/276 (99%) Strand = Plus / Plus Query: 2 aagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 61 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 351 aagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 410 Query: 62 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 411 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 470 Query: 122 gtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctg 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 471 gtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctg 530 Query: 182 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 531 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 590 Query: 242 cggcgactcataggcagtggcttggttaagggaacg 277 |||||||||||||||||||||||||||||||||||| Sbjct: 591 cggcgactcataggcagtggcttggttaagggaacg 626
>gb|AY958086.1| Zygnema circumcarinatum chloroplast, complete genome Length = 165372 Score = 529 bits (267), Expect = e-147 Identities = 490/563 (87%), Gaps = 11/563 (1%) Strand = Plus / Plus Query: 25 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 84 |||||||||||||| |||||||| || | ||||||||||||| |||||||||| | |||| Sbjct: 784 acccgagtagcatgaggcacgtgaaacctcgtgtgaatcagcgaggaccacctcgtaagg 843 Query: 85 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 144 |||||||||||| ||||| |||||| |||| ||||||||||||||||||||||||||||| Sbjct: 844 ctaaatactcctaggtgatcgatagtgaagaagtaccgtgagggaaaggtgaaaagaacc 903 Query: 145 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 204 |||| ||| ||||||||||| ||||||||| |||| ||||||||||||| || Sbjct: 904 cccataggggagtgaaatagactatgaaaccgta---agcttacaagcagtgggagaaga 960 Query: 205 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 264 | | |||| ||||||||||||||||||||||||||||||||||| ||| |||||||| | Sbjct: 961 atctaatctttgaccgcgtgcctgttgaagaatgagccggcgacttataagcagtggcct 1020 Query: 265 ggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgt 324 ||||||||| | |||| |||||||||||||||||||| | |||||| ||| Sbjct: 1021 ggttaagggtat-------accgaagccgtagcgaaagcgagtcattcaagggcgcatgt 1073 Query: 325 cactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaa 384 ||||| ||||||||||||||| |||||||||||||||| ||||| |||||||||| |||| Sbjct: 1074 cactgtttatggacccgaacccgggtgatctatccatggccagggtgaagcttgggtgaa 1133 Query: 385 actaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggg 444 | ||| |||| |||||||||||| ||||||| || ||||||||||| ||||||||||| Sbjct: 1134 gccaagtggaggcccgaaccgactggtgttgaaaaaccagcggatgagctgtggttaggg 1193 Query: 445 gtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagc 504 |||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||| Sbjct: 1194 gtgaaatgccactcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagc 1253 Query: 505 agttgactggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtacc 563 |||||| || | ||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 1254 gattgactaaactgtttaggggtaaagcactgtttcggtgcgggctgcgaaagcggtacc 1313 Query: 564 aaatcgaggcaaactctgaatac 586 ||||||||||||||||||||||| Sbjct: 1314 aaatcgaggcaaactctgaatac 1336
>dbj|AK111158.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-176-H09, full insert sequence Length = 3614 Score = 529 bits (267), Expect = e-147 Identities = 273/275 (99%) Strand = Plus / Plus Query: 2 aagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 61 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 311 aagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 370 Query: 62 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 371 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 430 Query: 122 gtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctg 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 431 gtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctg 490 Query: 182 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 241 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 491 agctcccaagcagtgggaggggaaattgatctctgaccgcgtgcctgttgaagaatgagc 550 Query: 242 cggcgactcataggcagtggcttggttaagggaac 276 ||||||||||||||||||||||||||||||||||| Sbjct: 551 cggcgactcataggcagtggcttggttaagggaac 585
>dbj|AK060204.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-001-H12, full insert sequence Length = 1872 Score = 521 bits (263), Expect = e-145 Identities = 266/267 (99%) Strand = Plus / Plus Query: 2 aagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 61 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 224 aagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 283 Query: 62 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 284 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 343 Query: 122 gtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctg 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 344 gtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctg 403 Query: 182 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 404 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 463 Query: 242 cggcgactcataggcagtggcttggtt 268 ||||||||||||||||||||||||||| Sbjct: 464 cggcgactcataggcagtggcttggtt 490
>gb|AY330885.1| Cynomorium coccineum clone Cyno_16 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2716 Score = 515 bits (260), Expect = e-143 Identities = 490/562 (87%), Gaps = 11/562 (1%) Strand = Plus / Plus Query: 25 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 84 |||||||||||||||| || |||||||||||||||||||||||||||||||||| |||| Sbjct: 372 acccgagtagcatgggacatatggaatcccgtgtgaatcagcaaggaccaccttgaaagg 431 Query: 85 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 144 |||||||||| ||||||||| |||| |||||||||||||||||||| ||||||||||||| Sbjct: 432 ctaaatactcttgggtgaccaatagtgaagtagtaccgtgagggaagggtgaaaagaacc 491 Query: 145 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 204 |||| |||| |||||| |||||| ||||| | | ||| ||||||||||||||| || Sbjct: 492 cccattggggagtgaactagaacatgaaaacatat---gctaccaagcagtgggaggaga 548 Query: 205 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 264 || | |||||||| |||||| ||||||||||||| |||||||||||| | |||||| | Sbjct: 549 caggg--ctctgaccacgtgcccgttgaagaatgagtcggcgactcataagtagtggcct 606 Query: 265 ggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgt 324 |||||||| |||| ||||||||||| |||||||||| |||||| |||||| | ||| Sbjct: 607 ggttaagg----ggaa-ccaccggagccatagcgaaagcaagtcttcatagggaaaatgt 661 Query: 325 cactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaa 384 || ||||| ||||||||||| ||||||||||| |||||||||||||| | |||| | || Sbjct: 662 cattgcttgtggacccgaacttgggtgatctaaccatgaccaggatgcaatttggttaaa 721 Query: 385 actaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggg 444 |||||| | |||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 722 actaagtgggggtctgaaccgactgatgttgaagaatcagcggatgagttgtggttaggg 781 Query: 445 gtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagc 504 ||||||||||| ||||||||| ||||||||||||| ||||||||||| || ||||||||| Sbjct: 782 gtgaaatgccaatcgaacccaaagctagctggttcgccccgaaatgcatttaggcgcagc 841 Query: 505 agttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtacca 564 |||| || || ||||||||||||||||| ||||| |||||||| || ||||||||||| Sbjct: 842 agtt-accgggcatctaggggtaaagcattgttttggtgcgggtcacgagagcggtacca 900 Query: 565 aatcgaggcaaactctgaatac 586 ||| |||||| ||| ||||||| Sbjct: 901 aattgaggcagactatgaatac 922
>gb|AF525938.2| Casuarina equisetifolia 23S ribosomal RNA and 4.5S ribosomal RNA genes, complete sequence; chloroplast Length = 3069 Score = 513 bits (259), Expect = e-142 Identities = 322/339 (94%), Gaps = 8/339 (2%) Strand = Plus / Plus Query: 252 taggcagtggcttggttaa-gggaacggaacccaccggagccgtagcgaaagcgagtctt 310 ||||||||||||||||||| |||||| ||||||||| |||||||||||||||||||| Sbjct: 613 taggcagtggcttggttaaagggaac----cccaccggaaccgtagcgaaagcgagtctt 668 Query: 311 aatagggcgattgtcactgcttatggacccgaacct--gggtgatctatccatgaccagg 368 ||||||| |||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 669 catagggcaattgtcactgcttatggacccgaaccctggggtgatctatccatgaccagg 728 Query: 369 atgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcgga 428 ||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 729 atgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcgga 788 Query: 429 tgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct-ccccgaa 487 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 789 tgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcccccgaa 848 Query: 488 atgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcggg 547 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 849 atgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcggg 908 Query: 548 ctgcgcgagcggtaccaaatcgaggcaaactctgaatac 586 | ||| ||||||||||||||||||||||||||||||||| Sbjct: 909 ccgcgagagcggtaccaaatcgaggcaaactctgaatac 947 Score = 220 bits (111), Expect = 4e-54 Identities = 139/146 (95%), Gaps = 3/146 (2%) Strand = Plus / Plus Query: 2 aagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 61 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 352 aagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 411 Query: 62 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 121 |||||||||||||||||||||||||||||||| | |||||||||||| ||||||||||| Sbjct: 412 tcagcaaggaccaccttgcaaggctaaatactac--ggtgaccgatagtgaagtagtacc 469 Query: 122 gtgagggaaaggtgaaaagaaccccc 147 ||||||||| |||| ||||||||||| Sbjct: 470 gtgagggaagggtg-aaagaaccccc 494
>dbj|AB064524.1| Physcomitrella patens subsp. patens chloroplast genes for tRNA-Ile(GAU), tRNA-Ala(UGC), 23S rRNA, partial sequence Length = 2767 Score = 482 bits (243), Expect = e-133 Identities = 332/361 (91%), Gaps = 8/361 (2%) Strand = Plus / Plus Query: 17 atgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccacc 76 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2415 atgctctaacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccacc 2474 Query: 77 ttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtga 136 ||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 2475 ttgtaaggctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtga 2534 Query: 137 aaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtg 196 |||||||||||| ||| ||||||||||||| |||||||| | ||||||||||||||| Sbjct: 2535 aaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtg 2591 Query: 197 ggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggc 256 ||||| ||| |||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 2592 ggaggagaatcgaatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggt 2651 Query: 257 agtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagg 316 |||||| |||||||| |||||||||||||||||||||||||||||||||| |||| Sbjct: 2652 agtggcctggttaag-----ggaacccaccggagccgtagcgaaagcgagtcttcctagg 2706 Query: 317 gcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagct 376 || ||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 2707 gcaattgtcactacttatggacccgaacctgggtgatctaaccatgaccaggatgaagct 2766 Query: 377 t 377 | Sbjct: 2767 t 2767
>gb|AF393594.1| Coleochaete scutata large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2886 Score = 470 bits (237), Expect = e-129 Identities = 341/373 (91%), Gaps = 7/373 (1%) Strand = Plus / Plus Query: 215 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 274 ||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||| Sbjct: 567 tgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcatggttaaggga 626 Query: 275 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 334 | |||||| |||| |||||||||| |||||| |||||||||||||||| |||| Sbjct: 627 at-----ccaccgaagccatagcgaaagcaagtctttc-agggcgattgtcactgtttat 680 Query: 335 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcaga 394 ||||||||||| ||||||||||||||||||||||||||||||||| |||||| ||| || Sbjct: 681 ggacccgaacccgggtgatctatccatgaccaggatgaagcttgggtgaaaccaagtgga 740 Query: 395 ggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcc 454 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 741 ggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatgcc 800 Query: 455 actcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactgg 514 |||||||| | ||||||||||||||||||||||||||||||||||||||| ||| | ||| Sbjct: 801 actcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggttaaatgg 860 Query: 515 ac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggc 573 | || ||||||||||||||||||||||||||||||||| |||||||||||||||| || Sbjct: 861 gctatttaggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgatgc 920 Query: 574 aaactctgaatac 586 ||||||||||||| Sbjct: 921 aaactctgaatac 933 Score = 194 bits (98), Expect = 2e-46 Identities = 134/146 (91%) Strand = Plus / Plus Query: 30 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 89 ||||| ||||| |||||| |||||| | |||||||||||||||||||||| ||||||||| Sbjct: 385 agtagtatgggacacgtgaaatcccttatgaatcagcaaggaccaccttgtaaggctaaa 444 Query: 90 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 149 |||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||| Sbjct: 445 tactcctgggtgaccgatagtgaagaagtaccgtgagggaaaggtgaaaagaacccccat 504 Query: 150 tgggtagtgaaatagaacgtgaaacc 175 ||| ||||||||||||| ||||||| Sbjct: 505 aggggagtgaaatagaacatgaaacc 530
>gb|AF393593.1| Coleochaete orbicularis small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 6131 Score = 470 bits (237), Expect = e-129 Identities = 341/373 (91%), Gaps = 7/373 (1%) Strand = Plus / Plus Query: 215 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 274 ||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||| Sbjct: 3601 tgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcatggttaaggga 3660 Query: 275 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 334 | |||||| |||| |||||||||| |||||| |||||||||||||||| |||| Sbjct: 3661 at-----ccaccgaagccatagcgaaagcaagtctttc-agggcgattgtcactgtttat 3714 Query: 335 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcaga 394 ||||||||||| ||||||||||||||||||||||||||||||||| |||||| ||| || Sbjct: 3715 ggacccgaacccgggtgatctatccatgaccaggatgaagcttgggtgaaaccaagtgga 3774 Query: 395 ggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcc 454 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 3775 ggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatgcc 3834 Query: 455 actcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactgg 514 |||||||| | ||||||||||||||||||||||||||||||||||||||| ||| | ||| Sbjct: 3835 actcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggttaaatgg 3894 Query: 515 ac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggc 573 | || ||||||||||||||||||||||||||||||||| |||||||||||||||| || Sbjct: 3895 gctatttaggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgatgc 3954 Query: 574 aaactctgaatac 586 ||||||||||||| Sbjct: 3955 aaactctgaatac 3967 Score = 194 bits (98), Expect = 2e-46 Identities = 134/146 (91%) Strand = Plus / Plus Query: 30 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 89 ||||| ||||| |||||| |||||| | |||||||||||||||||||||| ||||||||| Sbjct: 3419 agtagtatgggacacgtgaaatcccttatgaatcagcaaggaccaccttgtaaggctaaa 3478 Query: 90 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 149 |||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||| Sbjct: 3479 tactcctgggtgaccgatagtgaagaagtaccgtgagggaaaggtgaaaagaacccccat 3538 Query: 150 tgggtagtgaaatagaacgtgaaacc 175 ||| ||||||||||||| ||||||| Sbjct: 3539 aggggagtgaaatagaacatgaaacc 3564
>gb|L49153.1|MIXCPRGOL Microthamnion kuetzingianum large-subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2622 Score = 450 bits (227), Expect = e-123 Identities = 481/559 (86%), Gaps = 15/559 (2%) Strand = Plus / Plus Query: 26 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 85 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 355 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 414 Query: 86 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaa-gaacc 144 ||||||||||||||| |||||||| ||||||||||||||||||||||||||||| ||||| Sbjct: 415 taaatactcctgggtaaccgatagtgaagtagtaccgtgagggaaaggtgaaaaagaacc 474 Query: 145 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 204 || | ||| ||||||| ||||| ||||||| || |||| |||||||||||||| | Sbjct: 475 cctggaggggagtgaaaaagaacatgaaacc---ctaagctgacaagcagtgggagg--a 529 Query: 205 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 264 | | |||||||||||||||||||||||||||||||||||||| || | |||||||| Sbjct: 530 cttttaagtctgaccgcgtgcctgttgaagaatgagccggcgactcctaagaagtggctt 589 Query: 265 ggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcga--tt 322 ||||||||| ||| | ||| |||| ||||||||| ||||| |||||||| | | Sbjct: 590 ggttaaggg---ggattac-ccgaagccaaagcgaaagcaagtctgaatagggcaaaatc 645 Query: 323 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 382 |||||| ||| ||||||||||| |||||||||| ||||| |||||||||||||||| | Sbjct: 646 gtcactttttagggacccgaacccgggtgatctaaccatggccaggatgaagcttgggta 705 Query: 383 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 442 |||| ||| ||||||||||||||| ||||||||| |||| ||||||||| ||||||||| Sbjct: 706 aaaccaagtggaggtccgaaccgaccgatgttgaaaaatcggcggatgagctgtggttag 765 Query: 443 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 502 ||||||||||||| |||||| | ||||||||||||||||||||||||||||||||||||| Sbjct: 766 gggtgaaatgccaatcgaactcggagctagctggttctccccgaaatgcgttgaggcgca 825 Query: 503 gcagtt---gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcgg 559 || ||| ||| || |||||||||||||||||||||||||||||||| || || || Sbjct: 826 gcggttggcgacgggctgtctaggggtaaagcactgtttcggtgcgggctacgaaagtgg 885 Query: 560 taccaaatcgaggcaaact 578 |||||||||| ||||||| Sbjct: 886 taccaaatcgtagcaaact 904
>emb|AJ318074.1|CSA318074 Cucumis sativus chloroplast ccsA gene, ndhD gene (partial), 4.5S rRNA gene, 23S rRNA gene (partial) and 5S rRNA gene Length = 6689 Score = 420 bits (212), Expect = e-114 Identities = 267/284 (94%), Gaps = 6/284 (2%) Strand = Plus / Plus Query: 212 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc-ttggttaa 270 |||||||||||||||||||||||||||||||||||||||||| || | |||||||| Sbjct: 20 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataacggatgacgttggttaa 79 Query: 271 gggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 330 | |||||||||||||||||||||||||||||||||| ||||||| ||||||||||| Sbjct: 80 g-----ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgc 134 Query: 331 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 390 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 135 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 194 Query: 391 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 450 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 195 tggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 254 Query: 451 tgccactcgaacccagagctagctggttctccccgaaatgcgtt 494 |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 255 tgccactcgaacccagagctagctggttctccccgaaatgcgtt 298 Score = 133 bits (67), Expect = 7e-28 Identities = 73/75 (97%) Strand = Plus / Plus Query: 512 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 571 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 317 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 376 Query: 572 gcaaactctgaatac 586 ||||||||||||||| Sbjct: 377 gcaaactctgaatac 391
>gb|AY330874.1| Cynomorium coccineum clone Cyno_5 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2737 Score = 408 bits (206), Expect = e-111 Identities = 335/375 (89%), Gaps = 6/375 (1%) Strand = Plus / Plus Query: 212 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 271 ||||||| |||| ||||||||||||||||||||||||||||| | ||||||||||||||| Sbjct: 566 ctctgactgcgttcctgttgaagaatgagccggcgactcataagtagtggcttggttaag 625 Query: 272 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 331 | |||| ||||||||| | |||||||||| |||||| ||||||| | ||||| |||| Sbjct: 626 g----ggaa-ccaccggagtcatagcgaaagcaagtcttcatagggcaaatgtcattgct 680 Query: 332 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 391 ||||||||||||| ||||||||||| ||||||||| |||||| |||| |||||||||| Sbjct: 681 tatggacccgaacttgggtgatctaaccatgaccaagatgaaatttggttgaaactaagt 740 Query: 392 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 451 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 741 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 800 Query: 452 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 511 |||| || |||||| |||||| ||||||||||||||||||||| |||||||| |||| || Sbjct: 801 gccaatcaaacccaaagctagttggttctccccgaaatgcgtttaggcgcagaagtt-ac 859 Query: 512 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 571 ||||||||||||||||||||||||||||| |||| ||| |||| ||||||||| ||| Sbjct: 860 cagacatctaggggtaaagcactgtttcggttcgggtcgcgagagccgtaccaaattgag 919 Query: 572 gcaaactctgaatac 586 ||||||| ||||||| Sbjct: 920 gcaaactatgaatac 934 Score = 222 bits (112), Expect = 1e-54 Identities = 154/168 (91%) Strand = Plus / Plus Query: 6 atcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcag 65 |||| ||||||||||| |||| ||||||||||||| |||||||||||||||||||||||| Sbjct: 365 atcattagcttatgctttgactcgagtagcatgggacacgtggaatcccgtgtgaatcag 424 Query: 66 caaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtga 125 |||||| |||||||||||||||||||||| ||||||||| |||| ||||||||||||||| Sbjct: 425 caaggatcaccttgcaaggctaaatactcttgggtgaccaatagtgaagtagtaccgtga 484 Query: 126 gggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaa 173 ||||| ||||||||||||| | | |||| ||||||||||||| ||||| Sbjct: 485 gggaagggtgaaaagaacctctactggggagtgaaatagaacatgaaa 532
>emb|AJ538560.1|NTA538560 Nicotiana tabacum cDNA-AFLP-fragment BC3-M22-001 Length = 501 Score = 402 bits (203), Expect = e-109 Identities = 253/268 (94%), Gaps = 5/268 (1%) Strand = Plus / Plus Query: 2 aagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 235 aagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 294 Query: 62 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 295 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 354 Query: 122 gtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctg 181 ||||||||| ||||||||||||||||| ||| ||||||||||||| |||||||| | Sbjct: 355 gtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---ta 411 Query: 182 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 241 |||||||||||||||||||| | || | |||||||||||||||||||||||||||||| Sbjct: 412 agctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagc 469 Query: 242 cggcgactcataggcagtggcttggtta 269 |||||||||||||||||||||||||||| Sbjct: 470 cggcgactcataggcagtggcttggtta 497
>emb|AJ538655.1|NTA538655 Nicotiana tabacum cDNA-AFLP-fragment BC34-M2-001 Length = 512 Score = 389 bits (196), Expect = e-105 Identities = 249/265 (93%), Gaps = 5/265 (1%) Strand = Plus / Minus Query: 2 aagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 260 aagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 201 Query: 62 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 121 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 200 tcagcaaggaccgccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 141 Query: 122 gtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctg 181 ||||||||| ||||||||||||||||| ||| ||||||||||||| |||||||| | Sbjct: 140 gtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---ta 84 Query: 182 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 241 |||||||||||||||||||| | || | |||||||||||||||||||||||||||||| Sbjct: 83 agctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagc 26 Query: 242 cggcgactcataggcagtggcttgg 266 ||||||||||||||||||||||||| Sbjct: 25 cggcgactcataggcagtggcttgg 1
>gb|DQ160136.1| Taraxacum officinale To110-2 mRNA, partial sequence Length = 282 Score = 385 bits (194), Expect = e-103 Identities = 248/264 (93%), Gaps = 4/264 (1%) Strand = Plus / Plus Query: 2 aagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 61 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19 aagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 78 Query: 62 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 79 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 138 Query: 122 gtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctg 181 ||||||||| ||||||||||||||||| ||| ||||||||||||| |||||||| | Sbjct: 139 gtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---ta 195 Query: 182 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 241 |||||||||||||||||||||| | | |||||||||||||||||||||||||||||| Sbjct: 196 agctcccaagcagtgggaggggcccg-gggctctgaccgcgtgcctgttgaagaatgagc 254 Query: 242 cggcgactcataggcagtggcttg 265 |||||||||||||||||||||||| Sbjct: 255 cggcgactcataggcagtggcttg 278
>gb|L42848.1|NEHCPRGOL Parietochloris pseudoalveolaris large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2834 Score = 371 bits (187), Expect = 2e-99 Identities = 327/370 (88%), Gaps = 9/370 (2%) Strand = Plus / Plus Query: 214 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggg 273 |||||||||||||||||||||||||||||||||||| ||| |||||||||||||||| Sbjct: 629 ctgaccgcgtgcctgttgaagaatgagccggcgacttataaaaagtggcttggttaagga 688 Query: 274 aacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt--gtcactgct 331 ||| | |||||||| ||||||||| |||||||||||||||||| |||||| | Sbjct: 689 ----gaatcatccggagccagagcgaaagcaagtcttaatagggcgattttgtcactttt 744 Query: 332 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 391 |||||||||||||| |||||||||| |||||||||||||||||||||| | |||| ||| Sbjct: 745 tatggacccgaacccgggtgatctaaccatgaccaggatgaagcttgggtaaaaccaagt 804 Query: 392 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 451 || |||||||||||| ||||||||| |||| |||||||||||||||||||||||||||| Sbjct: 805 ggaagtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttaggggtgaaat 864 Query: 452 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga- 510 |||| |||||||| ||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 865 gccaatcgaacccggagctagctggttctccccgaaatgcgttgaggcgcagcggttgat 924 Query: 511 -ctg-gacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 568 || | ||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 925 gttgagctgtctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatc 984 Query: 569 gaggcaaact 578 | ||||||| Sbjct: 985 gtagcaaact 994 Score = 184 bits (93), Expect = 2e-43 Identities = 139/153 (90%), Gaps = 1/153 (0%) Strand = Plus / Plus Query: 26 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 85 |||||||||||||||||||||| |||||||||||||||| | |||||||||| | ||||| Sbjct: 446 cccgagtagcatggggcacgtgaaatcccgtgtgaatcaacgaggaccacctcgtaaggc 505 Query: 86 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg-aaaagaacc 144 |||||||||||| ||||||||||||||| ||||||||||||||||||||| |||||| || Sbjct: 506 taaatactcctgagtgaccgatagcgaactagtaccgtgagggaaaggtgaaaaagatcc 565 Query: 145 cccagtgggtagtgaaatagaacgtgaaaccgt 177 ||| ||| ||||||||||||| ||||||||| Sbjct: 566 cccgtagggaagtgaaatagaacatgaaaccgt 598
>emb|Z18289.1|PPC16SRNA Palmaria palmata Chloroplast for 16SrRNA gene Length = 4870 Score = 363 bits (183), Expect = 4e-97 Identities = 475/564 (84%), Gaps = 10/564 (1%) Strand = Plus / Plus Query: 26 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 85 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 2137 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 2196 Query: 86 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 145 |||||| ||||| |||||||||| ||| ||||||| || ||||||||||||||||| Sbjct: 2197 taaatattcctgaatgaccgatagtgaaacagtaccgcgatttaaaggtgaaaagaaccc 2256 Query: 146 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 205 | | ||| ||||||||||||| ||||||||| |||| |||||||||||||| | Sbjct: 2257 cgggaggggagtgaaatagaacatgaaaccgta---agcttacaagcagtgggaggacga 2313 Query: 206 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttg 265 | | ||||||| ||||| ||||||||||||||||||||||| || |||||||| | Sbjct: 2314 cttaacgtctgacctcgtgcatgttgaagaatgagccggcgacttgtatgcagtggca-g 2372 Query: 266 gttaagg-gaacggaacccaccggagccgtagcgaaagcgagtcttaatagg-gcgattg 323 ||||||| | | ||| ||||||||| ||| ||||||||| ||| ||| | ||| | | Sbjct: 2373 gttaaggcgtaaagaat--accggagccatagtgaaagcgag-cttgataagagcgttcg 2429 Query: 324 tcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatga 383 |||||| ||| |||||||||| || ||||||| |||| ||||| |||||||| | | | Sbjct: 2430 tcactgtttacagacccgaacccggatgatctagtcatggccagggtgaagcttaggtaa 2489 Query: 384 aactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttagg 443 |||||| ||||||||||||||||||||||||| ||||||||||||||||||| ||||| Sbjct: 2490 cactaagtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtgattagg 2549 Query: 444 ggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcag 503 |||||||||||| ||||| || ||||||||||||||||||||||||||||| ||||||| Sbjct: 2550 ggtgaaatgccaatcgaatccggagctagctggttctccccgaaatgcgttttggcgcag 2609 Query: 504 cagttgactggacatc-taggggtaaagcactgtttcggtgcgggctgcgcgagcggtac 562 | ||||| | | | ||||||||||||||||||||||| ||||||| | |||||||| Sbjct: 2610 cggttgatgctatagcttaggggtaaagcactgtttcggtacgggctgtgaaagcggtac 2669 Query: 563 caaatcgaggcaaactctgaatac 586 |||||||||||||||||||||||| Sbjct: 2670 caaatcgaggcaaactctgaatac 2693
>gb|L42993.1|URMCPRGOL Uronema belkae large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2619 Score = 345 bits (174), Expect = 1e-91 Identities = 405/478 (84%), Gaps = 13/478 (2%) Strand = Plus / Plus Query: 26 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 85 ||||||||||||||||||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 430 Query: 86 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 145 |||||||||||| ||||||||||||||| |||||||| |||||||||| ||||||||||| Sbjct: 431 taaatactcctgagtgaccgatagcgaaatagtaccgcgagggaaaggagaaaagaaccc 490 Query: 146 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 205 || | ||| |||||||||||||| |||||||| | ||| |||||||||||| |||| Sbjct: 491 ccggaggggagtgaaatagaacgcgaaaccgtcc---gctgacaagcagtggga--ggaa 545 Query: 206 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttg 265 ||| ||||||||||||||||||||||||||||||||||||| ||||| ||||||||| Sbjct: 546 gaagat-tctgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggcttg 604 Query: 266 gttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggc---gatt 322 ||||||| | | | |||||||| |||||||||||||||| |||||||| || Sbjct: 605 gttaaggaa----attcatccggagccatagcgaaagcgagtctgaatagggcattaatg 660 Query: 323 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 382 |||||| |||||||||||||||| || ||||||||||||| |||| |||||| | | | Sbjct: 661 gtcacttcttatggacccgaaccgggatgatctatccatggccagattgaagcgttggta 720 Query: 383 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 442 ||||| | ||| ||||||||| ||||||||| |||| ||||||||||||||| ||| Sbjct: 721 aaacttcgtgaaggatcgaaccgaccgatgttgaaaaatcggcggatgagttgtggatag 780 Query: 443 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcg 500 || ||||| || ||||| || ||||||||||| |||| ||||||| ||||||||| Sbjct: 781 cggagaaattcctatcgaatcccgagctagctggatctctccgaaatttgttgaggcg 838 Score = 52.0 bits (26), Expect = 0.002 Identities = 57/66 (86%), Gaps = 1/66 (1%) Strand = Plus / Plus Query: 522 ggggtaaagc-actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 580 |||||||||| || |||||||||||||||||| ||||||||||| ||| | | ||||| Sbjct: 862 ggggtaaagctaccgtttcggtgcgggctgcgaaagcggtaccaagtcgtgacgaactca 921 Query: 581 gaatac 586 |||||| Sbjct: 922 gaatac 927
>dbj|AP004610.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1109A06 Length = 171438 Score = 333 bits (168), Expect = 4e-88 Identities = 174/176 (98%) Strand = Plus / Minus Query: 120 ccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgc 179 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 108050 ccgtgagggaaaggtgaaaagaacccccagtgggtaatgaaatagaacgtgaaaccgtgc 107991 Query: 180 tgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatga 239 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107990 tgagctcccaaccagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatga 107931 Query: 240 gccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgta 295 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107930 gccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgta 107875
>gb|L42846.1|GLZCPRGOL Gloeotilopsis sterilis large subunit ribosomal RNA gene, partial sequence; chloroplast Length = 2661 Score = 331 bits (167), Expect = 2e-87 Identities = 269/300 (89%), Gaps = 6/300 (2%) Strand = Plus / Plus Query: 285 ccggagccgtagcgaaagcgagtcttaatagggcgatt--gtcactgcttatggacccga 342 |||||||| ||||||||||||||| |||||||| || |||||| |||||||||||| Sbjct: 632 ccggagccaaagcgaaagcgagtctgaatagggcacttttgtcactttttatggacccga 691 Query: 343 acctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaa 402 ||| |||||||||| |||||||||||||||||||||| | |||| ||| |||||||||| Sbjct: 692 acccgggtgatctaaccatgaccaggatgaagcttgggtaaaaccaagtggaggtccgaa 751 Query: 403 ccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaac 462 ||||| ||||||||| |||| |||||||||||||||||||||||||||||||| |||||| Sbjct: 752 ccgaccgatgttgaaaaatcggcggatgagttgtggttaggggtgaaatgccaatcgaac 811 Query: 463 ccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac---tggac-at 518 | ||||||||||||||||||||||||||||||||||||||| |||||| ||| | || Sbjct: 812 tcggagctagctggttctccccgaaatgcgttgaggcgcagcggttgacgaatgggctat 871 Query: 519 ctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaact 578 |||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||| Sbjct: 872 ctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgtagcaaact 931 Score = 153 bits (77), Expect = 8e-34 Identities = 135/153 (88%), Gaps = 1/153 (0%) Strand = Plus / Plus Query: 26 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 85 ||||||||||||||| |||||| |||||||||||||||| | |||||||||| | ||||| Sbjct: 377 cccgagtagcatgggacacgtgaaatcccgtgtgaatcaacgaggaccacctcgtaaggc 436 Query: 86 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg-aaaagaacc 144 |||||||||||| |||||| |||||||| |||||||| |||||||||||| ||||||||| Sbjct: 437 taaatactcctgagtgaccaatagcgaaatagtaccgcgagggaaaggtgaaaaagaacc 496 Query: 145 cccagtgggtagtgaaatagaacgtgaaaccgt 177 || ||| ||||||| ||||| ||||||||| Sbjct: 497 cctgtaggggagtgaaaaagaacatgaaaccgt 529 Score = 83.8 bits (42), Expect = 6e-13 Identities = 54/58 (93%) Strand = Plus / Plus Query: 215 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 272 ||||||||| ||||||||||||||||||||||||| |||| |||||||||||||||| Sbjct: 566 tgaccgcgttcctgttgaagaatgagccggcgacttatagaaagtggcttggttaagg 623
>gb|L49150.1|NCHCPRGOL Chlorosarcina brevispinosa chloroplast large subunit ribosomal RNA (rrnL) gene Length = 7514 Score = 327 bits (165), Expect = 2e-86 Identities = 318/366 (86%), Gaps = 6/366 (1%) Strand = Plus / Plus Query: 215 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 274 ||||||| ||||||||||||||||||||||||||| ||| |||||||||||||||| | Sbjct: 714 tgaccgcatgcctgttgaagaatgagccggcgacttataaagagtggcttggttaaggaa 773 Query: 275 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 334 | | || |||||| ||||||||| |||||||||||||| |||||| |||| Sbjct: 774 aaaaatcc----ggagccaaagcgaaagcaagtcttaatagggctcaggtcactctttat 829 Query: 335 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcaga 394 ||||||||||| |||||||||| |||||||||||||||||||| | | |||| || || Sbjct: 830 ggacccgaacccgggtgatctaaccatgaccaggatgaagcttcggtaaaacggagtgga 889 Query: 395 ggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcc 454 |||||||||||| ||||||||| |||| ||||||||||||||||||||||||||||||| Sbjct: 890 agtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttaggggtgaaatgcc 949 Query: 455 actcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac-tg 513 | |||||| | ||||||||||||||||||||||||||||||||||||||| ||| || || Sbjct: 950 aatcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggttaacgtg 1009 Query: 514 gac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgagg 572 | | ||||||||||||||||||||||||||||||||||| |||||||||||||||| | Sbjct: 1010 ggcggtctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgtag 1069 Query: 573 caaact 578 |||||| Sbjct: 1070 caaact 1075 Score = 176 bits (89), Expect = 5e-41 Identities = 138/153 (90%), Gaps = 1/153 (0%) Strand = Plus / Plus Query: 26 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 85 |||||||||||||||||||||| ||||||||||||||| | |||||||||| | ||||| Sbjct: 527 cccgagtagcatggggcacgtgaaatcccgtgtgaatccacgaggaccacctcgtaaggc 586 Query: 86 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 145 |||||||||||||||||||||||| ||| |||||||| |||||||||||||||| | || Sbjct: 587 taaatactcctgggtgaccgatagtgaaatagtaccgcgagggaaaggtgaaaaagaacc 646 Query: 146 ccagt-gggtagtgaaatagaacgtgaaaccgt 177 ||||| ||| ||||||||||||| ||||||||| Sbjct: 647 ccagtcggggagtgaaatagaacatgaaaccgt 679
>gb|U30821.1|CPU30821 Cyanophora paradoxa cyanelle, complete genome Length = 135599 Score = 319 bits (161), Expect = 6e-84 Identities = 326/376 (86%), Gaps = 5/376 (1%) Strand = Plus / Minus Query: 213 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 272 |||||| |||||||||||||||||||||||||||||| ||||| |||||| |||||||| Sbjct: 114870 tctgactgcgtgcctgttgaagaatgagccggcgacttataggtagtggca-ggttaagg 114812 Query: 273 gaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt-gtcactgct 331 || | | || |||||| |||||||||||||| | |||| ||| || |||||| | Sbjct: 114811 taaagaatt--actggagccctagcgaaagcgagtttgtatagagcgttttgtcactatt 114754 Query: 332 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 391 ||| |||||||||| |||||||||| ||||| ||||| |||||||||| | |||||||| Sbjct: 114753 tatagacccgaacccgggtgatctaaccatggccagggtgaagcttgggtaaaactaagt 114694 Query: 392 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 451 |||| |||||| || | |||||||| ||| | ||||||||||||||||||||||||||| Sbjct: 114693 ggaggcccgaactgattaatgttgaaaaattaccggatgagttgtggttaggggtgaaat 114634 Query: 452 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 511 |||| |||||||| ||||||||||||||||||||||||| ||||||||||||| ||||| Sbjct: 114633 gccaatcgaacccggagctagctggttctccccgaaatgtgttgaggcgcagcggttgag 114574 Query: 512 tggacatc-taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcga 570 | | | ||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 114573 attataacttaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcga 114514 Query: 571 ggcaaactctgaatac 586 |||||||||||||||| Sbjct: 114513 ggcaaactctgaatac 114498 Score = 319 bits (161), Expect = 6e-84 Identities = 326/376 (86%), Gaps = 5/376 (1%) Strand = Plus / Plus Query: 213 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 272 |||||| |||||||||||||||||||||||||||||| ||||| |||||| |||||||| Sbjct: 2647 tctgactgcgtgcctgttgaagaatgagccggcgacttataggtagtggca-ggttaagg 2705 Query: 273 gaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt-gtcactgct 331 || | | || |||||| |||||||||||||| | |||| ||| || |||||| | Sbjct: 2706 taaagaatt--actggagccctagcgaaagcgagtttgtatagagcgttttgtcactatt 2763 Query: 332 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 391 ||| |||||||||| |||||||||| ||||| ||||| |||||||||| | |||||||| Sbjct: 2764 tatagacccgaacccgggtgatctaaccatggccagggtgaagcttgggtaaaactaagt 2823 Query: 392 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 451 |||| |||||| || | |||||||| ||| | ||||||||||||||||||||||||||| Sbjct: 2824 ggaggcccgaactgattaatgttgaaaaattaccggatgagttgtggttaggggtgaaat 2883 Query: 452 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 511 |||| |||||||| ||||||||||||||||||||||||| ||||||||||||| ||||| Sbjct: 2884 gccaatcgaacccggagctagctggttctccccgaaatgtgttgaggcgcagcggttgag 2943 Query: 512 tggacatc-taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcga 570 | | | ||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 2944 attataacttaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcga 3003 Query: 571 ggcaaactctgaatac 586 |||||||||||||||| Sbjct: 3004 ggcaaactctgaatac 3019 Score = 153 bits (77), Expect = 8e-34 Identities = 135/153 (88%), Gaps = 1/153 (0%) Strand = Plus / Minus Query: 26 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 85 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 115053 cccgagtagcatggggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaaggc 114994 Query: 86 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 145 |||||| ||||| |||||||||||| | |||||||||||||||||||||||||||||| Sbjct: 114993 taaatattcctgaatgaccgatagcgcaacagtaccgtgagggaaaggtgaaaagaaccc 114934 Query: 146 ccagt-gggtagtgaaatagaacgtgaaaccgt 177 | | ||| |||||||||||| ||||||||| Sbjct: 114933 cgggcaggggagtgaaatagaatatgaaaccgt 114901 Score = 153 bits (77), Expect = 8e-34 Identities = 135/153 (88%), Gaps = 1/153 (0%) Strand = Plus / Plus Query: 26 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 85 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 2464 cccgagtagcatggggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaaggc 2523 Query: 86 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 145 |||||| ||||| |||||||||||| | |||||||||||||||||||||||||||||| Sbjct: 2524 taaatattcctgaatgaccgatagcgcaacagtaccgtgagggaaaggtgaaaagaaccc 2583 Query: 146 ccagt-gggtagtgaaatagaacgtgaaaccgt 177 | | ||| |||||||||||| ||||||||| Sbjct: 2584 cgggcaggggagtgaaatagaatatgaaaccgt 2616
>gb|AF393601.1| Mesotaenium caldariorum large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2691 Score = 317 bits (160), Expect = 2e-83 Identities = 269/304 (88%), Gaps = 1/304 (0%) Strand = Plus / Plus Query: 284 accggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaa 343 |||| |||| |||||||||| |||| || | ||||| |||||||| ||||||||||||| Sbjct: 592 accgaagccatagcgaaagcaagtcataccaaggcgaatgtcactgtttatggacccgaa 651 Query: 344 cctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaac 403 || |||||||||||||||| ||||||||||| |||| |||||| || ||||||||||| Sbjct: 652 cccgggtgatctatccatggccaggatgaagtttgggtgaaaccaaatggaggtccgaac 711 Query: 404 cgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacc 463 |||||| ||||||| || || |||||||| ||||| ||||||||||||||||||||||| Sbjct: 712 cgactggtgttgaaaaaccaacggatgagctgtggataggggtgaaatgccactcgaact 771 Query: 464 cagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctag 522 | ||||||||||||||||||||||||||||||||||||||| ||||||| ||| || ||| Sbjct: 772 cggagctagctggttctccccgaaatgcgttgaggcgcagcggttgactagactatttag 831 Query: 523 gggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctga 582 |||||||||||||||||||||||||||| | | ||||||||||| || ||||||||||| Sbjct: 832 gggtaaagcactgtttcggtgcgggctgtgaaaacggtaccaaattgatgcaaactctga 891 Query: 583 atac 586 |||| Sbjct: 892 atac 895 Score = 260 bits (131), Expect = 5e-66 Identities = 223/253 (88%), Gaps = 3/253 (1%) Strand = Plus / Plus Query: 20 ctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttg 79 |||| |||||||||||||| |||||||| || | |||||||||||| |||||||||| | Sbjct: 338 ctctaacccgagtagcatgaggcacgtgaaaccttgtgtgaatcagcgaggaccacctcg 397 Query: 80 caaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaa 139 ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 398 taaggctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaa 457 Query: 140 gaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga 199 ||||||||| |||| ||||||||||| |||||||| | ||| |||||||||||| Sbjct: 458 gaacccccactggggagtgaaatagataatgaaaccg---taagcctacaagcagtggga 514 Query: 200 ggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagt 259 || || | || ||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 515 ggaaaatataatttctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagt 574 Query: 260 ggcttggttaagg 272 ||| ||||||||| Sbjct: 575 ggcctggttaagg 587
>gb|DQ160149.1| Taraxacum officinale To116-3 mRNA, partial sequence Length = 187 Score = 315 bits (159), Expect = 9e-83 Identities = 174/179 (97%) Strand = Plus / Plus Query: 277 ggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatgg 336 |||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| Sbjct: 5 ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatgg 64 Query: 337 acccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagagg 396 ||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| Sbjct: 65 acccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggagg 124 Query: 397 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 455 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 125 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 183
>dbj|AK105328.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-118-A07, full insert sequence Length = 1055 Score = 313 bits (158), Expect = 4e-82 Identities = 161/162 (99%) Strand = Plus / Plus Query: 2 aagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 61 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 355 aagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 414 Query: 62 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 415 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 474 Query: 122 gtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 163 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 475 gtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 516
>emb|AM084275.1| Cyanoptyche gloeocystis cyanelle 16S rRNA gene (partial), 23S rRNA gene (partial), tRNA-Ile gene, tRNA-Ala gene and ITS1, strain SAG 34.90 Length = 4586 Score = 313 bits (158), Expect = 4e-82 Identities = 320/369 (86%), Gaps = 5/369 (1%) Strand = Plus / Plus Query: 220 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 279 |||||||||||||||||||||||||||||| ||||| |||||| |||||||| || | Sbjct: 2385 gcgtgcctgttgaagaatgagccggcgacttataggtagtggca-ggttaaggtaatg-- 2441 Query: 280 acccaccggagccgtagcgaaagcgagtcttaatagggcgatt-gtcactgcttatggac 338 | || |||||| |||||||||||||| ||||||| ||| || |||||| |||| ||| Sbjct: 2442 atttactggagccatagcgaaagcgagttttaatagagcgtttagtcactatttatagac 2501 Query: 339 ccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtc 398 ||||||| |||||||||| ||||| ||||| |||||||| | | ||||||| |||| | Sbjct: 2502 ccgaacccgggtgatctaaccatggccagggtgaagcttaggtaaaactaaatggaggcc 2561 Query: 399 cgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactc 458 |||||||| ||||||||| |||| ||||||||||||||||||||||||||||||| || Sbjct: 2562 cgaaccgatcgatgttgaaaaatcgccggatgagttgtggttaggggtgaaatgccaatc 2621 Query: 459 gaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga-ctggaca 517 |||||| ||||||||||||||||||||||||||||||||||||||| ||||| | | Sbjct: 2622 gaacccggagctagctggttctccccgaaatgcgttgaggcgcagcggttgatgttataa 2681 Query: 518 tctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaac 577 | |||||||||||||||||||||||||||||| || ||| |||||||||||||||||||| Sbjct: 2682 tttaggggtaaagcactgtttcggtgcgggctacgagagtggtaccaaatcgaggcaaac 2741 Query: 578 tctgaatac 586 ||||||||| Sbjct: 2742 tctgaatac 2750 Score = 139 bits (70), Expect = 1e-29 Identities = 100/110 (90%) Strand = Plus / Plus Query: 30 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 89 |||||||||||||||||| |||||||||||||||||| |||||||||| | ||||||||| Sbjct: 2196 agtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggctaaa 2255 Query: 90 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaa 139 || ||||| |||||||||||| | |||||||||||||||||||||||| Sbjct: 2256 tattcctgaatgaccgatagcgtaacagtaccgtgagggaaaggtgaaaa 2305
>gb|AF497435.1| Gossypium hirsutum clone T1F05 unknown chloroplast sequence Length = 640 Score = 307 bits (155), Expect = 2e-80 Identities = 220/239 (92%), Gaps = 6/239 (2%) Strand = Plus / Plus Query: 2 aagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 61 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 404 aagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 463 Query: 62 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 464 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 523 Query: 122 gtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctg 181 ||||||||| |||||||||||||||| ||| ||||||||||||| |||||||| | Sbjct: 524 gtgagggaagggtgaaaagaacccccgtcggggagtgaaatagaacatgaaaccg---ta 580 Query: 182 agctcccaagcagtgggagg-ggaaagtgatctctgaccgcgtgcctgttgaagaatga 239 ||||||||||||| |||||| | || | |||||||||||||||||||||||||||| Sbjct: 581 agctcccaagcagngggaggagcccaggg--ctctgaccgcgtgcctgttgaagaatga 637
>dbj|AK060245.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-003-G06, full insert sequence Length = 1707 Score = 305 bits (154), Expect = 9e-80 Identities = 157/158 (99%) Strand = Plus / Plus Query: 2 aagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 61 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 269 aagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 328 Query: 62 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 329 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 388 Query: 122 gtgagggaaaggtgaaaagaacccccagtgggtagtga 159 |||||||||||||||||||||||||||||||||||||| Sbjct: 389 gtgagggaaaggtgaaaagaacccccagtgggtagtga 426
>gb|AC147496.19| Medicago truncatula clone mth2-6i7, complete sequence Length = 148736 Score = 303 bits (153), Expect = 3e-79 Identities = 183/193 (94%) Strand = Plus / Minus Query: 393 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 452 ||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||| Sbjct: 141909 gaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttagcggtgaaatg 141850 Query: 453 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact 512 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 141849 ccactcgaacccagagctagctggttctccctgaaatgcgttgaggcgcagcagttgact 141790 Query: 513 ggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgagg 572 |||||| ||||||||||||| |||||||| ||||| ||| ||||||| ||||||||||| Sbjct: 141789 ggacatttaggggtaaagcattgtttcggcacgggccgcgggagcggttccaaatcgagg 141730 Query: 573 caaactctgaata 585 ||||||||||||| Sbjct: 141729 caaactctgaata 141717
>emb|AJ538583.1|NTA538583 Nicotiana tabacum cDNA-AFLP-fragment BC3-M31-041 Length = 226 Score = 301 bits (152), Expect = 1e-78 Identities = 170/176 (96%) Strand = Plus / Plus Query: 2 aagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 41 aagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 100 Query: 62 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 121 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 101 tcaacaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 160 Query: 122 gtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgt 177 ||||||||| ||||||||||||||||| ||| ||||||||||||| ||||||||| Sbjct: 161 gtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccgt 216
>gb|L43542.1|TBXCPRRNL Trebouxia aggregata chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 5398 Score = 299 bits (151), Expect = 5e-78 Identities = 236/262 (90%), Gaps = 3/262 (1%) Strand = Plus / Plus Query: 320 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgg 379 ||||||||| |||||||||||||||| |||||||||| ||||| |||||||||||||||| Sbjct: 800 attgtcacttcttatggacccgaacccgggtgatctaaccatggccaggatgaagcttgg 859 Query: 380 atgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggt 439 | |||| ||| ||||||||||||||| ||||||||| |||| |||||||||||||||| Sbjct: 860 gtaaaaccaagtggaggtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggt 919 Query: 440 taggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggc 499 |||||||||||||||| ||||||| ||||||||||| |||||||||||||||||||||| Sbjct: 920 taggggtgaaatgccaatcgaacctggagctagctggatctccccgaaatgcgttgaggc 979 Query: 500 gcagcagttgac--tggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgag 556 ||||| ||| || ||| | ||||||||||||||||||||||||||||||||||| ||| Sbjct: 980 gcagcggttaacgatgggctgtctaggggtaaagcactgtttcggtgcgggctgcgagag 1039 Query: 557 cggtaccaaatcgaggcaaact 578 ||||||||||||| ||||||| Sbjct: 1040 cggtaccaaatcgtagcaaact 1061 Score = 168 bits (85), Expect = 1e-38 Identities = 137/153 (89%), Gaps = 1/153 (0%) Strand = Plus / Plus Query: 26 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 85 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 490 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 549 Query: 86 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg-aaaagaacc 144 |||||||| ||| |||||||||| ||| ||||||||||||||||||||| ||||||||| Sbjct: 550 taaatacttttggatgaccgatagtgaaatagtaccgtgagggaaaggtgaaaaagaacc 609 Query: 145 cccagtgggtagtgaaatagaacgtgaaaccgt 177 || ||| ||||||||||||| ||||||||| Sbjct: 610 cctgtaggggagtgaaatagaacatgaaaccgt 642 Score = 91.7 bits (46), Expect = 2e-15 Identities = 55/58 (94%) Strand = Plus / Plus Query: 215 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 272 ||||||||||||||||||||||||||||||||||| ||| | |||||||||||||||| Sbjct: 693 tgaccgcgtgcctgttgaagaatgagccggcgacttataaggagtggcttggttaagg 750
>gb|AY305264.1| Cucumis melo clone M6-L12 orf124, orf118, tRNA-Met, and atp9 genes, complete sequence; and atp6 pseudogene, partial sequence; mitochondrial Length = 10403 Score = 295 bits (149), Expect = 8e-77 Identities = 204/221 (92%), Gaps = 1/221 (0%) Strand = Plus / Minus Query: 365 caggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcag 424 ||||||| ||||||| |||||||||| ||||||||||| |||||||||||||||||||| Sbjct: 3111 caggatgcagcttgggtgaaactaagtggaggtccgaactgactgatgttgaagaatcag 3052 Query: 425 cggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcccc 484 |||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||| Sbjct: 3051 cggatgagttgtggttaggggtgaaatgccactcaaacc-agagctagctggttctccct 2993 Query: 485 gaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgc 544 ||||||| |||| |||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 2992 gaaatgcattgaagcgcagcagttgactggacatctaggagtaaagcactgtttcggtgc 2933 Query: 545 gggctgcgcgagcggtaccaaatcgaggcaaactctgaata 585 |||| | |||| ||||||||| ||||||||||||||||| Sbjct: 2932 gggcaatgagagcagtaccaaattgaggcaaactctgaata 2892 Score = 157 bits (79), Expect = 5e-35 Identities = 121/135 (89%), Gaps = 5/135 (3%) Strand = Plus / Minus Query: 212 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 271 |||||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 3249 ctctgaccgcgtacctattgaagaatgagccgacgactcataggcagtggcttggttaag 3190 Query: 272 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 331 |||||||||||||||| ||||||||||||||| ||| |||| ||| |||||||| Sbjct: 3189 -----ggaacccaccggagccatagcgaaagcgagtcagaatggggcaattctcactgct 3135 Query: 332 tatggacccgaacct 346 ||||||||||||||| Sbjct: 3134 tatggacccgaacct 3120 Score = 139 bits (70), Expect = 1e-29 Identities = 79/82 (96%) Strand = Plus / Minus Query: 2 aagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 61 ||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3459 aagcatccctagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 3400 Query: 62 tcagcaaggaccaccttgcaag 83 | |||||||||||||||||||| Sbjct: 3399 ttagcaaggaccaccttgcaag 3378 Score = 95.6 bits (48), Expect = 2e-16 Identities = 75/84 (89%) Strand = Plus / Minus Query: 92 ctcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtg 151 ||||||| ||||| |||| |||||||||||||||||||| ||||||||||||||||| | Sbjct: 3365 ctcctggctgacctatagtgaagtagtaccgtgagggaagggtgaaaagaacccccatcg 3306 Query: 152 ggtagtgaaatagaacgtgaaacc 175 || |||||||||||| ||||||| Sbjct: 3305 gggagtgaaatagaagatgaaacc 3282
>gb|AY835431.1| Pseudendoclonium akinetum chloroplast, complete genome Length = 195867 Score = 291 bits (147), Expect = 1e-75 Identities = 315/367 (85%), Gaps = 8/367 (2%) Strand = Plus / Plus Query: 215 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 274 ||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||| | Sbjct: 192429 tgaccgcgtgcctgttgaagaatgagccggcgacttatagggagtggcttggttaaggta 192488 Query: 275 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 334 | || ||||||||| ||||||||| ||||| ||||||||| |||||||| ||||| Sbjct: 192489 a---aat--accggagccaaagcgaaagcaagtctgaatagggcgcttgtcacttcttat 192543 Query: 335 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcaga 394 ||||||||||| | |||||||| ||||| |||||||||| ||||| | | || || || Sbjct: 192544 ggacccgaacccgagtgatctaaccatggccaggatgaatcttgggtaacaccaaatgga 192603 Query: 395 ggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcc 454 | |||||||||| ||||||||| |||| ||||||||| |||||||||||||||||| || Sbjct: 192604 agaccgaaccgaccgatgttgaaaaatcggcggatgagctgtggttaggggtgaaattcc 192663 Query: 455 actcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga--ct 512 | |||||| | ||||||||||| ||||| ||||||| ||||||||||||| ||||| | Sbjct: 192664 agtcgaactcggagctagctggatctcctcgaaatgtgttgaggcgcagcggttgatgat 192723 Query: 513 ggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 571 || | || ||||||||||||||||||||||||||||||||| |||||||| |||||| Sbjct: 192724 gggctatttaggggtaaagcactgtttcggtgcgggctgcgaaagcggtactaaatcgtc 192783 Query: 572 gcaaact 578 ||||||| Sbjct: 192784 gcaaact 192790 Score = 291 bits (147), Expect = 1e-75 Identities = 315/367 (85%), Gaps = 8/367 (2%) Strand = Plus / Minus Query: 215 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 274 ||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||| | Sbjct: 144353 tgaccgcgtgcctgttgaagaatgagccggcgacttatagggagtggcttggttaaggta 144294 Query: 275 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 334 | || ||||||||| ||||||||| ||||| ||||||||| |||||||| ||||| Sbjct: 144293 a---aat--accggagccaaagcgaaagcaagtctgaatagggcgcttgtcacttcttat 144239 Query: 335 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcaga 394 ||||||||||| | |||||||| ||||| |||||||||| ||||| | | || || || Sbjct: 144238 ggacccgaacccgagtgatctaaccatggccaggatgaatcttgggtaacaccaaatgga 144179 Query: 395 ggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcc 454 | |||||||||| ||||||||| |||| ||||||||| |||||||||||||||||| || Sbjct: 144178 agaccgaaccgaccgatgttgaaaaatcggcggatgagctgtggttaggggtgaaattcc 144119 Query: 455 actcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga--ct 512 | |||||| | ||||||||||| ||||| ||||||| ||||||||||||| ||||| | Sbjct: 144118 agtcgaactcggagctagctggatctcctcgaaatgtgttgaggcgcagcggttgatgat 144059 Query: 513 ggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 571 || | || ||||||||||||||||||||||||||||||||| |||||||| |||||| Sbjct: 144058 gggctatttaggggtaaagcactgtttcggtgcgggctgcgaaagcggtactaaatcgtc 143999 Query: 572 gcaaact 578 ||||||| Sbjct: 143998 gcaaact 143992 Score = 170 bits (86), Expect = 3e-39 Identities = 140/154 (90%), Gaps = 3/154 (1%) Strand = Plus / Plus Query: 26 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 85 ||||||||||||||| |||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 192250 cccgagtagcatgggacacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaaggc 192309 Query: 86 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa-agaacc 144 |||||||||||| |||||||||| |||||||||||||||||||||||||||| |||| | Sbjct: 192310 taaatactcctgaatgaccgatagtgaagtagtaccgtgagggaaaggtgaaacagaa-c 192368 Query: 145 cccagt-gggtagtgaaatagaacgtgaaaccgt 177 |||||| ||| ||||||||||||| ||||||||| Sbjct: 192369 cccagtcggggagtgaaatagaacatgaaaccgt 192402 Score = 170 bits (86), Expect = 3e-39 Identities = 140/154 (90%), Gaps = 3/154 (1%) Strand = Plus / Minus Query: 26 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 85 ||||||||||||||| |||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 144532 cccgagtagcatgggacacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaaggc 144473 Query: 86 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa-agaacc 144 |||||||||||| |||||||||| |||||||||||||||||||||||||||| |||| | Sbjct: 144472 taaatactcctgaatgaccgatagtgaagtagtaccgtgagggaaaggtgaaacagaa-c 144414 Query: 145 cccagt-gggtagtgaaatagaacgtgaaaccgt 177 |||||| ||| ||||||||||||| ||||||||| Sbjct: 144413 cccagtcggggagtgaaatagaacatgaaaccgt 144380
>gb|AY330887.1| Cynomorium coccineum clone Cyno_19 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 287 bits (145), Expect = 2e-74 Identities = 319/374 (85%), Gaps = 6/374 (1%) Strand = Plus / Plus Query: 212 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 271 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 272 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 331 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 602 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 656 Query: 332 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 391 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 657 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 716 Query: 392 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 451 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 717 ggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 776 Query: 452 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 511 | || ||||||||| |||||||||||||||||||||||||||| ||||| ||| ||| || Sbjct: 777 gtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgtt-ac 835 Query: 512 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 571 ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| ||| Sbjct: 836 cagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgag 895 Query: 572 gcaaactctgaata 585 ||||||| |||||| Sbjct: 896 gcaaactatgaata 909 Score = 214 bits (108), Expect = 2e-52 Identities = 153/168 (91%) Strand = Plus / Plus Query: 6 atcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcag 65 |||| ||||||||||| |||||||||||||||||| |||| |||||||||||||||||| Sbjct: 342 atcattagcttatgctttgacccgagtagcatgggacacggagaatcccgtgtgaatcag 401 Query: 66 caaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtga 125 |||||||||||||||||||||| |||||| ||||||||| |||| ||||||||||||||| Sbjct: 402 caaggaccaccttgcaaggctagatactcttgggtgaccaatagtgaagtagtaccgtga 461 Query: 126 gggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaa 173 ||||| |||||||||||||| | |||| ||||||||||||| ||||| Sbjct: 462 gggaagggtgaaaagaacccttattggggagtgaaatagaacatgaaa 509
>gb|AY330884.1| Cynomorium coccineum clone Cyno_15 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 287 bits (145), Expect = 2e-74 Identities = 319/374 (85%), Gaps = 6/374 (1%) Strand = Plus / Plus Query: 212 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 271 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 272 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 331 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 602 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 656 Query: 332 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 391 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 657 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 716 Query: 392 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 451 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 717 ggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 776 Query: 452 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 511 | || ||||||||| |||||||||||||||||||||||||||| ||||| ||| ||| || Sbjct: 777 gtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgtt-ac 835 Query: 512 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 571 ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| ||| Sbjct: 836 cagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgag 895 Query: 572 gcaaactctgaata 585 ||||||| |||||| Sbjct: 896 gcaaactatgaata 909 Score = 214 bits (108), Expect = 2e-52 Identities = 153/168 (91%) Strand = Plus / Plus Query: 6 atcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcag 65 |||| ||||||||||| |||||||||||||||||| |||| |||||||||||||||||| Sbjct: 342 atcattagcttatgctttgacccgagtagcatgggacacggagaatcccgtgtgaatcag 401 Query: 66 caaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtga 125 |||||||||||||||||||||| |||||| ||||||||| |||| ||||||||||||||| Sbjct: 402 caaggaccaccttgcaaggctagatactcttgggtgaccaatagtgaagtagtaccgtga 461 Query: 126 gggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaa 173 ||||| |||||||||||||| | |||| ||||||||||||| ||||| Sbjct: 462 gggaagggtgaaaagaacccttattggggagtgaaatagaacatgaaa 509
>gb|AY330882.1| Cynomorium coccineum clone Cyno_13 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 287 bits (145), Expect = 2e-74 Identities = 319/374 (85%), Gaps = 6/374 (1%) Strand = Plus / Plus Query: 212 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 271 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 272 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 331 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 602 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 656 Query: 332 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 391 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 657 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 716 Query: 392 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 451 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 717 ggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 776 Query: 452 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 511 | || ||||||||| |||||||||||||||||||||||||||| ||||| ||| ||| || Sbjct: 777 gtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgtt-ac 835 Query: 512 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 571 ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| ||| Sbjct: 836 cagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgag 895 Query: 572 gcaaactctgaata 585 ||||||| |||||| Sbjct: 896 gcaaactatgaata 909 Score = 214 bits (108), Expect = 2e-52 Identities = 153/168 (91%) Strand = Plus / Plus Query: 6 atcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcag 65 |||| ||||||||||| |||||||||||||||||| |||| |||||||||||||||||| Sbjct: 342 atcattagcttatgctttgacccgagtagcatgggacacggagaatcccgtgtgaatcag 401 Query: 66 caaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtga 125 |||||||||||||||||||||| |||||| ||||||||| |||| ||||||||||||||| Sbjct: 402 caaggaccaccttgcaaggctagatactcttgggtgaccaatagtgaagtagtaccgtga 461 Query: 126 gggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaa 173 ||||| |||||||||||||| | |||| ||||||||||||| ||||| Sbjct: 462 gggaagggtgaaaagaacccttattggggagtgaaatagaacatgaaa 509
>gb|AY330881.1| Cynomorium coccineum clone Cyno_12 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 287 bits (145), Expect = 2e-74 Identities = 319/374 (85%), Gaps = 6/374 (1%) Strand = Plus / Plus Query: 212 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 271 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 272 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 331 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 602 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 656 Query: 332 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 391 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 657 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 716 Query: 392 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 451 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 717 ggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 776 Query: 452 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 511 | || ||||||||| |||||||||||||||||||||||||||| ||||| ||| ||| || Sbjct: 777 gtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgtt-ac 835 Query: 512 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 571 ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| ||| Sbjct: 836 cagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgag 895 Query: 572 gcaaactctgaata 585 ||||||| |||||| Sbjct: 896 gcaaactatgaata 909 Score = 206 bits (104), Expect = 6e-50 Identities = 152/168 (90%) Strand = Plus / Plus Query: 6 atcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcag 65 |||| ||||||||||| |||||||||||||||||| |||| ||||||| |||||||||| Sbjct: 342 atcattagcttatgctttgacccgagtagcatgggacacggagaatcccatgtgaatcag 401 Query: 66 caaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtga 125 |||||||||||||||||||||| |||||| ||||||||| |||| ||||||||||||||| Sbjct: 402 caaggaccaccttgcaaggctagatactcttgggtgaccaatagtgaagtagtaccgtga 461 Query: 126 gggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaa 173 ||||| |||||||||||||| | |||| ||||||||||||| ||||| Sbjct: 462 gggaagggtgaaaagaacccttattggggagtgaaatagaacatgaaa 509
>gb|AY330880.1| Cynomorium coccineum clone Cyno_11 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 287 bits (145), Expect = 2e-74 Identities = 319/374 (85%), Gaps = 6/374 (1%) Strand = Plus / Plus Query: 212 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 271 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 272 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 331 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 602 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 656 Query: 332 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 391 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 657 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 716 Query: 392 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 451 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 717 ggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 776 Query: 452 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 511 | || ||||||||| |||||||||||||||||||||||||||| ||||| ||| ||| || Sbjct: 777 gtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgtt-ac 835 Query: 512 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 571 ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| ||| Sbjct: 836 cagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgag 895 Query: 572 gcaaactctgaata 585 ||||||| |||||| Sbjct: 896 gcaaactatgaata 909 Score = 214 bits (108), Expect = 2e-52 Identities = 153/168 (91%) Strand = Plus / Plus Query: 6 atcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcag 65 |||| ||||||||||| |||||||||||||||||| |||| |||||||||||||||||| Sbjct: 342 atcattagcttatgctttgacccgagtagcatgggacacggagaatcccgtgtgaatcag 401 Query: 66 caaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtga 125 |||||||||||||||||||||| |||||| ||||||||| |||| ||||||||||||||| Sbjct: 402 caaggaccaccttgcaaggctagatactcttgggtgaccaatagtgaagtagtaccgtga 461 Query: 126 gggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaa 173 ||||| |||||||||||||| | |||| ||||||||||||| ||||| Sbjct: 462 gggaagggtgaaaagaacccttattggggagtgaaatagaacatgaaa 509
>gb|AY330879.1| Cynomorium coccineum clone Cyno_10 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2696 Score = 287 bits (145), Expect = 2e-74 Identities = 319/374 (85%), Gaps = 6/374 (1%) Strand = Plus / Plus Query: 212 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 271 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 541 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 600 Query: 272 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 331 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 601 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 655 Query: 332 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 391 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 656 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 715 Query: 392 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 451 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 716 ggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 775 Query: 452 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 511 | || ||||||||| |||||||||||||||||||||||||||| ||||| ||| ||| || Sbjct: 776 gtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgtt-ac 834 Query: 512 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 571 ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| ||| Sbjct: 835 cagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgag 894 Query: 572 gcaaactctgaata 585 ||||||| |||||| Sbjct: 895 gcaaactatgaata 908 Score = 214 bits (108), Expect = 2e-52 Identities = 153/168 (91%) Strand = Plus / Plus Query: 6 atcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcag 65 |||| ||||||||||| |||||||||||||||||| |||| |||||||||||||||||| Sbjct: 341 atcattagcttatgctttgacccgagtagcatgggacacggagaatcccgtgtgaatcag 400 Query: 66 caaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtga 125 |||||||||||||||||||||| |||||| ||||||||| |||| ||||||||||||||| Sbjct: 401 caaggaccaccttgcaaggctagatactcttgggtgaccaatagtgaagtagtaccgtga 460 Query: 126 gggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaa 173 ||||| |||||||||||||| | |||| ||||||||||||| ||||| Sbjct: 461 gggaagggtgaaaagaacccttattggggagtgaaatagaacatgaaa 508
>gb|AY330878.1| Cynomorium coccineum clone Cyno_9 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 287 bits (145), Expect = 2e-74 Identities = 319/374 (85%), Gaps = 6/374 (1%) Strand = Plus / Plus Query: 212 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 271 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 272 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 331 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 602 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 656 Query: 332 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 391 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 657 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 716 Query: 392 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 451 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 717 ggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 776 Query: 452 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 511 | || ||||||||| |||||||||||||||||||||||||||| ||||| ||| ||| || Sbjct: 777 gtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgtt-ac 835 Query: 512 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 571 ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| ||| Sbjct: 836 cagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgag 895 Query: 572 gcaaactctgaata 585 ||||||| |||||| Sbjct: 896 gcaaactatgaata 909 Score = 214 bits (108), Expect = 2e-52 Identities = 153/168 (91%) Strand = Plus / Plus Query: 6 atcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcag 65 |||| ||||||||||| |||||||||||||||||| |||| |||||||||||||||||| Sbjct: 342 atcattagcttatgctttgacccgagtagcatgggacacggagaatcccgtgtgaatcag 401 Query: 66 caaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtga 125 |||||||||||||||||||||| |||||| ||||||||| |||| ||||||||||||||| Sbjct: 402 caaggaccaccttgcaaggctagatactcttgggtgaccaatagtgaagtagtaccgtga 461 Query: 126 gggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaa 173 ||||| |||||||||||||| | |||| ||||||||||||| ||||| Sbjct: 462 gggaagggtgaaaagaacccttattggggagtgaaatagaacatgaaa 509
>gb|AY330877.1| Cynomorium coccineum clone Cyno_8 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 287 bits (145), Expect = 2e-74 Identities = 319/374 (85%), Gaps = 6/374 (1%) Strand = Plus / Plus Query: 212 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 271 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 272 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 331 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 602 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 656 Query: 332 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 391 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 657 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 716 Query: 392 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 451 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 717 ggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 776 Query: 452 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 511 | || ||||||||| |||||||||||||||||||||||||||| ||||| ||| ||| || Sbjct: 777 gtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgtt-ac 835 Query: 512 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 571 ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| ||| Sbjct: 836 cagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgag 895 Query: 572 gcaaactctgaata 585 ||||||| |||||| Sbjct: 896 gcaaactatgaata 909 Score = 214 bits (108), Expect = 2e-52 Identities = 153/168 (91%) Strand = Plus / Plus Query: 6 atcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcag 65 |||| ||||||||||| |||||||||||||||||| |||| |||||||||||||||||| Sbjct: 342 atcattagcttatgctttgacccgagtagcatgggacacggagaatcccgtgtgaatcag 401 Query: 66 caaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtga 125 |||||||||||||||||||||| |||||| ||||||||| |||| ||||||||||||||| Sbjct: 402 caaggaccaccttgcaaggctagatactcttgggtgaccaatagtgaagtagtaccgtga 461 Query: 126 gggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaa 173 ||||| |||||||||||||| | |||| ||||||||||||| ||||| Sbjct: 462 gggaagggtgaaaagaacccttattggggagtgaaatagaacatgaaa 509
>gb|AY330873.1| Cynomorium coccineum clone Cyno_4 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 287 bits (145), Expect = 2e-74 Identities = 319/374 (85%), Gaps = 6/374 (1%) Strand = Plus / Plus Query: 212 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 271 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 272 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 331 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 602 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 656 Query: 332 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 391 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 657 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 716 Query: 392 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 451 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 717 ggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 776 Query: 452 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 511 | || ||||||||| |||||||||||||||||||||||||||| ||||| ||| ||| || Sbjct: 777 gtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgtt-ac 835 Query: 512 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 571 ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| ||| Sbjct: 836 cagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgag 895 Query: 572 gcaaactctgaata 585 ||||||| |||||| Sbjct: 896 gcaaactatgaata 909 Score = 214 bits (108), Expect = 2e-52 Identities = 153/168 (91%) Strand = Plus / Plus Query: 6 atcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcag 65 |||| ||||||||||| |||||||||||||||||| |||| |||||||||||||||||| Sbjct: 342 atcattagcttatgctttgacccgagtagcatgggacacggagaatcccgtgtgaatcag 401 Query: 66 caaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtga 125 |||||||||||||||||||||| |||||| ||||||||| |||| ||||||||||||||| Sbjct: 402 caaggaccaccttgcaaggctagatactcttgggtgaccaatagtgaagtagtaccgtga 461 Query: 126 gggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaa 173 ||||| |||||||||||||| | |||| ||||||||||||| ||||| Sbjct: 462 gggaagggtgaaaagaacccttattggggagtgaaatagaacatgaaa 509
>gb|AY330872.1| Cynomorium coccineum clone Cyno_3 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 287 bits (145), Expect = 2e-74 Identities = 319/374 (85%), Gaps = 6/374 (1%) Strand = Plus / Plus Query: 212 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 271 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 272 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 331 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 602 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 656 Query: 332 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 391 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 657 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 716 Query: 392 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 451 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 717 ggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 776 Query: 452 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 511 | || ||||||||| |||||||||||||||||||||||||||| ||||| ||| ||| || Sbjct: 777 gtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgtt-ac 835 Query: 512 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 571 ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| ||| Sbjct: 836 cagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgag 895 Query: 572 gcaaactctgaata 585 ||||||| |||||| Sbjct: 896 gcaaactatgaata 909 Score = 214 bits (108), Expect = 2e-52 Identities = 153/168 (91%) Strand = Plus / Plus Query: 6 atcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcag 65 |||| ||||||||||| |||||||||||||||||| |||| |||||||||||||||||| Sbjct: 342 atcattagcttatgctttgacccgagtagcatgggacacggagaatcccgtgtgaatcag 401 Query: 66 caaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtga 125 |||||||||||||||||||||| |||||| ||||||||| |||| ||||||||||||||| Sbjct: 402 caaggaccaccttgcaaggctagatactcttgggtgaccaatagtgaagtagtaccgtga 461 Query: 126 gggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaa 173 ||||| |||||||||||||| | |||| ||||||||||||| ||||| Sbjct: 462 gggaagggtgaaaagaacccttattggggagtgaaatagaacatgaaa 509
>gb|AY330871.1| Cynomorium coccineum clone Cyno_2 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 287 bits (145), Expect = 2e-74 Identities = 319/374 (85%), Gaps = 6/374 (1%) Strand = Plus / Plus Query: 212 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 271 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 272 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 331 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 602 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 656 Query: 332 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 391 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 657 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 716 Query: 392 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 451 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 717 ggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 776 Query: 452 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 511 | || ||||||||| |||||||||||||||||||||||||||| ||||| ||| ||| || Sbjct: 777 gtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgtt-ac 835 Query: 512 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 571 ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| ||| Sbjct: 836 cagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgag 895 Query: 572 gcaaactctgaata 585 ||||||| |||||| Sbjct: 896 gcaaactatgaata 909 Score = 214 bits (108), Expect = 2e-52 Identities = 153/168 (91%) Strand = Plus / Plus Query: 6 atcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcag 65 |||| ||||||||||| |||||||||||||||||| |||| |||||||||||||||||| Sbjct: 342 atcattagcttatgctttgacccgagtagcatgggacacggagaatcccgtgtgaatcag 401 Query: 66 caaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtga 125 |||||||||||||||||||||| |||||| ||||||||| |||| ||||||||||||||| Sbjct: 402 caaggaccaccttgcaaggctagatactcttgggtgaccaatagtgaagtagtaccgtga 461 Query: 126 gggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaa 173 ||||| |||||||||||||| | |||| ||||||||||||| ||||| Sbjct: 462 gggaagggtgaaaagaacccttattggggagtgaaatagaacatgaaa 509
>emb|AJ245645.1|PWI245645 Prototheca wickerhamii chloroplast partial genome Length = 22085 Score = 287 bits (145), Expect = 2e-74 Identities = 228/253 (90%), Gaps = 2/253 (0%) Strand = Plus / Plus Query: 336 gacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagag 395 |||||||||| |||||||||| |||||||||||||||||||||| ||| || ||| || Sbjct: 6375 gacccgaacccgggtgatctaaccatgaccaggatgaagcttgggtgataccaagtgaag 6434 Query: 396 gtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 455 |||||||||||| ||||||||| |||| ||||||||||||||||||| |||||||| ||| Sbjct: 6435 gtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttagcggtgaaatacca 6494 Query: 456 ctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga-ctgg 514 |||||||| |||||||||||||||||||||||||||||||||||||||||| | || | Sbjct: 6495 gtcgaacccggagctagctggttctccccgaaatgcgttgaggcgcagcagtacatctag 6554 Query: 515 ac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggc 573 | |||||||||||||||||||||||||||||||||| | || ||||||||||||| ||| Sbjct: 6555 tctatctaggggtaaagcactgtttcggtgcgggctgtgagaacggtaccaaatcgtggc 6614 Query: 574 aaactctgaatac 586 ||||||||||||| Sbjct: 6615 aaactctgaatac 6627 Score = 121 bits (61), Expect = 3e-24 Identities = 94/105 (89%) Strand = Plus / Plus Query: 42 cacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtg 101 |||||| |||||||| |||||| || |||||||||| | |||||||||||||||| | || Sbjct: 6067 cacgtgaaatcccgtatgaatccgcgaggaccacctcgtaaggctaaatactcctagatg 6126 Query: 102 accgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 146 |||||||| ||| |||||||||||||||| ||||||||||||||| Sbjct: 6127 accgatagtgaaatagtaccgtgagggaatggtgaaaagaacccc 6171 Score = 63.9 bits (32), Expect = 5e-07 Identities = 35/36 (97%) Strand = Plus / Plus Query: 214 ctgaccgcgtgcctgttgaagaatgagccggcgact 249 |||||||| ||||||||||||||||||||||||||| Sbjct: 6234 ctgaccgcatgcctgttgaagaatgagccggcgact 6269 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Plus Query: 289 agccgtagcgaaagcgagtcttaatagggcgat 321 ||||||||| ||||||||||| ||||||||||| Sbjct: 6304 agccgtagcaaaagcgagtctgaatagggcgat 6336
>emb|AJ222802.1|CHPW5KB Prototheca wickerhamii 5.0 kb plastid DNA fragment of ribosomal RNA genecluster Length = 5001 Score = 287 bits (145), Expect = 2e-74 Identities = 228/253 (90%), Gaps = 2/253 (0%) Strand = Plus / Plus Query: 336 gacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagag 395 |||||||||| |||||||||| |||||||||||||||||||||| ||| || ||| || Sbjct: 3438 gacccgaacccgggtgatctaaccatgaccaggatgaagcttgggtgataccaagtgaag 3497 Query: 396 gtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 455 |||||||||||| ||||||||| |||| ||||||||||||||||||| |||||||| ||| Sbjct: 3498 gtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttagcggtgaaatacca 3557 Query: 456 ctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga-ctgg 514 |||||||| |||||||||||||||||||||||||||||||||||||||||| | || | Sbjct: 3558 gtcgaacccggagctagctggttctccccgaaatgcgttgaggcgcagcagtacatctag 3617 Query: 515 ac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggc 573 | |||||||||||||||||||||||||||||||||| | || ||||||||||||| ||| Sbjct: 3618 tctatctaggggtaaagcactgtttcggtgcgggctgtgagaacggtaccaaatcgtggc 3677 Query: 574 aaactctgaatac 586 ||||||||||||| Sbjct: 3678 aaactctgaatac 3690 Score = 121 bits (61), Expect = 3e-24 Identities = 94/105 (89%) Strand = Plus / Plus Query: 42 cacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtg 101 |||||| |||||||| |||||| || |||||||||| | |||||||||||||||| | || Sbjct: 3130 cacgtgaaatcccgtatgaatccgcgaggaccacctcgtaaggctaaatactcctagatg 3189 Query: 102 accgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 146 |||||||| ||| |||||||||||||||| ||||||||||||||| Sbjct: 3190 accgatagtgaaatagtaccgtgagggaatggtgaaaagaacccc 3234 Score = 63.9 bits (32), Expect = 5e-07 Identities = 35/36 (97%) Strand = Plus / Plus Query: 214 ctgaccgcgtgcctgttgaagaatgagccggcgact 249 |||||||| ||||||||||||||||||||||||||| Sbjct: 3297 ctgaccgcatgcctgttgaagaatgagccggcgact 3332 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Plus Query: 289 agccgtagcgaaagcgagtcttaatagggcgat 321 ||||||||| ||||||||||| ||||||||||| Sbjct: 3367 agccgtagcaaaagcgagtctgaatagggcgat 3399
>gb|L42851.1|PTOCPRGOL Prototheca wickerhamii large subunit ribosomal RNA (rrnL) gene, partial sequence; chloroplast gene for chloroplast product Length = 2715 Score = 287 bits (145), Expect = 2e-74 Identities = 228/253 (90%), Gaps = 2/253 (0%) Strand = Plus / Plus Query: 336 gacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagag 395 |||||||||| |||||||||| |||||||||||||||||||||| ||| || ||| || Sbjct: 726 gacccgaacccgggtgatctaaccatgaccaggatgaagcttgggtgataccaagtgaag 785 Query: 396 gtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 455 |||||||||||| ||||||||| |||| ||||||||||||||||||| |||||||| ||| Sbjct: 786 gtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttagcggtgaaatacca 845 Query: 456 ctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga-ctgg 514 |||||||| |||||||||||||||||||||||||||||||||||||||||| | || | Sbjct: 846 gtcgaacccggagctagctggttctccccgaaatgcgttgaggcgcagcagtacatctag 905 Query: 515 ac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggc 573 | |||||||||||||||||||||||||||||||||| | || ||||||||||||| ||| Sbjct: 906 tctatctaggggtaaagcactgtttcggtgcgggctgtgagaacggtaccaaatcgtggc 965 Query: 574 aaactctgaatac 586 ||||||||||||| Sbjct: 966 aaactctgaatac 978 Score = 121 bits (61), Expect = 3e-24 Identities = 94/105 (89%) Strand = Plus / Plus Query: 42 cacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtg 101 |||||| |||||||| |||||| || |||||||||| | |||||||||||||||| | || Sbjct: 418 cacgtgaaatcccgtatgaatccgcgaggaccacctcgtaaggctaaatactcctagatg 477 Query: 102 accgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 146 |||||||| ||| |||||||||||||||| ||||||||||||||| Sbjct: 478 accgatagtgaaatagtaccgtgagggaatggtgaaaagaacccc 522 Score = 63.9 bits (32), Expect = 5e-07 Identities = 35/36 (97%) Strand = Plus / Plus Query: 214 ctgaccgcgtgcctgttgaagaatgagccggcgact 249 |||||||| ||||||||||||||||||||||||||| Sbjct: 585 ctgaccgcatgcctgttgaagaatgagccggcgact 620 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Plus Query: 289 agccgtagcgaaagcgagtcttaatagggcgat 321 ||||||||| ||||||||||| ||||||||||| Sbjct: 655 agccgtagcaaaagcgagtctgaatagggcgat 687
>emb|AM084277.1| Porphyridium aerugineum chloroplast 16S rRNA gene (partial), 23S rRNA gene (partial), tRNA-Ile gene and ITS1, strain SAG 43.94 Length = 4290 Score = 287 bits (145), Expect = 2e-74 Identities = 262/301 (87%) Strand = Plus / Plus Query: 286 cggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacc 345 ||||||| |||||||||||||||| | |||||| | |||||| |||| |||||||||| Sbjct: 2189 cggagccatagcgaaagcgagtctgataagggcgttagtcactatttatagacccgaacc 2248 Query: 346 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 405 || ||||||| |||| |||||||||||||| | | | ||| || ||||||||||||| Sbjct: 2249 cggatgatctagtcatggccaggatgaagcttaggtaacactgagtggaggtccgaaccg 2308 Query: 406 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 465 |||||||||||| ||||||||||||||||||| ||||||||||||||||| ||||| || Sbjct: 2309 actgatgttgaaaaatcagcggatgagttgtgattaggggtgaaatgccaatcgaatccg 2368 Query: 466 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 525 ||||||||||||||||||||||||||||||||||||||| ||| | | | | |||| Sbjct: 2369 gagctagctggttctccccgaaatgcgttgaggcgcagcggttaaatttaagcttggggg 2428 Query: 526 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 585 ||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||| Sbjct: 2429 taaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgatgcaaactctgaata 2488 Query: 586 c 586 | Sbjct: 2489 c 2489 Score = 131 bits (66), Expect = 3e-27 Identities = 129/150 (86%) Strand = Plus / Plus Query: 26 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 85 |||||||| ||||| |||||| || ||||| ||||||||| |||||||||| | ||||| Sbjct: 1937 cccgagtaatatgggacacgtgaaaccccgtatgaatcagcgaggaccacctcgtaaggc 1996 Query: 86 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 145 |||||| |||| | | |||||||| ||| |||||||||||||||||||||||||||||| Sbjct: 1997 taaatattcctagataaccgatagtgaaacagtaccgtgagggaaaggtgaaaagaaccc 2056 Query: 146 ccagtgggtagtgaaatagaacgtgaaacc 175 | | ||| ||||||||||||| ||||||| Sbjct: 2057 cgtgaggggagtgaaatagaacatgaaacc 2086 Score = 75.8 bits (38), Expect = 1e-10 Identities = 47/50 (94%) Strand = Plus / Plus Query: 213 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 262 ||||||| ||||||||||||||||||||||||||||| ||||| |||||| Sbjct: 2121 tctgacctcgtgcctgttgaagaatgagccggcgacttataggtagtggc 2170
>gb|AY584514.1| Oscillatoria sp. strain CCAP 1459/26 23S ribosomal RNA gene, partial sequence Length = 2364 Score = 283 bits (143), Expect = 3e-73 Identities = 264/303 (87%), Gaps = 1/303 (0%) Strand = Plus / Plus Query: 285 ccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaac 344 |||||||| || |||| ||||||| |||||||||| ||||| |||| ||||||||| Sbjct: 249 ccggagccaaagggaaaccgagtctgaatagggcgaaagtcacattttatagacccgaac 308 Query: 345 ctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaacc 404 | |||||||||| ||||| |||||||||||||||| | | || ||| |||||||||||| Sbjct: 309 ccgggtgatctaaccatgtccaggatgaagcttgggtaacaccaagtggaggtccgaacc 368 Query: 405 gactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccc 464 ||||||||||||| |||||||||||||| |||||||||||||||||||||| |||||||| Sbjct: 369 gactgatgttgaaaaatcagcggatgaggtgtggttaggggtgaaatgccaatcgaaccc 428 Query: 465 agagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctag-g 523 ||||||||||||||||||||||||| ||| ||||||||| || | |||||| | Sbjct: 429 ggagctagctggttctccccgaaatgtgtttaggcgcagcggtaacgattaaatctaggg 488 Query: 524 ggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaa 583 ||||||||||||||||||||||||||||| |||||||||||||||||| ||||||| ||| Sbjct: 489 ggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgagacaaactcagaa 548 Query: 584 tac 586 ||| Sbjct: 549 tac 551 Score = 192 bits (97), Expect = 9e-46 Identities = 136/149 (91%) Strand = Plus / Plus Query: 29 gagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaa 88 ||||||||||||||||||| |||||||||||||||| | |||||||||| | |||||||| Sbjct: 1 gagtagcatggggcacgtgaaatcccgtgtgaatcatcgaggaccacctcgaaaggctaa 60 Query: 89 atactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccca 148 ||||||||| ||||||||||||||| |||||||| ||||||||||||||||||||||| Sbjct: 61 atactcctgtgtgaccgatagcgaaatagtaccgcgagggaaaggtgaaaagaaccccgg 120 Query: 149 gtgggtagtgaaatagaacgtgaaaccgt 177 | ||| ||||||||||||| ||||||||| Sbjct: 121 gaggggagtgaaatagaacatgaaaccgt 149 Score = 60.0 bits (30), Expect = 9e-06 Identities = 33/34 (97%) Strand = Plus / Plus Query: 222 gtgcctgttgaagaatgagccggcgactcatagg 255 |||||||||||||||||||||||||||| ||||| Sbjct: 191 gtgcctgttgaagaatgagccggcgacttatagg 224
>gb|L42992.1|TESCPRGOL Tetraselmis carteriiformis large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2552 Score = 281 bits (142), Expect = 1e-72 Identities = 253/288 (87%), Gaps = 4/288 (1%) Strand = Plus / Plus Query: 295 agcgaaagcgagtcttaa-tagggcgattgtcactgcttatggacccgaacctgggtgat 353 ||||||||||||||| || || |||| | |||| | |||||||||||||||||||||||| Sbjct: 620 agcgaaagcgagtctgaaatacggcgctcgtcatttcttatggacccgaacctgggtgat 679 Query: 354 ctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgt 413 ||| ||||||||||| |||||||||| | |||| ||| || | ||||||| |||||||| Sbjct: 680 ctaaccatgaccagggtgaagcttgggtaaaaccaagtggaagcccgaacccactgatgt 739 Query: 414 tgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagc 473 |||| |||||| ||||||||||||||||| |||||||||||| |||||| |||||||||| Sbjct: 740 tgaaaaatcaggggatgagttgtggttagcggtgaaatgccaatcgaactcagagctagc 799 Query: 474 tggttctccccgaaatgcgttgaggcgcagc---agttgactggacatctaggggtaaag 530 ||| ||||||||||||||||||||||||||| ||||| || | || |||||||||| Sbjct: 800 tggatctccccgaaatgcgttgaggcgcagcggttgttgatgggtcgtcaaggggtaaag 859 Query: 531 cactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaact 578 |||||||||||||||||||||| ||||||||||||||| |||||||| Sbjct: 860 cactgtttcggtgcgggctgcgaaagcggtaccaaatcgtggcaaact 907 Score = 168 bits (85), Expect = 1e-38 Identities = 137/153 (89%), Gaps = 1/153 (0%) Strand = Plus / Plus Query: 26 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 85 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 358 cccgagtagcatggggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaaggc 417 Query: 86 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg-aaaagaacc 144 |||||||||||| || |||||||| |||||||||||| |||||||||||| ||||||||| Sbjct: 418 taaatactcctgagtcaccgatagtgaagtagtaccgcgagggaaaggtgaaaaagaacc 477 Query: 145 cccagtgggtagtgaaatagaacgtgaaaccgt 177 || ||| ||||||||||||| ||||||||| Sbjct: 478 cctgcaggggagtgaaatagaacatgaaaccgt 510 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 215 tgaccgcgtgcctgttgaagaatgagccggcgactcatagg 255 ||||||||| ||||||||||||||| ||||||||| ||||| Sbjct: 543 tgaccgcgttcctgttgaagaatgaaccggcgacttatagg 583
>dbj|AP006715.1| Porphyra yezoensis chloroplast DNA, complete genome Length = 191952 Score = 281 bits (142), Expect = 1e-72 Identities = 254/290 (87%), Gaps = 1/290 (0%) Strand = Plus / Plus Query: 298 gaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctat 357 ||||||||| | ||||| ||| | |||||| |||| |||||||||| || ||||||| Sbjct: 189567 gaaagcgagcttgaatagagcgttagtcactatttatagacccgaacccggatgatctag 189626 Query: 358 ccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaa 417 ||||| ||||| |||||||| | | | |||||| ||||||||||||||||||||||||| Sbjct: 189627 ccatggccagggtgaagcttaggtaacactaagtggaggtccgaaccgactgatgttgaa 189686 Query: 418 gaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggt 477 |||||||||||||||||||| |||||||||||||||| ||||| || |||||||||||| Sbjct: 189687 aaatcagcggatgagttgtggctaggggtgaaatgccaatcgaatccggagctagctggt 189746 Query: 478 tctccccgaaatgcgttgaggcgcagcagttgactggacatc-taggggtaaagcactgt 536 ||||||||||||| ||||||||||||| ||||| ||| | ||||||||||||||| Sbjct: 189747 tctccccgaaatgtgttgaggcgcagcggttgatgcttaatcttgggggtaaagcactgt 189806 Query: 537 ttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 586 |||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 189807 ttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatac 189856 Score = 281 bits (142), Expect = 1e-72 Identities = 254/290 (87%), Gaps = 1/290 (0%) Strand = Plus / Plus Query: 298 gaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctat 357 ||||||||| | ||||| ||| | |||||| |||| |||||||||| || ||||||| Sbjct: 150994 gaaagcgagcttgaatagagcgttagtcactatttatagacccgaacccggatgatctag 151053 Query: 358 ccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaa 417 ||||| ||||| |||||||| | | | |||||| ||||||||||||||||||||||||| Sbjct: 151054 ccatggccagggtgaagcttaggtaacactaagtggaggtccgaaccgactgatgttgaa 151113 Query: 418 gaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggt 477 |||||||||||||||||||| |||||||||||||||| ||||| || |||||||||||| Sbjct: 151114 aaatcagcggatgagttgtggctaggggtgaaatgccaatcgaatccggagctagctggt 151173 Query: 478 tctccccgaaatgcgttgaggcgcagcagttgactggacatc-taggggtaaagcactgt 536 ||||||||||||| ||||||||||||| ||||| ||| | ||||||||||||||| Sbjct: 151174 tctccccgaaatgtgttgaggcgcagcggttgatgcttaatcttgggggtaaagcactgt 151233 Query: 537 ttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 586 |||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 151234 ttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatac 151283 Score = 167 bits (84), Expect = 5e-38 Identities = 132/148 (89%) Strand = Plus / Plus Query: 30 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 89 |||||||||||||||||| |||||||||||||||||| |||||||||| | ||||||||| Sbjct: 189306 agtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggctaaa 189365 Query: 90 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 149 || | ||| |||||||||| ||| |||||||||||||||||||||||||||||||| | Sbjct: 189366 tattactgaatgaccgatagtgaaatagtaccgtgagggaaaggtgaaaagaaccccggg 189425 Query: 150 tgggtagtgaaatagaacgtgaaaccgt 177 ||| ||||||||||||| |||| |||| Sbjct: 189426 aggggagtgaaatagaacatgaacccgt 189453 Score = 167 bits (84), Expect = 5e-38 Identities = 132/148 (89%) Strand = Plus / Plus Query: 30 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 89 |||||||||||||||||| |||||||||||||||||| |||||||||| | ||||||||| Sbjct: 150733 agtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggctaaa 150792 Query: 90 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 149 || | ||| |||||||||| ||| |||||||||||||||||||||||||||||||| | Sbjct: 150793 tattactgaatgaccgatagtgaaatagtaccgtgagggaaaggtgaaaagaaccccggg 150852 Query: 150 tgggtagtgaaatagaacgtgaaaccgt 177 ||| ||||||||||||| |||| |||| Sbjct: 150853 aggggagtgaaatagaacatgaacccgt 150880 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 221 cgtgcctgttgaagaatgagccggcgactcatag 254 ||||| ||||||||||||||||||||||| |||| Sbjct: 189494 cgtgcatgttgaagaatgagccggcgacttatag 189527 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 221 cgtgcctgttgaagaatgagccggcgactcatag 254 ||||| ||||||||||||||||||||||| |||| Sbjct: 150921 cgtgcatgttgaagaatgagccggcgacttatag 150954
>gb|AY330886.1| Cynomorium coccineum clone Cyno_18 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 280 bits (141), Expect = 5e-72 Identities = 318/374 (85%), Gaps = 6/374 (1%) Strand = Plus / Plus Query: 212 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 271 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 541 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 600 Query: 272 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 331 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 601 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 655 Query: 332 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 391 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 656 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 715 Query: 392 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 451 ||||||||||| || |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 716 ggaggtccgaacagattgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 775 Query: 452 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 511 | || ||||||||| |||||||||||||||||||||||||||| ||||| ||| ||| || Sbjct: 776 gtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgtt-ac 834 Query: 512 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 571 ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| ||| Sbjct: 835 cagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgag 894 Query: 572 gcaaactctgaata 585 ||||||| |||||| Sbjct: 895 gcaaactatgaata 908 Score = 214 bits (108), Expect = 2e-52 Identities = 153/168 (91%) Strand = Plus / Plus Query: 6 atcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcag 65 |||| ||||||||||| |||||||||||||||||| |||| |||||||||||||||||| Sbjct: 341 atcattagcttatgctttgacccgagtagcatgggacacggagaatcccgtgtgaatcag 400 Query: 66 caaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtga 125 |||||||||||||||||||||| |||||| ||||||||| |||| ||||||||||||||| Sbjct: 401 caaggaccaccttgcaaggctagatactcttgggtgaccaatagtgaagtagtaccgtga 460 Query: 126 gggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaa 173 ||||| |||||||||||||| | |||| ||||||||||||| ||||| Sbjct: 461 gggaagggtgaaaagaacccttattggggagtgaaatagaacatgaaa 508
>gb|AY330876.1| Cynomorium coccineum clone Cyno_7 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 280 bits (141), Expect = 5e-72 Identities = 319/374 (85%), Gaps = 7/374 (1%) Strand = Plus / Plus Query: 212 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 271 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 272 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 331 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 602 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 656 Query: 332 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 391 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 657 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 716 Query: 392 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 451 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 717 ggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 776 Query: 452 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 511 | || ||||||||| |||||||||||||||||||||||||||| ||||| ||| ||| || Sbjct: 777 gtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagc-gtt-ac 834 Query: 512 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 571 ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| ||| Sbjct: 835 cagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgag 894 Query: 572 gcaaactctgaata 585 ||||||| |||||| Sbjct: 895 gcaaactatgaata 908 Score = 214 bits (108), Expect = 2e-52 Identities = 153/168 (91%) Strand = Plus / Plus Query: 6 atcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcag 65 |||| ||||||||||| |||||||||||||||||| |||| |||||||||||||||||| Sbjct: 342 atcattagcttatgctttgacccgagtagcatgggacacggagaatcccgtgtgaatcag 401 Query: 66 caaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtga 125 |||||||||||||||||||||| |||||| ||||||||| |||| ||||||||||||||| Sbjct: 402 caaggaccaccttgcaaggctagatactcttgggtgaccaatagtgaagtagtaccgtga 461 Query: 126 gggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaa 173 ||||| |||||||||||||| | |||| ||||||||||||| ||||| Sbjct: 462 gggaagggtgaaaagaacccttattggggagtgaaatagaacatgaaa 509
>gb|AY330875.1| Cynomorium coccineum clone Cyno_6 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 280 bits (141), Expect = 5e-72 Identities = 318/374 (85%), Gaps = 6/374 (1%) Strand = Plus / Plus Query: 212 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 271 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 272 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 331 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 602 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 656 Query: 332 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 391 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 657 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 716 Query: 392 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 451 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 717 ggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 776 Query: 452 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 511 | || ||||||||| |||||||||||||||||||||||||||| ||||| || ||| || Sbjct: 777 gtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagtcgtt-ac 835 Query: 512 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 571 ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| ||| Sbjct: 836 cagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgag 895 Query: 572 gcaaactctgaata 585 ||||||| |||||| Sbjct: 896 gcaaactatgaata 909 Score = 214 bits (108), Expect = 2e-52 Identities = 153/168 (91%) Strand = Plus / Plus Query: 6 atcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcag 65 |||| ||||||||||| |||||||||||||||||| |||| |||||||||||||||||| Sbjct: 342 atcattagcttatgctttgacccgagtagcatgggacacggagaatcccgtgtgaatcag 401 Query: 66 caaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtga 125 |||||||||||||||||||||| |||||| ||||||||| |||| ||||||||||||||| Sbjct: 402 caaggaccaccttgcaaggctagatactcttgggtgaccaatagtgaagtagtaccgtga 461 Query: 126 gggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaa 173 ||||| |||||||||||||| | |||| ||||||||||||| ||||| Sbjct: 462 gggaagggtgaaaagaacccttattggggagtgaaatagaacatgaaa 509
>gb|L42845.1|FRICPRGOL Friedmannia israeliensis large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2704 Score = 280 bits (141), Expect = 5e-72 Identities = 230/259 (88%), Gaps = 3/259 (1%) Strand = Plus / Plus Query: 323 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 382 |||||| |||||||||||||||| |||||||||| ||||| |||||||||||||||| | Sbjct: 680 gtcacttcttatggacccgaacccgggtgatctaaccatggccaggatgaagcttgggta 739 Query: 383 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 442 |||| ||| || |||||||||||| ||||||||| |||| ||||||||| ||||||||| Sbjct: 740 aaaccaagtggaagtccgaaccgaccgatgttgaaaaatcggcggatgagctgtggttag 799 Query: 443 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 502 ||||||||||||| |||||| | ||||||||||||||||||||||||||||||||||||| Sbjct: 800 gggtgaaatgccaatcgaactcggagctagctggttctccccgaaatgcgttgaggcgca 859 Query: 503 gcagt---tgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcgg 559 || || ||| || ||||||||||||||||||||||||||||||||||| |||||| Sbjct: 860 gcggttaatgatgggcggtctaggggtaaagcactgtttcggtgcgggctgcgagagcgg 919 Query: 560 taccaaatcgaggcaaact 578 |||||||||| ||||||| Sbjct: 920 taccaaatcgtagcaaact 938 Score = 163 bits (82), Expect = 8e-37 Identities = 106/114 (92%) Strand = Plus / Plus Query: 26 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 85 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 387 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 446 Query: 86 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaa 139 |||||||| ||| |||||||||||||| ||||||||||||||||||||||||| Sbjct: 447 taaatacttttggatgaccgatagcgaaatagtaccgtgagggaaaggtgaaaa 500 Score = 89.7 bits (45), Expect = 1e-14 Identities = 54/57 (94%) Strand = Plus / Plus Query: 214 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 270 |||||||||||||||||||||||||||||||||||| ||| | |||||||||||||| Sbjct: 571 ctgaccgcgtgcctgttgaagaatgagccggcgacttataaggagtggcttggttaa 627
>gb|AY008341.1| Trichosarcina mucosa large subunit ribosomal RNA (rrnL) gene, partial sequence; and rrnL and putative site-specific DNA endonuclease (rrnL) genes, complete cds; chloroplast genes for chloroplast products Length = 4502 Score = 276 bits (139), Expect = 8e-71 Identities = 313/367 (85%), Gaps = 8/367 (2%) Strand = Plus / Plus Query: 215 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 274 ||||||| ||||||||||||||||||||||||||| ||||| |||||||||||||||| | Sbjct: 598 tgaccgcatgcctgttgaagaatgagccggcgacttatagggagtggcttggttaaggca 657 Query: 275 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 334 | || || |||||| ||||||||| ||||| ||||||||| |||||||| |||| Sbjct: 658 aa--aagcc---ggagccaaagcgaaagcaagtctgaatagggcgcttgtcactttttat 712 Query: 335 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcaga 394 ||||||||||||| |||||||| ||||| |||||||||| ||||| | | || || || Sbjct: 713 ggacccgaacctgagtgatctaaccatggccaggatgaatcttgggtaacaccaaatgga 772 Query: 395 ggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcc 454 | |||||||||| ||||||||| |||| ||||||||| |||||||||||||||||| || Sbjct: 773 agaccgaaccgaccgatgttgaaaaatcggcggatgagctgtggttaggggtgaaattcc 832 Query: 455 actcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga--ct 512 | |||||| ||||||||||||| ||||| ||||||| ||||||||||||| ||||| | Sbjct: 833 agtcgaactcagagctagctggatctcctcgaaatgtgttgaggcgcagcggttgatgat 892 Query: 513 ggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 571 || | | ||||||||||||||||||||||||||||||||| |||||||| |||||| Sbjct: 893 gggctagttaggggtaaagcactgtttcggtgcgggctgcgaaagcggtactaaatcgtc 952 Query: 572 gcaaact 578 ||||||| Sbjct: 953 gcaaact 959 Score = 170 bits (86), Expect = 3e-39 Identities = 140/154 (90%), Gaps = 3/154 (1%) Strand = Plus / Plus Query: 26 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 85 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 419 cccgagtagcatggggcacgtgaaatcccgtgtgaatccgcgaggaccacctcgtaaggc 478 Query: 86 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa-agaacc 144 |||||||||||| |||||||||||||| |||||||||||||||||||||||| |||| | Sbjct: 479 taaatactcctgaatgaccgatagcgaaatagtaccgtgagggaaaggtgaaacagaa-c 537 Query: 145 cccagt-gggtagtgaaatagaacgtgaaaccgt 177 |||||| ||| ||||||| ||||| ||||||||| Sbjct: 538 cccagtcggggagtgaaaaagaacatgaaaccgt 571
>gb|L42849.1|PEDCPRGOL Pedinomonas minor large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2632 Score = 276 bits (139), Expect = 8e-71 Identities = 256/293 (87%), Gaps = 4/293 (1%) Strand = Plus / Plus Query: 289 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgg 348 ||||||||||||||||||||| |||||||||| |||||| |||| |||||||||| || Sbjct: 636 agccgtagcgaaagcgagtctgaatagggcgac-gtcactttttatagacccgaacccgg 694 Query: 349 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 408 |||||||| ||||| |||||||||||||||| | | | ||| ||||||||||||||| Sbjct: 695 gtgatctaaccatggccaggatgaagcttgggtaacaacaagtggaggtccgaaccgacc 754 Query: 409 gatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagag 468 ||||||||| |||| ||||||||| |||||||||||||||||| ||| |||||| | ||| Sbjct: 755 gatgttgaaaaatcggcggatgagctgtggttaggggtgaaataccaatcgaactcggag 814 Query: 469 ctagctggttctccccgaaatgcgttgaggcgcagcagt---tgactggacatctagggg 525 |||||||||||||||||||||||||||||||||||| || ||| || |||||||| Sbjct: 815 ctagctggttctccccgaaatgcgttgaggcgcagcggtaaatgatgggctgtctagggg 874 Query: 526 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaact 578 |||||| |||||||||||||||||||| ||||||||||||||| |||||||| Sbjct: 875 taaagctctgtttcggtgcgggctgcgaaagcggtaccaaatcgtggcaaact 927 Score = 137 bits (69), Expect = 5e-29 Identities = 133/153 (86%), Gaps = 1/153 (0%) Strand = Plus / Plus Query: 26 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 85 |||||||||| |||| |||||| ||||||| |||||||||| |||||||||| | ||||| Sbjct: 369 cccgagtagcctgggacacgtgaaatcccgggtgaatcagcgaggaccacctcgtaaggc 428 Query: 86 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa-agaacc 144 ||||||||||| ||||||||||| ||| ||||||| ||||||||||||||| |||||| Sbjct: 429 taaatactcctaagtgaccgatagtgaacaagtaccgcgagggaaaggtgaaatagaacc 488 Query: 145 cccagtgggtagtgaaatagaacgtgaaaccgt 177 || ||| ||||||||||||| ||||||||| Sbjct: 489 cctgaaggggagtgaaatagaacatgaaaccgt 521 Score = 101 bits (51), Expect = 3e-18 Identities = 57/59 (96%) Strand = Plus / Plus Query: 212 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 270 |||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||| Sbjct: 560 ctctgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggcttggttaa 618
>gb|AF393605.1| Pedinomonas minor small subunit ribosomal RNA (rrs) gene, complete sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; and large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; chloroplast genes for chloroplast products Length = 5057 Score = 276 bits (139), Expect = 8e-71 Identities = 256/293 (87%), Gaps = 4/293 (1%) Strand = Plus / Plus Query: 289 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgg 348 ||||||||||||||||||||| |||||||||| |||||| |||| |||||||||| || Sbjct: 2518 agccgtagcgaaagcgagtctgaatagggcgac-gtcactttttatagacccgaacccgg 2576 Query: 349 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 408 |||||||| ||||| |||||||||||||||| | | | ||| ||||||||||||||| Sbjct: 2577 gtgatctaaccatggccaggatgaagcttgggtaacaacaagtggaggtccgaaccgacc 2636 Query: 409 gatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagag 468 ||||||||| |||| ||||||||| |||||||||||||||||| ||| |||||| | ||| Sbjct: 2637 gatgttgaaaaatcggcggatgagctgtggttaggggtgaaataccaatcgaactcggag 2696 Query: 469 ctagctggttctccccgaaatgcgttgaggcgcagcagt---tgactggacatctagggg 525 |||||||||||||||||||||||||||||||||||| || ||| || |||||||| Sbjct: 2697 ctagctggttctccccgaaatgcgttgaggcgcagcggtaaatgatgggctgtctagggg 2756 Query: 526 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaact 578 |||||| |||||||||||||||||||| ||||||||||||||| |||||||| Sbjct: 2757 taaagctctgtttcggtgcgggctgcgaaagcggtaccaaatcgtggcaaact 2809 Score = 137 bits (69), Expect = 5e-29 Identities = 133/153 (86%), Gaps = 1/153 (0%) Strand = Plus / Plus Query: 26 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 85 |||||||||| |||| |||||| ||||||| |||||||||| |||||||||| | ||||| Sbjct: 2250 cccgagtagcctgggacacgtgaaatcccgggtgaatcagcgaggaccacctcgtaaggc 2309 Query: 86 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa-agaacc 144 ||||||||||| ||||||||||| ||| ||||||| ||||||||||||||| |||||| Sbjct: 2310 taaatactcctaagtgaccgatagtgaacaagtaccgcgagggaaaggtgaaatagaacc 2369 Query: 145 cccagtgggtagtgaaatagaacgtgaaaccgt 177 || ||| ||||||||||||| ||||||||| Sbjct: 2370 cctgaaggggagtgaaatagaacatgaaaccgt 2402 Score = 101 bits (51), Expect = 3e-18 Identities = 57/59 (96%) Strand = Plus / Plus Query: 212 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 270 |||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||| Sbjct: 2442 ctctgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggcttggttaa 2500
>emb|BX572100.1| Prochlorococcus marinus MIT9313 complete genome; segment 6/7 Length = 348071 Score = 274 bits (138), Expect = 3e-70 Identities = 195/214 (91%) Strand = Plus / Minus Query: 287 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 346 |||||| |||||||||||||||| ||||||||||| |||| || |||| |||||||||| Sbjct: 5974 ggagccatagcgaaagcgagtctgaatagggcgatcgtcagtgtttatagacccgaaccc 5915 Query: 347 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 406 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 5914 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 5855 Query: 407 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 466 ||||||||||| |||||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 5854 ctgatgttgaaaaatcagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 5795 Query: 467 agctagctggttctccccgaaatgcgttgaggcg 500 ||||||||||||||||||||||| |||||||||| Sbjct: 5794 agctagctggttctccccgaaatacgttgaggcg 5761 Score = 139 bits (70), Expect = 1e-29 Identities = 130/150 (86%) Strand = Plus / Minus Query: 26 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 85 ||||||||||| || ||||||| ||| ||||||||||| || |||||||||| | ||||| Sbjct: 6228 cccgagtagcacggagcacgtgaaattccgtgtgaatccgcgaggaccacctcgtaaggc 6169 Query: 86 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 145 ||| |||| ||| ||||||||||||| | ||||||| |||||||||||||||||||||| Sbjct: 6168 taagtactactgtgtgaccgatagcgcaacagtaccgcgagggaaaggtgaaaagaaccc 6109 Query: 146 ccagtgggtagtgaaatagaacgtgaaacc 175 | | ||| ||||||||||||| ||||||| Sbjct: 6108 cgggaggggagtgaaatagaacatgaaacc 6079 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Minus Query: 215 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 262 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 6041 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 5994 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Minus Query: 536 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 586 ||||||||||||||||| |||||||||| ||||||| |||||||||||| Sbjct: 5723 tttcggtgcgggctgcgagagcggtacctaatcgagatgaactctgaatac 5673
>emb|BX572095.1| Prochlorococcus marinus MIT9313 complete genome; segment 1/7 Length = 349391 Score = 274 bits (138), Expect = 3e-70 Identities = 195/214 (91%) Strand = Plus / Plus Query: 287 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 346 |||||| |||||||||||||||| ||||||||||| |||| || |||| |||||||||| Sbjct: 211798 ggagccatagcgaaagcgagtctgaatagggcgatcgtcagtgtttatagacccgaaccc 211857 Query: 347 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 406 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 211858 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 211917 Query: 407 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 466 ||||||||||| |||||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 211918 ctgatgttgaaaaatcagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 211977 Query: 467 agctagctggttctccccgaaatgcgttgaggcg 500 ||||||||||||||||||||||| |||||||||| Sbjct: 211978 agctagctggttctccccgaaatacgttgaggcg 212011 Score = 139 bits (70), Expect = 1e-29 Identities = 130/150 (86%) Strand = Plus / Plus Query: 26 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 85 ||||||||||| || ||||||| ||| ||||||||||| || |||||||||| | ||||| Sbjct: 211544 cccgagtagcacggagcacgtgaaattccgtgtgaatccgcgaggaccacctcgtaaggc 211603 Query: 86 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 145 ||| |||| ||| ||||||||||||| | ||||||| |||||||||||||||||||||| Sbjct: 211604 taagtactactgtgtgaccgatagcgcaacagtaccgcgagggaaaggtgaaaagaaccc 211663 Query: 146 ccagtgggtagtgaaatagaacgtgaaacc 175 | | ||| ||||||||||||| ||||||| Sbjct: 211664 cgggaggggagtgaaatagaacatgaaacc 211693 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 215 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 262 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 211731 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 211778 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Plus Query: 536 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 586 ||||||||||||||||| |||||||||| ||||||| |||||||||||| Sbjct: 212049 tttcggtgcgggctgcgagagcggtacctaatcgagatgaactctgaatac 212099
>gb|L49157.1|STXCPRGOL Stigeoclonium helveticum chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 6393 Score = 274 bits (138), Expect = 3e-70 Identities = 222/247 (89%), Gaps = 6/247 (2%) Strand = Plus / Plus Query: 26 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 85 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 410 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 469 Query: 86 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 145 |||||||||||| ||||||||||||||| |||||||| |||||||||| ||||||||||| Sbjct: 470 taaatactcctgagtgaccgatagcgaaatagtaccgcgagggaaaggagaaaagaaccc 529 Query: 146 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 205 || | ||| ||||||||||||| ||||||||| | ||| |||||||||||| |||| Sbjct: 530 ccggaggggagtgaaatagaacatgaaaccgtcc---gctgacaagcagtggga--ggaa 584 Query: 206 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttg 265 | ||| ||||||||||||||||||||||||||||||||||||| ||||| ||||||||| Sbjct: 585 atagat-tctgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggcttg 643 Query: 266 gttaagg 272 ||||||| Sbjct: 644 gttaagg 650 Score = 63.9 bits (32), Expect = 5e-07 Identities = 153/191 (80%), Gaps = 3/191 (1%) Strand = Plus / Plus Query: 399 cgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactc 458 ||||| ||| ||||||||| |||| || |||||| |||| ||| || ||||| ||| || Sbjct: 1427 cgaacggaccgatgttgaaaaatcggccgatgagctgtgtctagcggagaaattccaatc 1486 Query: 459 gaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt--gactggac 516 ||| | ||||||||||| |||| ||||||| ||||||||| ||| || ||| || Sbjct: 1487 gaattccgagctagctggatctctccgaaatttgttgaggcgaagcggtgacgacgggct 1546 Query: 517 atctaggggtaaagc-actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaa 575 || |||||||||| || |||||||||||||||||| |||||||||||| ||| | | | Sbjct: 1547 gccttggggtaaagctaccgtttcggtgcgggctgcgagagcggtaccaagtcgtgacga 1606 Query: 576 actctgaatac 586 |||| |||||| Sbjct: 1607 actcagaatac 1617 Score = 50.1 bits (25), Expect = 0.008 Identities = 46/53 (86%) Strand = Plus / Plus Query: 323 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagc 375 |||||| |||||||||||||||| || ||||||| |||| |||| ||||||| Sbjct: 722 gtcacttcttatggacccgaaccgggatgatctaggcatggccagaatgaagc 774
>gb|L43357.1|CHLCPRRNL Chlorella vulgaris chloroplast large subunit ribosomal RNA (rrnL) gene Length = 3669 Score = 274 bits (138), Expect = 3e-70 Identities = 265/305 (86%), Gaps = 3/305 (0%) Strand = Plus / Plus Query: 285 ccggagccgtagcgaaagcgagtcttaatagggcgatt--gtcactgcttatggacccga 342 ||||||||| ||||||||| ||||| ||||||||||| |||| || | ||||||| Sbjct: 621 ccggagccgaagcgaaagcaagtctgaatagggcgataaagtcatattttctagacccga 680 Query: 343 acctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaa 402 ||| |||||||||| |||||||||||||||||||||| ||| || ||| ||||||||| Sbjct: 681 acccgggtgatctaaccatgaccaggatgaagcttgggtgacaccaagtgaaggtccgaa 740 Query: 403 ccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaac 462 ||||| ||||||||| |||| ||||||||||||||||||| |||||||| ||| |||||| Sbjct: 741 ccgaccgatgttgaaaaatcggcggatgagttgtggttagcggtgaaataccagtcgaac 800 Query: 463 ccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga-ctggacatcta 521 | ||||||||||||||||||||||||||||||||||||||| ||| | || | || Sbjct: 801 tcggagctagctggttctccccgaaatgcgttgaggcgcagcggtttataaggctgttta 860 Query: 522 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 581 ||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||| Sbjct: 861 ggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgtggcaaactctg 920 Query: 582 aatac 586 ||||| Sbjct: 921 aatac 925 Score = 194 bits (98), Expect = 2e-46 Identities = 137/150 (91%) Strand = Plus / Plus Query: 26 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 85 ||||||||||||||| |||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 371 cccgagtagcatgggacacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 430 Query: 86 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 145 ||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 431 taaatactcctaggtgaccgatagcgaactagtaccgtgagggaaaggtgaaaagaaccc 490 Query: 146 ccagtgggtagtgaaatagaacgtgaaacc 175 | ||| ||||||||||||| ||||||| Sbjct: 491 ctgtaggggagtgaaatagaacatgaaacc 520 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 214 ctgaccgcgtgcctgttgaagaatgagccggcgact 249 |||||||||||||||||||||||||||||||||||| Sbjct: 554 ctgaccgcgtgcctgttgaagaatgagccggcgact 589
>gb|DQ312949.1| Uncultured bacterium clone 3M6B 23S ribosomal RNA gene, partial sequence Length = 806 Score = 274 bits (138), Expect = 3e-70 Identities = 195/214 (91%) Strand = Plus / Plus Query: 287 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 346 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 485 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaaccc 544 Query: 347 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 406 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 545 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 604 Query: 407 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 466 ||||||||||| |||||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 605 ctgatgttgaaaaatcagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 664 Query: 467 agctagctggttctccccgaaatgcgttgaggcg 500 ||||||||||||||||||||||| |||||||||| Sbjct: 665 agctagctggttctccccgaaatacgttgaggcg 698 Score = 168 bits (85), Expect = 1e-38 Identities = 136/153 (88%) Strand = Plus / Plus Query: 26 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 85 ||||||||||| || ||||||| ||| |||||||||||||| |||||||||| | ||||| Sbjct: 232 cccgagtagcacggagcacgtgaaattccgtgtgaatcagcgaggaccacctcgtaaggc 291 Query: 86 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 145 ||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 292 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 351 Query: 146 ccagtgggtagtgaaatagaacgtgaaaccgtg 178 | | ||| ||||||||||||| |||||||||| Sbjct: 352 cgggaggggagtgaaatagaacatgaaaccgtg 384 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 215 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 262 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 418 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 465 Score = 69.9 bits (35), Expect = 9e-09 Identities = 47/51 (92%) Strand = Plus / Plus Query: 536 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 586 ||||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 736 tttcggtgcgggctgcgagagcggtaccaaatcgagatgaactctgaatac 786
>dbj|AB001684.1| Chlorella vulgaris C-27 chloroplast DNA, complete sequence Length = 150613 Score = 274 bits (138), Expect = 3e-70 Identities = 265/305 (86%), Gaps = 3/305 (0%) Strand = Plus / Plus Query: 285 ccggagccgtagcgaaagcgagtcttaatagggcgatt--gtcactgcttatggacccga 342 ||||||||| ||||||||| ||||| ||||||||||| |||| || | ||||||| Sbjct: 25430 ccggagccgaagcgaaagcaagtctgaatagggcgataaagtcatattttctagacccga 25489 Query: 343 acctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaa 402 ||| |||||||||| |||||||||||||||||||||| ||| || ||| ||||||||| Sbjct: 25490 acccgggtgatctaaccatgaccaggatgaagcttgggtgacaccaagtgaaggtccgaa 25549 Query: 403 ccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaac 462 ||||| ||||||||| |||| ||||||||||||||||||| |||||||| ||| |||||| Sbjct: 25550 ccgaccgatgttgaaaaatcggcggatgagttgtggttagcggtgaaataccagtcgaac 25609 Query: 463 ccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga-ctggacatcta 521 | ||||||||||||||||||||||||||||||||||||||| ||| | || | || Sbjct: 25610 tcggagctagctggttctccccgaaatgcgttgaggcgcagcggtttataaggctgttta 25669 Query: 522 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 581 ||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||| Sbjct: 25670 ggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgtggcaaactctg 25729 Query: 582 aatac 586 ||||| Sbjct: 25730 aatac 25734 Score = 194 bits (98), Expect = 2e-46 Identities = 137/150 (91%) Strand = Plus / Plus Query: 26 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 85 ||||||||||||||| |||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 25180 cccgagtagcatgggacacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 25239 Query: 86 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 145 ||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 25240 taaatactcctaggtgaccgatagcgaactagtaccgtgagggaaaggtgaaaagaaccc 25299 Query: 146 ccagtgggtagtgaaatagaacgtgaaacc 175 | ||| ||||||||||||| ||||||| Sbjct: 25300 ctgtaggggagtgaaatagaacatgaaacc 25329 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 214 ctgaccgcgtgcctgttgaagaatgagccggcgact 249 |||||||||||||||||||||||||||||||||||| Sbjct: 25363 ctgaccgcgtgcctgttgaagaatgagccggcgact 25398
>gb|U38804.1|PPU38804 Porphyra purpurea chloroplast, complete genome Length = 191028 Score = 274 bits (138), Expect = 3e-70 Identities = 313/367 (85%), Gaps = 7/367 (1%) Strand = Plus / Plus Query: 222 gtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaac 281 |||| ||||||||||||||||||||||| ||| | |||||| |||||||| || | | Sbjct: 188572 gtgcatgttgaagaatgagccggcgacttataagtagtggca-ggttaaggtaaagaat- 188629 Query: 282 ccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccg 341 |||| |||| || ||||||||| | ||||| ||| | |||||| |||| |||||| Sbjct: 188630 --accgaagccaaagtgaaagcgagcttgaatagagcgttggtcactatttatagacccg 188687 Query: 342 aacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccga 401 |||| || ||||||| ||||| ||||| |||||||| | | | |||||| ||||||||| Sbjct: 188688 aacccggatgatctagccatggccagggtgaagcttaggtaacactaagtggaggtccga 188747 Query: 402 accgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaa 461 ||||||| |||||||| ||| |||||||||||||||| |||||||||||||||| ||||| Sbjct: 188748 accgactaatgttgaaaaattagcggatgagttgtggctaggggtgaaatgccaatcgaa 188807 Query: 462 cccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga--ctggacatc 519 || ||||||||||||||||||||||||| ||||||||||||| ||||| || | | Sbjct: 188808 tccggagctagctggttctccccgaaatgtgttgaggcgcagcggttgatgct-taaact 188866 Query: 520 taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactc 579 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 188867 taggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactc 188926 Query: 580 tgaatac 586 ||||||| Sbjct: 188927 tgaatac 188933 Score = 272 bits (137), Expect = 1e-69 Identities = 318/374 (85%), Gaps = 7/374 (1%) Strand = Plus / Plus Query: 215 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 274 ||||| ||||| ||||||||||||||||||||||| ||| | |||||| |||||||| | Sbjct: 150122 tgacctcgtgcatgttgaagaatgagccggcgacttataagtagtggca-ggttaaggta 150180 Query: 275 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 334 | | | |||| |||| || ||||||||| | ||||| ||| | |||||| |||| Sbjct: 150181 aagaat---accgaagccaaagtgaaagcgagcttgaatagagcgttggtcactatttat 150237 Query: 335 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcaga 394 |||||||||| || ||||||| ||||| ||||| |||||||| | | | |||||| || Sbjct: 150238 agacccgaacccggatgatctagccatggccagggtgaagcttaggtaacactaagtgga 150297 Query: 395 ggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcc 454 ||||||| |||||| |||||||| ||| |||||||||||||||| ||||||||||||||| Sbjct: 150298 ggtccgagccgactaatgttgaaaaattagcggatgagttgtggctaggggtgaaatgcc 150357 Query: 455 actcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga--ct 512 | ||||| || ||||||||||||||||||||||||| ||||||||||||| ||||| || Sbjct: 150358 aatcgaatccggagctagctggttctccccgaaatgtgttgaggcgcagcggttgatgct 150417 Query: 513 ggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgagg 572 | | ||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 150418 -taaacttaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgagg 150476 Query: 573 caaactctgaatac 586 |||||||||||||| Sbjct: 150477 caaactctgaatac 150490 Score = 167 bits (84), Expect = 5e-38 Identities = 132/148 (89%) Strand = Plus / Plus Query: 30 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 89 ||||||| |||||||||| |||||||||||||||||| |||||||||| ||||||||||| Sbjct: 188383 agtagcacggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgcaaggctaaa 188442 Query: 90 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 149 || | ||| |||||||||| ||| |||||||||||||||||||||||||||||||| | Sbjct: 188443 tattactgaatgaccgatagtgaaatagtaccgtgagggaaaggtgaaaagaaccccggg 188502 Query: 150 tgggtagtgaaatagaacgtgaaaccgt 177 ||| ||||||||||||| |||| |||| Sbjct: 188503 aggggagtgaaatagaacatgaacccgt 188530 Score = 159 bits (80), Expect = 1e-35 Identities = 131/148 (88%) Strand = Plus / Plus Query: 30 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 89 ||||||| |||||||||| |||||||||||||||||| |||||||||| | ||||||||| Sbjct: 149940 agtagcacggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggctaaa 149999 Query: 90 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 149 || | ||| |||||||||| ||| |||||||||||||||||||||||||||||||| | Sbjct: 150000 tattactgaatgaccgatagtgaaatagtaccgtgagggaaaggtgaaaagaaccccggg 150059 Query: 150 tgggtagtgaaatagaacgtgaaaccgt 177 ||| ||||||||||||| |||| |||| Sbjct: 150060 aggggagtgaaatagaacatgaacccgt 150087
>gb|AY330870.1| Cynomorium coccineum clone Cyno_1 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 272 bits (137), Expect = 1e-69 Identities = 317/374 (84%), Gaps = 6/374 (1%) Strand = Plus / Plus Query: 212 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 271 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 272 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 331 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 602 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 656 Query: 332 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 391 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 657 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 716 Query: 392 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 451 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 717 ggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 776 Query: 452 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 511 | || ||||||||| |||||||||||||||||||||||||||| ||||| ||| | | | Sbjct: 777 gtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccg-tatc 835 Query: 512 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 571 ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| ||| Sbjct: 836 cagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgag 895 Query: 572 gcaaactctgaata 585 ||||||| |||||| Sbjct: 896 gcaaactatgaata 909 Score = 214 bits (108), Expect = 2e-52 Identities = 153/168 (91%) Strand = Plus / Plus Query: 6 atcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcag 65 |||| ||||||||||| |||||||||||||||||| |||| |||||||||||||||||| Sbjct: 342 atcattagcttatgctttgacccgagtagcatgggacacggagaatcccgtgtgaatcag 401 Query: 66 caaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtga 125 |||||||||||||||||||||| |||||| ||||||||| |||| ||||||||||||||| Sbjct: 402 caaggaccaccttgcaaggctagatactcttgggtgaccaatagtgaagtagtaccgtga 461 Query: 126 gggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaa 173 ||||| |||||||||||||| | |||| ||||||||||||| ||||| Sbjct: 462 gggaagggtgaaaagaacccttattggggagtgaaatagaacatgaaa 509
>gb|L44126.1|SFFCPRGOL Scherffelia dubia chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 3334 Score = 270 bits (136), Expect = 5e-69 Identities = 224/251 (89%), Gaps = 3/251 (1%) Strand = Plus / Plus Query: 331 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 390 |||| |||||||||||| |||||||| |||||||||||||||||||||| | |||| ||| Sbjct: 687 ttatagacccgaacctgagtgatctaaccatgaccaggatgaagcttgggtaaaaccaag 746 Query: 391 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 450 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 747 tggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaa 806 Query: 451 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 510 ||||| |||||| ||||||||||||| ||||| ||||||||||||||||||||| |||| Sbjct: 807 tgccaatcgaactcagagctagctggatctcctcgaaatgcgttgaggcgcagcggttgt 866 Query: 511 c--tggacatct-aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 567 | ||| | | | |||||||||||||||||||| ||||||||| | ||||||||||||| Sbjct: 867 cgatgggcttttaaggggtaaagcactgtttcgatgcgggctgtgaaagcggtaccaaat 926 Query: 568 cgaggcaaact 578 || ||||||| Sbjct: 927 cgttgcaaact 937 Score = 159 bits (80), Expect = 1e-35 Identities = 135/152 (88%), Gaps = 1/152 (0%) Strand = Plus / Plus Query: 27 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 86 ||||||||||||||||||||| ||||||||||||||| || |||||||||| | |||||| Sbjct: 382 ccgagtagcatggggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaaggct 441 Query: 87 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg-aaaagaaccc 145 ||||||||||| || |||||||| |||||||||||| |||||||||||| |||||||||| Sbjct: 442 aaatactcctgagtcaccgatagtgaagtagtaccgcgagggaaaggtgaaaaagaaccc 501 Query: 146 ccagtgggtagtgaaatagaacgtgaaaccgt 177 | ||| ||||||| ||||| ||||||||| Sbjct: 502 ctgtaggggagtgaaaaagaacatgaaaccgt 533 Score = 65.9 bits (33), Expect = 1e-07 Identities = 45/49 (91%) Strand = Plus / Plus Query: 214 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 262 |||||||||| ||||||||||||||| ||||||||| ||||| |||||| Sbjct: 570 ctgaccgcgtacctgttgaagaatgaaccggcgacttataggaagtggc 618
>gb|AF393609.1| Scherffelia dubia small subunit ribosomal RNA (rrs) gene, complete sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) gene, complete sequence; and putative site-specific DNA endonuclease (orf167) gene, complete cds; chloroplast genes for chloroplast products Length = 5476 Score = 270 bits (136), Expect = 5e-69 Identities = 224/251 (89%), Gaps = 3/251 (1%) Strand = Plus / Plus Query: 331 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 390 |||| |||||||||||| |||||||| |||||||||||||||||||||| | |||| ||| Sbjct: 2425 ttatagacccgaacctgagtgatctaaccatgaccaggatgaagcttgggtaaaaccaag 2484 Query: 391 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 450 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 2485 tggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaa 2544 Query: 451 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 510 ||||| |||||| ||||||||||||| ||||| ||||||||||||||||||||| |||| Sbjct: 2545 tgccaatcgaactcagagctagctggatctcctcgaaatgcgttgaggcgcagcggttgt 2604 Query: 511 c--tggacatct-aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 567 | ||| | | | |||||||||||||||||||| ||||||||| | ||||||||||||| Sbjct: 2605 cgatgggcttttaaggggtaaagcactgtttcgatgcgggctgtgaaagcggtaccaaat 2664 Query: 568 cgaggcaaact 578 || ||||||| Sbjct: 2665 cgttgcaaact 2675 Score = 161 bits (81), Expect = 3e-36 Identities = 136/153 (88%), Gaps = 1/153 (0%) Strand = Plus / Plus Query: 26 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 85 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 2119 cccgagtagcatggggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaaggc 2178 Query: 86 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg-aaaagaacc 144 |||||||||||| || |||||||| |||||||||||| |||||||||||| ||||||||| Sbjct: 2179 taaatactcctgagtcaccgatagtgaagtagtaccgcgagggaaaggtgaaaaagaacc 2238 Query: 145 cccagtgggtagtgaaatagaacgtgaaaccgt 177 || ||| ||||||| ||||| ||||||||| Sbjct: 2239 cctgtaggggagtgaaaaagaacatgaaaccgt 2271 Score = 65.9 bits (33), Expect = 1e-07 Identities = 45/49 (91%) Strand = Plus / Plus Query: 214 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 262 |||||||||| ||||||||||||||| ||||||||| ||||| |||||| Sbjct: 2308 ctgaccgcgtacctgttgaagaatgaaccggcgacttataggaagtggc 2356
>emb|AM084273.1| Paulinella chromatophora plastid 16S rRNA gene (partial), 23S rRNA gene (partial), tRNA-Ile gene, tRNA-Ala gene and ITS1, strain M 0880 Length = 4934 Score = 270 bits (136), Expect = 5e-69 Identities = 251/286 (87%), Gaps = 5/286 (1%) Strand = Plus / Plus Query: 215 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 274 |||||| |||||||||||||||||||||||||||| ||||| | |||| ||||||||| Sbjct: 2776 tgaccgtgtgcctgttgaagaatgagccggcgacttataggtactggca-ggttaaggg- 2833 Query: 275 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 334 |||| | |||||||| ||||||||||||||| ||||||||||| |||| | |||| Sbjct: 2834 --ggaaatc-ccggagccacagcgaaagcgagtctgaatagggcgatggtcagtatttat 2890 Query: 335 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcaga 394 |||||||||| |||||||||| ||||| |||||||||||||||| ||| || | | || Sbjct: 2891 agacccgaacccgggtgatctaaccatggccaggatgaagcttgggtgataccacgtgga 2950 Query: 395 ggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcc 454 ||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||| Sbjct: 2951 ggtccgaaccgactgatgttgaaaaatcagcggatgagctgtggttaggggtgaaatgcc 3010 Query: 455 actcgaacccagagctagctggttctccccgaaatgcgttgaggcg 500 | |||||||| |||||||||||||||||||||||| |||| ||||| Sbjct: 3011 aatcgaacccggagctagctggttctccccgaaatacgtttaggcg 3056 Score = 168 bits (85), Expect = 1e-38 Identities = 136/153 (88%) Strand = Plus / Plus Query: 26 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 85 ||||||||||| || ||||||||||| ||||||||||| || |||||||||| | ||||| Sbjct: 2590 cccgagtagcacggagcacgtggaattccgtgtgaatctgcgaggaccacctcgtaaggc 2649 Query: 86 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 145 ||| |||||||| ||||||||||| |||| ||||||| |||||||||||||||||||||| Sbjct: 2650 taagtactcctgtgtgaccgatagtgaagcagtaccgcgagggaaaggtgaaaagaaccc 2709 Query: 146 ccagtgggtagtgaaatagaacgtgaaaccgtg 178 | | ||| ||||||||||||| |||||||||| Sbjct: 2710 cgggaggggagtgaaatagaacatgaaaccgtg 2742 Score = 91.7 bits (46), Expect = 2e-15 Identities = 62/66 (93%), Gaps = 1/66 (1%) Strand = Plus / Plus Query: 522 ggggtaaagc-actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 580 |||||||||| ||||||||||| ||||||||| |||||||||||||||||| |||||||| Sbjct: 3079 ggggtaaagccactgtttcggtacgggctgcgagagcggtaccaaatcgagacaaactct 3138 Query: 581 gaatac 586 |||||| Sbjct: 3139 gaatac 3144
>gb|AY584519.1| Nostoc punctiforme strain ATCC 29133 23S ribosomal RNA gene, partial sequence Length = 2446 Score = 266 bits (134), Expect = 7e-68 Identities = 255/292 (87%), Gaps = 5/292 (1%) Strand = Plus / Plus Query: 298 gaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctat 357 |||| ||||||| || |||||||| ||| || |||| |||||||||| ||||||||| Sbjct: 262 gaaaccgagtctgaaaagggcgataatcagtgtttatagacccgaaccctggtgatctaa 321 Query: 358 ccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaa 417 ||||| |||||||||||||||| | | || ||| ||||||||||||||||||||||||| Sbjct: 322 ccatggccaggatgaagcttgggtaacaccaagtggaggtccgaaccgactgatgttgaa 381 Query: 418 gaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggt 477 ||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 382 aaatcagcggatgagttgtggttaggggtgaaatgccaatcgaaccaggagctagctggt 441 Query: 478 tctccccgaaatgcgttgaggcgcagcagt--tgactggacatctag-gggtaaagcact 534 ||||||||||||| ||| ||||||||| || ||| | | |||| | |||||||||||| Sbjct: 442 tctccccgaaatgtgtttaggcgcagcggtaatgatt--atatctggggggtaaagcact 499 Query: 535 gtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 586 |||||||||||||||| | || ||||||||||||||| |||||||||||||| Sbjct: 500 gtttcggtgcgggctgggagaccggtaccaaatcgagacaaactctgaatac 551 Score = 196 bits (99), Expect = 6e-47 Identities = 197/229 (86%), Gaps = 3/229 (1%) Strand = Plus / Plus Query: 29 gagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaa 88 ||||||||||||||||| |||||||| ||||||||||| |||||||||| | |||||||| Sbjct: 1 gagtagcatggggcacgaggaatcccatgtgaatcagcgaggaccacctcgtaaggctaa 60 Query: 89 atactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccca 148 ||||| ||| ||||||||||| ||| ||||||| ||||||||||||||||||||||| Sbjct: 61 atactactgtgtgaccgatagtgaaccagtaccgcgagggaaaggtgaaaagaaccccgg 120 Query: 149 gtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagt 208 ||| ||||||||||||| |||||||| | |||| |||||||||||||| | | Sbjct: 121 aaggggagtgaaatagaacatgaaaccg---ttagcttacaagcagtgggaggactattt 177 Query: 209 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 257 | ||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 178 aaagtctgaccgcgtgcctgttgaagaatgagccggcgacttataggca 226
>gb|AY330883.1| Cynomorium coccineum clone Cyno_14 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 266 bits (134), Expect = 7e-68 Identities = 228/258 (88%), Gaps = 1/258 (0%) Strand = Plus / Plus Query: 328 tgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaact 387 |||||||||||| ||| || |||||||| ||||||||| |||||| || | ||||||| Sbjct: 653 tgcttatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaact 712 Query: 388 aagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtg 447 ||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 713 aagtggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtg 772 Query: 448 aaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagt 507 ||||| || ||||||||| |||||||||||||||||||||||||||| ||||| ||| || Sbjct: 773 aaatgtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgt 832 Query: 508 tgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 567 | || ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| Sbjct: 833 t-accagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaat 891 Query: 568 cgaggcaaactctgaata 585 |||||||||| |||||| Sbjct: 892 tgaggcaaactatgaata 909 Score = 214 bits (108), Expect = 2e-52 Identities = 153/168 (91%) Strand = Plus / Plus Query: 6 atcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcag 65 |||| ||||||||||| |||||||||||||||||| |||| |||||||||||||||||| Sbjct: 342 atcattagcttatgctttgacccgagtagcatgggacacggagaatcccgtgtgaatcag 401 Query: 66 caaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtga 125 |||||||||||||||||||||| |||||| ||||||||| |||| ||||||||||||||| Sbjct: 402 caaggaccaccttgcaaggctagatactcttgggtgaccaatagtgaagtagtaccgtga 461 Query: 126 gggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaa 173 ||||| |||||||||||||| | |||| ||||||||||||| ||||| Sbjct: 462 gggaagggtgaaaagaacccttattggggagtgaaatagaacatgaaa 509 Score = 60.0 bits (30), Expect = 9e-06 Identities = 54/62 (87%) Strand = Plus / Plus Query: 212 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 271 |||||||| ||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccacgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 272 gg 273 || Sbjct: 602 gg 603
>gb|AE017126.1| Prochlorococcus marinus subsp. marinus str. CCMP1375 complete genome Length = 1751080 Score = 266 bits (134), Expect = 7e-68 Identities = 194/214 (90%) Strand = Plus / Plus Query: 287 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 346 |||||| |||||||||||||||||||||||||| |||||| || |||| |||||||||| Sbjct: 356101 ggagccatagcgaaagcgagtcttaatagggcgtttgtcagtgtttatagacccgaaccc 356160 Query: 347 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 406 ||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 356161 tggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 356220 Query: 407 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 466 ||||||||||| |||||||||||||| |||||||||||||||||||||| ||||||| | Sbjct: 356221 ctgatgttgaaaaatcagcggatgagctgtggttaggggtgaaatgccaatcgaaccagg 356280 Query: 467 agctagctggttctccccgaaatgcgttgaggcg 500 ||||||||||||||||||||||| |||||||||| Sbjct: 356281 agctagctggttctccccgaaatacgttgaggcg 356314 Score = 153 bits (77), Expect = 8e-34 Identities = 134/153 (87%) Strand = Plus / Plus Query: 26 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 85 |||||||| || || ||||||||||| ||||||||||| | |||||||||| | ||||| Sbjct: 355848 cccgagtaacacggagcacgtggaattccgtgtgaatctacgaggaccacctcgtaaggc 355907 Query: 86 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 145 ||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 355908 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 355967 Query: 146 ccagtgggtagtgaaatagaacgtgaaaccgtg 178 | | ||| ||||||||||||| |||||||||| Sbjct: 355968 cgggaggggagtgaaatagaacatgaaaccgtg 356000 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 215 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 262 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 356034 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 356081 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 536 tttcggtgcgggctgcgcgagcggtaccaaatcga 570 ||||||||||||||||| |||||||||||||||| Sbjct: 356352 tttcggtgcgggctgcgaaagcggtaccaaatcga 356386
>gb|L42852.1|PDFCPRGOL Pseudoscourfieldia marina large subunit ribosomal RNA (rrnL) gene, partial sequence; chloroplast gene for chloroplast product Length = 2571 Score = 264 bits (133), Expect = 3e-67 Identities = 260/301 (86%), Gaps = 6/301 (1%) Strand = Plus / Plus Query: 284 accggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaa 343 ||||||||| ||||||||||||||| ||||||||| ||||||| ||| |||||||| Sbjct: 624 accggagccagagcgaaagcgagtctgaatagggcgcatgtcacttgttaaagacccgaa 683 Query: 344 cctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaac 403 || |||||||||| ||||| |||||| ||||||||| |||||| | || |||||||| Sbjct: 684 cccgggtgatctaaccatggccaggaggaagcttgggtgaaaccttgtggaagtccgaac 743 Query: 404 cgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacc 463 |||| || |||||||| || |||||||||||||||||||||||||||| ||| |||||| Sbjct: 744 cgaccgacgttgaagagtcggcggatgagttgtggttaggggtgaaataccagtcgaact 803 Query: 464 cagagctagctggttctccccgaaatgcgttgaggcgcagcagttga-----ctggaca- 517 | ||||||||||||||||||||||||||||||||||||||| || || ||| || Sbjct: 804 cggagctagctggttctccccgaaatgcgttgaggcgcagcggtcgattaagatgggcag 863 Query: 518 tctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaac 577 ||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||| Sbjct: 864 tctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgtagcaaac 923 Query: 578 t 578 | Sbjct: 924 t 924 Score = 242 bits (122), Expect = 1e-60 Identities = 217/247 (87%), Gaps = 5/247 (2%) Strand = Plus / Plus Query: 26 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 85 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 376 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 435 Query: 86 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 145 || |||||||| |||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 436 tacatactcctaggtgaccgatagcgaactagtaccgtgagggaaaggtgaaaagaaccc 495 Query: 146 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 205 || ||| ||||||| ||| | |||||||| || ||| |||||||||||||||| Sbjct: 496 ccgcaggggagtgaaaaagatcatgaaaccg---tgtgcttacaagcagtgggagggg-- 550 Query: 206 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttg 265 ||| | |||||||||||||||||||||||||||||||||||| ||| ||||||||| Sbjct: 551 cctgagccctgaccgcgtgcctgttgaagaatgagccggcgacttttagcaagtggcttg 610 Query: 266 gttaagg 272 ||||||| Sbjct: 611 gttaagg 617
>gb|AC137922.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0046A04, complete sequence Length = 141001 Score = 260 bits (131), Expect = 5e-66 Identities = 174/187 (93%), Gaps = 1/187 (0%) Strand = Plus / Plus Query: 2 aagcatcactagcttatgctctgaccc-gagtagcatggggcacgtggaatcccgtgtga 60 |||||||||||||||| ||||| |||| |||||||||||| ||||||||||| |||||| Sbjct: 95275 aagcatcactagcttacgctctaaccccgagtagcatgggaaacgtggaatcctgtgtga 95334 Query: 61 atcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtac 120 | || |||| ||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 95335 accaacaagagccaccttgcaaggctaaatactcctgggtgaccgatagcgatgtagtac 95394 Query: 121 cgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgct 180 ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 95395 ggtgagggaaaggtgaaaagaacccctagtgggtagtgaaatagaacgtgaaaccgtgct 95454 Query: 181 gagctcc 187 ||||||| Sbjct: 95455 gagctcc 95461
>gb|AC135558.6| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0007C02, complete sequence Length = 148265 Score = 260 bits (131), Expect = 5e-66 Identities = 174/187 (93%), Gaps = 1/187 (0%) Strand = Plus / Minus Query: 2 aagcatcactagcttatgctctgaccc-gagtagcatggggcacgtggaatcccgtgtga 60 |||||||||||||||| ||||| |||| |||||||||||| ||||||||||| |||||| Sbjct: 914 aagcatcactagcttacgctctaaccccgagtagcatgggaaacgtggaatcctgtgtga 855 Query: 61 atcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtac 120 | || |||| ||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 854 accaacaagagccaccttgcaaggctaaatactcctgggtgaccgatagcgatgtagtac 795 Query: 121 cgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgct 180 ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 794 ggtgagggaaaggtgaaaagaacccctagtgggtagtgaaatagaacgtgaaaccgtgct 735 Query: 181 gagctcc 187 ||||||| Sbjct: 734 gagctcc 728
>gb|DQ291132.1| Oltmannsiellopsis viridis chloroplast, complete genome Length = 151933 Score = 260 bits (131), Expect = 5e-66 Identities = 262/305 (85%), Gaps = 3/305 (0%) Strand = Plus / Plus Query: 285 ccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaac 344 |||||||| ||||||||| ||||| ||||||||| |||||||| ||||||||||||||| Sbjct: 137118 ccggagcctaagcgaaagcaagtctgaatagggcgtttgtcacttcttatggacccgaac 137177 Query: 345 ctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaacc 404 | |||||||||| |||||||||||||||||||||| | |||| ||| || | ||||||| Sbjct: 137178 ccgggtgatctaaccatgaccaggatgaagcttgggtaaaaccaagtggaagaccgaacc 137237 Query: 405 gactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccc 464 ||| ||||||||| |||| |||||||||||||||||||||| ||||| | | |||||| | Sbjct: 137238 gaccgatgttgaaaaatcggcggatgagttgtggttaggggagaaattctaatcgaactc 137297 Query: 465 agagctagctggttctccccgaaatgcgttgaggcgcagcagtt---gactggacatcta 521 |||||||||||||||| ||||||| ||||||||||||| ||| ||| || |||| Sbjct: 137298 ggagctagctggttctcttcgaaatgtgttgaggcgcagcggttggcgacgggctgtcta 137357 Query: 522 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 581 ||||||||||||||||||||||||||||| | | |||||||||||| |||||||| | Sbjct: 137358 ggggtaaagcactgtttcggtgcgggctgggaaactggtaccaaatcgtagcaaactcag 137417 Query: 582 aatac 586 ||||| Sbjct: 137418 aatac 137422 Score = 260 bits (131), Expect = 5e-66 Identities = 262/305 (85%), Gaps = 3/305 (0%) Strand = Plus / Minus Query: 285 ccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaac 344 |||||||| ||||||||| ||||| ||||||||| |||||||| ||||||||||||||| Sbjct: 48426 ccggagcctaagcgaaagcaagtctgaatagggcgtttgtcacttcttatggacccgaac 48367 Query: 345 ctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaacc 404 | |||||||||| |||||||||||||||||||||| | |||| ||| || | ||||||| Sbjct: 48366 ccgggtgatctaaccatgaccaggatgaagcttgggtaaaaccaagtggaagaccgaacc 48307 Query: 405 gactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccc 464 ||| ||||||||| |||| |||||||||||||||||||||| ||||| | | |||||| | Sbjct: 48306 gaccgatgttgaaaaatcggcggatgagttgtggttaggggagaaattctaatcgaactc 48247 Query: 465 agagctagctggttctccccgaaatgcgttgaggcgcagcagtt---gactggacatcta 521 |||||||||||||||| ||||||| ||||||||||||| ||| ||| || |||| Sbjct: 48246 ggagctagctggttctcttcgaaatgtgttgaggcgcagcggttggcgacgggctgtcta 48187 Query: 522 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 581 ||||||||||||||||||||||||||||| | | |||||||||||| |||||||| | Sbjct: 48186 ggggtaaagcactgtttcggtgcgggctgggaaactggtaccaaatcgtagcaaactcag 48127 Query: 582 aatac 586 ||||| Sbjct: 48126 aatac 48122 Score = 174 bits (88), Expect = 2e-40 Identities = 139/152 (91%), Gaps = 3/152 (1%) Strand = Plus / Plus Query: 26 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 85 ||||||||||||||||||||||||| ||||||||||||||| |||||||||| | ||||| Sbjct: 136865 cccgagtagcatggggcacgtggaaccccgtgtgaatcagcgaggaccacctcgtaaggc 136924 Query: 86 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa-agaacc 144 ||||||||| |||||||||||||| ||| |||||||||||||||||||||||| |||| | Sbjct: 136925 taaatactcttgggtgaccgatagtgaaatagtaccgtgagggaaaggtgaaatagaa-c 136983 Query: 145 cccagt-gggtagtgaaatagaacgtgaaacc 175 |||||| ||| |||| |||||||| ||||||| Sbjct: 136984 cccagtaggggagtgcaatagaacatgaaacc 137015 Score = 174 bits (88), Expect = 2e-40 Identities = 139/152 (91%), Gaps = 3/152 (1%) Strand = Plus / Minus Query: 26 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 85 ||||||||||||||||||||||||| ||||||||||||||| |||||||||| | ||||| Sbjct: 48679 cccgagtagcatggggcacgtggaaccccgtgtgaatcagcgaggaccacctcgtaaggc 48620 Query: 86 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa-agaacc 144 ||||||||| |||||||||||||| ||| |||||||||||||||||||||||| |||| | Sbjct: 48619 taaatactcttgggtgaccgatagtgaaatagtaccgtgagggaaaggtgaaatagaa-c 48561 Query: 145 cccagt-gggtagtgaaatagaacgtgaaacc 175 |||||| ||| |||| |||||||| ||||||| Sbjct: 48560 cccagtaggggagtgcaatagaacatgaaacc 48529 Score = 83.8 bits (42), Expect = 6e-13 Identities = 54/58 (93%) Strand = Plus / Plus Query: 215 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 272 ||||||||| ||||||||||||||||| ||||||| ||||| |||||||||||||||| Sbjct: 137053 tgaccgcgttcctgttgaagaatgagctggcgacttatagggagtggcttggttaagg 137110 Score = 83.8 bits (42), Expect = 6e-13 Identities = 54/58 (93%) Strand = Plus / Minus Query: 215 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 272 ||||||||| ||||||||||||||||| ||||||| ||||| |||||||||||||||| Sbjct: 48491 tgaccgcgttcctgttgaagaatgagctggcgacttatagggagtggcttggttaagg 48434
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 260 bits (131), Expect = 5e-66 Identities = 174/187 (93%), Gaps = 1/187 (0%) Strand = Plus / Plus Query: 2 aagcatcactagcttatgctctgaccc-gagtagcatggggcacgtggaatcccgtgtga 60 |||||||||||||||| ||||| |||| |||||||||||| ||||||||||| |||||| Sbjct: 11893548 aagcatcactagcttacgctctaaccccgagtagcatgggaaacgtggaatcctgtgtga 11893607 Query: 61 atcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtac 120 | || |||| ||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 11893608 accaacaagagccaccttgcaaggctaaatactcctgggtgaccgatagcgatgtagtac 11893667 Query: 121 cgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgct 180 ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 11893668 ggtgagggaaaggtgaaaagaacccctagtgggtagtgaaatagaacgtgaaaccgtgct 11893727 Query: 181 gagctcc 187 ||||||| Sbjct: 11893728 gagctcc 11893734 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Plus Query: 534 tgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 581 |||||| ||| ||||||||| ||||||| ||||| ||||||||||||| Sbjct: 18481121 tgtttcagtgtgggctgcgctagcggtaacaaattgaggcaaactctg 18481168 Score = 54.0 bits (27), Expect = 5e-04 Identities = 111/138 (80%), Gaps = 2/138 (1%) Strand = Plus / Plus Query: 235 aatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgt 294 ||||||||| |||||||| ||| ||| ||||||||| || || |||| |||| || Sbjct: 9056578 aatgagccgatgactcataagcaatggtttggttaagagagcgtaacctgtcggaattgt 9056637 Query: 295 agcgaaagcgagtcttaatagggcgattgtcactgcttatg--gacccgaacctgggtga 352 ||||||||||| |||||||||| | ||| ||||| |||| | || |||||| | ||||| Sbjct: 9056638 agcgaaagcgactcttaataggacaattttcactacttacggagatccgaacttaggtga 9056697 Query: 353 tctatccatgaccaggat 370 | |||||||||| ||||| Sbjct: 9056698 tttatccatgactaggat 9056715 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Plus Query: 180 tgagctcccaagcagtgggaggggaaagtgatc 212 |||||||||||| |||||||| ||||||||||| Sbjct: 9056543 tgagctcccaagtagtgggagaggaaagtgatc 9056575
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 260 bits (131), Expect = 5e-66 Identities = 174/187 (93%), Gaps = 1/187 (0%) Strand = Plus / Plus Query: 2 aagcatcactagcttatgctctgaccc-gagtagcatggggcacgtggaatcccgtgtga 60 |||||||||||||||| ||||| |||| |||||||||||| ||||||||||| |||||| Sbjct: 11971955 aagcatcactagcttacgctctaaccccgagtagcatgggaaacgtggaatcctgtgtga 11972014 Query: 61 atcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtac 120 | || |||| ||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 11972015 accaacaagagccaccttgcaaggctaaatactcctgggtgaccgatagcgatgtagtac 11972074 Query: 121 cgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgct 180 ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 11972075 ggtgagggaaaggtgaaaagaacccctagtgggtagtgaaatagaacgtgaaaccgtgct 11972134 Query: 181 gagctcc 187 ||||||| Sbjct: 11972135 gagctcc 11972141 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Plus Query: 534 tgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 581 |||||| ||| ||||||||| ||||||| ||||| ||||||||||||| Sbjct: 18640522 tgtttcagtgtgggctgcgctagcggtaacaaattgaggcaaactctg 18640569 Score = 54.0 bits (27), Expect = 5e-04 Identities = 111/138 (80%), Gaps = 2/138 (1%) Strand = Plus / Plus Query: 235 aatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgt 294 ||||||||| |||||||| ||| ||| ||||||||| || || |||| |||| || Sbjct: 9128275 aatgagccgatgactcataagcaatggtttggttaagagagcgtaacctgtcggaattgt 9128334 Query: 295 agcgaaagcgagtcttaatagggcgattgtcactgcttatg--gacccgaacctgggtga 352 ||||||||||| |||||||||| | ||| ||||| |||| | || |||||| | ||||| Sbjct: 9128335 agcgaaagcgactcttaataggacaattttcactacttacggagatccgaacttaggtga 9128394 Query: 353 tctatccatgaccaggat 370 | |||||||||| ||||| Sbjct: 9128395 tttatccatgactaggat 9128412 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Plus Query: 180 tgagctcccaagcagtgggaggggaaagtgatc 212 |||||||||||| |||||||| ||||||||||| Sbjct: 9128240 tgagctcccaagtagtgggagaggaaagtgatc 9128272
>gb|CP000110.1| Synechococcus sp. CC9605, complete genome Length = 2510659 Score = 258 bits (130), Expect = 2e-65 Identities = 193/214 (90%) Strand = Plus / Minus Query: 287 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 346 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 2138158 ggagccatagcgaaagcgagtctgaatagggcgcttgtcagtgtttatagacccgaaccc 2138099 Query: 347 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 406 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 2138098 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 2138039 Query: 407 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 466 |||| |||||| | |||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 2138038 ctgacgttgaaaagtcagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 2137979 Query: 467 agctagctggttctccccgaaatgcgttgaggcg 500 ||||||||||||||||||||||| |||||||||| Sbjct: 2137978 agctagctggttctccccgaaatacgttgaggcg 2137945 Score = 258 bits (130), Expect = 2e-65 Identities = 193/214 (90%) Strand = Plus / Plus Query: 287 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 346 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 476702 ggagccatagcgaaagcgagtctgaatagggcgcttgtcagtgtttatagacccgaaccc 476761 Query: 347 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 406 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 476762 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 476821 Query: 407 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 466 |||| |||||| | |||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 476822 ctgacgttgaaaagtcagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 476881 Query: 467 agctagctggttctccccgaaatgcgttgaggcg 500 ||||||||||||||||||||||| |||||||||| Sbjct: 476882 agctagctggttctccccgaaatacgttgaggcg 476915 Score = 153 bits (77), Expect = 8e-34 Identities = 134/153 (87%) Strand = Plus / Minus Query: 26 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 85 ||||||||||| || ||||||| ||| ||||||||||| || |||||||||| | ||||| Sbjct: 2138411 cccgagtagcacggagcacgtgaaattccgtgtgaatccgcgaggaccacctcgtaaggc 2138352 Query: 86 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 145 ||| |||| ||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 2138351 taagtactactgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 2138292 Query: 146 ccagtgggtagtgaaatagaacgtgaaaccgtg 178 | | ||| ||||||||||||| |||||||||| Sbjct: 2138291 cgggaggggagtgaaatagaacatgaaaccgtg 2138259 Score = 153 bits (77), Expect = 8e-34 Identities = 134/153 (87%) Strand = Plus / Plus Query: 26 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 85 ||||||||||| || ||||||| ||| ||||||||||| || |||||||||| | ||||| Sbjct: 476449 cccgagtagcacggagcacgtgaaattccgtgtgaatccgcgaggaccacctcgtaaggc 476508 Query: 86 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 145 ||| |||| ||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 476509 taagtactactgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 476568 Query: 146 ccagtgggtagtgaaatagaacgtgaaaccgtg 178 | | ||| ||||||||||||| |||||||||| Sbjct: 476569 cgggaggggagtgaaatagaacatgaaaccgtg 476601 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Minus Query: 215 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 262 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 2138225 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 2138178 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 215 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 262 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 476635 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 476682 Score = 69.9 bits (35), Expect = 9e-09 Identities = 47/51 (92%) Strand = Plus / Minus Query: 536 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 586 ||||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 2137907 tttcggtgcgggctgcgagagcggtaccaaatcgagatgaactctgaatac 2137857 Score = 69.9 bits (35), Expect = 9e-09 Identities = 47/51 (92%) Strand = Plus / Plus Query: 536 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 586 ||||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 476953 tttcggtgcgggctgcgagagcggtaccaaatcgagatgaactctgaatac 477003
>gb|AY584509.1| Anabaena cylindrica strain UTEX 629 23S ribosomal RNA gene, partial sequence Length = 2389 Score = 258 bits (130), Expect = 2e-65 Identities = 254/292 (86%), Gaps = 5/292 (1%) Strand = Plus / Plus Query: 298 gaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctat 357 |||| ||||||| || |||||||| ||| || |||| |||||||||| ||||||||| Sbjct: 262 gaaaccgagtctgaagagggcgataatcagtgtttatagacccgaaccctggtgatctaa 321 Query: 358 ccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaa 417 ||||| |||||||||||||||| | | || ||| ||||||||||||||||||||||||| Sbjct: 322 ccatggccaggatgaagcttgggtaacaccaagtggaggtccgaaccgactgatgttgaa 381 Query: 418 gaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggt 477 |||||||||||||| |||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 382 aaatcagcggatgagctgtggttaggggtgaaatgccaatcgaaccaggagctagctggt 441 Query: 478 tctccccgaaatgcgttgaggcgcagcagt--tgactggacatctag-gggtaaagcact 534 ||||||||||||| ||| ||||||||| || ||| | | |||| | |||||||||||| Sbjct: 442 tctccccgaaatgtgtttaggcgcagcggtaatgatt--atatctggggggtaaagcact 499 Query: 535 gtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 586 |||||||||||||||| | || ||||||||||||||| |||||||||||||| Sbjct: 500 gtttcggtgcgggctgggagaccggtaccaaatcgagacaaactctgaatac 551 Score = 149 bits (75), Expect = 1e-32 Identities = 129/147 (87%) Strand = Plus / Plus Query: 29 gagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaa 88 ||||||||||||||||| |||||||| ||||||||| | |||||||||| | |||||||| Sbjct: 1 gagtagcatggggcacgaggaatcccatgtgaatcaccgaggaccacctcgtaaggctaa 60 Query: 89 atactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccca 148 ||||| ||| ||||||||||| ||| ||||||| ||||||||||||||||||||||| Sbjct: 61 atactactgtgtgaccgatagtgaaccagtaccgcgagggaaaggtgaaaagaaccccgg 120 Query: 149 gtgggtagtgaaatagaacgtgaaacc 175 ||| ||||||||||||| ||||||| Sbjct: 121 aaggggagtgaaatagaacatgaaacc 147 Score = 77.8 bits (39), Expect = 4e-11 Identities = 42/43 (97%) Strand = Plus / Plus Query: 215 tgaccgcgtgcctgttgaagaatgagccggcgactcataggca 257 ||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 184 tgaccgcgtgcctgttgaagaatgagccggcgacttataggca 226
>gb|DQ174248.1| Phaeodactylum tricornutum 16S ribosomal RNA, tRNA-Ile, tRNA-Ala, 23S ribosomal RNA, and 5S ribosomal RNA genes, complete sequence; chloroplast Length = 5026 Score = 258 bits (130), Expect = 2e-65 Identities = 253/292 (86%), Gaps = 4/292 (1%) Strand = Plus / Plus Query: 213 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 272 |||||| |||||||||||||||||||||||||||||| ||| | |||||| |||||||| Sbjct: 2303 tctgactgcgtgcctgttgaagaatgagccggcgacttataagtagtggca-ggttaagg 2361 Query: 273 gaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgctt 332 | | | ||||||||| ||| ||||||||| || ||||||||| ||||||||| || Sbjct: 2362 tagagaat---accggagccatagtgaaagcgagcctgaatagggcgtttgtcactggtt 2418 Query: 333 atggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagca 392 || |||||||||| || ||||||| ||||| ||||| |||||||| | | | |||||| Sbjct: 2419 atagacccgaacccggatgatctaaccatggccaggttgaagcttaggtaatactaagtg 2478 Query: 393 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 452 |||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 2479 gaggaccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatg 2538 Query: 453 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagc 504 ||| ||||| | ||||||||||||||||||||||||||||| ||||||||| Sbjct: 2539 ccaatcgaattcggagctagctggttctccccgaaatgcgtttaggcgcagc 2590 Score = 147 bits (74), Expect = 5e-32 Identities = 129/146 (88%), Gaps = 1/146 (0%) Strand = Plus / Plus Query: 30 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 89 |||||||||| ||||||| ||| |||||||||||||| |||||||||| | ||||||||| Sbjct: 2123 agtagcatggagcacgtgaaattccgtgtgaatcagcgaggaccacctcgtaaggctaaa 2182 Query: 90 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 149 || ||||| |||||||||| ||| |||||||||||||||||||||||||||||||| | Sbjct: 2183 tattcctgaatgaccgatagtgaaatagtaccgtgagggaaaggtgaaaagaaccccggg 2242 Query: 150 tgggtagtgaaatagaacgtgaaacc 175 ||| ||||||| ||||| ||||||| Sbjct: 2243 aggggagtgaaa-agaacatgaaacc 2267
>emb|BX569694.1| Synechococcus sp. WH8102 complete genome; segment 6/7 Length = 349122 Score = 258 bits (130), Expect = 2e-65 Identities = 193/214 (90%) Strand = Plus / Minus Query: 287 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 346 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 339409 ggagccatagcgaaagcgagtctgaatagggcgcttgtcagtgtttatagacccgaaccc 339350 Query: 347 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 406 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 339349 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 339290 Query: 407 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 466 |||| |||||| | |||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 339289 ctgacgttgaaaagtcagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 339230 Query: 467 agctagctggttctccccgaaatgcgttgaggcg 500 ||||||||||||||||||||||| |||||||||| Sbjct: 339229 agctagctggttctccccgaaatacgttgaggcg 339196 Score = 258 bits (130), Expect = 2e-65 Identities = 193/214 (90%) Strand = Plus / Minus Query: 287 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 346 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 132469 ggagccatagcgaaagcgagtctgaatagggcgcttgtcagtgtttatagacccgaaccc 132410 Query: 347 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 406 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 132409 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 132350 Query: 407 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 466 |||| |||||| | |||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 132349 ctgacgttgaaaagtcagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 132290 Query: 467 agctagctggttctccccgaaatgcgttgaggcg 500 ||||||||||||||||||||||| |||||||||| Sbjct: 132289 agctagctggttctccccgaaatacgttgaggcg 132256 Score = 153 bits (77), Expect = 8e-34 Identities = 134/153 (87%) Strand = Plus / Minus Query: 26 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 85 ||||||||||| || ||||||| ||| ||||||||||| || |||||||||| | ||||| Sbjct: 339662 cccgagtagcacggagcacgtgaaattccgtgtgaatccgcgaggaccacctcgtaaggc 339603 Query: 86 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 145 ||| |||| ||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 339602 taagtactactgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 339543 Query: 146 ccagtgggtagtgaaatagaacgtgaaaccgtg 178 | | ||| ||||||||||||| |||||||||| Sbjct: 339542 cgggaggggagtgaaatagaacatgaaaccgtg 339510 Score = 153 bits (77), Expect = 8e-34 Identities = 134/153 (87%) Strand = Plus / Minus Query: 26 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 85 ||||||||||| || ||||||| ||| ||||||||||| || |||||||||| | ||||| Sbjct: 132722 cccgagtagcacggagcacgtgaaattccgtgtgaatccgcgaggaccacctcgtaaggc 132663 Query: 86 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 145 ||| |||| ||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 132662 taagtactactgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 132603 Query: 146 ccagtgggtagtgaaatagaacgtgaaaccgtg 178 | | ||| ||||||||||||| |||||||||| Sbjct: 132602 cgggaggggagtgaaatagaacatgaaaccgtg 132570 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Minus Query: 215 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 262 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 339476 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 339429 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Minus Query: 215 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 262 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 132536 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 132489 Score = 69.9 bits (35), Expect = 9e-09 Identities = 47/51 (92%) Strand = Plus / Minus Query: 536 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 586 ||||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 339158 tttcggtgcgggctgcgagagcggtaccaaatcgagatgaactctgaatac 339108 Score = 69.9 bits (35), Expect = 9e-09 Identities = 47/51 (92%) Strand = Plus / Minus Query: 536 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 586 ||||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 132218 tttcggtgcgggctgcgagagcggtaccaaatcgagatgaactctgaatac 132168
>gb|DQ312972.1| Uncultured bacterium clone 3N4D 23S ribosomal RNA gene, partial sequence Length = 723 Score = 258 bits (130), Expect = 2e-65 Identities = 193/214 (90%) Strand = Plus / Plus Query: 287 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 346 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 485 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaaccc 544 Query: 347 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 406 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 545 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 604 Query: 407 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 466 |||| |||||| | |||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 605 ctgacgttgaaaagtcagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 664 Query: 467 agctagctggttctccccgaaatgcgttgaggcg 500 ||||||||||||||||||||||| |||||||||| Sbjct: 665 agctagctggttctccccgaaatacgttgaggcg 698 Score = 176 bits (89), Expect = 5e-41 Identities = 137/153 (89%) Strand = Plus / Plus Query: 26 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 85 ||||||||||| || ||||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 232 cccgagtagcacggagcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 291 Query: 86 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 145 ||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 292 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 351 Query: 146 ccagtgggtagtgaaatagaacgtgaaaccgtg 178 | | ||| ||||||||||||| |||||||||| Sbjct: 352 cgggaggggagtgaaatagaacatgaaaccgtg 384 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 215 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 262 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 418 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 465
>gb|DQ312883.1| Uncultured bacterium clone 3K4C 23S ribosomal RNA gene, partial sequence Length = 723 Score = 258 bits (130), Expect = 2e-65 Identities = 193/214 (90%) Strand = Plus / Plus Query: 287 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 346 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 485 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaaccc 544 Query: 347 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 406 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 545 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 604 Query: 407 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 466 |||| |||||| | |||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 605 ctgacgttgaaaagtcagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 664 Query: 467 agctagctggttctccccgaaatgcgttgaggcg 500 ||||||||||||||||||||||| |||||||||| Sbjct: 665 agctagctggttctccccgaaatacgttgaggcg 698 Score = 176 bits (89), Expect = 5e-41 Identities = 137/153 (89%) Strand = Plus / Plus Query: 26 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 85 ||||||||||| || ||||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 232 cccgagtagcacggagcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 291 Query: 86 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 145 ||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 292 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 351 Query: 146 ccagtgggtagtgaaatagaacgtgaaaccgtg 178 | | ||| ||||||||||||| |||||||||| Sbjct: 352 cgggaggggagtgaaatagaacatgaaaccgtg 384 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 215 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 262 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 418 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 465
>gb|DQ312666.1| Uncultured bacterium clone 3D4G 23S ribosomal RNA gene, partial sequence Length = 806 Score = 258 bits (130), Expect = 2e-65 Identities = 193/214 (90%) Strand = Plus / Plus Query: 287 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 346 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 485 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaaccc 544 Query: 347 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 406 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 545 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 604 Query: 407 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 466 |||| |||||| | |||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 605 ctgacgttgaaaagtcagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 664 Query: 467 agctagctggttctccccgaaatgcgttgaggcg 500 ||||||||||||||||||||||| |||||||||| Sbjct: 665 agctagctggttctccccgaaatacgttgaggcg 698 Score = 176 bits (89), Expect = 5e-41 Identities = 137/153 (89%) Strand = Plus / Plus Query: 26 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 85 ||||||||||| || ||||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 232 cccgagtagcacggagcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 291 Query: 86 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 145 ||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 292 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 351 Query: 146 ccagtgggtagtgaaatagaacgtgaaaccgtg 178 | | ||| ||||||||||||| |||||||||| Sbjct: 352 cgggaggggagtgaaatagaacatgaaaccgtg 384 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 215 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 262 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 418 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 465 Score = 69.9 bits (35), Expect = 9e-09 Identities = 47/51 (92%) Strand = Plus / Plus Query: 536 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 586 ||||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 736 tttcggtgcgggctgcgagagcggtaccaaatcgagatgaactctgaatac 786
>gb|DQ312593.1| Uncultured bacterium clone 3B8B 23S ribosomal RNA gene, partial sequence Length = 723 Score = 258 bits (130), Expect = 2e-65 Identities = 193/214 (90%) Strand = Plus / Plus Query: 287 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 346 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 485 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaaccc 544 Query: 347 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 406 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 545 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 604 Query: 407 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 466 |||| |||||| | |||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 605 ctgacgttgaaaagtcagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 664 Query: 467 agctagctggttctccccgaaatgcgttgaggcg 500 ||||||||||||||||||||||| |||||||||| Sbjct: 665 agctagctggttctccccgaaatacgttgaggcg 698 Score = 176 bits (89), Expect = 5e-41 Identities = 137/153 (89%) Strand = Plus / Plus Query: 26 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 85 ||||||||||| || ||||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 232 cccgagtagcacggagcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 291 Query: 86 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 145 ||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 292 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 351 Query: 146 ccagtgggtagtgaaatagaacgtgaaaccgtg 178 | | ||| ||||||||||||| |||||||||| Sbjct: 352 cgggaggggagtgaaatagaacatgaaaccgtg 384 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 215 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 262 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 418 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 465
>gb|DQ312550.1| Uncultured bacterium clone 3B11D 23S ribosomal RNA gene, partial sequence Length = 806 Score = 258 bits (130), Expect = 2e-65 Identities = 193/214 (90%) Strand = Plus / Plus Query: 287 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 346 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 485 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaaccc 544 Query: 347 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 406 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 545 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 604 Query: 407 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 466 |||| |||||| | |||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 605 ctgacgttgaaaagtcagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 664 Query: 467 agctagctggttctccccgaaatgcgttgaggcg 500 ||||||||||||||||||||||| |||||||||| Sbjct: 665 agctagctggttctccccgaaatacgttgaggcg 698 Score = 176 bits (89), Expect = 5e-41 Identities = 137/153 (89%) Strand = Plus / Plus Query: 26 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 85 ||||||||||| || ||||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 232 cccgagtagcacggagcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 291 Query: 86 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 145 ||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 292 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 351 Query: 146 ccagtgggtagtgaaatagaacgtgaaaccgtg 178 | | ||| ||||||||||||| |||||||||| Sbjct: 352 cgggaggggagtgaaatagaacatgaaaccgtg 384 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 215 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 262 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 418 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 465 Score = 69.9 bits (35), Expect = 9e-09 Identities = 47/51 (92%) Strand = Plus / Plus Query: 536 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 586 ||||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 736 tttcggtgcgggctgcgagagcggtaccaaatcgagatgaactctgaatac 786
>gb|L43539.1|CRECPRRNL Chlamydomonas sp. (SAG 66.72) chloroplast large subunit ribosomal RNA (rrnL) gene Length = 5575 Score = 256 bits (129), Expect = 7e-65 Identities = 268/311 (86%), Gaps = 10/311 (3%) Strand = Plus / Plus Query: 285 ccggagccgtagcgaaagcgagtcttaatagggcgatt-----gtcactgcttatggacc 339 |||||||| ||||||||||||||||||||||||||||| |||||| | |||||||| Sbjct: 762 ccggagccttagcgaaagcgagtcttaatagggcgattaaagagtcacttcctatggacc 821 Query: 340 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 399 |||||| |||||||||| ||||||||||||||||||||| | | || ||| ||||||| Sbjct: 822 cgaacccgggtgatctaatcatgaccaggatgaagcttgggtaacaccaagtggaggtcc 881 Query: 400 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 459 |||||||| ||||||||| |||| |||||||||||||| ||||||| ||||| ||| ||| Sbjct: 882 gaaccgaccgatgttgaaaaatcggcggatgagttgtgattaggggagaaattccaatcg 941 Query: 460 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact---ggac 516 ||| | ||||||||||| ||||||||||||||||||||||||||| | ||||| | Sbjct: 942 aactcggagctagctggatctccccgaaatgcgttgaggcgcagc-ggtgactatgagct 1000 Query: 517 atctaggggtaaagc-actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaa 575 |||||| |||||||| ||||||||| ||||||||||| ||||||||||| ||| ||||| Sbjct: 1001 atctagaggtaaagctactgtttcgatgcgggctgcgaaagcggtaccaagtcgtggcaa 1060 Query: 576 actctgaatac 586 |||| |||||| Sbjct: 1061 actcagaatac 1071 Score = 167 bits (84), Expect = 5e-38 Identities = 136/152 (89%), Gaps = 1/152 (0%) Strand = Plus / Plus Query: 26 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 85 ||||||||||||||||||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 509 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 568 Query: 86 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 145 |||||||||||||||||||||||| | | ||||||| ||||||| ||||| |||||||| Sbjct: 569 taaatactcctgggtgaccgatagtgca-aagtaccgcgagggaatggtgataagaaccc 627 Query: 146 ccagtgggtagtgaaatagaacgtgaaaccgt 177 | ||| ||||||||||||| ||||||||| Sbjct: 628 ctgtaggggagtgaaatagaacatgaaaccgt 659 Score = 77.8 bits (39), Expect = 4e-11 Identities = 54/59 (91%) Strand = Plus / Plus Query: 214 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 272 ||||||||||||||||||||||||||||| |||||| ||||| |||||| |||||||| Sbjct: 695 ctgaccgcgtgcctgttgaagaatgagccagcgacttataggaagtggcaaggttaagg 753
>emb|X68923.1|CHCSRRNX1 Chloroplast Chlamydomonas sp. 66.72 rrnL gene, exon 1 Length = 1218 Score = 256 bits (129), Expect = 7e-65 Identities = 268/311 (86%), Gaps = 10/311 (3%) Strand = Plus / Plus Query: 285 ccggagccgtagcgaaagcgagtcttaatagggcgatt-----gtcactgcttatggacc 339 |||||||| ||||||||||||||||||||||||||||| |||||| | |||||||| Sbjct: 762 ccggagccttagcgaaagcgagtcttaatagggcgattaaagagtcacttcctatggacc 821 Query: 340 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 399 |||||| |||||||||| ||||||||||||||||||||| | | || ||| ||||||| Sbjct: 822 cgaacccgggtgatctaatcatgaccaggatgaagcttgggtaacaccaagtggaggtcc 881 Query: 400 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 459 |||||||| ||||||||| |||| |||||||||||||| ||||||| ||||| ||| ||| Sbjct: 882 gaaccgaccgatgttgaaaaatcggcggatgagttgtgattaggggagaaattccaatcg 941 Query: 460 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact---ggac 516 ||| | ||||||||||| ||||||||||||||||||||||||||| | ||||| | Sbjct: 942 aactcggagctagctggatctccccgaaatgcgttgaggcgcagc-ggtgactatgagct 1000 Query: 517 atctaggggtaaagc-actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaa 575 |||||| |||||||| ||||||||| ||||||||||| ||||||||||| ||| ||||| Sbjct: 1001 atctagaggtaaagctactgtttcgatgcgggctgcgaaagcggtaccaagtcgtggcaa 1060 Query: 576 actctgaatac 586 |||| |||||| Sbjct: 1061 actcagaatac 1071 Score = 167 bits (84), Expect = 5e-38 Identities = 136/152 (89%), Gaps = 1/152 (0%) Strand = Plus / Plus Query: 26 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 85 ||||||||||||||||||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 509 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 568 Query: 86 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 145 |||||||||||||||||||||||| | | ||||||| ||||||| ||||| |||||||| Sbjct: 569 taaatactcctgggtgaccgatagtgca-aagtaccgcgagggaatggtgataagaaccc 627 Query: 146 ccagtgggtagtgaaatagaacgtgaaaccgt 177 | ||| ||||||||||||| ||||||||| Sbjct: 628 ctgtaggggagtgaaatagaacatgaaaccgt 659 Score = 77.8 bits (39), Expect = 4e-11 Identities = 54/59 (91%) Strand = Plus / Plus Query: 214 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 272 ||||||||||||||||||||||||||||| |||||| ||||| |||||| |||||||| Sbjct: 695 ctgaccgcgtgcctgttgaagaatgagccagcgacttataggaagtggcaaggttaagg 753
>gb|DQ166037.1| Passiflora edulis 23S ribosomal RNA gene, partial sequence; chloroplast Length = 467 Score = 254 bits (128), Expect = 3e-64 Identities = 134/136 (98%) Strand = Plus / Plus Query: 2 aagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 61 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 332 aagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 391 Query: 62 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 392 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 451 Query: 122 gtgagggaaaggtgaa 137 ||||||||| |||||| Sbjct: 452 gtgagggaagggtgaa 467
>gb|AY584525.1| Plectonema terebrans strain CCAP 1463-4 23S ribosomal RNA gene, partial sequence Length = 2440 Score = 250 bits (126), Expect = 4e-63 Identities = 310/368 (84%), Gaps = 5/368 (1%) Strand = Plus / Plus Query: 220 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 279 |||||||||||||||||||||||||||||| ||||||| |||| ||||||||| | | Sbjct: 188 gcgtgcctgttgaagaatgagccggcgacttataggcactggca-ggttaaggggaataa 246 Query: 280 acccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacc 339 |||| | |||| || |||| ||||||| ||||||||| | |||| || |||| |||| Sbjct: 247 accc---gaagccaaagggaaaccgagtctgaatagggcgttagtcagtgtttatagacc 303 Query: 340 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 399 |||||| |||||||||| ||||| |||||||||||||||| ||| || ||| ||||||| Sbjct: 304 cgaacccgggtgatctaaccatgtccaggatgaagcttgggtgacaccaagtggaggtcc 363 Query: 400 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 459 |||||||| |||||| | ||||||||| |||||||||||||||||||||| ||| Sbjct: 364 gaaccgaccaccgttgaaaaggtggcggatgaggtgtggttaggggtgaaatgccaatcg 423 Query: 460 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc 519 ||||| ||||||||||||||||| ||||||| |||||||| |||| |||| ||| | Sbjct: 424 aacccggagctagctggttctcctcgaaatgtgttgaggcacagcggttgtgattacagc 483 Query: 520 t-aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaact 578 | |||||||||||||| |||||||||||||||| |||||||||||||||||| |||||| Sbjct: 484 tggggggtaaagcactgattcggtgcgggctgcgagagcggtaccaaatcgagtcaaact 543 Query: 579 ctgaatac 586 | |||||| Sbjct: 544 cagaatac 551 Score = 137 bits (69), Expect = 5e-29 Identities = 130/149 (87%), Gaps = 1/149 (0%) Strand = Plus / Plus Query: 30 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 89 ||||||| |||||||||| ||||||||||||||| | |||||||||| |||| |||| Sbjct: 2 agtagcacggggcacgtgaaatcccgtgtgaatccaccaggaccacctcttaaggttaaa 61 Query: 90 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 149 |||||||| ||||||||||| ||| ||||||| ||||||||||||||||||| |||| | Sbjct: 62 tactcctgcgtgaccgatagtgaaccagtaccgcgagggaaaggtgaaaagaa-ccccgg 120 Query: 150 tgggtagtgaaatagaacgtgaaaccgtg 178 ||| ||||||||||||| |||||||||| Sbjct: 121 aggggagtgaaatagaacatgaaaccgtg 149
>gb|AY584522.1| Lyngbya aestuarii PCC 7419 23S ribosomal RNA gene, partial sequence Length = 2435 Score = 250 bits (126), Expect = 4e-63 Identities = 189/210 (90%) Strand = Plus / Plus Query: 295 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 354 ||||||||||||||| |||||||||| |||| || || | |||||||||| |||||||| Sbjct: 260 agcgaaagcgagtctgaatagggcgaaagtcattgtttgtagacccgaacccgggtgatc 319 Query: 355 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 414 || ||||| |||||||||||||||| | |||| ||| ||||||||||||||| |||||| Sbjct: 320 taaccatgtccaggatgaagcttgggtaaaaccaagtggaggtccgaaccgaccgatgtt 379 Query: 415 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 474 ||| |||| ||||||||| |||||||||||||||||||||| |||||||| ||||||||| Sbjct: 380 gaaaaatcggcggatgaggtgtggttaggggtgaaatgccaatcgaacccggagctagct 439 Query: 475 ggttctccccgaaatgcgttgaggcgcagc 504 |||||||||||||||||||||||||||||| Sbjct: 440 ggttctccccgaaatgcgttgaggcgcagc 469 Score = 121 bits (61), Expect = 3e-24 Identities = 141/167 (84%), Gaps = 3/167 (1%) Strand = Plus / Plus Query: 81 aaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaag 140 ||||||||||||||||| ||||||||||| ||| ||||||| ||||||||||||||||| Sbjct: 53 aaggctaaatactcctgtgtgaccgatagagaaccagtaccgcgagggaaaggtgaaaag 112 Query: 141 aacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggag 200 |||||| | ||| ||||||||||||| ||||||||| |||| ||||||||||||| Sbjct: 113 aaccccgggaggggagtgaaatagaacctgaaaccgtt---agcttacaagcagtgggag 169 Query: 201 gggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcga 247 | | | |||||||||||||||||||||| |||||||||||| Sbjct: 170 gacgattaaacgtctgaccgcgtgcctgttgaagcatgagccggcga 216 Score = 113 bits (57), Expect = 7e-22 Identities = 63/65 (96%) Strand = Plus / Plus Query: 522 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 581 ||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| Sbjct: 488 ggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgagacaaactctg 547 Query: 582 aatac 586 ||||| Sbjct: 548 aatac 552
>gb|AY584518.1| Oscillatoria sp. strain PCC 6506 23S ribosomal RNA gene, partial sequence Length = 2440 Score = 250 bits (126), Expect = 4e-63 Identities = 189/210 (90%) Strand = Plus / Plus Query: 295 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 354 ||||||||||||||| || |||||| | ||||||| |||| |||||||||| |||||||| Sbjct: 260 agcgaaagcgagtctgaaaagggcgttcgtcactgtttatagacccgaacccgggtgatc 319 Query: 355 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 414 || ||||| |||||||||||||||| | | || ||| |||||||||||||||||||||| Sbjct: 320 taaccatgtccaggatgaagcttgggtaacaccaagtggaggtccgaaccgactgatgtt 379 Query: 415 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 474 ||| |||||||||||||| |||||||||||||||||||||| |||||||| ||||||||| Sbjct: 380 gaaaaatcagcggatgaggtgtggttaggggtgaaatgccaatcgaacccggagctagct 439 Query: 475 ggttctccccgaaatgcgttgaggcgcagc 504 |||||||||||||||| |||||||| |||| Sbjct: 440 ggttctccccgaaatgtgttgaggcacagc 469 Score = 145 bits (73), Expect = 2e-31 Identities = 130/149 (87%) Strand = Plus / Plus Query: 29 gagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaa 88 |||||||| ||||| |||| ||||||||||||||| || ||||||| || | |||||||| Sbjct: 1 gagtagcacggggcccgtgaaatcccgtgtgaatctgcgaggaccatctcgtaaggctaa 60 Query: 89 atactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccca 148 ||||| ||| ||||||||||| ||| ||||||| ||||||||||||||||||||||| | Sbjct: 61 atactactgtgtgaccgatagtgaaccagtaccgcgagggaaaggtgaaaagaaccccga 120 Query: 149 gtgggtagtgaaatagaacgtgaaaccgt 177 ||| ||||||||||||| ||||||||| Sbjct: 121 aaggggagtgaaatagaacctgaaaccgt 149 Score = 113 bits (57), Expect = 7e-22 Identities = 63/65 (96%) Strand = Plus / Plus Query: 522 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 581 ||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| Sbjct: 488 ggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgagacaaactctg 547 Query: 582 aatac 586 ||||| Sbjct: 548 aatac 552 Score = 63.9 bits (32), Expect = 5e-07 Identities = 44/48 (91%) Strand = Plus / Plus Query: 215 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 262 |||||| ||||||||||||| |||||||||||| | |||||||||||| Sbjct: 184 tgaccgtgtgcctgttgaagcatgagccggcgagttataggcagtggc 231
>gb|DQ313038.1| Uncultured bacterium clone 3P8C 23S ribosomal RNA gene, partial sequence Length = 793 Score = 250 bits (126), Expect = 4e-63 Identities = 192/214 (89%) Strand = Plus / Plus Query: 287 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 346 |||||| |||||||||||||||| ||||||||| |||||| | |||| |||||||||| Sbjct: 472 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtatttatagacccgaaccc 531 Query: 347 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 406 |||||||||| ||||| |||||||||||||||| ||| || ||| ||||||||||| || Sbjct: 532 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaacgga 591 Query: 407 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 466 ||||||||||| ||||||| |||||| |||||||||||||||||||||| |||||||| | Sbjct: 592 ctgatgttgaaaaatcagccgatgagctgtggttaggggtgaaatgccaatcgaacccgg 651 Query: 467 agctagctggttctccccgaaatgcgttgaggcg 500 ||||||||||||||||||||||| |||||||||| Sbjct: 652 agctagctggttctccccgaaatacgttgaggcg 685 Score = 176 bits (89), Expect = 5e-41 Identities = 137/153 (89%) Strand = Plus / Plus Query: 26 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 85 ||||||||||| || ||||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 219 cccgagtagcacggagcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 278 Query: 86 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 145 ||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 279 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 338 Query: 146 ccagtgggtagtgaaatagaacgtgaaaccgtg 178 | | ||| ||||||||||||| |||||||||| Sbjct: 339 cgggaggggagtgaaatagaacatgaaaccgtg 371 Score = 69.9 bits (35), Expect = 9e-09 Identities = 47/51 (92%) Strand = Plus / Plus Query: 536 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 586 ||||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 723 tttcggtgcgggctgcgagagcggtaccaaatcgagatgaactctgaatac 773 Score = 65.9 bits (33), Expect = 1e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 215 tgaccgcgtgcctgttgaagaatgagccggcgactcatagg 255 |||||| |||||||||||||||||||||||||||| ||||| Sbjct: 405 tgaccgtgtgcctgttgaagaatgagccggcgacttatagg 445
>gb|DQ313003.1| Uncultured bacterium clone 3O5G 23S ribosomal RNA gene, partial sequence Length = 793 Score = 250 bits (126), Expect = 4e-63 Identities = 192/214 (89%) Strand = Plus / Plus Query: 287 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 346 |||||| |||||||||||||||| ||||||||| |||||| | |||| |||||||||| Sbjct: 472 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtatttatagacccgaaccc 531 Query: 347 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 406 |||||||||| ||||| |||||||||||||||| ||| || ||| ||||||||||| || Sbjct: 532 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaacgga 591 Query: 407 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 466 ||||||||||| ||||||| |||||| |||||||||||||||||||||| |||||||| | Sbjct: 592 ctgatgttgaaaaatcagccgatgagctgtggttaggggtgaaatgccaatcgaacccgg 651 Query: 467 agctagctggttctccccgaaatgcgttgaggcg 500 ||||||||||||||||||||||| |||||||||| Sbjct: 652 agctagctggttctccccgaaatacgttgaggcg 685 Score = 176 bits (89), Expect = 5e-41 Identities = 137/153 (89%) Strand = Plus / Plus Query: 26 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 85 ||||||||||| || ||||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 219 cccgagtagcacggagcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 278 Query: 86 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 145 ||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 279 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 338 Query: 146 ccagtgggtagtgaaatagaacgtgaaaccgtg 178 | | ||| ||||||||||||| |||||||||| Sbjct: 339 cgggaggggagtgaaatagaacatgaaaccgtg 371 Score = 69.9 bits (35), Expect = 9e-09 Identities = 47/51 (92%) Strand = Plus / Plus Query: 536 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 586 ||||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 723 tttcggtgcgggctgcgagagcggtaccaaatcgagatgaactctgaatac 773 Score = 65.9 bits (33), Expect = 1e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 215 tgaccgcgtgcctgttgaagaatgagccggcgactcatagg 255 |||||| |||||||||||||||||||||||||||| ||||| Sbjct: 405 tgaccgtgtgcctgttgaagaatgagccggcgacttatagg 445
>gb|DQ312801.1| Uncultured bacterium clone 3H5F 23S ribosomal RNA gene, partial sequence Length = 793 Score = 250 bits (126), Expect = 4e-63 Identities = 192/214 (89%) Strand = Plus / Plus Query: 287 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 346 |||||| |||||||||||||||| ||||||||| |||||| | |||| |||||||||| Sbjct: 472 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtatttatagacccgaaccc 531 Query: 347 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 406 |||||||||| ||||| |||||||||||||||| ||| || ||| ||||||||||| || Sbjct: 532 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaacgga 591 Query: 407 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 466 ||||||||||| ||||||| |||||| |||||||||||||||||||||| |||||||| | Sbjct: 592 ctgatgttgaaaaatcagccgatgagctgtggttaggggtgaaatgccaatcgaacccgg 651 Query: 467 agctagctggttctccccgaaatgcgttgaggcg 500 ||||||||||||||||||||||| |||||||||| Sbjct: 652 agctagctggttctccccgaaatacgttgaggcg 685 Score = 176 bits (89), Expect = 5e-41 Identities = 137/153 (89%) Strand = Plus / Plus Query: 26 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 85 ||||||||||| || ||||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 219 cccgagtagcacggagcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 278 Query: 86 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 145 ||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 279 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 338 Query: 146 ccagtgggtagtgaaatagaacgtgaaaccgtg 178 | | ||| ||||||||||||| |||||||||| Sbjct: 339 cgggaggggagtgaaatagaacatgaaaccgtg 371 Score = 69.9 bits (35), Expect = 9e-09 Identities = 47/51 (92%) Strand = Plus / Plus Query: 536 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 586 ||||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 723 tttcggtgcgggctgcgagagcggtaccaaatcgagatgaactctgaatac 773 Score = 65.9 bits (33), Expect = 1e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 215 tgaccgcgtgcctgttgaagaatgagccggcgactcatagg 255 |||||| |||||||||||||||||||||||||||| ||||| Sbjct: 405 tgaccgtgtgcctgttgaagaatgagccggcgacttatagg 445
>gb|AF041468.1| Guillardia theta complete plastid genome Length = 121524 Score = 250 bits (126), Expect = 4e-63 Identities = 308/364 (84%), Gaps = 6/364 (1%) Strand = Plus / Minus Query: 225 cctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaaccca 284 ||||||||||||||||||||||||| |||| |||||| |||||||| | ||| | Sbjct: 39855 cctgttgaagaatgagccggcgacttgtaggtagtggca-ggttaaggta---gaaaata 39800 Query: 285 ccggagccgtagcgaaagcgagtcttaatagggcgatt-gtcactgcttatggacccgaa 343 |||||||| || ||||||||| ||||||| ||| || ||||||| ||| |||||||| Sbjct: 39799 ccggagccagagtgaaagcgagctttaatagagcgttttgtcactgtttacagacccgaa 39740 Query: 344 cctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaac 403 || || ||||||| ||||| |||| |||||||| | | | |||||| ||||| ||||| Sbjct: 39739 cccggatgatctaaccatggccagcgtgaagcttaggtaacactaagtggaggtgcgaac 39680 Query: 404 cgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacc 463 |||||||||||||| |||||||||||||| |||||||||||||||||||||| ||||| | Sbjct: 39679 cgactgatgttgaaaaatcagcggatgagctgtggttaggggtgaaatgccaatcgaatc 39620 Query: 464 cagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc-tag 522 | ||||||||||||||||||||||||||||| ||||||||| |||| || | ||| Sbjct: 39619 cggagctagctggttctccccgaaatgcgtttaggcgcagcgattgatgctccaacttag 39560 Query: 523 gggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctga 582 ||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||| Sbjct: 39559 gggtaaagcactgtttcggtgcgggctgctaacgcggtaccaaatcgatgcaaactctga 39500 Query: 583 atac 586 |||| Sbjct: 39499 atac 39496 Score = 250 bits (126), Expect = 4e-63 Identities = 308/364 (84%), Gaps = 6/364 (1%) Strand = Plus / Plus Query: 225 cctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaaccca 284 ||||||||||||||||||||||||| |||| |||||| |||||||| | ||| | Sbjct: 19545 cctgttgaagaatgagccggcgacttgtaggtagtggca-ggttaaggta---gaaaata 19600 Query: 285 ccggagccgtagcgaaagcgagtcttaatagggcgatt-gtcactgcttatggacccgaa 343 |||||||| || ||||||||| ||||||| ||| || ||||||| ||| |||||||| Sbjct: 19601 ccggagccagagtgaaagcgagctttaatagagcgttttgtcactgtttacagacccgaa 19660 Query: 344 cctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaac 403 || || ||||||| ||||| |||| |||||||| | | | |||||| ||||| ||||| Sbjct: 19661 cccggatgatctaaccatggccagcgtgaagcttaggtaacactaagtggaggtgcgaac 19720 Query: 404 cgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacc 463 |||||||||||||| |||||||||||||| |||||||||||||||||||||| ||||| | Sbjct: 19721 cgactgatgttgaaaaatcagcggatgagctgtggttaggggtgaaatgccaatcgaatc 19780 Query: 464 cagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc-tag 522 | ||||||||||||||||||||||||||||| ||||||||| |||| || | ||| Sbjct: 19781 cggagctagctggttctccccgaaatgcgtttaggcgcagcgattgatgctccaacttag 19840 Query: 523 gggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctga 582 ||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||| Sbjct: 19841 gggtaaagcactgtttcggtgcgggctgctaacgcggtaccaaatcgatgcaaactctga 19900 Query: 583 atac 586 |||| Sbjct: 19901 atac 19904 Score = 137 bits (69), Expect = 5e-29 Identities = 108/121 (89%) Strand = Plus / Minus Query: 26 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 85 ||||||||||||||| |||||| || |||||||||||| || |||||||||| | ||||| Sbjct: 40051 cccgagtagcatgggacacgtgaaaccccgtgtgaatctgcgaggaccacctcgtaaggc 39992 Query: 86 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 145 |||||| ||||| |||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 39991 taaatattcctgaatgaccgatagcgaacaagtaccgcgagggaaaggtgaaaagaaccc 39932 Query: 146 c 146 | Sbjct: 39931 c 39931 Score = 137 bits (69), Expect = 5e-29 Identities = 108/121 (89%) Strand = Plus / Plus Query: 26 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 85 ||||||||||||||| |||||| || |||||||||||| || |||||||||| | ||||| Sbjct: 19349 cccgagtagcatgggacacgtgaaaccccgtgtgaatctgcgaggaccacctcgtaaggc 19408 Query: 86 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 145 |||||| ||||| |||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 19409 taaatattcctgaatgaccgatagcgaacaagtaccgcgagggaaaggtgaaaagaaccc 19468 Query: 146 c 146 | Sbjct: 19469 c 19469
>emb|Z15151.1|CHCGRRNL Chloroplast Chlamydomonas gelatinosa rrnL gene Length = 2904 Score = 250 bits (126), Expect = 4e-63 Identities = 264/304 (86%), Gaps = 7/304 (2%) Strand = Plus / Plus Query: 289 agccgtagcgaaagcgagtcttaatagggcgatt--gtcactgcttatggacccgaacct 346 |||| |||||||||||||||| ||||||||| | |||||| |||||||||||||||| Sbjct: 656 agccatagcgaaagcgagtctgaatagggcgtcttcgtcacttcttatggacccgaaccc 715 Query: 347 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 406 |||||||||| |||||||||||||||||||||| | || | ||| |||||||||||||| Sbjct: 716 gggtgatctaaccatgaccaggatgaagcttgggtaaatccaagtggaggtccgaaccga 775 Query: 407 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 466 | ||||||||| |||| |||||||||||||||||||||| ||||| ||| |||||| | | Sbjct: 776 ccgatgttgaaaaatcggcggatgagttgtggttaggggagaaattccaatcgaactcgg 835 Query: 467 agctagctggttctccccgaaatgcgttgaggcgcagcagt--tgactggac-atctagg 523 |||||||||| ||||||||||||||||||||||||||| || || || || |||| || Sbjct: 836 agctagctggatctccccgaaatgcgttgaggcgcagcggtaacga-tgaactatcttgg 894 Query: 524 ggtaaagc-actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctga 582 |||||||| ||||||||| ||||||||||| || |||||||| ||| ||||||||| || Sbjct: 895 ggtaaagctactgtttcgatgcgggctgcgaaagtggtaccaagtcgtggcaaactcaga 954 Query: 583 atac 586 |||| Sbjct: 955 atac 958 Score = 190 bits (96), Expect = 4e-45 Identities = 138/152 (90%) Strand = Plus / Plus Query: 26 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 85 ||||||||||||||| |||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 402 cccgagtagcatgggacacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 461 Query: 86 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 145 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 462 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 521 Query: 146 ccagtgggtagtgaaatagaacgtgaaaccgt 177 | |||| ||||||||||||| ||||||||| Sbjct: 522 ctgttggggagtgaaatagaacatgaaaccgt 553 Score = 85.7 bits (43), Expect = 1e-13 Identities = 55/59 (93%) Strand = Plus / Plus Query: 215 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggg 273 |||| |||||||||||||||||||||||||||||| ||||| ||||||| ||||||||| Sbjct: 586 tgactgcgtgcctgttgaagaatgagccggcgacttataggaagtggctaggttaaggg 644
>gb|L42854.1|SFCCPRGOL Scourfieldia sp. M561 large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2568 Score = 248 bits (125), Expect = 2e-62 Identities = 197/221 (89%) Strand = Plus / Plus Query: 284 accggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaa 343 ||||||||| ||||||||| ||||| ||||||||| |||| ||||||||||||||||| Sbjct: 622 accggagccagagcgaaagcaagtctgaatagggcgtatgtccctgcttatggacccgaa 681 Query: 344 cctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaac 403 || |||||||||| |||||||||||||||||||| | ||| ||| ||||||||||| Sbjct: 682 cccgggtgatctaaccatgaccaggatgaagcttcagtaaaatgaagtggaggtccgaac 741 Query: 404 cgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacc 463 |||| ||||||||| |||| || ||||||||||||||||||||||||||||| |||||| Sbjct: 742 cgaccgatgttgaaaaatcggctgatgagttgtggttaggggtgaaatgccaatcgaact 801 Query: 464 cagagctagctggttctccccgaaatgcgttgaggcgcagc 504 | ||||||||||||||||||||||||||||||||||||||| Sbjct: 802 cggagctagctggttctccccgaaatgcgttgaggcgcagc 842 Score = 182 bits (92), Expect = 9e-43 Identities = 137/152 (90%) Strand = Plus / Plus Query: 26 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 85 |||||||||||||||||||||| |||||||||||||||| | |||||||||| | ||| | Sbjct: 371 cccgagtagcatggggcacgtgaaatcccgtgtgaatcaacgaggaccacctcgtaagac 430 Query: 86 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 145 |||||||||||| ||||||||||| ||| |||||||||||||||||||||||||||||| Sbjct: 431 taaatactcctgagtgaccgatagtgaaacagtaccgtgagggaaaggtgaaaagaaccc 490 Query: 146 ccagtgggtagtgaaatagaacgtgaaaccgt 177 ||| ||| ||||||||||| | ||||||||| Sbjct: 491 ccataggggagtgaaatagatcatgaaaccgt 522 Score = 111 bits (56), Expect = 3e-21 Identities = 59/60 (98%) Strand = Plus / Plus Query: 213 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 272 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 556 tctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcttggttaagg 615 Score = 91.7 bits (46), Expect = 2e-15 Identities = 64/70 (91%) Strand = Plus / Plus Query: 517 atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaa 576 |||||||||||||||||||| ||||||||||||||| ||||||||||||||| |||| Sbjct: 859 atctaggggtaaagcactgtatcggtgcgggctgcgaaagcggtaccaaatcgtaacaaa 918 Query: 577 ctctgaatac 586 |||||||||| Sbjct: 919 ctctgaatac 928
>gb|AY584524.1| Microcoleus sp. strain PCC 8701 23S ribosomal RNA gene, partial sequence Length = 2451 Score = 244 bits (123), Expect = 3e-61 Identities = 192/215 (89%) Strand = Plus / Plus Query: 295 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 354 |||||||||||||| |||||||||||| ||||| || | |||||||||| |||||||| Sbjct: 262 agcgaaagcgagtcctaatagggcgatcgtcacgctttgtagacccgaacccgggtgatc 321 Query: 355 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 414 || ||||| |||||||||||||||| | |||| ||| ||||||||||||||| |||||| Sbjct: 322 taaccatgtccaggatgaagcttgggtaaaaccaagtggaggtccgaaccgaccgatgtt 381 Query: 415 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 474 ||| |||| ||||||||| |||||||||||||||||||||| |||||||| ||||||||| Sbjct: 382 gaaaaatcggcggatgaggtgtggttaggggtgaaatgccaatcgaacccggagctagct 441 Query: 475 ggttctccccgaaatgcgttgaggcgcagcagttg 509 |||||||||||||||| ||||||||||||| |||| Sbjct: 442 ggttctccccgaaatgtgttgaggcgcagcggttg 476 Score = 176 bits (89), Expect = 5e-41 Identities = 134/149 (89%) Strand = Plus / Plus Query: 29 gagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaa 88 ||||||||||||||| ||| |||||| ||||||||||| || |||| || | |||||||| Sbjct: 1 gagtagcatggggcaggtgaaatcccatgtgaatcagcgagaaccatctcgtaaggctaa 60 Query: 89 atactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccca 148 ||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||| | Sbjct: 61 atactcctgtgtgaccgatagcgaagtagtaccgcgagggaaaggtgaaaagaaccccga 120 Query: 149 gtgggtagtgaaatagaacgtgaaaccgt 177 ||| ||||||||||||| ||||||||| Sbjct: 121 aaggggagtgaaatagaacatgaaaccgt 149 Score = 97.6 bits (49), Expect = 4e-17 Identities = 61/65 (93%) Strand = Plus / Plus Query: 522 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 581 |||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||| Sbjct: 490 ggggtaaagcactgtttcggtgcgggctgcctcagcggtaccaaatcgagacaaactctg 549 Query: 582 aatac 586 ||||| Sbjct: 550 aatac 554 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Plus Query: 213 tctgaccgcgtgcctgttgaagaatgagccggcga 247 |||||||| |||||||||||||||||||||||||| Sbjct: 182 tctgaccgtgtgcctgttgaagaatgagccggcga 216
>gb|AY584513.1| Nodularia harveyana strain CCAP 1452/1 23S ribosomal RNA gene, partial sequence Length = 2387 Score = 244 bits (123), Expect = 3e-61 Identities = 262/305 (85%), Gaps = 5/305 (1%) Strand = Plus / Plus Query: 285 ccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaac 344 |||||||| || |||| ||||||| || ||||||| ||| || |||| ||||||||| Sbjct: 249 ccggagccaaagggaaaccgagtctgaaaagggcgaaaatcagtgtttatagacccgaac 308 Query: 345 ctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaacc 404 | ||||||||| ||||| |||||||||||||||| | | || ||| |||||||||||| Sbjct: 309 cctggtgatctaaccatggccaggatgaagcttgggtaacaccaagtggaggtccgaacc 368 Query: 405 gactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccc 464 ||||||||||||| |||||||||||||| |||||||||||||||||||||| ||||||| Sbjct: 369 gactgatgttgaaaaatcagcggatgagctgtggttaggggtgaaatgccaatcgaacca 428 Query: 465 agagctagctggttctccccgaaatgcgttgaggcgcagcagt--tgactggacatctag 522 ||||||||||||||||||||||||| ||| ||||||||| || ||| | | |||| | Sbjct: 429 ggagctagctggttctccccgaaatgtgtttaggcgcagcggtaatgatt--aaatctgg 486 Query: 523 -gggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 581 |||||||||||||||||||||||||||| | || ||||||||||||||| ||||||| | Sbjct: 487 ggggtaaagcactgtttcggtgcgggctgggagaccggtaccaaatcgagacaaactcag 546 Query: 582 aatac 586 ||||| Sbjct: 547 aatac 551 Score = 153 bits (77), Expect = 8e-34 Identities = 131/149 (87%) Strand = Plus / Plus Query: 29 gagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaa 88 ||||||||||||||||| |||||||| ||||||||||| ||||||| || | |||||||| Sbjct: 1 gagtagcatggggcacgaggaatcccatgtgaatcagcgaggaccatctcgtaaggctaa 60 Query: 89 atactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccca 148 ||||| ||| ||||||||||| ||| ||||||| ||||||||||||||||||||||| Sbjct: 61 atactactgtgtgaccgatagtgaaccagtaccgcgagggaaaggtgaaaagaaccccgg 120 Query: 149 gtgggtagtgaaatagaacgtgaaaccgt 177 ||| ||||||||||||| ||||||||| Sbjct: 121 aaggggagtgaaatagaacatgaaaccgt 149 Score = 77.8 bits (39), Expect = 4e-11 Identities = 42/43 (97%) Strand = Plus / Plus Query: 215 tgaccgcgtgcctgttgaagaatgagccggcgactcataggca 257 ||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 184 tgaccgcgtgcctgttgaagaatgagccggcgacttataggca 226
>gb|AF393596.1| Entransia fimbriata large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2840 Score = 244 bits (123), Expect = 3e-61 Identities = 179/197 (90%), Gaps = 3/197 (1%) Strand = Plus / Plus Query: 393 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 452 |||| |||||||||| ||||||||| |||| ||||||||||||||||||||||||||||| Sbjct: 736 gaggcccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttaggggtgaaatg 795 Query: 453 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact 512 ||| |||||| | ||||||||||||||||||||||||||||||||||||||| || | | Sbjct: 796 ccaatcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggtgggtt 855 Query: 513 ---ggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcg 569 || |||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 856 tagggctatctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcg 915 Query: 570 aggcaaactctgaatac 586 || |||||||||||||| Sbjct: 916 agacaaactctgaatac 932 Score = 202 bits (102), Expect = 9e-49 Identities = 117/122 (95%) Strand = Plus / Plus Query: 25 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 84 ||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||| Sbjct: 373 acccgagtagcatggggcacgtgaaatcccgtgtgaatccgcaaggaccaccttgcaagg 432 Query: 85 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 144 |||||||||||| | |||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 433 ctaaatactcctagatgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacc 492 Query: 145 cc 146 || Sbjct: 493 cc 494 Score = 105 bits (53), Expect = 2e-19 Identities = 56/57 (98%) Strand = Plus / Plus Query: 216 gaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 272 |||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 562 gaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcttggttaagg 618 Score = 63.9 bits (32), Expect = 5e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 322 tgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagctt 377 |||||||| ||||||||||||| | | |||||||| ||||||||||| |||||||| Sbjct: 664 tgtcactgtttatggacccgaatccgagtgatctaaccatgaccagggtgaagctt 719
>gb|CP000111.1| Prochlorococcus marinus str. MIT 9312, complete genome Length = 1709204 Score = 242 bits (122), Expect = 1e-60 Identities = 185/206 (89%) Strand = Plus / Plus Query: 295 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 354 ||||||||||||||||||||||||| |||||| || |||| |||||||||| ||||||| Sbjct: 320233 agcgaaagcgagtcttaatagggcgtttgtcagtgtttatagacccgaaccctggtgatc 320292 Query: 355 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 414 || ||||| |||||||||||||||| ||| || ||| |||||||||||||||||| ||| Sbjct: 320293 taaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccgactgaagtt 320352 Query: 415 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 474 ||| | |||||||||||| |||||||||||||||||||||| ||||||| ||||||||| Sbjct: 320353 gaaaattcagcggatgagctgtggttaggggtgaaatgccaatcgaaccaggagctagct 320412 Query: 475 ggttctccccgaaatgcgttgaggcg 500 ||||||||||||||| |||||||||| Sbjct: 320413 ggttctccccgaaatacgttgaggcg 320438 Score = 153 bits (77), Expect = 8e-34 Identities = 134/153 (87%) Strand = Plus / Plus Query: 26 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 85 ||||||||||| || ||||||||||| ||||||||||| || |||||||||| | ||||| Sbjct: 319972 cccgagtagcacggagcacgtggaattccgtgtgaatctgcgaggaccacctcgtaaggc 320031 Query: 86 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 145 ||| |||| ||| ||||||||||| ||| ||||||| |||||||||||||||||||||| Sbjct: 320032 taagtactactgtgtgaccgatagtgaaacagtaccgcgagggaaaggtgaaaagaaccc 320091 Query: 146 ccagtgggtagtgaaatagaacgtgaaaccgtg 178 | | ||| ||||||||||||| |||||||||| Sbjct: 320092 cgggaggggagtgaaatagaacatgaaaccgtg 320124 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 215 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 262 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 320158 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 320205 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 536 tttcggtgcgggctgcgcgagcggtaccaaatcga 570 ||||||||||||||||| |||||||||||||||| Sbjct: 320476 tttcggtgcgggctgcgaaagcggtaccaaatcga 320510
>gb|CP000097.1| Synechococcus sp. CC9902, complete genome Length = 2234828 Score = 242 bits (122), Expect = 1e-60 Identities = 191/214 (89%) Strand = Plus / Minus Query: 287 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 346 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 1775855 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaaccc 1775796 Query: 347 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 406 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 1775795 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 1775736 Query: 407 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 466 ||| |||||| | ||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 1775735 ctggcgttgaaaagccagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 1775676 Query: 467 agctagctggttctccccgaaatgcgttgaggcg 500 ||||||||||||||||||||||| |||||||||| Sbjct: 1775675 agctagctggttctccccgaaatacgttgaggcg 1775642 Score = 242 bits (122), Expect = 1e-60 Identities = 191/214 (89%) Strand = Plus / Plus Query: 287 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 346 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 376214 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaaccc 376273 Query: 347 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 406 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 376274 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 376333 Query: 407 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 466 ||| |||||| | ||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 376334 ctggcgttgaaaagccagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 376393 Query: 467 agctagctggttctccccgaaatgcgttgaggcg 500 ||||||||||||||||||||||| |||||||||| Sbjct: 376394 agctagctggttctccccgaaatacgttgaggcg 376427 Score = 153 bits (77), Expect = 8e-34 Identities = 134/153 (87%) Strand = Plus / Minus Query: 26 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 85 ||||||||||| || ||||||| ||| ||||||||||| || |||||||||| | ||||| Sbjct: 1776108 cccgagtagcacggagcacgtgaaattccgtgtgaatccgcgaggaccacctcgtaaggc 1776049 Query: 86 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 145 ||| |||| ||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 1776048 taagtactactgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 1775989 Query: 146 ccagtgggtagtgaaatagaacgtgaaaccgtg 178 | | ||| ||||||||||||| |||||||||| Sbjct: 1775988 cgggaggggagtgaaatagaacatgaaaccgtg 1775956 Score = 153 bits (77), Expect = 8e-34 Identities = 134/153 (87%) Strand = Plus / Plus Query: 26 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 85 ||||||||||| || ||||||| ||| ||||||||||| || |||||||||| | ||||| Sbjct: 375961 cccgagtagcacggagcacgtgaaattccgtgtgaatccgcgaggaccacctcgtaaggc 376020 Query: 86 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 145 ||| |||| ||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 376021 taagtactactgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 376080 Query: 146 ccagtgggtagtgaaatagaacgtgaaaccgtg 178 | | ||| ||||||||||||| |||||||||| Sbjct: 376081 cgggaggggagtgaaatagaacatgaaaccgtg 376113 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Minus Query: 215 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 262 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 1775922 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 1775875 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 215 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 262 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 376147 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 376194 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Minus Query: 536 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 586 ||||||| ||||||||| |||||||||||||||||| |||||||||||| Sbjct: 1775604 tttcggtacgggctgcgagagcggtaccaaatcgagatgaactctgaatac 1775554 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Plus Query: 536 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 586 ||||||| ||||||||| |||||||||||||||||| |||||||||||| Sbjct: 376465 tttcggtacgggctgcgagagcggtaccaaatcgagatgaactctgaatac 376515
>gb|AY033310.1| Uncultured Prochlorococcus sp. MB11F02 16S ribosomal RNA gene, partial sequence; tRNA-Ile and tRNA-Ala genes, complete sequence; and 23S ribosomal RNA gene, partial sequence Length = 3916 Score = 242 bits (122), Expect = 1e-60 Identities = 185/206 (89%) Strand = Plus / Plus Query: 295 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 354 ||||||||||||||||||||||||| |||||| || |||| |||||||||| ||||||| Sbjct: 2656 agcgaaagcgagtcttaatagggcgtttgtcagtgtttatagacccgaaccctggtgatc 2715 Query: 355 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 414 || ||||| |||||||||||||||| ||| || ||| |||||||||||||||||| ||| Sbjct: 2716 taaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccgactgaagtt 2775 Query: 415 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 474 ||| | |||||||||||| |||||||||||||||||||||| ||||||| ||||||||| Sbjct: 2776 gaaaattcagcggatgagctgtggttaggggtgaaatgccaatcgaaccaggagctagct 2835 Query: 475 ggttctccccgaaatgcgttgaggcg 500 ||||||||||||||| |||||||||| Sbjct: 2836 ggttctccccgaaatacgttgaggcg 2861 Score = 139 bits (70), Expect = 1e-29 Identities = 134/154 (87%), Gaps = 1/154 (0%) Strand = Plus / Plus Query: 26 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 85 ||||||||||| || ||||||||||| ||||||||||| || |||||||||| | ||||| Sbjct: 2394 cccgagtagcacggagcacgtggaattccgtgtgaatctgcgaggaccacctcgtaaggc 2453 Query: 86 taaatac-tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 144 ||| ||| | ||| ||||||||||| ||| ||||||| ||||||||||||||||||||| Sbjct: 2454 taagtacctactgtgtgaccgatagtgaaacagtaccgcgagggaaaggtgaaaagaacc 2513 Query: 145 cccagtgggtagtgaaatagaacgtgaaaccgtg 178 || | ||| ||||||||||||| |||||||||| Sbjct: 2514 ccgggaggggagtgaaatagaacatgaaaccgtg 2547 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 215 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 262 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 2581 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 2628 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 536 tttcggtgcgggctgcgcgagcggtaccaaatcga 570 ||||||||||||||||| |||||||||||||||| Sbjct: 2899 tttcggtgcgggctgcgaaagcggtaccaaatcga 2933
>gb|AY033307.1| Uncultured Prochlorococcus sp. MB11E08 16S ribosomal RNA gene, partial sequence; tRNA-Ile and tRNA-Ala genes, complete sequence; and 23S ribosomal RNA gene, partial sequence Length = 3917 Score = 242 bits (122), Expect = 1e-60 Identities = 185/206 (89%) Strand = Plus / Plus Query: 295 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 354 ||||||||||||||||||||||||| |||||| || |||| |||||||||| ||||||| Sbjct: 2657 agcgaaagcgagtcttaatagggcgtttgtcagtgtttatagacccgaaccctggtgatc 2716 Query: 355 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 414 || ||||| |||||||||||||||| ||| || ||| |||||||||||||||||| ||| Sbjct: 2717 taaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccgactgaagtt 2776 Query: 415 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 474 ||| | |||||||||||| |||||||||||||||||||||| ||||||| ||||||||| Sbjct: 2777 gaaaattcagcggatgagctgtggttaggggtgaaatgccaatcgaaccaggagctagct 2836 Query: 475 ggttctccccgaaatgcgttgaggcg 500 ||||||||||||||| |||||||||| Sbjct: 2837 ggttctccccgaaatacgttgaggcg 2862 Score = 153 bits (77), Expect = 8e-34 Identities = 134/153 (87%) Strand = Plus / Plus Query: 26 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 85 ||||||||||| || ||||||||||| ||||||||||| || |||||||||| | ||||| Sbjct: 2396 cccgagtagcacggagcacgtggaattccgtgtgaatctgcgaggaccacctcgtaaggc 2455 Query: 86 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 145 ||| |||| ||| ||||||||||| ||| ||||||| |||||||||||||||||||||| Sbjct: 2456 taagtactactgtgtgaccgatagtgaaacagtaccgcgagggaaaggtgaaaagaaccc 2515 Query: 146 ccagtgggtagtgaaatagaacgtgaaaccgtg 178 | | ||| ||||||||||||| |||||||||| Sbjct: 2516 cgggaggggagtgaaatagaacatgaaaccgtg 2548 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 215 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 262 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 2582 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 2629 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 536 tttcggtgcgggctgcgcgagcggtaccaaatcga 570 ||||||||||||||||| |||||||||||||||| Sbjct: 2900 tttcggtgcgggctgcgaaagcggtaccaaatcga 2934
>gb|AY033308.1| Uncultured Synechococcus sp. MB11E09 16S ribosomal RNA gene, partial sequence; tRNA-Ile and tRNA-Ala genes, complete sequence; and 23S ribosomal RNA gene, partial sequence Length = 4137 Score = 242 bits (122), Expect = 1e-60 Identities = 191/214 (89%) Strand = Plus / Plus Query: 287 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 346 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 2876 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaaccc 2935 Query: 347 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 406 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 2936 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 2995 Query: 407 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 466 ||| |||||| | ||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 2996 ctggcgttgaaaagccagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 3055 Query: 467 agctagctggttctccccgaaatgcgttgaggcg 500 ||||||||||||||||||||||| |||||||||| Sbjct: 3056 agctagctggttctccccgaaatacgttgaggcg 3089 Score = 153 bits (77), Expect = 8e-34 Identities = 134/153 (87%) Strand = Plus / Plus Query: 26 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 85 ||||||||||| || ||||||| ||| ||||||||||| || |||||||||| | ||||| Sbjct: 2623 cccgagtagcacggagcacgtgaaattccgtgtgaatccgcgaggaccacctcgtaaggc 2682 Query: 86 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 145 ||| |||| ||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 2683 taagtactactgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 2742 Query: 146 ccagtgggtagtgaaatagaacgtgaaaccgtg 178 | | ||| ||||||||||||| |||||||||| Sbjct: 2743 cgggaggggagtgaaatagaacatgaaaccgtg 2775 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 215 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 262 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 2809 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 2856 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Plus Query: 536 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 586 ||||||| ||||||||| |||||||||||||||||| |||||||||||| Sbjct: 3127 tttcggtacgggctgcgagagcggtaccaaatcgagatgaactctgaatac 3177
>gb|AY584523.1| Microcystis sp. strain PCC 7820 23S ribosomal RNA gene, partial sequence Length = 2435 Score = 242 bits (122), Expect = 1e-60 Identities = 253/295 (85%), Gaps = 5/295 (1%) Strand = Plus / Plus Query: 295 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 354 ||||||||||||||| |||||||||| |||| || | |||||||||| |||||||| Sbjct: 259 agcgaaagcgagtctgaatagggcgaacgtcataatttgtagacccgaacccgggtgatc 318 Query: 355 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 414 || ||||| |||||||||||||||| | |||| ||| |||||||||||||||| ||||| Sbjct: 319 taaccatggccaggatgaagcttgggtaaaaccaagtggaggtccgaaccgactaatgtt 378 Query: 415 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 474 ||| ||| |||||||||| |||||||||||||||||||||| |||||| | ||||||||| Sbjct: 379 gaaaaattagcggatgagctgtggttaggggtgaaatgccaatcgaactcggagctagct 438 Query: 475 ggttctccccgaaatgcgttgaggcgcagcagttgactggacatcta---ggggtaaagc 531 |||||||||||||||| ||||||||||||| || | |||| | || |||||||||| Sbjct: 439 ggttctccccgaaatgtgttgaggcgcagcggt--agtggaagtttagtcggggtaaagc 496 Query: 532 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 586 ||||||||| |||||||| | || ||||||||| ||||||||||||||||||| Sbjct: 497 actgtttcgccgcgggctgggagaccggtaccaaggcgaggcaaactctgaatac 551 Score = 121 bits (61), Expect = 3e-24 Identities = 127/149 (85%) Strand = Plus / Plus Query: 29 gagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaa 88 ||||||||||||||||||| ||||||||||||||| || |||||| | |||||||| Sbjct: 1 gagtagcatggggcacgtgaaatcccgtgtgaatctgcctcgaccacgaggtaaggctaa 60 Query: 89 atactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccca 148 ||| ||| | ||||||||||| ||| ||||||| ||||||||||||||||||||||| Sbjct: 61 atattcccgtgtgaccgatagagaaacagtaccgcgagggaaaggtgaaaagaaccccgg 120 Query: 149 gtgggtagtgaaatagaacgtgaaaccgt 177 ||| ||||||||||||| ||||||||| Sbjct: 121 aaggggagtgaaatagaacatgaaaccgt 149 Score = 65.9 bits (33), Expect = 1e-07 Identities = 36/37 (97%) Strand = Plus / Plus Query: 213 tctgaccgcgtgcctgttgaagaatgagccggcgact 249 |||||||| |||||||||||||||||||||||||||| Sbjct: 182 tctgaccgtgtgcctgttgaagaatgagccggcgact 218
>gb|DQ366719.1| Uncultured Prochlorococcus marinus clone ASNC729 genomic sequence Length = 38521 Score = 242 bits (122), Expect = 1e-60 Identities = 185/206 (89%) Strand = Plus / Minus Query: 295 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 354 ||||||||||||||||||||||||| |||||| || |||| |||||||||| ||||||| Sbjct: 20224 agcgaaagcgagtcttaatagggcgtttgtcagtgtttatagacccgaaccctggtgatc 20165 Query: 355 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 414 || ||||| |||||||||||||||| ||| || ||| |||||||||||||||||| ||| Sbjct: 20164 taaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccgactgaagtt 20105 Query: 415 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 474 ||| | |||||||||||| |||||||||||||||||||||| ||||||| ||||||||| Sbjct: 20104 gaaaattcagcggatgagctgtggttaggggtgaaatgccaatcgaaccaggagctagct 20045 Query: 475 ggttctccccgaaatgcgttgaggcg 500 ||||||||||||||| |||||||||| Sbjct: 20044 ggttctccccgaaatacgttgaggcg 20019 Score = 153 bits (77), Expect = 8e-34 Identities = 134/153 (87%) Strand = Plus / Minus Query: 26 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 85 ||||||||||| || ||||||||||| ||||||||||| || |||||||||| | ||||| Sbjct: 20485 cccgagtagcacggagcacgtggaattccgtgtgaatctgcgaggaccacctcgtaaggc 20426 Query: 86 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 145 ||| |||| ||| ||||||||||| ||| ||||||| |||||||||||||||||||||| Sbjct: 20425 taagtactactgtgtgaccgatagtgaaacagtaccgcgagggaaaggtgaaaagaaccc 20366 Query: 146 ccagtgggtagtgaaatagaacgtgaaaccgtg 178 | | ||| ||||||||||||| |||||||||| Sbjct: 20365 cgggaggggagtgaaatagaacatgaaaccgtg 20333 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Minus Query: 215 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 262 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 20299 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 20252 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 536 tttcggtgcgggctgcgcgagcggtaccaaatcga 570 ||||||||||||||||| |||||||||||||||| Sbjct: 19981 tttcggtgcgggctgcgaaagcggtaccaaatcga 19947 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,382,342 Number of Sequences: 3902068 Number of extensions: 3382342 Number of successful extensions: 95446 Number of sequences better than 10.0: 25482 Number of HSP's better than 10.0 without gapping: 25319 Number of HSP's successfully gapped in prelim test: 199 Number of HSP's that attempted gapping in prelim test: 53864 Number of HSP's gapped (non-prelim): 39726 length of query: 586 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 563 effective length of database: 17,143,297,704 effective search space: 9651676607352 effective search space used: 9651676607352 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
