>YLN9_CAEEL (Q09512) Hypothetical protein D2013.9 in chromosome II|
          Length = 662

 Score = 32.0 bits (71), Expect = 0.70
 Identities = 13/28 (46%), Positives = 18/28 (64%)
 Frame = +2

Query: 227 GIPVNHSTPPDLFLPCLMLLPQNCTFRV 310
           G  V HST P++ +  LM LPQNC + +
Sbjct: 211 GTRVRHSTEPNVRIVPLMFLPQNCAYSI 238

>CLC4F_MOUSE (P70194) C-type lectin domain family 4 member F (C-type lectin|
           superfamily member 13) (C-type lectin 13) (Kupffer cell
           receptor)
          Length = 548

 Score = 30.8 bits (68), Expect = 1.6
 Identities = 15/33 (45%), Positives = 19/33 (57%)
 Frame = -3

Query: 106 LIDKALKGALILWRNFLGHPWGNAQSGGFWSTN 8
           L D+  +G   +WR   G P+ NAQS GFW  N
Sbjct: 472 LTDQGTEG---IWRWVDGTPFNNAQSKGFWGKN 501

>HIF1A_ONCMY (Q98SW2) Hypoxia-inducible factor 1 alpha (HIF-1 alpha) (HIF1|
           alpha)
          Length = 766

 Score = 30.4 bits (67), Expect = 2.0
 Identities = 17/37 (45%), Positives = 21/37 (56%)
 Frame = +1

Query: 181 SVCSSDHVRNKFVDYWDPGEPFNTP*SFFALPNVAAS 291
           S+CSS  +  +   Y  PG PFN P S  A P +AAS
Sbjct: 590 SLCSSVRLTQEVHSY--PGSPFNAPGSLTASPALAAS 624

>POL1_BAYMG (Q04574) Genome polyprotein 1 [Contains: Protein P3; 6 kDa protein 1|
            (6K1); Cytoplasmic inclusion protein (CI); 6 kDa protein
            2 (6K2); Viral genome-linked protein (VPg); Nuclear
            inclusion protein A (EC 3.4.22.44) (NI-a) (NIa)
            (NIa-pro); Nuclea
          Length = 2412

 Score = 30.0 bits (66), Expect = 2.7
 Identities = 20/69 (28%), Positives = 32/69 (46%), Gaps = 3/69 (4%)
 Frame = -1

Query: 381  PA*PCPVQTHPHNLFAKINHPTNHTLNVQF*GSN---IRQGKKRSGGVEWFTGIPVVHKF 211
            PA    +QT+P N+ A I H T+ + N +    N   +RQ    +   +WF+   +    
Sbjct: 946  PARVVTLQTNPANIQASITHLTHMSKNYKTLIENNQHVRQSMMTNVMFKWFSSTRITKDL 1005

Query: 210  IPNMIRATD 184
              N+ R TD
Sbjct: 1006 DRNLRRCTD 1014

>POL1_BAYMJ (Q01206) Genome polyprotein 1 [Contains: Protein P3; 6 kDa protein 1|
            (6K1); Cytoplasmic inclusion protein (CI); 6 kDa protein
            2 (6K2); Viral genome-linked protein (VPg); Nuclear
            inclusion protein A (EC 3.4.22.44) (NI-a) (NIa)
            (NIa-pro); Nuclea
          Length = 2410

 Score = 29.6 bits (65), Expect = 3.5
 Identities = 20/69 (28%), Positives = 32/69 (46%), Gaps = 3/69 (4%)
 Frame = -1

Query: 381  PA*PCPVQTHPHNLFAKINHPTNHTLNVQF*GSN---IRQGKKRSGGVEWFTGIPVVHKF 211
            PA    +QT+P N+ A I H T+ + N +    N   +RQ    +   +WF+   +    
Sbjct: 946  PARVVTLQTNPANIQASITHLTHMSKNYKTLIENNQHVRQSMVTNVMYKWFSSTRITKDL 1005

Query: 210  IPNMIRATD 184
              N+ R TD
Sbjct: 1006 DRNLRRCTD 1014

>C12AA_BACTU (Q45754) Pesticidal crystal protein cry12Aa (Insecticidal|
           delta-endotoxin CryXIIA(a)) (Crystaline entomocidal
           protoxin) (142 kDa crystal protein)
          Length = 1257

 Score = 29.6 bits (65), Expect = 3.5
 Identities = 14/35 (40%), Positives = 20/35 (57%), Gaps = 4/35 (11%)
 Frame = -1

Query: 357 THPHNLFAKINHPT----NHTLNVQF*GSNIRQGK 265
           ++PHNL   + HPT    NHT++V     N+  GK
Sbjct: 667 SYPHNLLINLFHPTDPNRNHTIHVNNGDMNVDYGK 701

>CS1B_MOUSE (Q8CFG8) Complement C1s-B subcomponent precursor (EC 3.4.21.42) (C1|
           esterase) [Contains: Complement C1s-B subcomponent heavy
           chain; Complement C1s-B subcomponent light chain]
          Length = 688

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 11/19 (57%), Positives = 14/19 (73%)
 Frame = +1

Query: 265 FALPNVAASKLYI*GVVSW 321
           F +PNV A K Y+ G+VSW
Sbjct: 637 FQVPNVKAPKFYVAGLVSW 655

>LCE1B_HUMAN (Q5T7P3) Late cornified envelope protein 1B (Late envelope|
          protein 2) (Small proline-rich-like epidermal
          differentiation complex protein 2A)
          Length = 118

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 11/28 (39%), Positives = 14/28 (50%)
 Frame = +2

Query: 11 CAPKATRLCISPRMP*KVPPQNKSAFQC 94
          C PK    C++PR P K PP+      C
Sbjct: 16 CIPKCPPKCLTPRCPPKCPPKCPPVSSC 43


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 68,292,308
Number of Sequences: 219361
Number of extensions: 1365765
Number of successful extensions: 3193
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 3113
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3192
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2618960580
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)