ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal8l23 |
|---|---|
| Clone Library Name | barley_pub |
>gb|BT009457.1| Triticum aestivum clone wlp1c.pk007.f6:fis, full insert mRNA sequence Length = 1556 Score = 846 bits (427), Expect = 0.0 Identities = 458/467 (98%), Gaps = 1/467 (0%) Strand = Plus / Plus Query: 1 cggcttctccggnaaacagcggtgtcatcgtgctcgccgcgaccaacaggccggatgtgc 60 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 390 cggcttctccgg-aaacagcggtgtcatcgtgctcgccgcgaccaacaggccggatgtgc 448 Query: 61 ttgactccgcgcttctgcggccagggcggttcgatcggcaggtcaccgtcgaccgtccgg 120 | ||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 449 tcgactcggcgcttctgcggccagggcggtttgatcggcaggtcaccgtcgaccgtccgg 508 Query: 121 atgtagccggccgtgtcaggatccttgaggttcactccagaggaaaggcattggcgaagg 180 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 509 atgtcgccggccgtgtcaggatccttgaggttcactccagaggaaaggcattggcgaagg 568 Query: 181 atgtggactttgataaggttgccagaaggacacctggtttcaccggtgctgatcttcaga 240 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 569 atgtagactttgataaggttgccagaaggacacctggtttcaccggtgctgatcttcaga 628 Query: 241 acttgatgaatgaggctgccatccttgccgctcgtcgtgatctgaaggagataagcaagg 300 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 629 acttgatgaatgaggctgccatccttgctgctcgtcgtgatctgaaggagataagcaagg 688 Query: 301 acgagatctctgacgctctggagaggatcattgccgggcctgagaagaagaatgcagttg 360 ||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 689 acgagatctctgatgctctggagaggatcattgctgggcctgagaagaagaatgcagttg 748 Query: 361 tttcagaacagaagaggaagcttgtggcttaccatgaggctggacatgccctcgtcggtg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 749 tttcagaacagaagaggaagcttgtggcttaccatgaggctggacatgccctcgtcggtg 808 Query: 421 ccctgatgcctgaatatgaccctgttgccaagatttccatcattcct 467 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 809 ccctgatgcctgaatatgaccctgttgccaagatttccatcattcct 855
>dbj|AK065019.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001F19, full insert sequence Length = 2378 Score = 480 bits (242), Expect = e-132 Identities = 398/450 (88%) Strand = Plus / Plus Query: 18 agcggtgtcatcgtgctcgccgcgaccaacaggccggatgtgcttgactccgcgcttctg 77 ||||||||||| |||||||||||||| |||||||| |||||||| ||| | || ||||| Sbjct: 1141 agcggtgtcattgtgctcgccgcgacaaacaggcctgatgtgctcgacgcggctcttctt 1200 Query: 78 cggccagggcggttcgatcggcaggtcaccgtcgaccgtccggatgtagccggccgtgtc 137 || || ||| |||||||||||||||||||||| ||| | |||||||| ||||| |||||| Sbjct: 1201 cgccctgggaggttcgatcggcaggtcaccgtagacaggccggatgtcgccgggcgtgtc 1260 Query: 138 aggatccttgaggttcactccagaggaaaggcattggcgaaggatgtggactttgataag 197 | ||| |||||||||||||| ||||||||||| |||| || ||||| |||||||| || Sbjct: 1261 aagattcttgaggttcactcgagaggaaaggctctggcaaaagatgtcgactttgagaaa 1320 Query: 198 gttgccagaaggacacctggtttcaccggtgctgatcttcagaacttgatgaatgaggct 257 ||||| | || || ||||||||||| || ||||||||||| |||||||||||||||||| Sbjct: 1321 attgcccggagaacccctggtttcactggagctgatcttcaaaacttgatgaatgaggct 1380 Query: 258 gccatccttgccgctcgtcgtgatctgaaggagataagcaaggacgagatctctgacgct 317 || || ||||| ||||||||||||||||||||||| |||||||| ||||||||||| ||| Sbjct: 1381 gctattcttgctgctcgtcgtgatctgaaggagattagcaaggatgagatctctgatgct 1440 Query: 318 ctggagaggatcattgccgggcctgagaagaagaatgcagttgtttcagaacagaagagg 377 |||||||||||||||| |||||||||||||| ||||| |||||||||||| |||||||| Sbjct: 1441 ttggagaggatcattgctgggcctgagaagaaaaatgctgttgtttcagaagagaagagg 1500 Query: 378 aagcttgtggcttaccatgaggctggacatgccctcgtcggtgccctgatgcctgaatat 437 | ||||||||||||||||||||||| |||||||| || |||||||| |||||||||||| Sbjct: 1501 agacttgtggcttaccatgaggctggtcatgcccttgttggtgccctcatgcctgaatat 1560 Query: 438 gaccctgttgccaagatttccatcattcct 467 ||||||||||| |||||||||||||||||| Sbjct: 1561 gaccctgttgctaagatttccatcattcct 1590
>dbj|AK061771.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-039-C10, full insert sequence Length = 1325 Score = 474 bits (239), Expect = e-130 Identities = 398/450 (88%), Gaps = 2/450 (0%) Strand = Plus / Plus Query: 18 agcggtgtcatcgtgctcgccgcgaccaacaggccggatgtgcttgactccgcgcttctg 77 ||||||||||| |||||||||||||| |||||||| |||||||| ||| | || ||||| Sbjct: 199 agcggtgtcattgtgctcgccgcgacaaacaggcctgatgtgctcgacgcggctcttctt 258 Query: 78 cggccagggcggttcgatcggcaggtcaccgtcgaccgtccggatgtagccggccgtgtc 137 || || ||| |||||||||||||||||||||| ||| | |||||||| ||||| |||||| Sbjct: 259 cgccctgggaggttcgatcggcaggtcaccgtagacaggccggatgtcgccgggcgtgtc 318 Query: 138 aggatccttgaggttcactccagaggaaaggcattggcgaaggatgtggactttgataag 197 | ||| |||||||||||||| ||||||||||| |||| || ||||| |||||||| || Sbjct: 319 aagattcttgaggttcactcgagaggaaaggc--tggcaaaagatgtcgactttgagaaa 376 Query: 198 gttgccagaaggacacctggtttcaccggtgctgatcttcagaacttgatgaatgaggct 257 ||||| | || || ||||||||||| || ||||||||||| |||||||||||||||||| Sbjct: 377 attgcccggagaacccctggtttcactggagctgatcttcaaaacttgatgaatgaggct 436 Query: 258 gccatccttgccgctcgtcgtgatctgaaggagataagcaaggacgagatctctgacgct 317 || || ||||| ||||||||||||||||||||||| |||||||| ||||||||||| ||| Sbjct: 437 gctattcttgctgctcgtcgtgatctgaaggagattagcaaggatgagatctctgatgct 496 Query: 318 ctggagaggatcattgccgggcctgagaagaagaatgcagttgtttcagaacagaagagg 377 |||||||||||||||| |||||||||||||| ||||| |||||||||||| |||||||| Sbjct: 497 ttggagaggatcattgctgggcctgagaagaaaaatgctgttgtttcagaagagaagagg 556 Query: 378 aagcttgtggcttaccatgaggctggacatgccctcgtcggtgccctgatgcctgaatat 437 | ||||||||||||||||||||||| |||||||| || |||||||| |||||||||||| Sbjct: 557 agacttgtggcttaccatgaggctggtcatgcccttgttggtgccctcatgcctgaatat 616 Query: 438 gaccctgttgccaagatttccatcattcct 467 ||||||||||| |||||||||||||||||| Sbjct: 617 gaccctgttgctaagatttccatcattcct 646
>gb|AY103957.1| Zea mays PCO116832 mRNA sequence Length = 1820 Score = 367 bits (185), Expect = 2e-98 Identities = 383/449 (85%) Strand = Plus / Plus Query: 15 aacagcggtgtcatcgtgctcgccgcgaccaacaggccggatgtgcttgactccgcgctt 74 |||||||||||||| ||||| ||||| ||||||||||| |||||||| ||||||||||| Sbjct: 490 aacagcggtgtcattgtgcttgccgccaccaacaggcccgatgtgctggactccgcgctc 549 Query: 75 ctgcggccagggcggttcgatcggcaggtcaccgtcgaccgtccggatgtagccggccgt 134 || || |||||| | || ||| ||||||||||||| ||| | || ||||| ||||| || Sbjct: 550 ctacgaccagggagatttgataggcaggtcaccgttgacaggccagatgttgccggacgc 609 Query: 135 gtcaggatccttgaggttcactccagaggaaaggcattggcgaaggatgtggactttgat 194 |||| ||| |||||||| |||||| |||||||||| |||||||| ||||| || |||||| Sbjct: 610 gtcaagattcttgaggtccactcccgaggaaaggctttggcgaaagatgttgattttgat 669 Query: 195 aaggttgccagaaggacacctggtttcaccggtgctgatcttcagaacttgatgaatgag 254 || |||| |||||||| ||||||||||| |||||||| || || ||| | ||||||||| Sbjct: 670 aaaattgctagaaggacccctggtttcactggtgctgacctccaaaacctcatgaatgag 729 Query: 255 gctgccatccttgccgctcgtcgtgatctgaaggagataagcaaggacgagatctctgac 314 |||||||||||||| ||||| |||||||| ||||| || |||||||| ||||||||||| Sbjct: 730 gctgccatccttgctgctcgccgtgatcttaaggaaattagcaaggatgagatctctgat 789 Query: 315 gctctggagaggatcattgccgggcctgagaagaagaatgcagttgtttcagaacagaag 374 ||||| ||||| |||||||| || ||||||||||| ||||| |||||||| || ||||| Sbjct: 790 gctcttgagagaatcattgctggccctgagaagaaaaatgctgttgtttccgaggagaag 849 Query: 375 aggaagcttgtggcttaccatgaggctggacatgccctcgtcggtgccctgatgcctgaa 434 | || ||| || ||||||||||||||||| |||||||| ||||| ||||| ||||| || Sbjct: 850 aagaggctcgtcgcttaccatgaggctggccatgcccttgtcggcgccctcatgccagag 909 Query: 435 tatgaccctgttgccaagatttccatcat 463 ||||| || || ||||||||||||||||| Sbjct: 910 tatgatccagtagccaagatttccatcat 938
>gb|BT009148.1| Triticum aestivum clone wl1n.pk0059.g7:fis, full insert mRNA sequence Length = 890 Score = 341 bits (172), Expect = 1e-90 Identities = 181/184 (98%) Strand = Plus / Plus Query: 284 gaaggagataagcaaggacgagatctctgacgctctggagaggatcattgccgggcctga 343 |||||||||||||||||||||||||||||| |||||||||||||||||||| ||||| || Sbjct: 8 gaaggagataagcaaggacgagatctctgatgctctggagaggatcattgctgggcccga 67 Query: 344 gaagaagaatgcagttgtttcagaacagaagaggaagcttgtggcttaccatgaggctgg 403 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 68 gaagaagaatgcagttgtttcagaacagaagaggaagcttgtggcttaccatgaggctgg 127 Query: 404 acatgccctcgtcggtgccctgatgcctgaatatgaccctgttgccaagatttccatcat 463 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 128 acatgccctcgtcggtgccctgatgcctgaatatgaccctgttgccaagatttccatcat 187 Query: 464 tcct 467 |||| Sbjct: 188 tcct 191
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 264 bits (133), Expect = 2e-67 Identities = 220/249 (88%) Strand = Plus / Minus Query: 148 aggttcactccagaggaaaggcattggcgaaggatgtggactttgataaggttgccagaa 207 |||||||||| ||||||||||| |||| || ||||| |||||||| || ||||| | | Sbjct: 30360113 aggttcactcgagaggaaaggctctggcaaaagatgtcgactttgagaaaattgcccgga 30360054 Query: 208 ggacacctggtttcaccggtgctgatcttcagaacttgatgaatgaggctgccatccttg 267 | || ||||||||||| || ||||||||||| |||||||||||||||||||| || |||| Sbjct: 30360053 gaacccctggtttcactggagctgatcttcaaaacttgatgaatgaggctgctattcttg 30359994 Query: 268 ccgctcgtcgtgatctgaaggagataagcaaggacgagatctctgacgctctggagagga 327 | ||||||||||||||||||||||| |||||||| ||||||||||| ||| ||||||||| Sbjct: 30359993 ctgctcgtcgtgatctgaaggagattagcaaggatgagatctctgatgctttggagagga 30359934 Query: 328 tcattgccgggcctgagaagaagaatgcagttgtttcagaacagaagaggaagcttgtgg 387 ||||||| |||||||||||||| ||||| |||||||||||| ||||||||| ||||||| Sbjct: 30359933 tcattgctgggcctgagaagaaaaatgctgttgtttcagaagagaagaggagacttgtgg 30359874 Query: 388 cttaccatg 396 ||||||||| Sbjct: 30359873 cttaccatg 30359865 Score = 123 bits (62), Expect = 5e-25 Identities = 116/134 (86%) Strand = Plus / Minus Query: 18 agcggtgtcatcgtgctcgccgcgaccaacaggccggatgtgcttgactccgcgcttctg 77 ||||||||||| |||||||||||||| |||||||| |||||||| ||| | || ||||| Sbjct: 30360948 agcggtgtcattgtgctcgccgcgacaaacaggcctgatgtgctcgacgcggctcttctt 30360889 Query: 78 cggccagggcggttcgatcggcaggtcaccgtcgaccgtccggatgtagccggccgtgtc 137 || || ||| |||||||||||||||||||||| ||| | |||||||| ||||| |||||| Sbjct: 30360888 cgccctgggaggttcgatcggcaggtcaccgtagacaggccggatgtcgccgggcgtgtc 30360829 Query: 138 aggatccttgaggt 151 | ||| |||||||| Sbjct: 30360828 aagattcttgaggt 30360815 Score = 103 bits (52), Expect = 5e-19 Identities = 67/72 (93%) Strand = Plus / Minus Query: 396 gaggctggacatgccctcgtcggtgccctgatgcctgaatatgaccctgttgccaagatt 455 |||||||| |||||||| || |||||||| ||||||||||||||||||||||| |||||| Sbjct: 30359771 gaggctggtcatgcccttgttggtgccctcatgcctgaatatgaccctgttgctaagatt 30359712 Query: 456 tccatcattcct 467 |||||||||||| Sbjct: 30359711 tccatcattcct 30359700
>dbj|AP003685.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0548E04 Length = 138037 Score = 264 bits (133), Expect = 2e-67 Identities = 220/249 (88%) Strand = Plus / Minus Query: 148 aggttcactccagaggaaaggcattggcgaaggatgtggactttgataaggttgccagaa 207 |||||||||| ||||||||||| |||| || ||||| |||||||| || ||||| | | Sbjct: 106708 aggttcactcgagaggaaaggctctggcaaaagatgtcgactttgagaaaattgcccgga 106649 Query: 208 ggacacctggtttcaccggtgctgatcttcagaacttgatgaatgaggctgccatccttg 267 | || ||||||||||| || ||||||||||| |||||||||||||||||||| || |||| Sbjct: 106648 gaacccctggtttcactggagctgatcttcaaaacttgatgaatgaggctgctattcttg 106589 Query: 268 ccgctcgtcgtgatctgaaggagataagcaaggacgagatctctgacgctctggagagga 327 | ||||||||||||||||||||||| |||||||| ||||||||||| ||| ||||||||| Sbjct: 106588 ctgctcgtcgtgatctgaaggagattagcaaggatgagatctctgatgctttggagagga 106529 Query: 328 tcattgccgggcctgagaagaagaatgcagttgtttcagaacagaagaggaagcttgtgg 387 ||||||| |||||||||||||| ||||| |||||||||||| ||||||||| ||||||| Sbjct: 106528 tcattgctgggcctgagaagaaaaatgctgttgtttcagaagagaagaggagacttgtgg 106469 Query: 388 cttaccatg 396 ||||||||| Sbjct: 106468 cttaccatg 106460 Score = 123 bits (62), Expect = 5e-25 Identities = 116/134 (86%) Strand = Plus / Minus Query: 18 agcggtgtcatcgtgctcgccgcgaccaacaggccggatgtgcttgactccgcgcttctg 77 ||||||||||| |||||||||||||| |||||||| |||||||| ||| | || ||||| Sbjct: 107543 agcggtgtcattgtgctcgccgcgacaaacaggcctgatgtgctcgacgcggctcttctt 107484 Query: 78 cggccagggcggttcgatcggcaggtcaccgtcgaccgtccggatgtagccggccgtgtc 137 || || ||| |||||||||||||||||||||| ||| | |||||||| ||||| |||||| Sbjct: 107483 cgccctgggaggttcgatcggcaggtcaccgtagacaggccggatgtcgccgggcgtgtc 107424 Query: 138 aggatccttgaggt 151 | ||| |||||||| Sbjct: 107423 aagattcttgaggt 107410 Score = 103 bits (52), Expect = 5e-19 Identities = 67/72 (93%) Strand = Plus / Minus Query: 396 gaggctggacatgccctcgtcggtgccctgatgcctgaatatgaccctgttgccaagatt 455 |||||||| |||||||| || |||||||| ||||||||||||||||||||||| |||||| Sbjct: 106366 gaggctggtcatgcccttgttggtgccctcatgcctgaatatgaccctgttgctaagatt 106307 Query: 456 tccatcattcct 467 |||||||||||| Sbjct: 106306 tccatcattcct 106295
>ref|NM_103909.3| Arabidopsis thaliana FTSH1; ATP-dependent peptidase/ ATPase/ metallopeptidase AT1G50250 (FTSH1) mRNA, complete cds Length = 2473 Score = 230 bits (116), Expect = 3e-57 Identities = 245/288 (85%) Strand = Plus / Plus Query: 180 gatgtggactttgataaggttgccagaaggacacctggtttcaccggtgctgatcttcag 239 |||||||||||||| ||||||||||||||||| ||||||||||| |||||||| | || Sbjct: 1490 gatgtggactttgacaaggttgccagaaggacccctggtttcacgggtgctgacttacaa 1549 Query: 240 aacttgatgaatgaggctgccatccttgccgctcgtcgtgatctgaaggagataagcaag 299 ||| |||||||||| || || || ||||| ||| | ||||| || ||||| ||||||||| Sbjct: 1550 aacctgatgaatgaagcggcgattcttgcggctaggcgtgagcttaaggaaataagcaag 1609 Query: 300 gacgagatctctgacgctctggagaggatcattgccgggcctgagaagaagaatgcagtt 359 || || |||||||| ||||| |||||||||||||| || ||||||||||||||||||||| Sbjct: 1610 gatgaaatctctgatgctcttgagaggatcattgctggacctgagaagaagaatgcagtt 1669 Query: 360 gtttcagaacagaagaggaagcttgtggcttaccatgaggctggacatgccctcgtcggt 419 || || ||| |||||| || ||||| || |||||||||||||| ||||| || || ||| Sbjct: 1670 gtctctgaagagaagaagagacttgttgcataccatgaggctggtcatgctctagtgggt 1729 Query: 420 gccctgatgcctgaatatgaccctgttgccaagatttccatcattcct 467 || || ||||| |||||||| || ||||| |||||||| ||||||||| Sbjct: 1730 gctcttatgccagaatatgatccggttgcaaagatttctatcattcct 1777
>gb|AY123034.1| Arabidopsis thaliana putative chloroplast FtsH protease (At1g50250) mRNA, complete cds Length = 2182 Score = 230 bits (116), Expect = 3e-57 Identities = 245/288 (85%) Strand = Plus / Plus Query: 180 gatgtggactttgataaggttgccagaaggacacctggtttcaccggtgctgatcttcag 239 |||||||||||||| ||||||||||||||||| ||||||||||| |||||||| | || Sbjct: 1357 gatgtggactttgacaaggttgccagaaggacccctggtttcacgggtgctgacttacaa 1416 Query: 240 aacttgatgaatgaggctgccatccttgccgctcgtcgtgatctgaaggagataagcaag 299 ||| |||||||||| || || || ||||| ||| | ||||| || ||||| ||||||||| Sbjct: 1417 aacctgatgaatgaagcggcgattcttgcggctaggcgtgagcttaaggaaataagcaag 1476 Query: 300 gacgagatctctgacgctctggagaggatcattgccgggcctgagaagaagaatgcagtt 359 || || |||||||| ||||| |||||||||||||| || ||||||||||||||||||||| Sbjct: 1477 gatgaaatctctgatgctcttgagaggatcattgctggacctgagaagaagaatgcagtt 1536 Query: 360 gtttcagaacagaagaggaagcttgtggcttaccatgaggctggacatgccctcgtcggt 419 || || ||| |||||| || ||||| || |||||||||||||| ||||| || || ||| Sbjct: 1537 gtctctgaagagaagaagagacttgttgcataccatgaggctggtcatgctctagtgggt 1596 Query: 420 gccctgatgcctgaatatgaccctgttgccaagatttccatcattcct 467 || || ||||| |||||||| || ||||| |||||||| ||||||||| Sbjct: 1597 gctcttatgccagaatatgatccggttgcaaagatttctatcattcct 1644
>gb|AY091095.1| Arabidopsis thaliana putative chloroplast FtsH protease (At1g50250) mRNA, complete cds Length = 2452 Score = 230 bits (116), Expect = 3e-57 Identities = 245/288 (85%) Strand = Plus / Plus Query: 180 gatgtggactttgataaggttgccagaaggacacctggtttcaccggtgctgatcttcag 239 |||||||||||||| ||||||||||||||||| ||||||||||| |||||||| | || Sbjct: 1453 gatgtggactttgacaaggttgccagaaggacccctggtttcacgggtgctgacttacaa 1512 Query: 240 aacttgatgaatgaggctgccatccttgccgctcgtcgtgatctgaaggagataagcaag 299 ||| |||||||||| || || || ||||| ||| | ||||| || ||||| ||||||||| Sbjct: 1513 aacctgatgaatgaagcggcgattcttgcggctaggcgtgagcttaaggaaataagcaag 1572 Query: 300 gacgagatctctgacgctctggagaggatcattgccgggcctgagaagaagaatgcagtt 359 || || |||||||| ||||| |||||||||||||| || ||||||||||||||||||||| Sbjct: 1573 gatgaaatctctgatgctcttgagaggatcattgctggacctgagaagaagaatgcagtt 1632 Query: 360 gtttcagaacagaagaggaagcttgtggcttaccatgaggctggacatgccctcgtcggt 419 || || ||| |||||| || ||||| || |||||||||||||| ||||| || || ||| Sbjct: 1633 gtctctgaagagaagaagagacttgttgcataccatgaggctggtcatgctctagtgggt 1692 Query: 420 gccctgatgcctgaatatgaccctgttgccaagatttccatcattcct 467 || || ||||| |||||||| || ||||| |||||||| ||||||||| Sbjct: 1693 gctcttatgccagaatatgatccggttgcaaagatttctatcattcct 1740
>emb|X99808.1|ATFTSH A.thaliana mRNA for chloroplast FtsH protease Length = 2447 Score = 222 bits (112), Expect = 8e-55 Identities = 244/288 (84%) Strand = Plus / Plus Query: 180 gatgtggactttgataaggttgccagaaggacacctggtttcaccggtgctgatcttcag 239 |||||||||||||| ||||||||||||||||| ||||||||||| |||||||| | || Sbjct: 1488 gatgtggactttgacaaggttgccagaaggacccctggtttcacgggtgctgacttacaa 1547 Query: 240 aacttgatgaatgaggctgccatccttgccgctcgtcgtgatctgaaggagataagcaag 299 ||| |||||||||| || || || ||||| ||| | ||||| | ||||| ||||||||| Sbjct: 1548 aacctgatgaatgaagcggcgattcttgcggctaggcgtgacgttaaggaaataagcaag 1607 Query: 300 gacgagatctctgacgctctggagaggatcattgccgggcctgagaagaagaatgcagtt 359 || || |||||||| ||||| |||||||||||||| || ||||||||||||||||||||| Sbjct: 1608 gatgaaatctctgatgctcttgagaggatcattgctggacctgagaagaagaatgcagtt 1667 Query: 360 gtttcagaacagaagaggaagcttgtggcttaccatgaggctggacatgccctcgtcggt 419 || || ||| |||||| || ||||| || |||||||||||||| ||||| || || ||| Sbjct: 1668 gtctctgaagagaagaagagacttgttgcataccatgaggctggtcatgctctagtgggt 1727 Query: 420 gccctgatgcctgaatatgaccctgttgccaagatttccatcattcct 467 || || ||||| |||||||| || ||||| |||||||| ||||||||| Sbjct: 1728 gctcttatgccagaatatgatccggttgcaaagatttctatcattcct 1775
>emb|BX815046.1|CNS0AE0R Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS28ZC04 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 2428 Score = 222 bits (112), Expect = 8e-55 Identities = 244/288 (84%) Strand = Plus / Plus Query: 180 gatgtggactttgataaggttgccagaaggacacctggtttcaccggtgctgatcttcag 239 |||||||||||||| ||||||||||||||||| ||||||||||| |||||||| | || Sbjct: 1489 gatgtggactttgacaaggttgccagaaggacccctggtttcacgggtgctgacttacaa 1548 Query: 240 aacttgatgaatgaggctgccatccttgccgctcgtcgtgatctgaaggagataagcaag 299 ||| |||||||||| || || || ||||| ||| | ||||| || ||||| ||||||||| Sbjct: 1549 aacctgatgaatgaagcggcgattcttgcggctaggcgtgagcttaaggaaataagcaag 1608 Query: 300 gacgagatctctgacgctctggagaggatcattgccgggcctgagaagaagaatgcagtt 359 || || |||||||| ||||| |||||||||||||| || ||||||||||||||||||||| Sbjct: 1609 gatgaaatctctgatgctcttgagaggatcattgctggacctgagaagaagaatgcagtt 1668 Query: 360 gtttcagaacagaagaggaagcttgtggcttaccatgaggctggacatgccctcgtcggt 419 || || ||| |||||| || ||||| || ||||||||||||| ||||| || || ||| Sbjct: 1669 gtctctgaagagaagaagagacttgttgcacaccatgaggctggtcatgctctagtgggt 1728 Query: 420 gccctgatgcctgaatatgaccctgttgccaagatttccatcattcct 467 || || ||||| |||||||| || ||||| |||||||| ||||||||| Sbjct: 1729 gctcttatgccagaatatgatccggttgcaaagatttctatcattcct 1776
>gb|DQ339462.1| Vitis pseudoreticulata ATPase mRNA, complete cds Length = 600 Score = 212 bits (107), Expect = 8e-52 Identities = 272/327 (83%) Strand = Plus / Plus Query: 140 gatccttgaggttcactccagaggaaaggcattggcgaaggatgtggactttgataaggt 199 ||||||| |||| ||||| ||||| |||||| | || |||||||| |||||||| ||| | Sbjct: 144 gatccttcaggtgcactcaagagggaaggcactagccaaggatgtagactttgaaaagat 203 Query: 200 tgccagaaggacacctggtttcaccggtgctgatcttcagaacttgatgaatgaggctgc 259 ||| |||||||| || || ||||| || ||||| | |||||| ||||||||||||| || Sbjct: 204 tgcgagaaggaccccaggcttcacaggggctgacttgcagaacctgatgaatgaggcagc 263 Query: 260 catccttgccgctcgtcgtgatctgaaggagataagcaaggacgagatctctgacgctct 319 |||||| || ||| | ||||| || ||||||||||||||||| ||||| ||||| || || Sbjct: 264 catcctcgcagctaggcgtgacctcaaggagataagcaaggatgagatatctgatgccct 323 Query: 320 ggagaggatcattgccgggcctgagaagaagaatgcagttgtttcagaacagaagaggaa 379 ||||||||| ||||| ||||| |||||||| ||||| || || ||||| |||||| ||| Sbjct: 324 ggagaggataattgctgggccagagaagaaaaatgctgtggtctcagacgagaagaagaa 383 Query: 380 gcttgtggcttaccatgaggctggacatgccctcgtcggtgccctgatgcctgaatatga 439 | || || || ||||||||||| ||||| | |||||||| || |||||||||||||| Sbjct: 384 attagttgcctatcatgaggctgggcatgcattggtcggtgcacttatgcctgaatatga 443 Query: 440 ccctgttgccaagatttccatcattcc 466 |||||| |||||||| ||||||||||| Sbjct: 444 ccctgtggccaagatatccatcattcc 470
>emb|X90472.1|CAATPASE C.annuum mRNA for ATPase protein Length = 1989 Score = 192 bits (97), Expect = 7e-46 Identities = 274/333 (82%) Strand = Plus / Plus Query: 135 gtcaggatccttgaggttcactccagaggaaaggcattggcgaaggatgtggactttgat 194 |||||||| ||| |||| || || ||||||||||| | || |||||||||||||||||| Sbjct: 1218 gtcaggattcttcaggtacattctagaggaaaggcccttgcaaaggatgtggactttgat 1277 Query: 195 aaggttgccagaaggacacctggtttcaccggtgctgatcttcagaacttgatgaatgag 254 ||| ||||||| || || || |||||||| ||||| ||| | || ||||||||||| || Sbjct: 1278 aagattgccaggagaactccaggtttcactggtgcagatttacaaaacttgatgaacgaa 1337 Query: 255 gctgccatccttgccgctcgtcgtgatctgaaggagataagcaaggacgagatctctgac 314 || ||||||||||| ||| | ||||| || ||||| ||||| || || ||||| ||||| Sbjct: 1338 gcagccatccttgcagctaggcgtgacctaaaggaaataagtaaagatgagatatctgat 1397 Query: 315 gctctggagaggatcattgccgggcctgagaagaagaatgcagttgtttcagaacagaag 374 |||||||||||||| ||||| || || |||||||| || || ||||| ||||| ||||| Sbjct: 1398 gctctggagaggataattgctggtccggagaagaaaaacgctgttgtctcagatgagaag 1457 Query: 375 aggaagcttgtggcttaccatgaggctggacatgccctcgtcggtgccctgatgcctgaa 434 | |||||| || ||||| ||||||||||| |||||| | || ||||| || ||||| || Sbjct: 1458 aagaagctggtagcttatcatgaggctggccatgccttggttggtgcacttatgcccgag 1517 Query: 435 tatgaccctgttgccaagatttccatcattcct 467 ||||| |||||||||||||| || || |||||| Sbjct: 1518 tatgatcctgttgccaagatatctataattcct 1550
>emb|Y12780.1|ATAAAA A.thaliana mRNA for ATPase, partial Length = 2190 Score = 186 bits (94), Expect = 4e-44 Identities = 196/230 (85%) Strand = Plus / Plus Query: 180 gatgtggactttgataaggttgccagaaggacacctggtttcaccggtgctgatcttcag 239 |||||||||||||| ||||||||||||||| | ||||||||||| |||||||| | || Sbjct: 1153 gatgtggactttgacaaggttgccagaaggtcccctggtttcacgggtgctgacttacaa 1212 Query: 240 aacttgatgaatgaggctgccatccttgccgctcgtcgtgatctgaaggagataagcaag 299 ||| |||||||||| || || || ||||| ||| | ||||| || ||||| ||||||||| Sbjct: 1213 aacctgatgaatgaagcggcgattcttgcggctaggcgtgagcttaaggaaataagcaag 1272 Query: 300 gacgagatctctgacgctctggagaggatcattgccgggcctgagaagaagaatgcagtt 359 || || |||||||| ||||| |||||||||||||| || ||||||||||||||||||||| Sbjct: 1273 gatgaaatctctgatgctcttgagaggatcattgctggacctgagaagaagaatgcagtt 1332 Query: 360 gtttcagaacagaagaggaagcttgtggcttaccatgaggctggacatgc 409 || || ||| |||||| || ||||| || |||||||||||||| ||||| Sbjct: 1333 gtctctgaagagaagaagagacttgttgcataccatgaggctggtcatgc 1382
>gb|AC007980.1| Arabidopsis thaliana chromosome I BAC F14I3 genomic sequence, complete sequence Length = 100975 Score = 176 bits (89), Expect = 4e-41 Identities = 185/217 (85%) Strand = Plus / Plus Query: 180 gatgtggactttgataaggttgccagaaggacacctggtttcaccggtgctgatcttcag 239 |||||||||||||| ||||||||||||||||| ||||||||||| |||||||| | || Sbjct: 61377 gatgtggactttgacaaggttgccagaaggacccctggtttcacgggtgctgacttacaa 61436 Query: 240 aacttgatgaatgaggctgccatccttgccgctcgtcgtgatctgaaggagataagcaag 299 ||| |||||||||| || || || ||||| ||| | ||||| || ||||| ||||||||| Sbjct: 61437 aacctgatgaatgaagcggcgattcttgcggctaggcgtgagcttaaggaaataagcaag 61496 Query: 300 gacgagatctctgacgctctggagaggatcattgccgggcctgagaagaagaatgcagtt 359 || || |||||||| ||||| |||||||||||||| || ||||||||||||||||||||| Sbjct: 61497 gatgaaatctctgatgctcttgagaggatcattgctggacctgagaagaagaatgcagtt 61556 Query: 360 gtttcagaacagaagaggaagcttgtggcttaccatg 396 || || ||| |||||| || ||||| || ||||||| Sbjct: 61557 gtctctgaagagaagaagagacttgttgcataccatg 61593
>dbj|AB017480.2| Nicotiana tabacum mRNA for chloroplast FtsH protease, complete cds Length = 2447 Score = 172 bits (87), Expect = 7e-40 Identities = 240/291 (82%) Strand = Plus / Plus Query: 177 aaggatgtggactttgataaggttgccagaaggacacctggtttcaccggtgctgatctt 236 ||||||||||||||||| ||| ||||||| || ||||| |||| ||| ||||| ||| | Sbjct: 1348 aaggatgtggactttgagaagattgccaggagaacaccgggttacactggtgcagatttg 1407 Query: 237 cagaacttgatgaatgaggctgccatccttgccgctcgtcgtgatctgaaggagataagc 296 || ||||||||||| || || || |||||||| ||| | ||||| || ||||| ||||| Sbjct: 1408 caaaacttgatgaacgaagcagcaatccttgcagctaggcgtgaactaaaggaaataagt 1467 Query: 297 aaggacgagatctctgacgctctggagaggatcattgccgggcctgagaagaagaatgca 356 || || ||||| ||||| |||||||||||||| |||||||| || |||||||| ||||| Sbjct: 1468 aaagatgagatatctgatgctctggagaggataattgccggcccagagaagaaaaatgct 1527 Query: 357 gttgtttcagaacagaagaggaagcttgtggcttaccatgaggctggacatgccctcgtc 416 ||||| ||||| |||||| |||||| || ||||| |||||||| || |||||| | || Sbjct: 1528 gttgtctcagatgagaagaagaagctggtagcttatcatgaggccggccatgccttggtt 1587 Query: 417 ggtgccctgatgcctgaatatgaccctgttgccaagatttccatcattcct 467 ||||| || ||||| || ||||| |||||||||||||| || || |||||| Sbjct: 1588 ggtgcacttatgcccgagtatgatcctgttgccaagatatctataattcct 1638
>ref|NM_123592.2| Arabidopsis thaliana VAR1 (VARIEGATED 1); ATP-dependent peptidase/ ATPase/ metallopeptidase AT5G42270 (VAR1) mRNA, complete cds Length = 3058 Score = 133 bits (67), Expect = 6e-28 Identities = 196/239 (82%) Strand = Plus / Plus Query: 216 ggtttcaccggtgctgatcttcagaacttgatgaatgaggctgccatccttgccgctcgt 275 |||||||| ||||||||| | |||||| |||||||||| ||||| || ||||| ||| | Sbjct: 1530 ggtttcactggtgctgatttgcagaacctgatgaatgaagctgcgattcttgctgctaga 1589 Query: 276 cgtgatctgaaggagataagcaaggacgagatctctgacgctctggagaggatcattgcc 335 ||||| || ||||||||||||||||| || || ||||| ||||| |||||||||||||| Sbjct: 1590 cgtgagcttaaggagataagcaaggatgaaatatctgatgctcttgagaggatcattgct 1649 Query: 336 gggcctgagaagaagaatgcagttgtttcagaacagaagaggaagcttgtggcttaccat 395 || ||||| |||||||| || ||||| || || |||||| | ||||| ||||||||| Sbjct: 1650 ggacctgaaaagaagaacgctgttgtctctgaggagaagaaaagacttgttgcttaccat 1709 Query: 396 gaggctggacatgccctcgtcggtgccctgatgcctgaatatgaccctgttgccaagat 454 |||||||| ||||| | || ||||| || ||||| || ||||| || || |||||||| Sbjct: 1710 gaggctgggcatgctttagttggtgcacttatgccggagtatgatccagtggccaagat 1768
>gb|AY126987.1| Arabidopsis thaliana AT5g42270/K5J14_7 mRNA, complete cds Length = 2311 Score = 133 bits (67), Expect = 6e-28 Identities = 196/239 (82%) Strand = Plus / Plus Query: 216 ggtttcaccggtgctgatcttcagaacttgatgaatgaggctgccatccttgccgctcgt 275 |||||||| ||||||||| | |||||| |||||||||| ||||| || ||||| ||| | Sbjct: 1456 ggtttcactggtgctgatttgcagaacctgatgaatgaagctgcgattcttgctgctaga 1515 Query: 276 cgtgatctgaaggagataagcaaggacgagatctctgacgctctggagaggatcattgcc 335 ||||| || ||||||||||||||||| || || ||||| ||||| |||||||||||||| Sbjct: 1516 cgtgagcttaaggagataagcaaggatgaaatatctgatgctcttgagaggatcattgct 1575 Query: 336 gggcctgagaagaagaatgcagttgtttcagaacagaagaggaagcttgtggcttaccat 395 || ||||| |||||||| || ||||| || || |||||| | ||||| ||||||||| Sbjct: 1576 ggacctgaaaagaagaacgctgttgtctctgaggagaagaaaagacttgttgcttaccat 1635 Query: 396 gaggctggacatgccctcgtcggtgccctgatgcctgaatatgaccctgttgccaagat 454 |||||||| ||||| | || ||||| || ||||| || ||||| || || |||||||| Sbjct: 1636 gaggctgggcatgctttagttggtgcacttatgccggagtatgatccagtggccaagat 1694
>dbj|AB023032.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K5J14 Length = 59762 Score = 115 bits (58), Expect = 1e-22 Identities = 124/146 (84%) Strand = Plus / Plus Query: 216 ggtttcaccggtgctgatcttcagaacttgatgaatgaggctgccatccttgccgctcgt 275 |||||||| ||||||||| | |||||| |||||||||| ||||| || ||||| ||| | Sbjct: 42638 ggtttcactggtgctgatttgcagaacctgatgaatgaagctgcgattcttgctgctaga 42697 Query: 276 cgtgatctgaaggagataagcaaggacgagatctctgacgctctggagaggatcattgcc 335 ||||| || ||||||||||||||||| || || ||||| ||||| |||||||||||||| Sbjct: 42698 cgtgagcttaaggagataagcaaggatgaaatatctgatgctcttgagaggatcattgct 42757 Query: 336 gggcctgagaagaagaatgcagttgt 361 || ||||| |||||||| || ||||| Sbjct: 42758 ggacctgaaaagaagaacgctgttgt 42783
>gb|AF332134.1| Medicago sativa FtsH protease (FtsH) mRNA, complete cds; chloroplast gene for chloroplast product Length = 2352 Score = 83.8 bits (42), Expect = 5e-13 Identities = 246/314 (78%) Strand = Plus / Plus Query: 141 atccttgaggttcactccagaggaaaggcattggcgaaggatgtggactttgataaggtt 200 |||||| |||| || || |||||||| ||| | || |||||||| |||||||| || || Sbjct: 1343 atccttcaggtgcattctagaggaaaagcacttgcaaaggatgttgactttgacaaaatt 1402 Query: 201 gccagaaggacacctggtttcaccggtgctgatcttcagaacttgatgaatgaggctgcc 260 ||||| || || || || ||||| || | |||||| ||||| ||||||| || || || Sbjct: 1403 gccaggagaaccccagggttcacaggagttgatctgcagaatctgatgaacgaagcagct 1462 Query: 261 atccttgccgctcgtcgtgatctgaaggagataagcaaggacgagatctctgacgctctg 320 || ||||| || | ||||| || || || ||||| || || ||||| |||| || || Sbjct: 1463 attcttgctgccaggcgtgacctcaaagaaataagtaaagatgagatagctgatgcgctt 1522 Query: 321 gagaggatcattgccgggcctgagaagaagaatgcagttgtttcagaacagaagaggaag 380 || ||||||||||| || || || ||||| ||||| ||||| |||||| |||||| ||| Sbjct: 1523 gaaaggatcattgctggaccagaaaagaaaaatgccgttgtctcagaagagaagaagaaa 1582 Query: 381 cttgtggcttaccatgaggctggacatgccctcgtcggtgccctgatgcctgaatatgac 440 | || || || ||||||||||| ||||| | || ||||| ||||||||||||||||| Sbjct: 1583 ttagtagcctatcatgaggctggccatgctttagtgggtgctttgatgcctgaatatgac 1642 Query: 441 cctgttgccaagat 454 ||||| |||||||| Sbjct: 1643 cctgtagccaagat 1656
>gb|CP000097.1| Synechococcus sp. CC9902, complete genome Length = 2234828 Score = 71.9 bits (36), Expect = 2e-09 Identities = 72/84 (85%) Strand = Plus / Minus Query: 384 gtggcttaccatgaggctggacatgccctcgtcggtgccctgatgcctgaatatgaccct 443 |||||||| || ||||| || ||||||||||||||||| ||||||||||| || ||||| Sbjct: 1951862 gtggcttatcacgaggcaggccatgccctcgtcggtgctctgatgcctgattacgacccc 1951803 Query: 444 gttgccaagatttccatcattcct 467 ||| |||||||| ||||||||| Sbjct: 1951802 gttcaaaagatttcgatcattcct 1951779
>gb|CP000110.1| Synechococcus sp. CC9605, complete genome Length = 2510659 Score = 61.9 bits (31), Expect = 2e-06 Identities = 61/71 (85%) Strand = Plus / Plus Query: 396 gaggctggacatgccctcgtcggtgccctgatgcctgaatatgaccctgttgccaagatt 455 |||||||| |||||||| || ||||||||||||||||| || ||||| ||| ||||| Sbjct: 305543 gaggctggccatgcccttgtgggtgccctgatgcctgactacgacccagttcagaagatc 305602 Query: 456 tccatcattcc 466 ||||||||||| Sbjct: 305603 tccatcattcc 305613
>gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome Length = 3304561 Score = 52.0 bits (26), Expect = 0.002 Identities = 59/70 (84%) Strand = Plus / Minus Query: 25 tcatcgtgctcgccgcgaccaacaggccggatgtgcttgactccgcgcttctgcggccag 84 |||||||| |||||||||||||| | || || ||||| || ||||||| |||||||| | Sbjct: 1984109 tcatcgtgatcgccgcgaccaaccgccccgacgtgctcgatcccgcgctgctgcggccgg 1984050 Query: 85 ggcggttcga 94 | |||||||| Sbjct: 1984049 gccggttcga 1984040
>gb|AE009302.1| Agrobacterium tumefaciens str. C58 linear chromosome, section 72 of 187 of the complete sequence Length = 10906 Score = 46.1 bits (23), Expect = 0.10 Identities = 59/71 (83%) Strand = Plus / Minus Query: 34 tcgccgcgaccaacaggccggatgtgcttgactccgcgcttctgcggccagggcggttcg 93 ||||||| |||||| | || ||||| |||||| ||||||||||||| || || || |||| Sbjct: 2702 tcgccgctaccaaccgtcctgatgttcttgaccccgcgcttctgcgtcccggccgtttcg 2643 Query: 94 atcggcaggtc 104 | || |||||| Sbjct: 2642 accgtcaggtc 2632
>gb|AE008312.1| Agrobacterium tumefaciens str. C58 linear chromosome, section 116 of 187 of the complete sequence Length = 11049 Score = 46.1 bits (23), Expect = 0.10 Identities = 59/71 (83%) Strand = Plus / Plus Query: 34 tcgccgcgaccaacaggccggatgtgcttgactccgcgcttctgcggccagggcggttcg 93 ||||||| |||||| | || ||||| |||||| ||||||||||||| || || || |||| Sbjct: 4241 tcgccgctaccaaccgtcctgatgttcttgaccccgcgcttctgcgtcccggccgtttcg 4300 Query: 94 atcggcaggtc 104 | || |||||| Sbjct: 4301 accgtcaggtc 4311
>ref|XM_782306.1| PREDICTED: Strongylocentrotus purpuratus similar to YME1-like 1 isoform 1 (LOC582354), mRNA Length = 2071 Score = 46.1 bits (23), Expect = 0.10 Identities = 38/43 (88%) Strand = Plus / Plus Query: 199 ttgccagaaggacacctggtttcaccggtgctgatcttcagaa 241 |||||||| ||||| ||||||||| || |||||||||||||| Sbjct: 620 ttgccagagggacagttggtttcacaggggctgatcttcagaa 662
>emb|BX572092.1| Prochlorococcus marinus MED4 complete genome; segment 3/5 Length = 348178 Score = 46.1 bits (23), Expect = 0.10 Identities = 32/35 (91%) Strand = Plus / Minus Query: 199 ttgccagaaggacacctggtttcaccggtgctgat 233 |||| ||||||||||||||||| ||||| |||||| Sbjct: 5936 ttgcaagaaggacacctggttttaccggagctgat 5902
>emb|BX569689.1| Synechococcus sp. WH8102 complete genome; segment 1/7 Length = 348764 Score = 46.1 bits (23), Expect = 0.10 Identities = 71/87 (81%) Strand = Plus / Plus Query: 222 accggtgctgatcttcagaacttgatgaatgaggctgccatccttgccgctcgtcgtgat 281 |||||||||||||| ||| || ||||||||||||||||||| || || ||||| || Sbjct: 303834 accggtgctgatctggccaacctgctgaatgaggctgccatcctggctgcccgtcgcgaa 303893 Query: 282 ctgaaggagataagcaaggacgagatc 308 |||| ||| | ||||| ||||||||| Sbjct: 303894 ctgaccgaggtcagcaacgacgagatc 303920
>dbj|AP008231.1| Synechococcus elongatus PCC 6301 DNA, complete genome Length = 2696255 Score = 46.1 bits (23), Expect = 0.10 Identities = 50/59 (84%) Strand = Plus / Minus Query: 384 gtggcttaccatgaggctggacatgccctcgtcggtgccctgatgcctgaatatgaccc 442 ||||||||||| || ||||| || ||| | ||||||||| |||||||||| || ||||| Sbjct: 1324762 gtggcttaccacgaagctggtcacgccttggtcggtgccttgatgcctgactacgaccc 1324704
>gb|CP000100.1| Synechococcus elongatus PCC 7942, complete genome Length = 2695903 Score = 46.1 bits (23), Expect = 0.10 Identities = 50/59 (84%) Strand = Plus / Plus Query: 384 gtggcttaccatgaggctggacatgccctcgtcggtgccctgatgcctgaatatgaccc 442 ||||||||||| || ||||| || ||| | ||||||||| |||||||||| || ||||| Sbjct: 296120 gtggcttaccacgaagctggtcacgccttggtcggtgccttgatgcctgactacgaccc 296178
>emb|BX572090.1| Prochlorococcus marinus MED4 complete genome; segment 1/5 Length = 349742 Score = 44.1 bits (22), Expect = 0.40 Identities = 46/54 (85%) Strand = Plus / Minus Query: 180 gatgtggactttgataaggttgccagaaggacacctggtttcaccggtgctgat 233 ||||| ||| ||||||||||||| ||||| || ||||| || || ||||||||| Sbjct: 220557 gatgtagaccttgataaggttgcgagaagaactcctgggtttacaggtgctgat 220504
>gb|AC002511.1| Homo sapiens chromosome 19 clone PC28130, complete sequence Length = 98713 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 380 gcttgtggcttaccatgaggc 400 ||||||||||||||||||||| Sbjct: 55731 gcttgtggcttaccatgaggc 55711
>gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome Length = 3345170 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 31 tgctcgccgcgaccaacaggc 51 ||||||||||||||||||||| Sbjct: 145980 tgctcgccgcgaccaacaggc 146000
>ref|XM_500490.1| Yarrowia lipolytica CLIB122, YALI0B04334g predicted mRNA Length = 3309 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 297 aaggacgagatctctgacgctctgg 321 |||||||||||| |||||||||||| Sbjct: 1717 aaggacgagatcgctgacgctctgg 1741
>dbj|BA000039.2| Thermosynechococcus elongatus BP-1 DNA, complete genome Length = 2593857 Score = 42.1 bits (21), Expect = 1.6 Identities = 36/41 (87%) Strand = Plus / Minus Query: 390 taccatgaggctggacatgccctcgtcggtgccctgatgcc 430 ||||||||||| || |||||||| || || ||||||||||| Sbjct: 111477 taccatgaggcgggtcatgcccttgtgggcgccctgatgcc 111437
>emb|CR382128.1| Yarrowia lipolytica chromosome B of strain CLIB122 of Yarrowia lipolytica Length = 3066374 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 297 aaggacgagatctctgacgctctgg 321 |||||||||||| |||||||||||| Sbjct: 581282 aaggacgagatcgctgacgctctgg 581306
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome Length = 3566135 Score = 42.1 bits (21), Expect = 1.6 Identities = 54/65 (83%) Strand = Plus / Minus Query: 36 gccgcgaccaacaggccggatgtgcttgactccgcgcttctgcggccagggcggttcgat 95 |||||||||||| |||| || ||||| ||| | ||| | || ||||| ||||||||||| Sbjct: 2726406 gccgcgaccaaccggcctgacgtgctggaccctgcggtcctccggccggggcggttcgac 2726347 Query: 96 cggca 100 ||||| Sbjct: 2726346 cggca 2726342
>ref|NM_115254.3| Arabidopsis thaliana binding / transporter AT3G53940 mRNA, complete cds Length = 1542 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 341 tgagaagaagaatgcagttg 360 |||||||||||||||||||| Sbjct: 1089 tgagaagaagaatgcagttg 1108
>gb|CP000108.1| Chlorobium chlorochromatii CaD3, complete genome Length = 2572079 Score = 40.1 bits (20), Expect = 6.3 Identities = 38/44 (86%) Strand = Plus / Plus Query: 54 gatgtgcttgactccgcgcttctgcggccagggcggttcgatcg 97 ||||||||||| || |||||| |||| |||||||| || ||||| Sbjct: 9289 gatgtgcttgattcggcgcttttgcgtccagggcgttttgatcg 9332
>gb|CP000141.1| Carboxydothermus hydrogenoformans Z-2901, complete genome Length = 2401520 Score = 40.1 bits (20), Expect = 6.3 Identities = 35/40 (87%) Strand = Plus / Plus Query: 380 gcttgtggcttaccatgaggctggacatgccctcgtcggt 419 |||||| |||||||||||||| || |||||| | |||||| Sbjct: 181273 gcttgtagcttaccatgaggcgggccatgccatggtcggt 181312
>gb|CP000127.1| Nitrosococcus oceani ATCC 19707, complete genome Length = 3481691 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 378 aagcttgtggcttaccatga 397 |||||||||||||||||||| Sbjct: 301864 aagcttgtggcttaccatga 301883
>gb|AC091324.10| Mus musculus chromosome 7, clone RP23-7G1, complete sequence Length = 225556 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 145 ttgaggttcactccagagga 164 |||||||||||||||||||| Sbjct: 84075 ttgaggttcactccagagga 84094
>gb|BT011963.1| Arabidopsis thaliana At3g53940 mRNA sequence Length = 1095 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 341 tgagaagaagaatgcagttg 360 |||||||||||||||||||| Sbjct: 881 tgagaagaagaatgcagttg 900
>emb|AL591788.1|SME591788 Sinorhizobium meliloti 1021 complete chromosome; segment 7/12 Length = 306250 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 394 atgaggctggacatgccctc 413 |||||||||||||||||||| Sbjct: 54117 atgaggctggacatgccctc 54136
>ref|XM_499951.1| Yarrowia lipolytica CLIB122, YALI0A10615g predicted mRNA Length = 2403 Score = 40.1 bits (20), Expect = 6.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 383 tgtggcttaccatgaggctggacatgcc 410 |||||| |||||||||||||| |||||| Sbjct: 1773 tgtggcctaccatgaggctggccatgcc 1800
>gb|AF259761.1| Ovis aries microsatellite MNS-89 sequence Length = 995 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 419 tgccctgatgcctgaatatg 438 |||||||||||||||||||| Sbjct: 798 tgccctgatgcctgaatatg 817
>gb|AE008912.1| Salmonella typhimurium LT2, section 216 of 220 of the complete genome Length = 20216 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 420 gccctgatgcctgaatatga 439 |||||||||||||||||||| Sbjct: 4815 gccctgatgcctgaatatga 4796
>emb|AL627284.1| Salmonella enterica serovar Typhi (Salmonella typhi) strain CT18, complete chromosome; segment 20/20 Length = 88037 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 420 gccctgatgcctgaatatga 439 |||||||||||||||||||| Sbjct: 3877 gccctgatgcctgaatatga 3858
>emb|AL132960.2|ATF5K20 Arabidopsis thaliana DNA chromosome 3, BAC clone F5K20 Length = 119407 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 341 tgagaagaagaatgcagttg 360 |||||||||||||||||||| Sbjct: 73981 tgagaagaagaatgcagttg 73962
>gb|AF236051.1| California sea lion herpesvirus terminase gene, partial cds Length = 448 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 371 gaagaggaagcttgtggctt 390 |||||||||||||||||||| Sbjct: 109 gaagaggaagcttgtggctt 90
>gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome Length = 4712337 Score = 40.1 bits (20), Expect = 6.3 Identities = 38/44 (86%) Strand = Plus / Plus Query: 60 cttgactccgcgcttctgcggccagggcggttcgatcggcaggt 103 |||||||||||| | |||||||| || || ||||| |||||||| Sbjct: 2168295 cttgactccgcgttgctgcggccgggccgcttcgaccggcaggt 2168338
>gb|AY093262.1| Arabidopsis thaliana putative protein (F5K20.24) mRNA, complete cds Length = 1169 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 341 tgagaagaagaatgcagttg 360 |||||||||||||||||||| Sbjct: 884 tgagaagaagaatgcagttg 903
>gb|AY062478.1| Arabidopsis thaliana putative protein (F5K20.24) mRNA, complete cds Length = 1397 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 341 tgagaagaagaatgcagttg 360 |||||||||||||||||||| Sbjct: 1089 tgagaagaagaatgcagttg 1108
>gb|AF193618.1|AF193618 California sea lion herpesvirus terminase gene, partial cds Length = 375 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 371 gaagaggaagcttgtggctt 390 |||||||||||||||||||| Sbjct: 36 gaagaggaagcttgtggctt 17
>emb|BX822250.1|CNS0A70P Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB23ZB02 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1400 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 341 tgagaagaagaatgcagttg 360 |||||||||||||||||||| Sbjct: 1044 tgagaagaagaatgcagttg 1063
>emb|BX824565.1|CNS0A4VO Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH56ZE10 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1499 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 341 tgagaagaagaatgcagttg 360 |||||||||||||||||||| Sbjct: 1056 tgagaagaagaatgcagttg 1075
>gb|AC068279.6| Homo sapiens BAC clone RP11-153P14 from 2, complete sequence Length = 135351 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 443 tgttgccaagatttccatca 462 |||||||||||||||||||| Sbjct: 6697 tgttgccaagatttccatca 6678
>gb|AE004548.1| Pseudomonas aeruginosa PAO1, section 109 of 529 of the complete genome Length = 10054 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 25 tcatcgtgctcgccgcgacc 44 |||||||||||||||||||| Sbjct: 8703 tcatcgtgctcgccgcgacc 8722
>gb|CP000157.1| Erythrobacter litoralis HTCC2594, complete genome Length = 3052398 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 172 tggcgaaggatgtggacttt 191 |||||||||||||||||||| Sbjct: 1272758 tggcgaaggatgtggacttt 1272777
>ref|XM_345541.2| PREDICTED: Rattus norvegicus similar to Ubiquitin carboxyl-terminal hydrolase isozyme L3 (UCH-L3) (Ubiquitin thiolesterase L3) (LOC366382), mRNA Length = 687 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 362 ttcagaacagaagaggaagc 381 |||||||||||||||||||| Sbjct: 199 ttcagaacagaagaggaagc 218
>gb|AC017002.4| Homo sapiens BAC clone RP11-68E19 from 2, complete sequence Length = 205662 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 443 tgttgccaagatttccatca 462 |||||||||||||||||||| Sbjct: 109069 tgttgccaagatttccatca 109088
>dbj|BA000022.2| Synechocystis sp. PCC 6803 DNA, complete genome Length = 3573470 Score = 40.1 bits (20), Expect = 6.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 76 tgcggccagggcggttcgatcggcaggt 103 |||||||||| ||||||||||| ||||| Sbjct: 697074 tgcggccaggacggttcgatcgccaggt 697101 Score = 40.1 bits (20), Expect = 6.3 Identities = 47/56 (83%) Strand = Plus / Plus Query: 384 gtggcttaccatgaggctggacatgccctcgtcggtgccctgatgcctgaatatga 439 |||||||||||||| ||||| || ||| | || ||||| |||||||||| ||||| Sbjct: 472337 gtggcttaccatgaagctggccacgccttggtgggtgctttgatgcctgattatga 472392
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence Length = 3716413 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 69 gcgcttctgcggccagggcg 88 |||||||||||||||||||| Sbjct: 94710 gcgcttctgcggccagggcg 94729
>gb|AE014613.1| Salmonella enterica subsp. enterica serovar Typhi Ty2, complete genome Length = 4791961 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 420 gccctgatgcctgaatatga 439 |||||||||||||||||||| Sbjct: 4707801 gccctgatgcctgaatatga 4707782
>gb|AE017220.1| Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67, complete genome Length = 4755700 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 420 gccctgatgcctgaatatga 439 |||||||||||||||||||| Sbjct: 4668541 gccctgatgcctgaatatga 4668522
>emb|CR382127.1| Yarrowia lipolytica chromosome A of strain CLIB122 of Yarrowia lipolytica Length = 2303261 Score = 40.1 bits (20), Expect = 6.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 383 tgtggcttaccatgaggctggacatgcc 410 |||||| |||||||||||||| |||||| Sbjct: 1102899 tgtggcctaccatgaggctggccatgcc 1102926 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,562,127 Number of Sequences: 3902068 Number of extensions: 3562127 Number of successful extensions: 64055 Number of sequences better than 10.0: 67 Number of HSP's better than 10.0 without gapping: 67 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 63624 Number of HSP's gapped (non-prelim): 427 length of query: 467 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 445 effective length of database: 17,147,199,772 effective search space: 7630503898540 effective search space used: 7630503898540 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
