ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | baal8l17 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY188797.1| Oryza sativa (indica cultivar-group) sedoheptulose-1,7-bisphosphatase precursor, mRNA, complete cds; nuclear gene for chloroplast product Length = 1566 Score = 525 bits (265), Expect = e-146 Identities = 471/537 (87%), Gaps = 2/537 (0%) Strand = Plus / Plus Query: 12 cggacaagtaacctcattaggctgctgattctgcatgggggaggcgatgaggacgatcgc 71 |||||||| |||||||| |||||||| || |||||||||||||||||||||||||||| | Sbjct: 410 cggacaag-aacctcatcaggctgctcat-ctgcatgggggaggcgatgaggacgatctc 467 Query: 72 cttcaaggtcaggacggcgtcctgcggcggcaccgcctgcgtcaactccttcggcgacga 131 |||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 468 gttcaaggtcaggacggcgtcgtgcggcggcaccgcctgcgtcaactccttcggtgacga 527 Query: 132 gcagctcgccgtcgacatgctcgccgacaagctcctattcgaggcgctggagtactccca 191 ||||||||||||||| |||||||||||||||||||| |||||||| ||||| ||||| || Sbjct: 528 gcagctcgccgtcgatatgctcgccgacaagctcctcttcgaggctctggaatactctca 587 Query: 192 tgtgtgcaagtacgcgtgctctgaggaagtccccgagctgcaggacatgggtggccccgt 251 ||| |||||||| |||||||| ||||||||||| |||||||| ||||||||||| || || Sbjct: 588 tgtctgcaagtatgcgtgctccgaggaagtcccggagctgcaagacatgggtggaccagt 647 Query: 252 cgaaggcggattcagtgtggcgttcgatccccttgatggttccagcatcgtggacaccaa 311 ||| || || |||||||| || ||||| || |||||||| |||||||| || ||||| || Sbjct: 648 cgatggtggtttcagtgtagcattcgaccctcttgatgggtccagcattgtcgacacgaa 707 Query: 312 cttcaccgtgggaaccatcttcggcgtgtggcccggcgacaagctgacgggcgtcaccgg 371 |||||| || |||||||| || || || ||||| || ||||||||||| ||||||||||| Sbjct: 708 cttcacagttggaaccatatttggtgtctggcctggtgacaagctgacaggcgtcaccgg 767 Query: 372 cggagaccaggttgctgccgccatgggcatctacggccctcgcaccaccttcgtcgtcgc 431 |||||||| |||||||| |||||||||||||| ||||||||||| || | | | |||| Sbjct: 768 tggagaccaagttgctgctgccatgggcatctatggccctcgcactacttacattatcgc 827 Query: 432 cctcaaggactgccccgggacgcatgaattccttcttctcgacgaaggtaaatggcagca 491 ||||| || || || || || ||||||||||||||||| || ||||| ||||||||||| Sbjct: 828 tctcaaagattgtcctggaactcatgaattccttcttcttgatgaaggaaaatggcagca 887 Query: 492 tgtcaaggacaccacaagcattggagaagggaagatgttctcccctggcaatctgag 548 ||||||||||||||||| ||||||||| ||||| |||||||| ||||| || ||||| Sbjct: 888 tgtcaaggacaccacaaccattggagaggggaaaatgttctctcctggtaacctgag 944
>dbj|AK119209.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-041-E03, full insert sequence Length = 1605 Score = 523 bits (264), Expect = e-145 Identities = 463/528 (87%), Gaps = 1/528 (0%) Strand = Plus / Plus Query: 21 aacctcattaggctgctgattctgcatgggggaggcgatgaggacgatcgccttcaaggt 80 |||||||| |||||||| || |||||||||||||||||||||||||||| | |||||||| Sbjct: 484 aacctcatcaggctgctcat-ctgcatgggggaggcgatgaggacgatctcgttcaaggt 542 Query: 81 caggacggcgtcctgcggcggcaccgcctgcgtcaactccttcggcgacgagcagctcgc 140 |||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 543 caggacggcgtcgtgcggcggcaccgcctgcgtcaactccttcggtgacgagcagctcgc 602 Query: 141 cgtcgacatgctcgccgacaagctcctattcgaggcgctggagtactcccatgtgtgcaa 200 |||||| |||||||||||||||||||| |||||||| ||||| ||||| ||||| ||||| Sbjct: 603 cgtcgatatgctcgccgacaagctcctcttcgaggctctggaatactctcatgtctgcaa 662 Query: 201 gtacgcgtgctctgaggaagtccccgagctgcaggacatgggtggccccgtcgaaggcgg 260 ||| |||||||| ||||||||||| |||||||| ||||||||||| || ||||| || || Sbjct: 663 gtatgcgtgctccgaggaagtcccggagctgcaagacatgggtggaccagtcgatggtgg 722 Query: 261 attcagtgtggcgttcgatccccttgatggttccagcatcgtggacaccaacttcaccgt 320 |||||||| || ||||| || |||||||| |||||||| || ||||| |||||||| || Sbjct: 723 tttcagtgtagcattcgaccctcttgatgggtccagcattgtcgacacgaacttcacagt 782 Query: 321 gggaaccatcttcggcgtgtggcccggcgacaagctgacgggcgtcaccggcggagacca 380 |||||||| || || || ||||| || ||||||||||| ||||||||||| |||||||| Sbjct: 783 tggaaccatatttggtgtctggcctggtgacaagctgacaggcgtcaccggtggagacca 842 Query: 381 ggttgctgccgccatgggcatctacggccctcgcaccaccttcgtcgtcgccctcaagga 440 |||||||| |||||||||||||| ||||||||||| || | | | |||| ||||| || Sbjct: 843 agttgctgctgccatgggcatctatggccctcgcactacttacattatcgctctcaaaga 902 Query: 441 ctgccccgggacgcatgaattccttcttctcgacgaaggtaaatggcagcatgtcaagga 500 || || || || ||||||||||||||||| || ||||| |||||||||||||||||||| Sbjct: 903 ttgtcctggaactcatgaattccttcttcttgatgaaggaaaatggcagcatgtcaagga 962 Query: 501 caccacaagcattggagaagggaagatgttctcccctggcaatctgag 548 |||||||| ||||||||| ||||| |||||||| ||||| || ||||| Sbjct: 963 caccacaaccattggagaggggaaaatgttctctcctggtaacctgag 1010
>dbj|AK062081.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-044-F10, full insert sequence Length = 1454 Score = 523 bits (264), Expect = e-145 Identities = 463/528 (87%), Gaps = 1/528 (0%) Strand = Plus / Plus Query: 21 aacctcattaggctgctgattctgcatgggggaggcgatgaggacgatcgccttcaaggt 80 |||||||| |||||||| || |||||||||||||||||||||||||||| | |||||||| Sbjct: 396 aacctcatcaggctgctcat-ctgcatgggggaggcgatgaggacgatctcgttcaaggt 454 Query: 81 caggacggcgtcctgcggcggcaccgcctgcgtcaactccttcggcgacgagcagctcgc 140 |||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 455 caggacggcgtcgtgcggcggcaccgcctgcgtcaactccttcggtgacgagcagctcgc 514 Query: 141 cgtcgacatgctcgccgacaagctcctattcgaggcgctggagtactcccatgtgtgcaa 200 |||||| |||||||||||||||||||| |||||||| ||||| ||||| ||||| ||||| Sbjct: 515 cgtcgatatgctcgccgacaagctcctcttcgaggctctggaatactctcatgtctgcaa 574 Query: 201 gtacgcgtgctctgaggaagtccccgagctgcaggacatgggtggccccgtcgaaggcgg 260 ||| |||||||| ||||||||||| |||||||| ||||||||||| || ||||| || || Sbjct: 575 gtatgcgtgctccgaggaagtcccggagctgcaagacatgggtggaccagtcgatggtgg 634 Query: 261 attcagtgtggcgttcgatccccttgatggttccagcatcgtggacaccaacttcaccgt 320 |||||||| || ||||| || |||||||| |||||||| || ||||| |||||||| || Sbjct: 635 tttcagtgtagcattcgaccctcttgatgggtccagcattgtcgacacgaacttcacagt 694 Query: 321 gggaaccatcttcggcgtgtggcccggcgacaagctgacgggcgtcaccggcggagacca 380 |||||||| || || || ||||| || ||||||||||| ||||||||||| |||||||| Sbjct: 695 tggaaccatatttggtgtctggcctggtgacaagctgacaggcgtcaccggtggagacca 754 Query: 381 ggttgctgccgccatgggcatctacggccctcgcaccaccttcgtcgtcgccctcaagga 440 |||||||| |||||||||||||| ||||||||||| || | | | |||| ||||| || Sbjct: 755 agttgctgctgccatgggcatctatggccctcgcactacttacattatcgctctcaaaga 814 Query: 441 ctgccccgggacgcatgaattccttcttctcgacgaaggtaaatggcagcatgtcaagga 500 || || || || ||||||||||||||||| || ||||| |||||||||||||||||||| Sbjct: 815 ttgtcctggaactcatgaattccttcttcttgatgaaggaaaatggcagcatgtcaagga 874 Query: 501 caccacaagcattggagaagggaagatgttctcccctggcaatctgag 548 |||||||| ||||||||| ||||| |||||||| ||||| || ||||| Sbjct: 875 caccacaaccattggagaggggaaaatgttctctcctggtaacctgag 922
>ref|XM_475043.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1179 Score = 515 bits (260), Expect = e-143 Identities = 462/528 (87%), Gaps = 1/528 (0%) Strand = Plus / Plus Query: 21 aacctcattaggctgctgattctgcatgggggaggcgatgaggacgatcgccttcaaggt 80 |||||||| |||||||| || |||||||||||||||||||||||||||| | |||||||| Sbjct: 268 aacctcatcaggctgctcat-ctgcatgggggaggcgatgaggacgatctcgttcaaggt 326 Query: 81 caggacggcgtcctgcggcggcaccgcctgcgtcaactccttcggcgacgagcagctcgc 140 |||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 327 caggacggcgtcgtgcggcggcaccgcctgcgtcaactccttcggtgacgagcagctcgc 386 Query: 141 cgtcgacatgctcgccgacaagctcctattcgaggcgctggagtactcccatgtgtgcaa 200 |||||| |||||||||||||||||||| |||||||| ||||| ||||| ||||| ||||| Sbjct: 387 cgtcgatatgctcgccgacaagctcctcttcgaggctctggaatactctcatgtctgcaa 446 Query: 201 gtacgcgtgctctgaggaagtccccgagctgcaggacatgggtggccccgtcgaaggcgg 260 ||| |||||||| ||||||||||| |||||||| ||||||||||| || ||||| || || Sbjct: 447 gtatgcgtgctccgaggaagtcccggagctgcaagacatgggtggaccagtcgatggtgg 506 Query: 261 attcagtgtggcgttcgatccccttgatggttccagcatcgtggacaccaacttcaccgt 320 |||||||| || ||||| || |||||||| |||||||| || ||||| |||||||| || Sbjct: 507 tttcagtgtagcattcgaccctcttgatgggtccagcattgtcgacacgaacttcacagt 566 Query: 321 gggaaccatcttcggcgtgtggcccggcgacaagctgacgggcgtcaccggcggagacca 380 |||||||| || || || ||||| || ||||||||||| ||||||||||| |||||||| Sbjct: 567 tggaaccatatttggtgtctggcctggtgacaagctgacaggcgtcaccggtggagacca 626 Query: 381 ggttgctgccgccatgggcatctacggccctcgcaccaccttcgtcgtcgccctcaagga 440 |||||||| |||||||||||||| ||||||||||| || | | | |||| ||||| || Sbjct: 627 agttgctgctgccatgggcatctatggccctcgcactacttacattatcgctctcaaaga 686 Query: 441 ctgccccgggacgcatgaattccttcttctcgacgaaggtaaatggcagcatgtcaagga 500 || || || || ||||||||||||||||| || ||||| ||||||||||||||| |||| Sbjct: 687 ttgtcctggaactcatgaattccttcttcttgatgaaggaaaatggcagcatgtccagga 746 Query: 501 caccacaagcattggagaagggaagatgttctcccctggcaatctgag 548 |||||||| ||||||||| ||||| |||||||| ||||| || ||||| Sbjct: 747 caccacaaccattggagaggggaaaatgttctctcctggtaacctgag 794
>dbj|AK065773.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013039M24, full insert sequence Length = 1541 Score = 515 bits (260), Expect = e-143 Identities = 462/528 (87%), Gaps = 1/528 (0%) Strand = Plus / Plus Query: 21 aacctcattaggctgctgattctgcatgggggaggcgatgaggacgatcgccttcaaggt 80 |||||||| |||||||| || |||||||||||||||||||||||||||| | |||||||| Sbjct: 329 aacctcatcaggctgctcat-ctgcatgggggaggcgatgaggacgatctcgttcaaggt 387 Query: 81 caggacggcgtcctgcggcggcaccgcctgcgtcaactccttcggcgacgagcagctcgc 140 |||||||||||| |||||||||||||| ||||||||||||||||| |||||||||||||| Sbjct: 388 caggacggcgtcgtgcggcggcaccgcatgcgtcaactccttcggtgacgagcagctcgc 447 Query: 141 cgtcgacatgctcgccgacaagctcctattcgaggcgctggagtactcccatgtgtgcaa 200 |||||| |||||||||||||||||||| |||||||| ||||| ||||| ||||| ||||| Sbjct: 448 cgtcgatatgctcgccgacaagctcctcttcgaggctctggaatactctcatgtctgcaa 507 Query: 201 gtacgcgtgctctgaggaagtccccgagctgcaggacatgggtggccccgtcgaaggcgg 260 ||| |||||||| ||||||||||| |||||||| ||||||||||| || ||||| || || Sbjct: 508 gtatgcgtgctccgaggaagtcccggagctgcaagacatgggtggaccagtcgatggtgg 567 Query: 261 attcagtgtggcgttcgatccccttgatggttccagcatcgtggacaccaacttcaccgt 320 |||||||| || ||||| || |||||||| |||||||| || ||||| |||||||| || Sbjct: 568 tttcagtgtagcattcgaccctcttgatgggtccagcattgtcgacacgaacttcacagt 627 Query: 321 gggaaccatcttcggcgtgtggcccggcgacaagctgacgggcgtcaccggcggagacca 380 |||||||| || || || ||||| || ||||||||||| ||||||||||| |||||||| Sbjct: 628 tggaaccatatttggtgtctggcctggtgacaagctgacaggcgtcaccggtggagacca 687 Query: 381 ggttgctgccgccatgggcatctacggccctcgcaccaccttcgtcgtcgccctcaagga 440 |||||||| |||||||||||||| ||||||||||| || | | | |||| ||||| || Sbjct: 688 agttgctgctgccatgggcatctatggccctcgcactacttacattatcgctctcaaaga 747 Query: 441 ctgccccgggacgcatgaattccttcttctcgacgaaggtaaatggcagcatgtcaagga 500 || || || || ||||||||||||||||| || ||||| |||||||||||||||||||| Sbjct: 748 ttgtcctggaactcatgaattccttcttcttgatgaaggaaaatggcagcatgtcaagga 807 Query: 501 caccacaagcattggagaagggaagatgttctcccctggcaatctgag 548 |||||||| ||||||||| ||||| |||||||| ||||| || ||||| Sbjct: 808 caccacaaccattggagaggggaaaatgttctctcctggtaacctgag 855
>emb|X65540.1|TASH17BP T.aestivum gene for sedoheptulose-1,7-bisphoshatase Length = 3143 Score = 361 bits (182), Expect = 2e-96 Identities = 215/226 (95%) Strand = Plus / Plus Query: 255 aggcggattcagtgtggcgttcgatccccttgatggttccagcatcgtggacaccaactt 314 |||||||||||||||||||||||| |||||||| || ||||||||||||||||||||||| Sbjct: 1255 aggcggattcagtgtggcgttcgacccccttgacggctccagcatcgtggacaccaactt 1314 Query: 315 caccgtgggaaccatcttcggcgtgtggcccggcgacaagctgacgggcgtcaccggcgg 374 |||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||| Sbjct: 1315 caccgtgggaaccatcttcggcgtctggcccggcgacaagctgaccggcgtcaccggcgg 1374 Query: 375 agaccaggttgctgccgccatgggcatctacggccctcgcaccaccttcgtcgtcgccct 434 |||||||||||||||||||||||||||||||||||||||||||||||||| || ||||| Sbjct: 1375 tgaccaggttgctgccgccatgggcatctacggccctcgcaccaccttcgtagttgccct 1434 Query: 435 caaggactgccccgggacgcatgaattccttcttctcgacgaaggt 480 |||||||||||||||||| || ||||||||||| |||||||||||| Sbjct: 1435 caaggactgccccgggacacacgaattccttctcctcgacgaaggt 1480 Score = 254 bits (128), Expect = 3e-64 Identities = 157/164 (95%), Gaps = 2/164 (1%) Strand = Plus / Plus Query: 12 cggacaagtaacctcattaggctgctgattctgcatgggggaggcgatgaggacgatcgc 71 |||||||| |||||||| ||||||||||| |||||||||||||||||||||||||||||| Sbjct: 470 cggacaag-aacctcatcaggctgctgat-ctgcatgggggaggcgatgaggacgatcgc 527 Query: 72 cttcaaggtcaggacggcgtcctgcggcggcaccgcctgcgtcaactccttcggcgacga 131 |||||||||| ||||||| |||||||||||||| |||||||||||||||||||||||||| Sbjct: 528 cttcaaggtccggacggcctcctgcggcggcacggcctgcgtcaactccttcggcgacga 587 Query: 132 gcagctcgccgtcgacatgctcgccgacaagctcctattcgagg 175 |||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 588 gcagctcgccgtcgacatgctcgccgacaagctcctcttcgagg 631 Score = 153 bits (77), Expect = 7e-34 Identities = 83/85 (97%) Strand = Plus / Plus Query: 173 aggcgctggagtactcccatgtgtgcaagtacgcgtgctctgaggaagtccccgagctgc 232 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 717 aggcgttggagtactcccatgtgtgcaagtacgcgtgctctgaggaagtccccgagctgc 776 Query: 233 aggacatgggtggccccgtcgaagg 257 |||||||||||||||| |||||||| Sbjct: 777 aggacatgggtggcccggtcgaagg 801 Score = 127 bits (64), Expect = 4e-26 Identities = 70/72 (97%) Strand = Plus / Plus Query: 477 aggtaaatggcagcatgtcaaggacaccacaagcattggagaagggaagatgttctcccc 536 |||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||| Sbjct: 1571 aggtaaatggcagcatgtcaaggacaccacgagcatcggagaagggaagatgttctcccc 1630 Query: 537 tggcaatctgag 548 |||||||||||| Sbjct: 1631 tggcaatctgag 1642
>gb|AY105080.1| Zea mays PCO078556 mRNA sequence Length = 817 Score = 246 bits (124), Expect = 6e-62 Identities = 198/223 (88%) Strand = Plus / Plus Query: 326 ccatcttcggcgtgtggcccggcgacaagctgacgggcgtcaccggcggagaccaggttg 385 |||||||||| || |||||||||||||||||||| || || ||||| || |||||||| | Sbjct: 13 ccatcttcggagtctggcccggcgacaagctgaccggagtgaccggnggcgaccaggtcg 72 Query: 386 ctgccgccatgggcatctacggccctcgcaccaccttcgtcgtcgccctcaaggactgcc 445 ||||||| ||||||||||||||||||||||| |||| | | |||||||||||||| |||| Sbjct: 73 ctgccgcgatgggcatctacggccctcgcacgacctacattgtcgccctcaaggattgcc 132 Query: 446 ccgggacgcatgaattccttcttctcgacgaaggtaaatggcagcatgtcaaggacacca 505 | |||||||| || ||||| || |||||||||||||||||||||||||| |||||||||| Sbjct: 133 ctgggacgcacgagttcctcctcctcgacgaaggtaaatggcagcatgtgaaggacacca 192 Query: 506 caagcattggagaagggaagatgttctcccctggcaatctgag 548 | | |||||| ||||||||||||||||| ||||| |||||||| Sbjct: 193 cgaccattggggaagggaagatgttctctcctggtaatctgag 235
>gb|AY188798.1| Oryza sativa (indica cultivar-group) sedoheptulose-1,7-bisphosphatase precursor, gene, complete cds; nuclear gene for chloroplast product Length = 2594 Score = 230 bits (116), Expect = 4e-57 Identities = 154/164 (93%), Gaps = 2/164 (1%) Strand = Plus / Plus Query: 12 cggacaagtaacctcattaggctgctgattctgcatgggggaggcgatgaggacgatcgc 71 |||||||| |||||||| |||||||| || |||||||||||||||||||||||||||| | Sbjct: 603 cggacaag-aacctcatcaggctgctcat-ctgcatgggggaggcgatgaggacgatctc 660 Query: 72 cttcaaggtcaggacggcgtcctgcggcggcaccgcctgcgtcaactccttcggcgacga 131 |||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 661 gttcaaggtcaggacggcgtcgtgcggcggcaccgcctgcgtcaactccttcggtgacga 720 Query: 132 gcagctcgccgtcgacatgctcgccgacaagctcctattcgagg 175 ||||||||||||||| |||||||||||||||||||| ||||||| Sbjct: 721 gcagctcgccgtcgatatgctcgccgacaagctcctcttcgagg 764 Score = 149 bits (75), Expect = 1e-32 Identities = 183/219 (83%) Strand = Plus / Plus Query: 262 ttcagtgtggcgttcgatccccttgatggttccagcatcgtggacaccaacttcaccgtg 321 |||||||| || ||||| || |||||||| |||||||| || ||||| |||||||| || Sbjct: 1267 ttcagtgtagcattcgaccctcttgatgggtccagcattgtcgacacgaacttcacagtt 1326 Query: 322 ggaaccatcttcggcgtgtggcccggcgacaagctgacgggcgtcaccggcggagaccag 381 |||||||| || || || ||||| || ||||||||||| ||||||||||| |||||||| Sbjct: 1327 ggaaccatatttggtgtctggcctggtgacaagctgacaggcgtcaccggtggagaccaa 1386 Query: 382 gttgctgccgccatgggcatctacggccctcgcaccaccttcgtcgtcgccctcaaggac 441 |||||||| |||||||||||||| ||||||||||| || | | | |||| ||||| || Sbjct: 1387 gttgctgctgccatgggcatctatggccctcgcactacttacattatcgctctcaaagat 1446 Query: 442 tgccccgggacgcatgaattccttcttctcgacgaaggt 480 || || || || ||||||||||||||||| || |||||| Sbjct: 1447 tgtcctggaactcatgaattccttcttcttgatgaaggt 1485 Score = 87.7 bits (44), Expect = 4e-14 Identities = 62/68 (91%) Strand = Plus / Plus Query: 481 aaatggcagcatgtcaaggacaccacaagcattggagaagggaagatgttctcccctggc 540 |||||||||||||||||||||||||||| ||||||||| ||||| |||||||| ||||| Sbjct: 1572 aaatggcagcatgtcaaggacaccacaaccattggagaggggaaaatgttctctcctggt 1631 Query: 541 aatctgag 548 || ||||| Sbjct: 1632 aacctgag 1639 Score = 83.8 bits (42), Expect = 6e-13 Identities = 72/82 (87%) Strand = Plus / Plus Query: 173 aggcgctggagtactcccatgtgtgcaagtacgcgtgctctgaggaagtccccgagctgc 232 |||| ||||| ||||| ||||| |||||||| |||||||| ||||||||||| ||||||| Sbjct: 877 aggctctggaatactctcatgtctgcaagtatgcgtgctccgaggaagtcccggagctgc 936 Query: 233 aggacatgggtggccccgtcga 254 | ||||||||||| || ||||| Sbjct: 937 aagacatgggtggaccagtcga 958
>emb|AL731605.3|OSJN00246 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0042F21, complete sequence Length = 167113 Score = 228 bits (115), Expect = 2e-56 Identities = 146/155 (94%), Gaps = 1/155 (0%) Strand = Plus / Minus Query: 21 aacctcattaggctgctgattctgcatgggggaggcgatgaggacgatcgccttcaaggt 80 |||||||| |||||||| || |||||||||||||||||||||||||||| | |||||||| Sbjct: 119915 aacctcatcaggctgctcat-ctgcatgggggaggcgatgaggacgatctcgttcaaggt 119857 Query: 81 caggacggcgtcctgcggcggcaccgcctgcgtcaactccttcggcgacgagcagctcgc 140 |||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 119856 caggacggcgtcgtgcggcggcaccgcctgcgtcaactccttcggtgacgagcagctcgc 119797 Query: 141 cgtcgacatgctcgccgacaagctcctattcgagg 175 |||||| |||||||||||||||||||| ||||||| Sbjct: 119796 cgtcgatatgctcgccgacaagctcctcttcgagg 119762 Score = 149 bits (75), Expect = 1e-32 Identities = 183/219 (83%) Strand = Plus / Minus Query: 262 ttcagtgtggcgttcgatccccttgatggttccagcatcgtggacaccaacttcaccgtg 321 |||||||| || ||||| || |||||||| |||||||| || ||||| |||||||| || Sbjct: 119259 ttcagtgtagcattcgaccctcttgatgggtccagcattgtcgacacgaacttcacagtt 119200 Query: 322 ggaaccatcttcggcgtgtggcccggcgacaagctgacgggcgtcaccggcggagaccag 381 |||||||| || || || ||||| || ||||||||||| ||||||||||| |||||||| Sbjct: 119199 ggaaccatatttggtgtctggcctggtgacaagctgacaggcgtcaccggtggagaccaa 119140 Query: 382 gttgctgccgccatgggcatctacggccctcgcaccaccttcgtcgtcgccctcaaggac 441 |||||||| |||||||||||||| ||||||||||| || | | | |||| ||||| || Sbjct: 119139 gttgctgctgccatgggcatctatggccctcgcactacttacattatcgctctcaaagat 119080 Query: 442 tgccccgggacgcatgaattccttcttctcgacgaaggt 480 || || || || ||||||||||||||||| || |||||| Sbjct: 119079 tgtcctggaactcatgaattccttcttcttgatgaaggt 119041 Score = 83.8 bits (42), Expect = 6e-13 Identities = 72/82 (87%) Strand = Plus / Minus Query: 173 aggcgctggagtactcccatgtgtgcaagtacgcgtgctctgaggaagtccccgagctgc 232 |||| ||||| ||||| ||||| |||||||| |||||||| ||||||||||| ||||||| Sbjct: 119649 aggctctggaatactctcatgtctgcaagtatgcgtgctccgaggaagtcccggagctgc 119590 Query: 233 aggacatgggtggccccgtcga 254 | ||||||||||| || ||||| Sbjct: 119589 aagacatgggtggaccagtcga 119568 Score = 79.8 bits (40), Expect = 9e-12 Identities = 61/68 (89%) Strand = Plus / Minus Query: 481 aaatggcagcatgtcaaggacaccacaagcattggagaagggaagatgttctcccctggc 540 ||||||||||||||| |||||||||||| ||||||||| ||||| |||||||| ||||| Sbjct: 118954 aaatggcagcatgtccaggacaccacaaccattggagaggggaaaatgttctctcctggt 118895 Query: 541 aatctgag 548 || ||||| Sbjct: 118894 aacctgag 118887
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 228 bits (115), Expect = 2e-56 Identities = 146/155 (94%), Gaps = 1/155 (0%) Strand = Plus / Minus Query: 21 aacctcattaggctgctgattctgcatgggggaggcgatgaggacgatcgccttcaaggt 80 |||||||| |||||||| || |||||||||||||||||||||||||||| | |||||||| Sbjct: 9035181 aacctcatcaggctgctcat-ctgcatgggggaggcgatgaggacgatctcgttcaaggt 9035123 Query: 81 caggacggcgtcctgcggcggcaccgcctgcgtcaactccttcggcgacgagcagctcgc 140 |||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 9035122 caggacggcgtcgtgcggcggcaccgcctgcgtcaactccttcggtgacgagcagctcgc 9035063 Query: 141 cgtcgacatgctcgccgacaagctcctattcgagg 175 |||||| |||||||||||||||||||| ||||||| Sbjct: 9035062 cgtcgatatgctcgccgacaagctcctcttcgagg 9035028 Score = 149 bits (75), Expect = 1e-32 Identities = 183/219 (83%) Strand = Plus / Minus Query: 262 ttcagtgtggcgttcgatccccttgatggttccagcatcgtggacaccaacttcaccgtg 321 |||||||| || ||||| || |||||||| |||||||| || ||||| |||||||| || Sbjct: 9034525 ttcagtgtagcattcgaccctcttgatgggtccagcattgtcgacacgaacttcacagtt 9034466 Query: 322 ggaaccatcttcggcgtgtggcccggcgacaagctgacgggcgtcaccggcggagaccag 381 |||||||| || || || ||||| || ||||||||||| ||||||||||| |||||||| Sbjct: 9034465 ggaaccatatttggtgtctggcctggtgacaagctgacaggcgtcaccggtggagaccaa 9034406 Query: 382 gttgctgccgccatgggcatctacggccctcgcaccaccttcgtcgtcgccctcaaggac 441 |||||||| |||||||||||||| ||||||||||| || | | | |||| ||||| || Sbjct: 9034405 gttgctgctgccatgggcatctatggccctcgcactacttacattatcgctctcaaagat 9034346 Query: 442 tgccccgggacgcatgaattccttcttctcgacgaaggt 480 || || || || ||||||||||||||||| || |||||| Sbjct: 9034345 tgtcctggaactcatgaattccttcttcttgatgaaggt 9034307 Score = 83.8 bits (42), Expect = 6e-13 Identities = 72/82 (87%) Strand = Plus / Minus Query: 173 aggcgctggagtactcccatgtgtgcaagtacgcgtgctctgaggaagtccccgagctgc 232 |||| ||||| ||||| ||||| |||||||| |||||||| ||||||||||| ||||||| Sbjct: 9034915 aggctctggaatactctcatgtctgcaagtatgcgtgctccgaggaagtcccggagctgc 9034856 Query: 233 aggacatgggtggccccgtcga 254 | ||||||||||| || ||||| Sbjct: 9034855 aagacatgggtggaccagtcga 9034834 Score = 79.8 bits (40), Expect = 9e-12 Identities = 61/68 (89%) Strand = Plus / Minus Query: 481 aaatggcagcatgtcaaggacaccacaagcattggagaagggaagatgttctcccctggc 540 ||||||||||||||| |||||||||||| ||||||||| ||||| |||||||| ||||| Sbjct: 9034220 aaatggcagcatgtccaggacaccacaaccattggagaggggaaaatgttctctcctggt 9034161 Query: 541 aatctgag 548 || ||||| Sbjct: 9034160 aacctgag 9034153
>emb|Y14608.1|CRCSBPGEN Chlamydomonas reinhardtii Csbp gene Length = 4222 Score = 129 bits (65), Expect = 1e-26 Identities = 107/121 (88%) Strand = Plus / Plus Query: 297 catcgtggacaccaacttcaccgtgggaaccatcttcggcgtgtggcccggcgacaagct 356 |||||| |||||||||||| ||||||| |||||||||||||||||||||||||||||||| Sbjct: 2424 catcgtcgacaccaacttcgccgtgggcaccatcttcggcgtgtggcccggcgacaagct 2483 Query: 357 gacgggcgtcaccggcggagaccaggttgctgccgccatgggcatctacggccctcgcac 416 ||| | |||||||| | || ||||| ||||||| ||||||||||||||| || ||||| Sbjct: 2484 gaccaacatcaccggccgcgagcaggtggctgccggcatgggcatctacggtccccgcac 2543 Query: 417 c 417 | Sbjct: 2544 c 2544 Score = 77.8 bits (39), Expect = 3e-11 Identities = 81/95 (85%) Strand = Plus / Plus Query: 94 tgcggcggcaccgcctgcgtcaactccttcggcgacgagcagctcgccgtcgacatgctc 153 |||| ||| ||||||||||| ||| ||||||||| |||||||| |||||||||||| | Sbjct: 2019 tgcgccggtaccgcctgcgtgaacagcttcggcgatgagcagctggccgtcgacatggtg 2078 Query: 154 gccgacaagctcctattcgaggcgctggagtactc 188 || |||||||| || |||||||| ||| ||||||| Sbjct: 2079 gctgacaagctgctgttcgaggccctgaagtactc 2113
>emb|X74418.1|CRCSBP C.reinhardtii csbp mRNA for sedoheptulose-bisphosphatas Length = 1610 Score = 123 bits (62), Expect = 6e-25 Identities = 101/114 (88%) Strand = Plus / Plus Query: 304 gacaccaacttcaccgtgggaaccatcttcggcgtgtggcccggcgacaagctgacgggc 363 |||||||||||| ||||||| ||||||||||||||||||||||||||||||||||| | Sbjct: 549 gacaccaacttcgccgtgggcaccatcttcggcgtgtggcccggcgacaagctgaccaac 608 Query: 364 gtcaccggcggagaccaggttgctgccgccatgggcatctacggccctcgcacc 417 |||||||| | || ||||| ||||||| ||||||||||||||| || |||||| Sbjct: 609 atcaccggccgcgagcaggtggctgccggcatgggcatctacggtccccgcacc 662 Score = 87.7 bits (44), Expect = 4e-14 Identities = 92/108 (85%) Strand = Plus / Plus Query: 94 tgcggcggcaccgcctgcgtcaactccttcggcgacgagcagctcgccgtcgacatgctc 153 |||| ||| ||||||||||| ||| ||||||||| |||||||| |||||||||||| | Sbjct: 348 tgcgccggtaccgcctgcgtgaacagcttcggcgatgagcagctggccgtcgacatggtg 407 Query: 154 gccgacaagctcctattcgaggcgctggagtactcccatgtgtgcaag 201 || |||||||| || |||||||| ||| ||||||| || ||||||||| Sbjct: 408 gctgacaagctgctgttcgaggccctgaagtactcgcacgtgtgcaag 455
>dbj|AB035313.1| Chlamydomonas sp. W80 sbp-1 mRNA for sedoheptulose-1,7-bisphosphatase, complete cds Length = 1361 Score = 113 bits (57), Expect = 6e-22 Identities = 105/121 (86%) Strand = Plus / Plus Query: 297 catcgtggacaccaacttcaccgtgggaaccatcttcggcgtgtggcccggcgacaagct 356 |||||| |||||||||||| |||| || |||||||||||||||||||| ||||||||||| Sbjct: 507 catcgtcgacaccaacttctccgtcggcaccatcttcggcgtgtggccgggcgacaagct 566 Query: 357 gacgggcgtcaccggcggagaccaggttgctgccgccatgggcatctacggccctcgcac 416 || ||| |||||||| | ||||||| ||| |||| ||||||| | |||||||| ||||| Sbjct: 567 caccggcatcaccggccgcgaccaggctgccgccggcatgggcgtgtacggcccccgcac 626 Query: 417 c 417 | Sbjct: 627 c 627 Score = 109 bits (55), Expect = 1e-20 Identities = 130/155 (83%) Strand = Plus / Plus Query: 75 caaggtcaggacggcgtcctgcggcggcaccgcctgcgtcaactccttcggcgacgagca 134 ||||||| | || ||||| |||||||||||||| ||||| ||||| |||||||||||||| Sbjct: 294 caaggtccgcaccgcgtcgtgcggcggcaccgcgtgcgtgaactcgttcggcgacgagca 353 Query: 135 gctcgccgtcgacatgctcgccgacaagctcctattcgaggcgctggagtactcccatgt 194 ||| |||||||||||| | |||||| |||| |||||||| || ||||||| || || Sbjct: 354 gctggccgtcgacatggtggccgacggcatcctgttcgaggccctcaagtactcgcacgt 413 Query: 195 gtgcaagtacgcgtgctctgaggaagtccccgagc 229 |||| |||||||||||| ||||| || ||||||| Sbjct: 414 gtgctcgtacgcgtgctccgaggaggtgcccgagc 448
>ref|NM_115438.3| Arabidopsis thaliana SBPASE; phosphoric ester hydrolase AT3G55800 (SBPASE) mRNA, complete cds Length = 1655 Score = 95.6 bits (48), Expect = 1e-16 Identities = 180/224 (80%) Strand = Plus / Plus Query: 184 tactcccatgtgtgcaagtacgcgtgctctgaggaagtccccgagctgcaggacatgggt 243 ||||| |||||||||||||| || |||||||| ||||| || ||||| || |||||||| Sbjct: 690 tactcgcatgtgtgcaagtatgcttgctctgaagaagtacctgagcttcaagacatggga 749 Query: 244 ggccccgtcgaaggcggattcagtgtggcgttcgatccccttgatggttccagcatcgtg 303 || || || ||||| || || ||||| ||||| ||||| | ||||| || ||||| ||| Sbjct: 750 ggtccagtggaaggtgggtttagtgttgcgtttgatccattggatggatcaagcattgtg 809 Query: 304 gacaccaacttcaccgtgggaaccatcttcggcgtgtggcccggcgacaagctgacgggc 363 || || || ||||| ||||||||||| ||||| || ||||| || |||||| | || || Sbjct: 810 gatacaaatttcactgtgggaaccatattcggtgtttggcctggagacaagttaaccgga 869 Query: 364 gtcaccggcggagaccaggttgctgccgccatgggcatctacgg 407 |||| || ||||| || || ||||| |||||||| |||||||| Sbjct: 870 atcactggaggagatcaagtggctgcagccatgggaatctacgg 913 Score = 40.1 bits (20), Expect = 7.4 Identities = 56/68 (82%) Strand = Plus / Plus Query: 466 cttctcgacgaaggtaaatggcagcatgtcaaggacaccacaagcattggagaagggaag 525 ||||| || ||||| |||||||||||||| ||||| || ||| || | ||||||||| Sbjct: 972 cttcttgatgaagggaaatggcagcatgtaaaggagacaacagagatcgcagaagggaaa 1031 Query: 526 atgttctc 533 |||||||| Sbjct: 1032 atgttctc 1039
>gb|AY128737.1| Arabidopsis thaliana sedoheptulose-bisphosphatase precursor (At3g55800) mRNA, complete cds Length = 1245 Score = 95.6 bits (48), Expect = 1e-16 Identities = 180/224 (80%) Strand = Plus / Plus Query: 184 tactcccatgtgtgcaagtacgcgtgctctgaggaagtccccgagctgcaggacatgggt 243 ||||| |||||||||||||| || |||||||| ||||| || ||||| || |||||||| Sbjct: 436 tactcgcatgtgtgcaagtatgcttgctctgaagaagtacctgagcttcaagacatggga 495 Query: 244 ggccccgtcgaaggcggattcagtgtggcgttcgatccccttgatggttccagcatcgtg 303 || || || ||||| || || ||||| ||||| ||||| | ||||| || ||||| ||| Sbjct: 496 ggtccagtggaaggtgggtttagtgttgcgtttgatccattggatggatcaagcattgtg 555 Query: 304 gacaccaacttcaccgtgggaaccatcttcggcgtgtggcccggcgacaagctgacgggc 363 || || || ||||| ||||||||||| ||||| || ||||| || |||||| | || || Sbjct: 556 gatacaaatttcactgtgggaaccatattcggtgtttggcctggagacaagttaaccgga 615 Query: 364 gtcaccggcggagaccaggttgctgccgccatgggcatctacgg 407 |||| || ||||| || || ||||| |||||||| |||||||| Sbjct: 616 atcactggaggagatcaagtggctgcagccatgggaatctacgg 659 Score = 40.1 bits (20), Expect = 7.4 Identities = 56/68 (82%) Strand = Plus / Plus Query: 466 cttctcgacgaaggtaaatggcagcatgtcaaggacaccacaagcattggagaagggaag 525 ||||| || ||||| |||||||||||||| ||||| || ||| || | ||||||||| Sbjct: 718 cttcttgatgaagggaaatggcagcatgtaaaggagacaacagagatcgcagaagggaaa 777 Query: 526 atgttctc 533 |||||||| Sbjct: 778 atgttctc 785
>gb|AY054669.1| Arabidopsis thaliana sedoheptulose-bisphosphatase precursor (At3g55800; F1I16_210) mRNA, complete cds Length = 1327 Score = 95.6 bits (48), Expect = 1e-16 Identities = 180/224 (80%) Strand = Plus / Plus Query: 184 tactcccatgtgtgcaagtacgcgtgctctgaggaagtccccgagctgcaggacatgggt 243 ||||| |||||||||||||| || |||||||| ||||| || ||||| || |||||||| Sbjct: 482 tactcgcatgtgtgcaagtatgcttgctctgaagaagtacctgagcttcaagacatggga 541 Query: 244 ggccccgtcgaaggcggattcagtgtggcgttcgatccccttgatggttccagcatcgtg 303 || || || ||||| || || ||||| ||||| ||||| | ||||| || ||||| ||| Sbjct: 542 ggtccagtggaaggtgggtttagtgttgcgtttgatccattggatggatcaagcattgtg 601 Query: 304 gacaccaacttcaccgtgggaaccatcttcggcgtgtggcccggcgacaagctgacgggc 363 || || || ||||| ||||||||||| ||||| || ||||| || |||||| | || || Sbjct: 602 gatacaaatttcactgtgggaaccatattcggtgtttggcctggagacaagttaaccgga 661 Query: 364 gtcaccggcggagaccaggttgctgccgccatgggcatctacgg 407 |||| || ||||| || || ||||| |||||||| |||||||| Sbjct: 662 atcactggaggagatcaagtggctgcagccatgggaatctacgg 705 Score = 40.1 bits (20), Expect = 7.4 Identities = 56/68 (82%) Strand = Plus / Plus Query: 466 cttctcgacgaaggtaaatggcagcatgtcaaggacaccacaagcattggagaagggaag 525 ||||| || ||||| |||||||||||||| ||||| || ||| || | ||||||||| Sbjct: 764 cttcttgatgaagggaaatggcagcatgtaaaggagacaacagagatcgcagaagggaaa 823 Query: 526 atgttctc 533 |||||||| Sbjct: 824 atgttctc 831
>gb|AY123067.1| Griffithsia japonica sedoheptulose-1,7-bisphosphatase mRNA, partial cds Length = 594 Score = 73.8 bits (37), Expect = 5e-10 Identities = 52/57 (91%) Strand = Plus / Plus Query: 106 gcctgcgtcaactccttcggcgacgagcagctcgccgtcgacatgctcgccgacaag 162 |||||| ||||| |||||||||||||||||||||| ||||| |||||||||||||| Sbjct: 304 gcctgcttcaacgacttcggcgacgagcagctcgccatcgacgtgctcgccgacaag 360
>gb|L76556.1|SPIS17B Spinacia oleracea chloroplast sedoheptulose-1,7-bisphosphatase mRNA, complete cds Length = 1416 Score = 73.8 bits (37), Expect = 5e-10 Identities = 130/161 (80%) Strand = Plus / Plus Query: 196 tgcaagtacgcgtgctctgaggaagtccccgagctgcaggacatgggtggccccgtcgaa 255 |||||||| || || || || ||| |||| ||||| || || ||||| |||||||| || Sbjct: 468 tgcaagtatgcttgttcagaagaactccctgagcttcaagatatgggaggccccgttgat 527 Query: 256 ggcggattcagtgtggcgttcgatccccttgatggttccagcatcgtggacaccaacttc 315 |||||||||||||| || || || ||||||||||| |||||||| || || ||||| ||| Sbjct: 528 ggcggattcagtgtagcatttgacccccttgatggatccagcattgtcgataccaatttc 587 Query: 316 accgtgggaaccatcttcggcgtgtggcccggcgacaagct 356 | || || ||||| ||||| || ||||| || |||||||| Sbjct: 588 tcagttgggaccatattcggggtttggccaggtgacaagct 628
>emb|AL161667.1|ATF1I16 Arabidopsis thaliana DNA chromosome 3, BAC clone F1I16 Length = 103785 Score = 54.0 bits (27), Expect = 5e-04 Identities = 114/143 (79%) Strand = Plus / Plus Query: 265 agtgtggcgttcgatccccttgatggttccagcatcgtggacaccaacttcaccgtggga 324 ||||| ||||| ||||| | ||||| || ||||| ||||| || || ||||| |||||| Sbjct: 98605 agtgttgcgtttgatccattggatggatcaagcattgtggatacaaatttcactgtggga 98664 Query: 325 accatcttcggcgtgtggcccggcgacaagctgacgggcgtcaccggcggagaccaggtt 384 ||||| ||||| || ||||| || |||||| | || || |||| || ||||| || || Sbjct: 98665 accatattcggtgtttggcctggagacaagttaaccggaatcactggaggagatcaagtg 98724 Query: 385 gctgccgccatgggcatctacgg 407 ||||| |||||||| |||||||| Sbjct: 98725 gctgcagccatgggaatctacgg 98747 Score = 54.0 bits (27), Expect = 5e-04 Identities = 51/59 (86%) Strand = Plus / Plus Query: 184 tactcccatgtgtgcaagtacgcgtgctctgaggaagtccccgagctgcaggacatggg 242 ||||| |||||||||||||| || |||||||| ||||| || ||||| || |||||||| Sbjct: 98434 tactcgcatgtgtgcaagtatgcttgctctgaagaagtacctgagcttcaagacatggg 98492
>gb|S74719.1| sedoheptulose-1,7-bisphosphatase [Arabidopsis thaliana, C24, Genomic, 2747 nt] Length = 2747 Score = 54.0 bits (27), Expect = 5e-04 Identities = 114/143 (79%) Strand = Plus / Plus Query: 265 agtgtggcgttcgatccccttgatggttccagcatcgtggacaccaacttcaccgtggga 324 ||||| ||||| ||||| | ||||| || ||||| ||||| || || ||||| |||||| Sbjct: 1694 agtgttgcgtttgatccattggatggatcaagcattgtggatacaaatttcactgtggga 1753 Query: 325 accatcttcggcgtgtggcccggcgacaagctgacgggcgtcaccggcggagaccaggtt 384 ||||| ||||| || ||||| || |||||| | || || |||| || ||||| || || Sbjct: 1754 accatattcggtgtttggcctggagacaagttaaccggaatcactggaggagatcaagtg 1813 Query: 385 gctgccgccatgggcatctacgg 407 ||||| |||||||| |||||||| Sbjct: 1814 gctgcagccatgggaatctacgg 1836 Score = 54.0 bits (27), Expect = 5e-04 Identities = 51/59 (86%) Strand = Plus / Plus Query: 184 tactcccatgtgtgcaagtacgcgtgctctgaggaagtccccgagctgcaggacatggg 242 ||||| |||||||||||||| || |||||||| ||||| || ||||| || |||||||| Sbjct: 1523 tactcgcatgtgtgcaagtatgcttgctctgaagaagtacctgagcttcaagacatggg 1581
>gb|AE016819.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome VI, complete sequence Length = 1813164 Score = 48.1 bits (24), Expect = 0.030 Identities = 24/24 (100%) Strand = Plus / Plus Query: 95 gcggcggcaccgcctgcgtcaact 118 |||||||||||||||||||||||| Sbjct: 410944 gcggcggcaccgcctgcgtcaact 410967
>ref|NM_210888.1| Eremothecium gossypii AFL014Cp (AFL014C), mRNA Length = 1674 Score = 48.1 bits (24), Expect = 0.030 Identities = 24/24 (100%) Strand = Plus / Minus Query: 95 gcggcggcaccgcctgcgtcaact 118 |||||||||||||||||||||||| Sbjct: 226 gcggcggcaccgcctgcgtcaact 203
>gb|AC164581.7| Mus musculus 10 BAC RP23-45O2 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 199422 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Minus Query: 39 attctgcatgggggaggcgatgagga 64 |||||||||||||||||| ||||||| Sbjct: 30161 attctgcatgggggaggcaatgagga 30136
>emb|BX825749.1|CNS0A59I Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL5ZF12 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1437 Score = 44.1 bits (22), Expect = 0.48 Identities = 34/38 (89%) Strand = Plus / Plus Query: 466 cttctcgacgaaggtaaatggcagcatgtcaaggacac 503 ||||| || ||||| |||||||||||||| |||||||| Sbjct: 881 cttcttgatgaagggaaatggcagcatgtaaaggacac 918
>gb|AC153816.4| Mus musculus BAC RP23-8N6 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 217283 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Minus Query: 39 attctgcatgggggaggcgatgagga 64 |||||||||||||||||| ||||||| Sbjct: 184089 attctgcatgggggaggcaatgagga 184064
>ref|XM_463740.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 888 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 117 ctccttcggcgacgagcagctcgcc 141 ||||||||||| ||||||||||||| Sbjct: 462 ctccttcggcgtcgagcagctcgcc 486
>gb|AC151480.1| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNAa0068G15, complete sequence Length = 130161 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 117 ctccttcggcgacgagcagctcgcc 141 ||||||||||| ||||||||||||| Sbjct: 76712 ctccttcggcgtcgagcagctcgcc 76736
>gb|AC123526.2| Oryza sativa japonica cultivar-group chromosome 11 clone OSJNBa0059J06, complete sequence Length = 185449 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 117 ctccttcggcgacgagcagctcgcc 141 ||||||||||| ||||||||||||| Sbjct: 6551 ctccttcggcgtcgagcagctcgcc 6575
>ref|XM_536728.2| PREDICTED: Canis familiaris similar to neuronal RhoA GEF protein (LOC479590), mRNA Length = 3312 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 210 ctctgaggaagtccccgagctgcag 234 ||||||||||||||||| ||||||| Sbjct: 1546 ctctgaggaagtccccgggctgcag 1522
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 117 ctccttcggcgacgagcagctcgcc 141 ||||||||||| ||||||||||||| Sbjct: 1869164 ctccttcggcgtcgagcagctcgcc 1869188
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 117 ctccttcggcgacgagcagctcgcc 141 ||||||||||| ||||||||||||| Sbjct: 1934996 ctccttcggcgtcgagcagctcgcc 1935020
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 117 ctccttcggcgacgagcagctcgcc 141 ||||||||||| ||||||||||||| Sbjct: 10614253 ctccttcggcgtcgagcagctcgcc 10614229
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 117 ctccttcggcgacgagcagctcgcc 141 ||||||||||| ||||||||||||| Sbjct: 41848137 ctccttcggcgtcgagcagctcgcc 41848113
>dbj|AP003735.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1147A04 Length = 150053 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 117 ctccttcggcgacgagcagctcgcc 141 ||||||||||| ||||||||||||| Sbjct: 91513 ctccttcggcgtcgagcagctcgcc 91489
>dbj|AP004158.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1118_F05 Length = 134247 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 117 ctccttcggcgacgagcagctcgcc 141 ||||||||||| ||||||||||||| Sbjct: 41893 ctccttcggcgtcgagcagctcgcc 41869
>emb|AM039800.1| Fritillary virus Y complete virion genome, isolate Pan'an Length = 9656 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 290 gttccagcatcgtggacaccaacttcacc 318 |||||||||||| || ||||||||||||| Sbjct: 8622 gttccagcatcgagggcaccaacttcacc 8594
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 117 ctccttcggcgacgagcagctcgcc 141 ||||||||||| ||||||||||||| Sbjct: 1942777 ctccttcggcgtcgagcagctcgcc 1942801
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 117 ctccttcggcgacgagcagctcgcc 141 ||||||||||| ||||||||||||| Sbjct: 1869115 ctccttcggcgtcgagcagctcgcc 1869139
>emb|AL935154.2|CNS08CCP Oryza sativa chromosome 12, . BAC OSJNBb0109O08 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 128619 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 117 ctccttcggcgacgagcagctcgcc 141 ||||||||||| ||||||||||||| Sbjct: 63882 ctccttcggcgtcgagcagctcgcc 63906
>emb|AL928752.2|CNS08CBP Oryza sativa chromosome 12, . BAC OSJNBb0034E23 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 107247 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 117 ctccttcggcgacgagcagctcgcc 141 ||||||||||| ||||||||||||| Sbjct: 99057 ctccttcggcgtcgagcagctcgcc 99033
>gb|AC153801.1| Mus musculus 10 NOVECTOR RP24-255E19 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 156755 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 490 catgtcaaggacaccacaag 509 |||||||||||||||||||| Sbjct: 57317 catgtcaaggacaccacaag 57336
>gb|AE001274.2| Leishmania major strain Friedlin chromosome 1, complete sequence Length = 268984 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 145 gacatgctcgccgacaagct 164 |||||||||||||||||||| Sbjct: 266915 gacatgctcgccgacaagct 266896
>ref|XM_581714.2| PREDICTED: Bos taurus similar to mitogen-activated protein kinase kinase kinase 12, transcript variant 1 (LOC505427), mRNA Length = 3225 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 226 gagctgcaggacatgggtgg 245 |||||||||||||||||||| Sbjct: 150 gagctgcaggacatgggtgg 131
>ref|XM_380903.1| Gibberella zeae PH-1 chromosome 1 hypothetical protein (FG00727.1) partial mRNA Length = 1635 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 420 cttcgtcgtcgccctcaagg 439 |||||||||||||||||||| Sbjct: 1217 cttcgtcgtcgccctcaagg 1236
>ref|XM_949403.1| Theileria annulata strain Ankara ubiquitin-protein ligase 1 (TA19515) partial mRNA Length = 13257 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 104 ccgcctgcgtcaactccttc 123 |||||||||||||||||||| Sbjct: 12314 ccgcctgcgtcaactccttc 12295
>emb|AL954189.5| Mouse DNA sequence from clone RP23-405M24 on chromosome 4 Contains the 5' end of the Ptprd gene for receptor type protein tyrosine phosphatase D, complete sequence Length = 172364 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 492 tgtcaaggacaccacaagca 511 |||||||||||||||||||| Sbjct: 125961 tgtcaaggacaccacaagca 125980
>gb|AC154778.2| Mus musculus BAC clone RP24-459I17 from chromosome 12, complete sequence Length = 155367 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 493 gtcaaggacaccacaagcat 512 |||||||||||||||||||| Sbjct: 39002 gtcaaggacaccacaagcat 38983
>gb|AY787762.1| Streptomyces filamentosus strain NRRL 11379 daptomycin biosynthetic gene cluster, partial sequence Length = 127559 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 88 gcgtcctgcggcggcaccgc 107 |||||||||||||||||||| Sbjct: 107782 gcgtcctgcggcggcaccgc 107763
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 85 acggcgtcctgcggcggcaccgcc 108 ||||||||| |||||||||||||| Sbjct: 3091194 acggcgtccagcggcggcaccgcc 3091217
>gb|AC155257.1| Mus musculus BAC clone RP24-109N5 from 16, complete sequence Length = 185931 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 490 catgtcaaggacaccacaag 509 |||||||||||||||||||| Sbjct: 42886 catgtcaaggacaccacaag 42905
>emb|CT010573.10| Mouse DNA sequence from clone RP23-238K22 on chromosome 16, complete sequence Length = 199723 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 490 catgtcaaggacaccacaag 509 |||||||||||||||||||| Sbjct: 5467 catgtcaaggacaccacaag 5486
>emb|CT030189.8| Mouse DNA sequence from clone RP24-402B23 on chromosome 12, complete sequence Length = 223910 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 493 gtcaaggacaccacaagcat 512 |||||||||||||||||||| Sbjct: 30949 gtcaaggacaccacaagcat 30968 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,537,705 Number of Sequences: 3902068 Number of extensions: 3537705 Number of successful extensions: 67109 Number of sequences better than 10.0: 52 Number of HSP's better than 10.0 without gapping: 52 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 66631 Number of HSP's gapped (non-prelim): 468 length of query: 548 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 525 effective length of database: 17,143,297,704 effective search space: 9000231294600 effective search space used: 9000231294600 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
