| Clone Name | baal8l15 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK065299.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002N17, full insert sequence Length = 2760 Score = 391 bits (197), Expect = e-105 Identities = 271/296 (91%) Strand = Plus / Plus Query: 205 cgtgtttgtgtncgctgaaatatggagatacagacttcaggaaagcccatcgatatgttg 264 |||||||| | |||||||| ||||||||||| |||||||| |||||||| ||| || || Sbjct: 267 cgtgtttgcattcgctgaaagatggagatacaaacttcagggaagcccattgatctgctg 326 Query: 265 atggagaaggttctttgtatgaatattctttcttctgattacttcaaggagctctacagg 324 ||||||||||||||||||||||| ||| | |||||||||||||||||||||||||||||| Sbjct: 327 atggagaaggttctttgtatgaacattatgtcttctgattacttcaaggagctctacagg 386 Query: 325 atgaagacctatcatgaggtcattgacgagatctataaccaagttgatcatgtggagcct 384 ||||||||||||||||||||||||| || || || || ||||||||||||||||||||| Sbjct: 387 ctgaagacctatcatgaggtcattgatgaaatatacaatcaagttgatcatgtggagcct 446 Query: 385 tggatgactggcaattgcaggggtccttccactgcattttgtctcctgtacaagttcttc 444 ||||||||||||||||||||||| || ||||||||||| |||||||| |||||||||||| Sbjct: 447 tggatgactggcaattgcaggggcccctccactgcattctgtctcctctacaagttcttc 506 Query: 445 acaatgaagcttactgtgaaacagatgcatggtttgttgaagcatcctgactcccc 500 || |||||||||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 507 accatgaagcttactgtcaaacagatgcatggtttgttgaagcatcctgattcccc 562
>gb|AC130610.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0478F09, complete sequence Length = 145070 Score = 389 bits (196), Expect = e-105 Identities = 262/284 (92%) Strand = Plus / Plus Query: 217 cgctgaaatatggagatacagacttcaggaaagcccatcgatatgttgatggagaaggtt 276 |||||||| ||||||||||| |||||||| |||||||| ||| || |||||||||||||| Sbjct: 16106 cgctgaaagatggagatacaaacttcagggaagcccattgatctgctgatggagaaggtt 16165 Query: 277 ctttgtatgaatattctttcttctgattacttcaaggagctctacaggatgaagacctat 336 ||||||||||| ||| | |||||||||||||||||||||||||||||| ||||||||||| Sbjct: 16166 ctttgtatgaacattatgtcttctgattacttcaaggagctctacaggctgaagacctat 16225 Query: 337 catgaggtcattgacgagatctataaccaagttgatcatgtggagccttggatgactggc 396 |||||||||||||| || || || || ||||||||||||||||||||||||||||||||| Sbjct: 16226 catgaggtcattgatgaaatatacaatcaagttgatcatgtggagccttggatgactggc 16285 Query: 397 aattgcaggggtccttccactgcattttgtctcctgtacaagttcttcacaatgaagctt 456 ||||||||||| || ||||||||||| |||||||| |||||||||||||| ||||||||| Sbjct: 16286 aattgcaggggcccctccactgcattctgtctcctctacaagttcttcaccatgaagctt 16345 Query: 457 actgtgaaacagatgcatggtttgttgaagcatcctgactcccc 500 ||||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 16346 actgtcaaacagatgcatggtttgttgaagcatcctgattcccc 16389
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 389 bits (196), Expect = e-105 Identities = 262/284 (92%) Strand = Plus / Plus Query: 217 cgctgaaatatggagatacagacttcaggaaagcccatcgatatgttgatggagaaggtt 276 |||||||| ||||||||||| |||||||| |||||||| ||| || |||||||||||||| Sbjct: 4646763 cgctgaaagatggagatacaaacttcagggaagcccattgatctgctgatggagaaggtt 4646822 Query: 277 ctttgtatgaatattctttcttctgattacttcaaggagctctacaggatgaagacctat 336 ||||||||||| ||| | |||||||||||||||||||||||||||||| ||||||||||| Sbjct: 4646823 ctttgtatgaacattatgtcttctgattacttcaaggagctctacaggctgaagacctat 4646882 Query: 337 catgaggtcattgacgagatctataaccaagttgatcatgtggagccttggatgactggc 396 |||||||||||||| || || || || ||||||||||||||||||||||||||||||||| Sbjct: 4646883 catgaggtcattgatgaaatatacaatcaagttgatcatgtggagccttggatgactggc 4646942 Query: 397 aattgcaggggtccttccactgcattttgtctcctgtacaagttcttcacaatgaagctt 456 ||||||||||| || ||||||||||| |||||||| |||||||||||||| ||||||||| Sbjct: 4646943 aattgcaggggcccctccactgcattctgtctcctctacaagttcttcaccatgaagctt 4647002 Query: 457 actgtgaaacagatgcatggtttgttgaagcatcctgactcccc 500 ||||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 4647003 actgtcaaacagatgcatggtttgttgaagcatcctgattcccc 4647046
>dbj|AK121556.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033033I04, full insert sequence Length = 1815 Score = 389 bits (196), Expect = e-105 Identities = 262/284 (92%) Strand = Plus / Plus Query: 217 cgctgaaatatggagatacagacttcaggaaagcccatcgatatgttgatggagaaggtt 276 |||||||| ||||||||||| |||||||| |||||||| ||| || |||||||||||||| Sbjct: 223 cgctgaaagatggagatacaaacttcagggaagcccattgatctgctgatggagaaggtt 282 Query: 277 ctttgtatgaatattctttcttctgattacttcaaggagctctacaggatgaagacctat 336 ||||||||||| ||| | |||||||||||||||||||||||||||||| ||||||||||| Sbjct: 283 ctttgtatgaacattatgtcttctgattacttcaaggagctctacaggctgaagacctat 342 Query: 337 catgaggtcattgacgagatctataaccaagttgatcatgtggagccttggatgactggc 396 |||||||||||||| || || || || ||||||||||||||||||||||||||||||||| Sbjct: 343 catgaggtcattgatgaaatatacaatcaagttgatcatgtggagccttggatgactggc 402 Query: 397 aattgcaggggtccttccactgcattttgtctcctgtacaagttcttcacaatgaagctt 456 ||||||||||| || ||||||||||| |||||||| |||||||||||||| ||||||||| Sbjct: 403 aattgcaggggcccctccactgcattctgtctcctctacaagttcttcaccatgaagctt 462 Query: 457 actgtgaaacagatgcatggtttgttgaagcatcctgactcccc 500 ||||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 463 actgtcaaacagatgcatggtttgttgaagcatcctgattcccc 506
>ref|XM_476057.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1305 Score = 379 bits (191), Expect = e-102 Identities = 254/275 (92%) Strand = Plus / Plus Query: 226 atggagatacagacttcaggaaagcccatcgatatgttgatggagaaggttctttgtatg 285 ||||||||||| |||||||| |||||||| ||| || ||||||||||||||||||||||| Sbjct: 1 atggagatacaaacttcagggaagcccattgatctgctgatggagaaggttctttgtatg 60 Query: 286 aatattctttcttctgattacttcaaggagctctacaggatgaagacctatcatgaggtc 345 || ||| | |||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 61 aacattatgtcttctgattacttcaaggagctctacaggctgaagacctatcatgaggtc 120 Query: 346 attgacgagatctataaccaagttgatcatgtggagccttggatgactggcaattgcagg 405 ||||| || || || || |||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 attgatgaaatatacaatcaagttgatcatgtggagccttggatgactggcaattgcagg 180 Query: 406 ggtccttccactgcattttgtctcctgtacaagttcttcacaatgaagcttactgtgaaa 465 || || ||||||||||| |||||||| |||||||||||||| |||||||||||||| ||| Sbjct: 181 ggcccctccactgcattctgtctcctctacaagttcttcaccatgaagcttactgtcaaa 240 Query: 466 cagatgcatggtttgttgaagcatcctgactcccc 500 ||||||||||||||||||||||||||||| ||||| Sbjct: 241 cagatgcatggtttgttgaagcatcctgattcccc 275
>gb|BT024122.1| Zea mays clone EL01N0501H04 mRNA sequence Length = 1832 Score = 291 bits (147), Expect = 1e-75 Identities = 243/275 (88%) Strand = Plus / Plus Query: 226 atggagatacagacttcaggaaagcccatcgatatgttgatggagaaggttctttgtatg 285 ||||||||||| |||||||| |||||||| ||| || ||||||||||||||||| | ||| Sbjct: 280 atggagatacaaacttcagggaagcccattgatgtgctgatggagaaggttcttagcatg 339 Query: 286 aatattctttcttctgattacttcaaggagctctacaggatgaagacctatcatgaggtc 345 || ||||| |||||||||||||| ||||||||||| ||| |||| ||||||||||||||| Sbjct: 340 aacattctgtcttctgattactttaaggagctctataggttgaaaacctatcatgaggtc 399 Query: 346 attgacgagatctataaccaagttgatcatgtggagccttggatgactggcaattgcagg 405 || || |||||||| ||| || | |||||||||||||||||||||||||||||||| Sbjct: 400 atcgatgagatctacaacactgtcaaacatgtggagccttggatgactggcaattgcaga 459 Query: 406 ggtccttccactgcattttgtctcctgtacaagttcttcacaatgaagcttactgtgaaa 465 || || ||||||||||| ||||| || ||||||||||| || |||||||||||||| ||| Sbjct: 460 ggcccctccactgcattctgtcttctatacaagttctttaccatgaagcttactgtcaaa 519 Query: 466 cagatgcatggtttgttgaagcatcctgactcccc 500 |||||||| |||||||||||||||||||||||||| Sbjct: 520 cagatgcacggtttgttgaagcatcctgactcccc 554
>ref|NM_123096.3| Arabidopsis thaliana binding AT5G37370 transcript variant AT5G37370.2 mRNA, complete cds Length = 1466 Score = 125 bits (63), Expect = 1e-25 Identities = 174/211 (82%) Strand = Plus / Plus Query: 266 tggagaaggttctttgtatgaatattctttcttctgattacttcaaggagctctacagga 325 |||| |||||||||| ||||| |||||||||||||| || || || |||||||| | Sbjct: 192 tggaaaaggttctttcaatgaacattctttcttctgactattttaaagagctctatggtt 251 Query: 326 tgaagacctatcatgaggtcattgacgagatctataaccaagttgatcatgtggagcctt 385 | ||||| ||||||||||| ||||| || ||||| ||||||||| ||||||||||||| | Sbjct: 252 taaagacttatcatgaggtaattgatgaaatctacaaccaagttaatcatgtggagccgt 311 Query: 386 ggatgactggcaattgcaggggtccttccactgcattttgtctcctgtacaagttcttca 445 ||||| ||| |||||| | |||||||| || || | |||||| || ||||| ||||| | Sbjct: 312 ggatgggtgggaattgccgtggtccttcaacagcgtattgtcttctctacaaattcttta 371 Query: 446 caatgaagcttactgtgaaacagatgcatgg 476 | ||||| ||||| ||||| ||||||||||| Sbjct: 372 ccatgaaacttacagtgaagcagatgcatgg 402
>ref|NM_180770.1| Arabidopsis thaliana binding AT5G37370 transcript variant AT5G37370.1 mRNA, complete cds Length = 1490 Score = 125 bits (63), Expect = 1e-25 Identities = 174/211 (82%) Strand = Plus / Plus Query: 266 tggagaaggttctttgtatgaatattctttcttctgattacttcaaggagctctacagga 325 |||| |||||||||| ||||| |||||||||||||| || || || |||||||| | Sbjct: 192 tggaaaaggttctttcaatgaacattctttcttctgactattttaaagagctctatggtt 251 Query: 326 tgaagacctatcatgaggtcattgacgagatctataaccaagttgatcatgtggagcctt 385 | ||||| ||||||||||| ||||| || ||||| ||||||||| ||||||||||||| | Sbjct: 252 taaagacttatcatgaggtaattgatgaaatctacaaccaagttaatcatgtggagccgt 311 Query: 386 ggatgactggcaattgcaggggtccttccactgcattttgtctcctgtacaagttcttca 445 ||||| ||| |||||| | |||||||| || || | |||||| || ||||| ||||| | Sbjct: 312 ggatgggtgggaattgccgtggtccttcaacagcgtattgtcttctctacaaattcttta 371 Query: 446 caatgaagcttactgtgaaacagatgcatgg 476 | ||||| ||||| ||||| ||||||||||| Sbjct: 372 ccatgaaacttacagtgaagcagatgcatgg 402
>gb|BT013232.1| Lycopersicon esculentum clone 134484F, mRNA sequence Length = 1841 Score = 125 bits (63), Expect = 1e-25 Identities = 189/231 (81%) Strand = Plus / Plus Query: 261 gttgatggagaaggttctttgtatgaatattctttcttctgattacttcaaggagctcta 320 |||| ||||||||||||| || ||||| ||||| |||||||||||||||| || || | Sbjct: 245 gttgttggagaaggttctctgcatgaacattctatcttctgattacttcagagacctttt 304 Query: 321 caggatgaagacctatcatgaggtcattgacgagatctataaccaagttgatcatgtgga 380 | |||| || |||||||| || ||||| || |||||||| |||||||| |||||||| Sbjct: 305 gcgcctgaaaacttatcatgaagtgattgatgaaatctataatcaagttgaccatgtgga 364 Query: 381 gccttggatgactggcaattgcaggggtccttccactgcattttgtctcctgtacaagtt 440 || |||||||||||||| || | |||||||| || || || || || || |||||||| Sbjct: 365 accatggatgactggcaactgtcgtggtccttcaacagccttctgccttctctacaagtt 424 Query: 441 cttcacaatgaagcttactgtgaaacagatgcatggtttgttgaagcatcc 491 |||||||||||| |||||||| || || |||||||| |||| |||||||| Sbjct: 425 cttcacaatgaaacttactgtcaagcaaatgcatggcctgttaaagcatcc 475
>gb|BT008856.1| Arabidopsis thaliana At5g37370 mRNA, complete cds Length = 1182 Score = 125 bits (63), Expect = 1e-25 Identities = 174/211 (82%) Strand = Plus / Plus Query: 266 tggagaaggttctttgtatgaatattctttcttctgattacttcaaggagctctacagga 325 |||| |||||||||| ||||| |||||||||||||| || || || |||||||| | Sbjct: 44 tggaaaaggttctttcaatgaacattctttcttctgactattttaaagagctctatggtt 103 Query: 326 tgaagacctatcatgaggtcattgacgagatctataaccaagttgatcatgtggagcctt 385 | ||||| ||||||||||| ||||| || ||||| ||||||||| ||||||||||||| | Sbjct: 104 taaagacttatcatgaggtaattgatgaaatctacaaccaagttaatcatgtggagccgt 163 Query: 386 ggatgactggcaattgcaggggtccttccactgcattttgtctcctgtacaagttcttca 445 ||||| ||| |||||| | |||||||| || || | |||||| || ||||| ||||| | Sbjct: 164 ggatgggtgggaattgccgtggtccttcaacagcgtattgtcttctctacaaattcttta 223 Query: 446 caatgaagcttactgtgaaacagatgcatgg 476 | ||||| ||||| ||||| ||||||||||| Sbjct: 224 ccatgaaacttacagtgaagcagatgcatgg 254
>gb|AY093216.1| Arabidopsis thaliana unknown protein (At5g37370) mRNA, complete cds Length = 1490 Score = 125 bits (63), Expect = 1e-25 Identities = 174/211 (82%) Strand = Plus / Plus Query: 266 tggagaaggttctttgtatgaatattctttcttctgattacttcaaggagctctacagga 325 |||| |||||||||| ||||| |||||||||||||| || || || |||||||| | Sbjct: 192 tggaaaaggttctttcaatgaacattctttcttctgactattttaaagagctctatggtt 251 Query: 326 tgaagacctatcatgaggtcattgacgagatctataaccaagttgatcatgtggagcctt 385 | ||||| ||||||||||| ||||| || ||||| ||||||||| ||||||||||||| | Sbjct: 252 taaagacttatcatgaggtaattgatgaaatctacaaccaagttaatcatgtggagccgt 311 Query: 386 ggatgactggcaattgcaggggtccttccactgcattttgtctcctgtacaagttcttca 445 ||||| ||| |||||| | |||||||| || || | |||||| || ||||| ||||| | Sbjct: 312 ggatgggtgggaattgccgtggtccttcaacagcgtattgtcttctctacaaattcttta 371 Query: 446 caatgaagcttactgtgaaacagatgcatgg 476 | ||||| ||||| ||||| ||||||||||| Sbjct: 372 ccatgaaacttacagtgaagcagatgcatgg 402
>dbj|AB017069.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MNJ8 Length = 88128 Score = 125 bits (63), Expect = 1e-25 Identities = 174/211 (82%) Strand = Plus / Minus Query: 266 tggagaaggttctttgtatgaatattctttcttctgattacttcaaggagctctacagga 325 |||| |||||||||| ||||| |||||||||||||| || || || |||||||| | Sbjct: 84524 tggaaaaggttctttcaatgaacattctttcttctgactattttaaagagctctatggtt 84465 Query: 326 tgaagacctatcatgaggtcattgacgagatctataaccaagttgatcatgtggagcctt 385 | ||||| ||||||||||| ||||| || ||||| ||||||||| ||||||||||||| | Sbjct: 84464 taaagacttatcatgaggtaattgatgaaatctacaaccaagttaatcatgtggagccgt 84405 Query: 386 ggatgactggcaattgcaggggtccttccactgcattttgtctcctgtacaagttcttca 445 ||||| ||| |||||| | |||||||| || || | |||||| || ||||| ||||| | Sbjct: 84404 ggatgggtgggaattgccgtggtccttcaacagcgtattgtcttctctacaaattcttta 84345 Query: 446 caatgaagcttactgtgaaacagatgcatgg 476 | ||||| ||||| ||||| ||||||||||| Sbjct: 84344 ccatgaaacttacagtgaagcagatgcatgg 84314
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 119 bits (60), Expect = 9e-24 Identities = 219/272 (80%) Strand = Plus / Minus Query: 226 atggagatacagacttcaggaaagcccatcgatatgttgatggagaaggttctttgtatg 285 |||||||||||| | ||||| | ||| |||||| || | |||||||||||| | | || Sbjct: 2288484 atggagatacagtcatcagggaggccaatcgatgtgctcatggagaaggttttgtcagtg 2288425 Query: 286 aatattctttcttctgattacttcaaggagctctacaggatgaagacctatcatgaggtc 345 || || || || || || ||||||||||||||||||||| ||||||| || || |||||| Sbjct: 2288424 aacatcctctcctcggactacttcaaggagctctacaggctgaagacttaccacgaggtc 2288365 Query: 346 attgacgagatctataaccaagttgatcatgtggagccttggatgactggcaattgcagg 405 ||||| |||||||| || || ||||| || || ||||| |||||||| ||||| ||| | Sbjct: 2288364 attgatgagatctacaatcaggttgaccacgtagagccatggatgaccggcaactgccgc 2288305 Query: 406 ggtccttccactgcattttgtctcctgtacaagttcttcacaatgaagcttactgtgaaa 465 || || |||| || || || ||||| |||||||||||||| |||||||| || || || Sbjct: 2288304 gggccctccagcgccttctgcctcctctacaagttcttcaccatgaagctcacggttaag 2288245 Query: 466 cagatgcatggtttgttgaagcatcctgactc 497 |||||||| || || ||||||| |||||||| Sbjct: 2288244 cagatgcacggcctgctgaagcaccctgactc 2288213
>dbj|AP003487.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0007O20 Length = 147363 Score = 119 bits (60), Expect = 9e-24 Identities = 219/272 (80%) Strand = Plus / Minus Query: 226 atggagatacagacttcaggaaagcccatcgatatgttgatggagaaggttctttgtatg 285 |||||||||||| | ||||| | ||| |||||| || | |||||||||||| | | || Sbjct: 10285 atggagatacagtcatcagggaggccaatcgatgtgctcatggagaaggttttgtcagtg 10226 Query: 286 aatattctttcttctgattacttcaaggagctctacaggatgaagacctatcatgaggtc 345 || || || || || || ||||||||||||||||||||| ||||||| || || |||||| Sbjct: 10225 aacatcctctcctcggactacttcaaggagctctacaggctgaagacttaccacgaggtc 10166 Query: 346 attgacgagatctataaccaagttgatcatgtggagccttggatgactggcaattgcagg 405 ||||| |||||||| || || ||||| || || ||||| |||||||| ||||| ||| | Sbjct: 10165 attgatgagatctacaatcaggttgaccacgtagagccatggatgaccggcaactgccgc 10106 Query: 406 ggtccttccactgcattttgtctcctgtacaagttcttcacaatgaagcttactgtgaaa 465 || || |||| || || || ||||| |||||||||||||| |||||||| || || || Sbjct: 10105 gggccctccagcgccttctgcctcctctacaagttcttcaccatgaagctcacggttaag 10046 Query: 466 cagatgcatggtttgttgaagcatcctgactc 497 |||||||| || || ||||||| |||||||| Sbjct: 10045 cagatgcacggcctgctgaagcaccctgactc 10014
>dbj|AP000399.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, clone:P0535G04 Length = 154180 Score = 119 bits (60), Expect = 9e-24 Identities = 219/272 (80%) Strand = Plus / Minus Query: 226 atggagatacagacttcaggaaagcccatcgatatgttgatggagaaggttctttgtatg 285 |||||||||||| | ||||| | ||| |||||| || | |||||||||||| | | || Sbjct: 147941 atggagatacagtcatcagggaggccaatcgatgtgctcatggagaaggttttgtcagtg 147882 Query: 286 aatattctttcttctgattacttcaaggagctctacaggatgaagacctatcatgaggtc 345 || || || || || || ||||||||||||||||||||| ||||||| || || |||||| Sbjct: 147881 aacatcctctcctcggactacttcaaggagctctacaggctgaagacttaccacgaggtc 147822 Query: 346 attgacgagatctataaccaagttgatcatgtggagccttggatgactggcaattgcagg 405 ||||| |||||||| || || ||||| || || ||||| |||||||| ||||| ||| | Sbjct: 147821 attgatgagatctacaatcaggttgaccacgtagagccatggatgaccggcaactgccgc 147762 Query: 406 ggtccttccactgcattttgtctcctgtacaagttcttcacaatgaagcttactgtgaaa 465 || || |||| || || || ||||| |||||||||||||| |||||||| || || || Sbjct: 147761 gggccctccagcgccttctgcctcctctacaagttcttcaccatgaagctcacggttaag 147702 Query: 466 cagatgcatggtttgttgaagcatcctgactc 497 |||||||| || || ||||||| |||||||| Sbjct: 147701 cagatgcacggcctgctgaagcaccctgactc 147670
>dbj|AP006429.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT17D07, TM0322, complete sequence Length = 109570 Score = 99.6 bits (50), Expect = 9e-18 Identities = 167/206 (81%) Strand = Plus / Minus Query: 268 gagaaggttctttgtatgaatattctttcttctgattacttcaaggagctctacaggatg 327 ||||| || ||||||||||||||||| || ||||||||||||||||||||||| | | Sbjct: 33268 gagaaagtcctttgtatgaatattctgtcatctgattacttcaaggagctctatcgctta 33209 Query: 328 aagacctatcatgaggtcattgacgagatctataaccaagttgatcatgtggagccttgg 387 || || || | ||| || ||||| |||||||| || ||||||||||||||||| || ||| Sbjct: 33208 aaaacataccttgaagttattgatgagatctacaatcaagttgatcatgtggaaccatgg 33149 Query: 388 atgactggcaattgcaggggtccttccactgcattttgtctcctgtacaagttcttcaca 447 ||| | || ||||| | |||||||| ||| || ||||| || ||| ||||||| ||| Sbjct: 33148 atggcggggaattgtcgtggtccttcaacttttttctgtcttctttactagttctttaca 33089 Query: 448 atgaagcttactgtgaaacagatgca 473 |||| ||| ||||| ||||| ||||| Sbjct: 33088 atgatgctcactgtcaaacaaatgca 33063
>gb|AY103933.1| Zea mays PCO094535 mRNA sequence Length = 1426 Score = 77.8 bits (39), Expect = 3e-11 Identities = 168/211 (79%) Strand = Plus / Plus Query: 263 tgatggagaaggttctttgtatgaatattctttcttctgattacttcaaggagctctaca 322 ||||||||||||| || | ||||||| || ||||| || |||||||||||||||| || Sbjct: 198 tgatggagaaggtgctgtccgtgaatatcctctcttcggactacttcaaggagctcttca 257 Query: 323 ggatgaagacctatcatgaggtcattgacgagatctataaccaagttgatcatgtggagc 382 | |||||||| || |||||| | ||||||||||| ||||| || || || || |||| Sbjct: 258 agtacaagacctaccacgaggtcgtcgacgagatctacaaccaggtggaccacgtcgagc 317 Query: 383 cttggatgactggcaattgcaggggtccttccactgcattttgtctcctgtacaagttct 442 | |||||||| ||||| ||| | || || ||| | || || || ||||| |||||||| | Sbjct: 318 cctggatgaccggcaactgccgcgggccctcctccgccttctgcctcctctacaagttat 377 Query: 443 tcacaatgaagcttactgtgaaacagatgca 473 |||| |||||||| || || || |||||||| Sbjct: 378 tcaccatgaagctcaccgtcaagcagatgca 408
>gb|AC116926.1| Genomic sequence for Oryza sativa (japonica cultivar-group) cultivar Nipponbare clone OJ1341F06, from chromosome 10, complete sequence Length = 102520 Score = 69.9 bits (35), Expect = 8e-09 Identities = 156/195 (80%), Gaps = 1/195 (0%) Strand = Plus / Plus Query: 304 tacttcaaggagctctacaggatgaagacctatcatgaggtcattgacgagatctataac 363 |||||||||||||| |||||| | ||||| || || |||||||| ||| |||||| ||| Sbjct: 41550 tacttcaaggagctgtacaggcttaagacgtaccacgaggtcatcaacgtgatctacaac 41609 Query: 364 caagttgatcatgtggagccttggatgactgg-caattgcaggggtccttccactgcatt 422 || ||||| || || |||| |||||||| || ||| ||| | || || |||| | || Sbjct: 41610 caggttgaccacgtcgagcaatggatgaccgggcaactgctgtggcccctccagcgactt 41669 Query: 423 ttgtctcctgtacaagttcttcacaatgaagcttactgtgaaacagatgcatggtttgtt 482 || ||||| |||||||||||||| |||||||| || || || |||||||| || ||| | Sbjct: 41670 ctgcctcctctacaagttcttcaccatgaagctcacggttaagcagatgcacggcttgct 41729 Query: 483 gaagcatcctgactc 497 |||||| |||||||| Sbjct: 41730 gaagcaccctgactc 41744
>gb|AC113338.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare clone OSJNBa0091J06 from chromosome 10, complete sequence Length = 141911 Score = 69.9 bits (35), Expect = 8e-09 Identities = 156/195 (80%), Gaps = 1/195 (0%) Strand = Plus / Minus Query: 304 tacttcaaggagctctacaggatgaagacctatcatgaggtcattgacgagatctataac 363 |||||||||||||| |||||| | ||||| || || |||||||| ||| |||||| ||| Sbjct: 17976 tacttcaaggagctgtacaggcttaagacgtaccacgaggtcatcaacgtgatctacaac 17917 Query: 364 caagttgatcatgtggagccttggatgactgg-caattgcaggggtccttccactgcatt 422 || ||||| || || |||| |||||||| || ||| ||| | || || |||| | || Sbjct: 17916 caggttgaccacgtcgagcaatggatgaccgggcaactgctgtggcccctccagcgactt 17857 Query: 423 ttgtctcctgtacaagttcttcacaatgaagcttactgtgaaacagatgcatggtttgtt 482 || ||||| |||||||||||||| |||||||| || || || |||||||| || ||| | Sbjct: 17856 ctgcctcctctacaagttcttcaccatgaagctcacggttaagcagatgcacggcttgct 17797 Query: 483 gaagcatcctgactc 497 |||||| |||||||| Sbjct: 17796 gaagcaccctgactc 17782
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 69.9 bits (35), Expect = 8e-09 Identities = 156/195 (80%), Gaps = 1/195 (0%) Strand = Plus / Minus Query: 304 tacttcaaggagctctacaggatgaagacctatcatgaggtcattgacgagatctataac 363 |||||||||||||| |||||| | ||||| || || |||||||| ||| |||||| ||| Sbjct: 11324905 tacttcaaggagctgtacaggcttaagacgtaccacgaggtcatcaacgtgatctacaac 11324846 Query: 364 caagttgatcatgtggagccttggatgactgg-caattgcaggggtccttccactgcatt 422 || ||||| || || |||| |||||||| || ||| ||| | || || |||| | || Sbjct: 11324845 caggttgaccacgtcgagcaatggatgaccgggcaactgctgtggcccctccagcgactt 11324786 Query: 423 ttgtctcctgtacaagttcttcacaatgaagcttactgtgaaacagatgcatggtttgtt 482 || ||||| |||||||||||||| |||||||| || || || |||||||| || ||| | Sbjct: 11324785 ctgcctcctctacaagttcttcaccatgaagctcacggttaagcagatgcacggcttgct 11324726 Query: 483 gaagcatcctgactc 497 |||||| |||||||| Sbjct: 11324725 gaagcaccctgactc 11324711
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 69.9 bits (35), Expect = 8e-09 Identities = 156/195 (80%), Gaps = 1/195 (0%) Strand = Plus / Minus Query: 304 tacttcaaggagctctacaggatgaagacctatcatgaggtcattgacgagatctataac 363 |||||||||||||| |||||| | ||||| || || |||||||| ||| |||||| ||| Sbjct: 11331345 tacttcaaggagctgtacaggcttaagacgtaccacgaggtcatcaacgtgatctacaac 11331286 Query: 364 caagttgatcatgtggagccttggatgactgg-caattgcaggggtccttccactgcatt 422 || ||||| || || |||| |||||||| || ||| ||| | || || |||| | || Sbjct: 11331285 caggttgaccacgtcgagcaatggatgaccgggcaactgctgtggcccctccagcgactt 11331226 Query: 423 ttgtctcctgtacaagttcttcacaatgaagcttactgtgaaacagatgcatggtttgtt 482 || ||||| |||||||||||||| |||||||| || || || |||||||| || ||| | Sbjct: 11331225 ctgcctcctctacaagttcttcaccatgaagctcacggttaagcagatgcacggcttgct 11331166 Query: 483 gaagcatcctgactc 497 |||||| |||||||| Sbjct: 11331165 gaagcaccctgactc 11331151
>gb|BT018810.1| Zea mays clone EL01N0530C10.d mRNA sequence Length = 1699 Score = 67.9 bits (34), Expect = 3e-08 Identities = 136/170 (80%) Strand = Plus / Plus Query: 304 tacttcaaggagctctacaggatgaagacctatcatgaggtcattgacgagatctataac 363 |||||||||||||||| || | |||||||| || |||||| | ||||||||||| ||| Sbjct: 246 tacttcaaggagctcttcaagtacaagacctaccacgaggtcgtcgacgagatctacaac 305 Query: 364 caagttgatcatgtggagccttggatgactggcaattgcaggggtccttccactgcattt 423 || || || || || ||||| |||||||| ||||| ||| | || || ||| | || || Sbjct: 306 caggtggaccacgtcgagccctggatgaccggcaactgccgcggcccctcctccgccttc 365 Query: 424 tgtctcctgtacaagttcttcacaatgaagcttactgtgaaacagatgca 473 || ||||| |||||||| ||||| |||||||| || || || |||||||| Sbjct: 366 tgcctcctctacaagttattcaccatgaagctcaccgtcaagcagatgca 415
>ref|NM_196136.1| Oryza sativa (japonica cultivar-group) hypothetical protein (OJ1341F06.10), mRNA Length = 267 Score = 50.1 bits (25), Expect = 0.007 Identities = 122/153 (79%), Gaps = 1/153 (0%) Strand = Plus / Plus Query: 304 tacttcaaggagctctacaggatgaagacctatcatgaggtcattgacgagatctataac 363 |||||||||||||| |||||| | ||||| || || |||||||| ||| |||||| ||| Sbjct: 106 tacttcaaggagctgtacaggcttaagacgtaccacgaggtcatcaacgtgatctacaac 165 Query: 364 caagttgatcatgtggagccttggatgactgg-caattgcaggggtccttccactgcatt 422 || ||||| || || |||| |||||||| || ||| ||| | || || |||| | || Sbjct: 166 caggttgaccacgtcgagcaatggatgaccgggcaactgctgtggcccctccagcgactt 225 Query: 423 ttgtctcctgtacaagttcttcacaatgaagct 455 || ||||| |||||||||||||| |||||||| Sbjct: 226 ctgcctcctctacaagttcttcaccatgaagct 258
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 46.1 bits (23), Expect = 0.11 Identities = 50/59 (84%) Strand = Plus / Minus Query: 340 gaggtcattgacgagatctataaccaagttgatcatgtggagccttggatgactggcaa 398 |||||||| ||||||||||| ||| | | ||| || || ||||| |||||||||||||| Sbjct: 6421736 gaggtcatcgacgagatctacaactaggctgaccacgttgagccatggatgactggcaa 6421678
>emb|AL662965.3|OSJN00167 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0040D17, complete sequence Length = 147548 Score = 46.1 bits (23), Expect = 0.11 Identities = 50/59 (84%) Strand = Plus / Minus Query: 340 gaggtcattgacgagatctataaccaagttgatcatgtggagccttggatgactggcaa 398 |||||||| ||||||||||| ||| | | ||| || || ||||| |||||||||||||| Sbjct: 83885 gaggtcatcgacgagatctacaactaggctgaccacgttgagccatggatgactggcaa 83827
>gb|AC150644.4| Bos taurus BAC CH240-223I2 (Children's Hospital Oakland Research Institute Bovine BAC Library (male)) complete sequence Length = 199501 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Plus Query: 99 gagttcatcctctacagagagt 120 |||||||||||||||||||||| Sbjct: 167619 gagttcatcctctacagagagt 167640
>dbj|AB231882.1| Scolionema suvaense gene for zinc finger protein Ssu-Zic, complete cds Length = 46150 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Plus Query: 356 tctataaccaagttgatcatgt 377 |||||||||||||||||||||| Sbjct: 12651 tctataaccaagttgatcatgt 12672
>emb|AL160163.24| Human DNA sequence from clone RP5-973N23 on chromosome 6p12.3-21.2 Contains the TRFP gene for TRF-proximal protein, the BYSL gene for bystin-like protein, the CCDN3 gene for cyclin D3, the 5' end of USP49 gene for ubiquitin specific protease 49 and 3 CpG islands, complete sequence Length = 116506 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 297 ttctgattacttcaaggagct 317 ||||||||||||||||||||| Sbjct: 94182 ttctgattacttcaaggagct 94162
>dbj|AK095253.1| Homo sapiens cDNA FLJ37934 fis, clone CTONG2005265, highly similar to BYSTIN Length = 3252 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 297 ttctgattacttcaaggagct 317 ||||||||||||||||||||| Sbjct: 2364 ttctgattacttcaaggagct 2344
>emb|CT030736.8| Mouse DNA sequence from clone RP23-396K21 on chromosome 16, complete sequence Length = 181320 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 399 ttgcaggggtccttccactgc 419 ||||||||||||||||||||| Sbjct: 49153 ttgcaggggtccttccactgc 49173
>gb|AC140791.4| Gallus gallus BAC clone TAM33-20G4 from chromosome ul, complete sequence Length = 219854 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 407 gtccttccactgcattttgtc 427 ||||||||||||||||||||| Sbjct: 122901 gtccttccactgcattttgtc 122921
>gb|AC117715.10| Mus musculus chromosome 7, clone RP23-62M19, complete sequence Length = 234594 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 463 aaacagatgcatggtttgttg 483 ||||||||||||||||||||| Sbjct: 40103 aaacagatgcatggtttgttg 40123
>gb|AY751779.1| Plantago mottle virus putative movement protein, polyprotein, and coat protein genes, complete cds Length = 6154 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 343 gtcattgacgagatctataa 362 |||||||||||||||||||| Sbjct: 3053 gtcattgacgagatctataa 3072
>gb|AC102540.7| Mus musculus chromosome 3, clone RP23-98H24, complete sequence Length = 207497 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 419 cattttgtctcctgtacaag 438 |||||||||||||||||||| Sbjct: 200119 cattttgtctcctgtacaag 200100
>ref|XM_415627.1| PREDICTED: Gallus gallus similar to unc-13 homolog D (LOC417369), mRNA Length = 3906 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 311 aggagctctacaggatgaag 330 |||||||||||||||||||| Sbjct: 2330 aggagctctacaggatgaag 2349
>ref|XM_654390.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN1878.2), mRNA Length = 4932 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 26 ccatctccggcgatcctcccagct 49 ||||||||||| |||||||||||| Sbjct: 2102 ccatctccggccatcctcccagct 2079
>gb|AC118595.6| Mus musculus chromosome 3, clone RP24-481I21, complete sequence Length = 248188 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 419 cattttgtctcctgtacaag 438 |||||||||||||||||||| Sbjct: 45816 cattttgtctcctgtacaag 45797
>emb|AL591033.5| Human DNA sequence from clone RP11-94L3 on chromosome 6, complete sequence Length = 17750 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 220 tgaaatatggagatacagac 239 |||||||||||||||||||| Sbjct: 2596 tgaaatatggagatacagac 2615
>emb|AL355343.18| Human DNA sequence from clone RP11-455I14 on chromosome 6 Contains the 5' end of the TIAM2 gene for T-cell lymphoma invasion and metastasis 2 (SIF and Tiam 1-like exchange factor (STEF)), complete sequence Length = 179262 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 435 caagttcttcacaatgaagc 454 |||||||||||||||||||| Sbjct: 41040 caagttcttcacaatgaagc 41021
>emb|AL353898.10| Human DNA sequence from clone RP4-758J24 on chromosome 1p32.1-33 Contains a novel gene, thecytochrome c oxidase subunit VIIb (COX7B) pseudogene, a C1orf8 gene for chromosome 1 open reading frame 8 and a novel gene (FLJ32112), complete sequence Length = 97375 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 264 gatggagaaggttctttgta 283 |||||||||||||||||||| Sbjct: 65437 gatggagaaggttctttgta 65456
>emb|AL645795.3| Zebrafish DNA sequence from clone BUSM1-31B14 in linkage group 6 Contains the hoxa10b, hoxa9b and hoxa2b genes for homeo box proteins, a novel gene for a protein similar to SRC-associated adaptor protein and a CpG island, complete sequence Length = 78000 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 459 tgtgaaacagatgcatggtttgtt 482 ||||||||||||||||||| |||| Sbjct: 43948 tgtgaaacagatgcatggtctgtt 43971
>emb|AL445065.1|TACID3 Thermoplasma acidophilum complete genome; segment 3/5 Length = 316900 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 308 tcaaggagctctacaggatg 327 |||||||||||||||||||| Sbjct: 197167 tcaaggagctctacaggatg 197148
>gb|CP000264.1| Jannaschia sp. CCS1, complete genome Length = 4317977 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 66 catcacaccctccgccgtcgccga 89 |||||||| ||||||||||||||| Sbjct: 2590156 catcacacgctccgccgtcgccga 2590179
>gb|AC007872.3| The sequence of an Aspergillus parasiticus cosmid containing spermidine synthase, complete sequence Length = 33952 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 230 agatacagacttcaggaaagccca 253 |||| ||||||||||||||||||| Sbjct: 29221 agatgcagacttcaggaaagccca 29244
>emb|AL805952.11| Mouse DNA sequence from clone RP23-125H10 on chromosome 4, complete sequence Length = 199540 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 288 tattctttcttctgattact 307 |||||||||||||||||||| Sbjct: 9621 tattctttcttctgattact 9640
>emb|AL732563.5| Mouse DNA sequence from clone RP23-209M8 on chromosome 4, complete sequence Length = 199818 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 288 tattctttcttctgattact 307 |||||||||||||||||||| Sbjct: 184066 tattctttcttctgattact 184085 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,184,259 Number of Sequences: 3902068 Number of extensions: 4184259 Number of successful extensions: 91297 Number of sequences better than 10.0: 46 Number of HSP's better than 10.0 without gapping: 46 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 90893 Number of HSP's gapped (non-prelim): 393 length of query: 502 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 480 effective length of database: 17,147,199,772 effective search space: 8230655890560 effective search space used: 8230655890560 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)