ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal8l13
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_190603.1| Oryza sativa (japonica cultivar-group), predic... 250 4e-63
2dbj|AK101230.1| Oryza sativa (japonica cultivar-group) cDNA clon... 250 4e-63
3dbj|AK069425.1| Oryza sativa (japonica cultivar-group) cDNA clon... 242 9e-61
4dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 101 2e-18
5dbj|AB193551.1| Triticum aestivum WP5CS mRNA for delta1-pyrrolin... 101 2e-18
6dbj|AP004127.1| Oryza sativa (japonica cultivar-group) genomic D... 101 2e-18
7dbj|AK064210.1| Oryza sativa (japonica cultivar-group) cDNA clon... 96 1e-16
8gb|AY888045.1| Triticum aestivum delta 1-pyrroline-5-carboxylate... 94 5e-16
9gb|AC111016.2| Oryza sativa (japonica cultivar-group) chromosome... 52 0.002
10dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 52 0.002
11dbj|AK102633.1| Oryza sativa (japonica cultivar-group) cDNA clon... 52 0.002
12dbj|AK101985.1| Oryza sativa (japonica cultivar-group) cDNA clon... 52 0.002
13dbj|D49714.1| Oryza sativa mRNA for deltal-pyrroline-5-carboxyla... 52 0.002
14gb|AY574031.1| Oryza sativa (japonica cultivar-group) delta-1-py... 50 0.007
15dbj|AK111149.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.10
16emb|AL591496.13| Mouse DNA sequence from clone RP23-384C18 on ch... 44 0.41
17gb|AC002121.1| Genomic sequence from Mouse 11, complete sequence 44 0.41
18ref|NM_138659.1| Mus musculus pre-mRNA processing factor 8 (Prpf... 44 0.41
19dbj|AK144232.1| Mus musculus nullipotent stem cell CRL-2070 NE c... 44 0.41
20dbj|AK041017.1| Mus musculus adult male aorta and vein cDNA, RIK... 44 0.41
21dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete ... 44 0.41
22dbj|AK060848.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.41
23gb|AF067967.1|AF067967 Mesembryanthemum crystallinum pyrroline-5... 44 0.41
24dbj|AB047391.1| Mus musculus Prp8 mRNA for pre-mRNA processing 8... 44 0.41
25gb|CP000096.1| Pelodictyon luteolum DSM 273, complete genome 42 1.6
26gb|AC147802.2| Oryza sativa chromosome 3 BAC OSJNBb0013C14 genom... 42 1.6
27gb|AC147803.2| Oryza sativa chromosome 3 BAC OSJNBb0034P05 genom... 42 1.6
28gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 42 1.6
29emb|CR555307.1| Azoarcus sp. EbN1 plasmid 1 42 1.6
30emb|CR555306.1| Azoarcus sp. EbN1 complete genome 42 1.6
31gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome 42 1.6
32gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome 42 1.6
33gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete g... 42 1.6
34dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
35gb|AF314811.1|AF314811 Brassica napus delta 1-pyrroline-5-carbox... 42 1.6
36gb|AY986977.1| Xanthomonas campestris pv. pelargonii phage Xp15,... 42 1.6
37dbj|AP006620.1| Nocardia farcinica IFM 10152 plasmid pNF2 DNA, c... 42 1.6
38dbj|AK106105.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.6
39dbj|AK065159.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.6
40gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome 42 1.6
41ref|NM_129539.2| Arabidopsis thaliana P5CS1 (DELTA1-PYRROLINE-5-... 40 6.4
42gb|AY804246.1| Chorispora bungeana delta-1-pyrroline 5-carboxyla... 40 6.4
43gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence 40 6.4
44gb|AC129189.3| Mus musculus BAC clone RP24-67O22 from chromosome... 40 6.4
45gb|DQ226946.1| Boechera divaricarpa isolate AD-C9 mRNA sequence 40 6.4
46emb|AL359253.17| Human DNA sequence from clone RP11-428L19 on ch... 40 6.4
47gb|AC138772.4| Homo sapiens BAC clone RP11-1345A16 from UL, comp... 40 6.4
48gb|AY150430.1| Arabidopsis thaliana delta-1-pyrroline 5-carboxyl... 40 6.4
49emb|X87330.1|ATP5COSMR A.thaliana mRNA for pyrroline-5-carboxyla... 40 6.4
50emb|X86777.1|ATP5CSAGN A.thaliana mRNA for pyrroline-5-carboxyla... 40 6.4
51gb|AY080771.1| Arabidopsis thaliana putative delta-1-pyrroline 5... 40 6.4
52emb|AL929495.21| Zebrafish DNA sequence from clone CH211-136M16 ... 40 6.4
53gb|AC101771.11| Mus musculus chromosome 15, clone RP24-104H19, c... 40 6.4
54gb|AC151734.3| Mus musculus BAC clone RP23-22O15 from chromosome... 40 6.4
55gb|AY113046.1| Arabidopsis thaliana At2g39800/T5I7.10 mRNA, comp... 40 6.4
56gb|AC069262.24| Homo sapiens 12 BAC RP11-753B7 (Roswell Park Can... 40 6.4
57gb|AF424633.1|AF424633 Arabidopsis thaliana At2g39800/T5I7.10 mR... 40 6.4
58dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.4
59dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.4
60gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome 40 6.4
61dbj|D32138.1|ATHATP5CS Arabidopsis thaliana mRNA for delta1-pyrr... 40 6.4
62dbj|AP005721.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.4
63gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 40 6.4
64emb|BX000497.1|CNS08CDN Oryza sativa chromosome 11, . BAC OSJNBa... 40 6.4 
>ref|NM_190603.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2208

 Score =  250 bits (126), Expect = 4e-63
 Identities = 237/274 (86%)
 Strand = Plus / Plus

                                                                       
Query: 199 ggcggacctcgagaacagcgactccacccgctgcttcgtcagggacgtcaagcgcatcgt 258
           ||||||| | ||||||| ||||||||||||| ||||||||| |||||| ||||||||| |
Sbjct: 51  ggcggacgtggagaacaccgactccacccgcggcttcgtcaaggacgtgaagcgcatcat 110

                                                                       
Query: 259 cgtcaaggtcggcaccgctgttgtcaccgggcagaatggccgactcgccatgggcaggct 318
           | |||||||||||||||||||||| || |||| |||||||||  | || |||||||||||
Sbjct: 111 catcaaggtcggcaccgctgttgtgactgggccgaatggccggttggctatgggcaggct 170

                                                                       
Query: 319 cggagctctctgcgagcaggtgaaggagcttaatttccaggggtatgaggtgatcctggt 378
           ||| ||||| || || ||||||||| |||| |||||  ||||||| |||||||| |||||
Sbjct: 171 cggtgctctgtgtgaacaggtgaagcagctaaattttgaggggtacgaggtgattctggt 230

                                                                       
Query: 379 cacctccggcgccgttggcgtcgggaggcagaggctcaagtaccggaagctaatcaacag 438
           |||||| || || ||||| || |||||||||||||||||||||||||||||  |||| ||
Sbjct: 231 cacctctggtgctgttggtgttgggaggcagaggctcaagtaccggaagctcgtcaatag 290

                                             
Query: 439 cagctttgcggatctgcagaacccacagttggac 472
           ||| || || |||||||||||||||||| |||||
Sbjct: 291 cagtttcgctgatctgcagaacccacagatggac 324
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>dbj|AK101230.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033031H21, full
           insert sequence
          Length = 2739

 Score =  250 bits (126), Expect = 4e-63
 Identities = 237/274 (86%)
 Strand = Plus / Plus

                                                                       
Query: 199 ggcggacctcgagaacagcgactccacccgctgcttcgtcagggacgtcaagcgcatcgt 258
           ||||||| | ||||||| ||||||||||||| ||||||||| |||||| ||||||||| |
Sbjct: 241 ggcggacgtggagaacaccgactccacccgcggcttcgtcaaggacgtgaagcgcatcat 300

                                                                       
Query: 259 cgtcaaggtcggcaccgctgttgtcaccgggcagaatggccgactcgccatgggcaggct 318
           | |||||||||||||||||||||| || |||| |||||||||  | || |||||||||||
Sbjct: 301 catcaaggtcggcaccgctgttgtgactgggccgaatggccggttggctatgggcaggct 360

                                                                       
Query: 319 cggagctctctgcgagcaggtgaaggagcttaatttccaggggtatgaggtgatcctggt 378
           ||| ||||| || || ||||||||| |||| |||||  ||||||| |||||||| |||||
Sbjct: 361 cggtgctctgtgtgaacaggtgaagcagctaaattttgaggggtacgaggtgattctggt 420

                                                                       
Query: 379 cacctccggcgccgttggcgtcgggaggcagaggctcaagtaccggaagctaatcaacag 438
           |||||| || || ||||| || |||||||||||||||||||||||||||||  |||| ||
Sbjct: 421 cacctctggtgctgttggtgttgggaggcagaggctcaagtaccggaagctcgtcaatag 480

                                             
Query: 439 cagctttgcggatctgcagaacccacagttggac 472
           ||| || || |||||||||||||||||| |||||
Sbjct: 481 cagtttcgctgatctgcagaacccacagatggac 514
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>dbj|AK069425.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023019K03, full
           insert sequence
          Length = 3386

 Score =  242 bits (122), Expect = 9e-61
 Identities = 236/274 (86%)
 Strand = Plus / Plus

                                                                       
Query: 199 ggcggacctcgagaacagcgactccacccgctgcttcgtcagggacgtcaagcgcatcgt 258
           ||||||| | ||||||| ||||||||||||| ||||||||| |||||| ||||||||| |
Sbjct: 185 ggcggacgtggagaacaccgactccacccgcggcttcgtcaaggacgtgaagcgcatcat 244

                                                                       
Query: 259 cgtcaaggtcggcaccgctgttgtcaccgggcagaatggccgactcgccatgggcaggct 318
           | |||||||||||||||||||||| || |||| || ||||||  | || |||||||||||
Sbjct: 245 catcaaggtcggcaccgctgttgtgactgggccgattggccggttggctatgggcaggct 304

                                                                       
Query: 319 cggagctctctgcgagcaggtgaaggagcttaatttccaggggtatgaggtgatcctggt 378
           ||| ||||| || || ||||||||| |||| |||||  ||||||| |||||||| |||||
Sbjct: 305 cggtgctctgtgtgaacaggtgaagcagctaaattttgaggggtacgaggtgattctggt 364

                                                                       
Query: 379 cacctccggcgccgttggcgtcgggaggcagaggctcaagtaccggaagctaatcaacag 438
           |||||| || || ||||| || |||||||||||||||||||||||||||||  |||| ||
Sbjct: 365 cacctctggtgctgttggtgttgggaggcagaggctcaagtaccggaagctcgtcaatag 424

                                             
Query: 439 cagctttgcggatctgcagaacccacagttggac 472
           ||| || || |||||||||||||||||| |||||
Sbjct: 425 cagtttcgctgatctgcagaacccacagatggac 458
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  101 bits (51), Expect = 2e-18
 Identities = 84/95 (88%)
 Strand = Plus / Plus

                                                                            
Query: 335      caggtgaaggagcttaatttccaggggtatgaggtgatcctggtcacctccggcgccgtt 394
                ||||||||| |||| |||||  ||||||| |||||||| ||||||||||| || || |||
Sbjct: 36425380 caggtgaagcagctaaattttgaggggtacgaggtgattctggtcacctctggtgctgtt 36425439

                                                   
Query: 395      ggcgtcgggaggcagaggctcaagtaccggaagct 429
                || || |||||||||||||||||||||||||||||
Sbjct: 36425440 ggtgttgggaggcagaggctcaagtaccggaagct 36425474



 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 61/69 (88%)
 Strand = Plus / Plus

                                                                            
Query: 199      ggcggacctcgagaacagcgactccacccgctgcttcgtcagggacgtcaagcgcatcgt 258
                ||||||| | ||||||| ||||||||||||| ||||||||| |||||| ||||||||| |
Sbjct: 36424476 ggcggacgtggagaacaccgactccacccgcggcttcgtcaaggacgtgaagcgcatcat 36424535

                         
Query: 259      cgtcaaggt 267
                | |||||||
Sbjct: 36424536 catcaaggt 36424544



 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 56/64 (87%)
 Strand = Plus / Plus

                                                                            
Query: 264      aggtcggcaccgctgttgtcaccgggcagaatggccgactcgccatgggcaggctcggag 323
                ||||||||||||||||||| || |||| |||||||||  | || |||||||||||||| |
Sbjct: 36425210 aggtcggcaccgctgttgtgactgggccgaatggccggttggctatgggcaggctcggtg 36425269

                    
Query: 324      ctct 327
                ||||
Sbjct: 36425270 ctct 36425273



 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 449      gatctgcagaacccacagttggac 472
                |||||||||||||||||| |||||
Sbjct: 36425574 gatctgcagaacccacagatggac 36425597
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>dbj|AB193551.1| Triticum aestivum WP5CS mRNA for delta1-pyrroline-5-carboxylate
           synthetase, complete cds
          Length = 2405

 Score =  101 bits (51), Expect = 2e-18
 Identities = 135/163 (82%)
 Strand = Plus / Plus

                                                                       
Query: 309 tgggcaggctcggagctctctgcgagcaggtgaaggagcttaatttccaggggtatgagg 368
           |||||||| | ||||| || ||||||||||| ||||| ||||||   || || |||||||
Sbjct: 186 tgggcaggattggagccctgtgcgagcaggtcaaggatcttaatgctcaaggatatgagg 245

                                                                       
Query: 369 tgatcctggtcacctccggcgccgttggcgtcgggaggcagaggctcaagtaccggaagc 428
           ||||  |||||||||| ||||| ||||| || ||| | ||| |||||| |||||| ||||
Sbjct: 246 tgattatggtcacctcgggcgctgttggtgtggggcgacagcggctcaggtaccgcaagc 305

                                                      
Query: 429 taatcaacagcagctttgcggatctgcagaacccacagttgga 471
           |  |||| ||||||||||| ||||||||||| |||||| ||||
Sbjct: 306 tcgtcaatagcagctttgctgatctgcagaagccacagatgga 348
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>dbj|AP004127.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1,
             clone:P0005H10
          Length = 142885

 Score =  101 bits (51), Expect = 2e-18
 Identities = 84/95 (88%)
 Strand = Plus / Plus

                                                                         
Query: 335   caggtgaaggagcttaatttccaggggtatgaggtgatcctggtcacctccggcgccgtt 394
             ||||||||| |||| |||||  ||||||| |||||||| ||||||||||| || || |||
Sbjct: 77219 caggtgaagcagctaaattttgaggggtacgaggtgattctggtcacctctggtgctgtt 77278

                                                
Query: 395   ggcgtcgggaggcagaggctcaagtaccggaagct 429
             || || |||||||||||||||||||||||||||||
Sbjct: 77279 ggtgttgggaggcagaggctcaagtaccggaagct 77313



 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 61/69 (88%)
 Strand = Plus / Plus

                                                                         
Query: 199   ggcggacctcgagaacagcgactccacccgctgcttcgtcagggacgtcaagcgcatcgt 258
             ||||||| | ||||||| ||||||||||||| ||||||||| |||||| ||||||||| |
Sbjct: 76315 ggcggacgtggagaacaccgactccacccgcggcttcgtcaaggacgtgaagcgcatcat 76374

                      
Query: 259   cgtcaaggt 267
             | |||||||
Sbjct: 76375 catcaaggt 76383



 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 56/64 (87%)
 Strand = Plus / Plus

                                                                         
Query: 264   aggtcggcaccgctgttgtcaccgggcagaatggccgactcgccatgggcaggctcggag 323
             ||||||||||||||||||| || |||| |||||||||  | || |||||||||||||| |
Sbjct: 77049 aggtcggcaccgctgttgtgactgggccgaatggccggttggctatgggcaggctcggtg 77108

                 
Query: 324   ctct 327
             ||||
Sbjct: 77109 ctct 77112



 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 449   gatctgcagaacccacagttggac 472
             |||||||||||||||||| |||||
Sbjct: 77413 gatctgcagaacccacagatggac 77436
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>dbj|AK064210.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-104-E10, full
            insert sequence
          Length = 2521

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 93/107 (86%), Gaps = 2/107 (1%)
 Strand = Plus / Minus

                                                                        
Query: 335  caggtgaaggagcttaatttccaggggtatgaggtgatcctggtcacctccggcgccgtt 394
            ||||||||| |||| |||||  ||||||| |||||||| ||||||||||  || || |||
Sbjct: 2158 caggtgaagcagctaaattttgaggggtacgaggtgattctggtcacct--ggtgctgtt 2101

                                                           
Query: 395  ggcgtcgggaggcagaggctcaagtaccggaagctaatcaacagcag 441
            || || |||||||||||||||||||||||||||||  ||||||||||
Sbjct: 2100 ggtgttgggaggcagaggctcaagtaccggaagctcgtcaacagcag 2054



 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 56/64 (87%)
 Strand = Plus / Minus

                                                                        
Query: 264  aggtcggcaccgctgttgtcaccgggcagaatggccgactcgccatgggcaggctcggag 323
            ||||||||||||||||||| || |||| |||||||||  | || |||||||||||||| |
Sbjct: 2328 aggtcggcaccgctgttgtgactgggccgaatggccggttggctatgggcaggctcggtg 2269

                
Query: 324  ctct 327
            ||||
Sbjct: 2268 ctct 2265



 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 449  gatctgcagaacccacagttggac 472
            |||||||||||||||||| |||||
Sbjct: 1966 gatctgcagaacccacagatggac 1943
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>gb|AY888045.1| Triticum aestivum delta 1-pyrroline-5-carboxylate synthetase mRNA,
           complete cds
          Length = 2260

 Score = 93.7 bits (47), Expect = 5e-16
 Identities = 134/163 (82%)
 Strand = Plus / Plus

                                                                       
Query: 309 tgggcaggctcggagctctctgcgagcaggtgaaggagcttaatttccaggggtatgagg 368
           |||||||| | ||||| || ||||||||||| ||||| ||||||   || || |||||||
Sbjct: 212 tgggcaggattggagccctgtgcgagcaggtcaaggatcttaatgctcaaggatatgagg 271

                                                                       
Query: 369 tgatcctggtcacctccggcgccgttggcgtcgggaggcagaggctcaagtaccggaagc 428
           ||||  |||||||||| ||||| || || || ||| | ||| |||||| |||||||||||
Sbjct: 272 tgattatggtcacctcgggcgctgtcggtgtggggcgacagcggctcaggtaccggaagc 331

                                                      
Query: 429 taatcaacagcagctttgcggatctgcagaacccacagttgga 471
           |  |||| ||||||||||| |||||||| || |||||| ||||
Sbjct: 332 ttgtcaatagcagctttgctgatctgcaaaagccacagatgga 374
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>gb|AC111016.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1651_D06,
             complete sequence
          Length = 145323

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 47/54 (87%)
 Strand = Plus / Minus

                                                                   
Query: 418   gtaccggaagctaatcaacagcagctttgcggatctgcagaacccacagttgga 471
             ||||||||||||  |||| ||||||||||| |||||||| || |||||| ||||
Sbjct: 77715 gtaccggaagcttgtcaatagcagctttgctgatctgcaaaagccacagatgga 77662
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 47/54 (87%)
 Strand = Plus / Minus

                                                                      
Query: 418      gtaccggaagctaatcaacagcagctttgcggatctgcagaacccacagttgga 471
                ||||||||||||  |||| ||||||||||| |||||||| || |||||| ||||
Sbjct: 22234450 gtaccggaagcttgtcaatagcagctttgctgatctgcaaaagccacagatgga 22234397
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>dbj|AK102633.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033099M14, full
           insert sequence
          Length = 2767

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 47/54 (87%)
 Strand = Plus / Plus

                                                                 
Query: 418 gtaccggaagctaatcaacagcagctttgcggatctgcagaacccacagttgga 471
           ||||||||||||  |||| ||||||||||| |||||||| || |||||| ||||
Sbjct: 331 gtaccggaagcttgtcaatagcagctttgctgatctgcaaaagccacagatgga 384
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>dbj|AK101985.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033078N24, full
           insert sequence
          Length = 1821

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 47/54 (87%)
 Strand = Plus / Plus

                                                                 
Query: 418 gtaccggaagctaatcaacagcagctttgcggatctgcagaacccacagttgga 471
           ||||||||||||  |||| ||||||||||| |||||||| || |||||| ||||
Sbjct: 331 gtaccggaagcttgtcaatagcagctttgctgatctgcaaaagccacagatgga 384
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>dbj|D49714.1| Oryza sativa mRNA for deltal-pyrroline-5-carboxylate synthetase,
           complete cds
          Length = 2549

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 47/54 (87%)
 Strand = Plus / Plus

                                                                 
Query: 418 gtaccggaagctaatcaacagcagctttgcggatctgcagaacccacagttgga 471
           ||||||||||||  |||| ||||||||||| |||||||| || |||||| ||||
Sbjct: 311 gtaccggaagcttgtcaatagcagctttgctgatctgcaaaagccacagatgga 364
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>gb|AY574031.1| Oryza sativa (japonica cultivar-group)
           delta-1-pyrroline-5-carboxylate synthetase (P5CS) mRNA,
           complete cds
          Length = 2151

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 46/53 (86%)
 Strand = Plus / Plus

                                                                
Query: 419 taccggaagctaatcaacagcagctttgcggatctgcagaacccacagttgga 471
           |||||||||||  |||| ||||||||||| |||||||| || |||||| ||||
Sbjct: 214 taccggaagcttgtcaatagcagctttgctgatctgcaaaagccacagatgga 266



 Score = 46.1 bits (23), Expect = 0.10
 Identities = 92/115 (80%)
 Strand = Plus / Plus

                                                                       
Query: 231 gcttcgtcagggacgtcaagcgcatcgtcgtcaaggtcggcaccgctgttgtcaccgggc 290
           ||||||| |||||||| |||||| || || ||||||| ||||| || |||||| || | |
Sbjct: 26  gcttcgtgagggacgtgaagcgcgtcatcatcaaggtgggcactgcagttgtctccagac 85

                                                                  
Query: 291 agaatggccgactcgccatgggcaggctcggagctctctgcgagcaggtgaagga 345
           |  ||||  || | ||  |||||||| | |||||||| ||||||||||| |||||
Sbjct: 86  aagatggaagattggctttgggcagggttggagctctgtgcgagcaggttaagga 140
to top
>dbj|AK111149.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-176-F01, full
            insert sequence
          Length = 2737

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                   
Query: 249  agcgcatcgtcgtcaaggtcggc 271
            |||||||||||||||||||||||
Sbjct: 1381 agcgcatcgtcgtcaaggtcggc 1403
to top
>emb|AL591496.13| Mouse DNA sequence from clone RP23-384C18 on chromosome 11 Contains the
              3' end of a novel gene, five novel genes, the Serpinf1 and
              Serpinf2 genes for serine (or cysteine) proteinase
              inhibitor, clade F) members 1 and 2, an H+ transporting
              mitochondrial F0 complex ATP synthase subunit c (subunit 9)
              isoform 1 (Atp5g1) pseudogene, the Prpf8 gene for pre-mRNA
              processing factor 8, the gene for the ortholog of human
              scavenger receptor class F member 1 SCARF1, the 5' end of
              the gene for novel protein similar to solute carrier family
              43 member 1 Slc43a1 and seven CpG islands, complete
              sequence
          Length = 205633

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 216    gcgactccacccgctgcttcgt 237
              ||||||||||||||||||||||
Sbjct: 138406 gcgactccacccgctgcttcgt 138385
to top
>gb|AC002121.1| Genomic sequence from Mouse 11, complete sequence
          Length = 84056

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 216   gcgactccacccgctgcttcgt 237
             ||||||||||||||||||||||
Sbjct: 62144 gcgactccacccgctgcttcgt 62165
to top
>ref|NM_138659.1| Mus musculus pre-mRNA processing factor 8 (Prpf8), mRNA
          Length = 7143

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 216  gcgactccacccgctgcttcgt 237
            ||||||||||||||||||||||
Sbjct: 2079 gcgactccacccgctgcttcgt 2058
to top
>dbj|AK144232.1| Mus musculus nullipotent stem cell CRL-2070 NE cDNA, RIKEN
            full-length enriched library, clone:G430136B12
            product:pre-mRNA processing factor 8, full insert
            sequence
          Length = 3278

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 216  gcgactccacccgctgcttcgt 237
            ||||||||||||||||||||||
Sbjct: 2113 gcgactccacccgctgcttcgt 2092
to top
>dbj|AK041017.1| Mus musculus adult male aorta and vein cDNA, RIKEN full-length
            enriched library, clone:A530061L10 product:splicing
            factor PRP8-like (S. cerevisiae), full insert sequence
          Length = 2398

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 216  gcgactccacccgctgcttcgt 237
            ||||||||||||||||||||||
Sbjct: 2120 gcgactccacccgctgcttcgt 2099
to top
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 251    cgcatcgtcgtcaaggtcggcaccgc 276
              ||||||||||||||||||||| ||||
Sbjct: 461634 cgcatcgtcgtcaaggtcggctccgc 461659
to top
>dbj|AK060848.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-E05, full
           insert sequence
          Length = 1461

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 6   ccacccacctccaccttgacctcgcc 31
           |||||||||||||||| |||||||||
Sbjct: 325 ccacccacctccacctcgacctcgcc 350
to top
>gb|AF067967.1|AF067967 Mesembryanthemum crystallinum pyrroline-5-carboxylate synthetase
           (P5CS) mRNA, complete cds
          Length = 2992

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 37/42 (88%)
 Strand = Plus / Plus

                                                     
Query: 241 ggacgtcaagcgcatcgtcgtcaaggtcggcaccgctgttgt 282
           |||||| |||||| ||||||||||||| || || ||||||||
Sbjct: 221 ggacgttaagcgcgtcgtcgtcaaggttggaactgctgttgt 262
to top
>dbj|AB047391.1| Mus musculus Prp8 mRNA for pre-mRNA processing 8 protein, complete
            cds
          Length = 7143

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 216  gcgactccacccgctgcttcgt 237
            ||||||||||||||||||||||
Sbjct: 2079 gcgactccacccgctgcttcgt 2058
to top
>gb|CP000096.1| Pelodictyon luteolum DSM 273, complete genome
          Length = 2364842

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 254     atcgtcgtcaaggtcggcacc 274
               |||||||||||||||||||||
Sbjct: 1662694 atcgtcgtcaaggtcggcacc 1662714
to top
>gb|AC147802.2| Oryza sativa chromosome 3 BAC OSJNBb0013C14 genomic sequence, complete
              sequence
          Length = 132981

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 7      cacccacctccaccttgacctcgcc 31
              ||||||||||||||| |||||||||
Sbjct: 123273 cacccacctccacctcgacctcgcc 123249
to top
>gb|AC147803.2| Oryza sativa chromosome 3 BAC OSJNBb0034P05 genomic sequence,
            complete sequence
          Length = 35334

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 7    cacccacctccaccttgacctcgcc 31
            ||||||||||||||| |||||||||
Sbjct: 2794 cacccacctccacctcgacctcgcc 2770
to top
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                         
Query: 7        cacccacctccaccttgacctcgcc 31
                ||||||||||||||| |||||||||
Sbjct: 18218288 cacccacctccacctcgacctcgcc 18218264
to top
>emb|CR555307.1| Azoarcus sp. EbN1 plasmid 1
          Length = 207355

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 442    ctttgcggatctgcagaaccc 462
              |||||||||||||||||||||
Sbjct: 204758 ctttgcggatctgcagaaccc 204778
to top
>emb|CR555306.1| Azoarcus sp. EbN1 complete genome
          Length = 4296230

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 245    gtcaagcgcatcgtcgtcaag 265
              |||||||||||||||||||||
Sbjct: 907417 gtcaagcgcatcgtcgtcaag 907397



 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 264     aggtcggcaccgctgttgtc 283
               ||||||||||||||||||||
Sbjct: 3700574 aggtcggcaccgctgttgtc 3700555
to top
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome
          Length = 5513844

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 251    cgcatcgtcgtcaaggtcggc 271
              |||||||||||||||||||||
Sbjct: 174987 cgcatcgtcgtcaaggtcggc 175007
to top
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome
          Length = 5331656

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 251    cgcatcgtcgtcaaggtcggc 271
              |||||||||||||||||||||
Sbjct: 285145 cgcatcgtcgtcaaggtcggc 285165
to top
>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome
          Length = 2909809

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 250     gcgcatcgtcgtcaaggtcgg 270
               |||||||||||||||||||||
Sbjct: 1175885 gcgcatcgtcgtcaaggtcgg 1175905
to top
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                         
Query: 7        cacccacctccaccttgacctcgcc 31
                ||||||||||||||| |||||||||
Sbjct: 18211829 cacccacctccacctcgacctcgcc 18211805
to top
>gb|AF314811.1|AF314811 Brassica napus delta 1-pyrroline-5-carboxylate synthetase A mRNA,
           complete cds
          Length = 2551

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                    
Query: 242 gacgtcaagcgcatcgtcgtcaaggtcggcaccgctgttgt 282
           ||||||||||| |||||||| ||||| || || ||||||||
Sbjct: 130 gacgtcaagcgtatcgtcgttaaggttggaacagctgttgt 170



 Score = 40.1 bits (20), Expect = 6.4
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 432 tcaacagcagctttgcggatctgcagaa 459
           |||| ||||||||||||||||| |||||
Sbjct: 320 tcaatagcagctttgcggatctccagaa 347
to top
>gb|AY986977.1| Xanthomonas campestris pv. pelargonii phage Xp15, complete genome
          Length = 55770

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 243   acgtcaagcgcatcgtcgtca 263
             |||||||||||||||||||||
Sbjct: 50065 acgtcaagcgcatcgtcgtca 50085
to top
>dbj|AP006620.1| Nocardia farcinica IFM 10152 plasmid pNF2 DNA, complete sequence
          Length = 87093

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 250   gcgcatcgtcgtcaaggtcggcacc 274
             ||||||||||| |||||||||||||
Sbjct: 22138 gcgcatcgtcgacaaggtcggcacc 22114
to top
>dbj|AK106105.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-207-C11, full
           insert sequence
          Length = 1562

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 7   cacccacctccaccttgacctcgcc 31
           ||||||||||||||| |||||||||
Sbjct: 427 cacccacctccacctcgacctcgcc 451
to top
>dbj|AK065159.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002B24, full
           insert sequence
          Length = 1411

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 7   cacccacctccaccttgacctcgcc 31
           ||||||||||||||| |||||||||
Sbjct: 390 cacccacctccacctcgacctcgcc 414
to top
>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome
          Length = 3551823

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                            
Query: 365     gaggtgatcctggtcacctccggcgccgt 393
               |||||||| |||||| |||||||||||||
Sbjct: 1570608 gaggtgattctggtctcctccggcgccgt 1570636
to top
>ref|NM_129539.2| Arabidopsis thaliana P5CS1 (DELTA1-PYRROLINE-5-CARBOXYLATE SYNTHASE
           1) AT2G39800 (P5CS1) transcript variant AT2G39800.1
           mRNA, complete cds
          Length = 2886

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 432 tcaacagcagctttgcggatctgcagaa 459
           |||| ||||||||||||||||| |||||
Sbjct: 607 tcaatagcagctttgcggatcttcagaa 634
to top
>gb|AY804246.1| Chorispora bungeana delta-1-pyrroline 5-carboxylase synthetase
           mRNA, complete cds
          Length = 2181

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 432 tcaacagcagctttgcggatctgcagaa 459
           |||| ||||||||||||||||| |||||
Sbjct: 227 tcaatagcagctttgcggatcttcagaa 254
to top
>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence
          Length = 3694126

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 190    cgttgcggcggcggacctcg 209
              ||||||||||||||||||||
Sbjct: 764474 cgttgcggcggcggacctcg 764455
to top
>gb|AC129189.3| Mus musculus BAC clone RP24-67O22 from chromosome 15, complete sequence
          Length = 152947

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 351   atttccaggggtatgaggtg 370
             ||||||||||||||||||||
Sbjct: 87954 atttccaggggtatgaggtg 87935
to top
>gb|DQ226946.1| Boechera divaricarpa isolate AD-C9 mRNA sequence
          Length = 578

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 432 tcaacagcagctttgcggatctgcagaa 459
           |||| ||||||||||||||||| |||||
Sbjct: 334 tcaatagcagctttgcggatctccagaa 307
to top
>emb|AL359253.17| Human DNA sequence from clone RP11-428L19 on chromosome 9 Contains the
             5' end of the PCSK5 gene for proprotein convertase
             subtilisin/kexin type 5 and two CpG islands, complete
             sequence
          Length = 189608

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 39    cccgttctccctcgctccct 58
             ||||||||||||||||||||
Sbjct: 23009 cccgttctccctcgctccct 22990
to top
>gb|AC138772.4| Homo sapiens BAC clone RP11-1345A16 from UL, complete sequence
          Length = 213227

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 205  cctcgagaacagcgactcca 224
            ||||||||||||||||||||
Sbjct: 1765 cctcgagaacagcgactcca 1784
to top
>gb|AY150430.1| Arabidopsis thaliana delta-1-pyrroline 5-carboxylase synthetase
           (P5C1) (At2g39800) mRNA, complete cds
          Length = 2185

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 432 tcaacagcagctttgcggatctgcagaa 459
           |||| ||||||||||||||||| |||||
Sbjct: 227 tcaatagcagctttgcggatcttcagaa 254
to top
>emb|X87330.1|ATP5COSMR A.thaliana mRNA for pyrroline-5-carboxylate synthetase
          Length = 2584

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 432 tcaacagcagctttgcggatctgcagaa 459
           |||| ||||||||||||||||| |||||
Sbjct: 325 tcaatagcagctttgcggatcttcagaa 352
to top
>emb|X86777.1|ATP5CSAGN A.thaliana mRNA for pyrroline-5-carboxylate synthetase A
          Length = 2552

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 432 tcaacagcagctttgcggatctgcagaa 459
           |||| ||||||||||||||||| |||||
Sbjct: 299 tcaatagcagctttgcggatcttcagaa 326
to top
>gb|AY080771.1| Arabidopsis thaliana putative delta-1-pyrroline 5-carboxylase
           synthetase P5C1 (At2g39800) mRNA, complete cds
          Length = 2600

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 432 tcaacagcagctttgcggatctgcagaa 459
           |||| ||||||||||||||||| |||||
Sbjct: 346 tcaatagcagctttgcggatcttcagaa 373
to top
>emb|AL929495.21| Zebrafish DNA sequence from clone CH211-136M16 in linkage group 12,
             complete sequence
          Length = 157568

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 425   aagctaatcaacagcagctt 444
             ||||||||||||||||||||
Sbjct: 33293 aagctaatcaacagcagctt 33274
to top
>gb|AC101771.11| Mus musculus chromosome 15, clone RP24-104H19, complete sequence
          Length = 153992

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 351   atttccaggggtatgaggtg 370
             ||||||||||||||||||||
Sbjct: 47604 atttccaggggtatgaggtg 47585
to top
>gb|AC151734.3| Mus musculus BAC clone RP23-22O15 from chromosome 15, complete sequence
          Length = 229862

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 351    atttccaggggtatgaggtg 370
              ||||||||||||||||||||
Sbjct: 204820 atttccaggggtatgaggtg 204801
to top
>gb|AY113046.1| Arabidopsis thaliana At2g39800/T5I7.10 mRNA, complete cds
          Length = 2154

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 432 tcaacagcagctttgcggatctgcagaa 459
           |||| ||||||||||||||||| |||||
Sbjct: 227 tcaatagcagctttgcggatcttcagaa 254
to top
>gb|AC069262.24| Homo sapiens 12 BAC RP11-753B7 (Roswell Park Cancer Institute Human
            BAC Library) complete sequence
          Length = 190723

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 399  tcgggaggcagaggctcaag 418
            ||||||||||||||||||||
Sbjct: 7070 tcgggaggcagaggctcaag 7089
to top
>gb|AF424633.1|AF424633 Arabidopsis thaliana At2g39800/T5I7.10 mRNA, complete cds
          Length = 2630

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 432 tcaacagcagctttgcggatctgcagaa 459
           |||| ||||||||||||||||| |||||
Sbjct: 346 tcaatagcagctttgcggatcttcagaa 373
to top
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11,
              complete sequence
          Length = 28386948

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 30     cctcgcccacccgttctccctcgc 53
              |||||||||||| |||||||||||
Sbjct: 356006 cctcgcccaccccttctccctcgc 356029
to top
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 345     agcttaatttccaggggtat 364
               ||||||||||||||||||||
Sbjct: 2254985 agcttaatttccaggggtat 2255004
to top
>gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome
          Length = 3304561

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 294    atggccgactcgccatgggc 313
              ||||||||||||||||||||
Sbjct: 331082 atggccgactcgccatgggc 331101
to top
>dbj|D32138.1|ATHATP5CS Arabidopsis thaliana mRNA for delta1-pyrroline-5-carboxylate
           synthase, complete cds
          Length = 2571

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 432 tcaacagcagctttgcggatctgcagaa 459
           |||| ||||||||||||||||| |||||
Sbjct: 333 tcaatagcagctttgcggatcttcagaa 360
to top
>dbj|AP005721.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1123_E07
          Length = 113187

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 345   agcttaatttccaggggtat 364
             ||||||||||||||||||||
Sbjct: 41934 agcttaatttccaggggtat 41953
to top
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 30     cctcgcccacccgttctccctcgc 53
              |||||||||||| |||||||||||
Sbjct: 356006 cctcgcccaccccttctccctcgc 356029
to top
>emb|BX000497.1|CNS08CDN Oryza sativa chromosome 11, . BAC OSJNBa0010K05 of library OSJNBa from
             chromosome 11 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 164143

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 30    cctcgcccacccgttctccctcgc 53
             |||||||||||| |||||||||||
Sbjct: 63324 cctcgcccaccccttctccctcgc 63347


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,243,115
Number of Sequences: 3902068
Number of extensions: 3243115
Number of successful extensions: 111226
Number of sequences better than 10.0: 64
Number of HSP's better than 10.0 without gapping: 64
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 110471
Number of HSP's gapped (non-prelim): 755
length of query: 475
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 453
effective length of database: 17,147,199,772
effective search space: 7767681496716
effective search space used: 7767681496716
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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