ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal9a07
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1NALP2_HUMAN (Q9NX02) NACHT-, LRR- and PYD-containing protein 2 (... 29 3.0
2CLPP2_MYXXA (Q9X5N0) ATP-dependent Clp protease proteolytic subu... 28 5.1

>NALP2_HUMAN (Q9NX02) NACHT-, LRR- and PYD-containing protein 2 (PYRIN domain-|
           and NACHT domain-containing protein 1) (PYRIN-containing
           APAF1-like protein 2) (Nucleotide-binding site protein
           1)
          Length = 1062

 Score = 29.3 bits (64), Expect = 3.0
 Identities = 12/39 (30%), Positives = 21/39 (53%)
 Frame = -1

Query: 122 RAGYCCTGSNNRRRARQFHTSWGCQQLCDKRHDSTDCSI 6
           +AGY   G  N +RA++   ++GC+   D + +   C I
Sbjct: 552 QAGYYSFGLANEKRAKELEATFGCRMSPDIKQELLRCDI 590



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>CLPP2_MYXXA (Q9X5N0) ATP-dependent Clp protease proteolytic subunit 2 (EC|
           3.4.21.92) (Endopeptidase Clp 2)
          Length = 206

 Score = 28.5 bits (62), Expect = 5.1
 Identities = 15/58 (25%), Positives = 29/58 (50%)
 Frame = -3

Query: 183 AARSPLLLLVGAEGEAPSQMPCGILLHGQQQSQEGTSVSYQLGVSAALRQEARLHRLL 10
           A+   +LLL GA+G+  +     I++H       G +   ++     LR +A+L+ L+
Sbjct: 99  ASMGAVLLLAGAKGKRYALPSSRIMIHQPLGGVRGQATDIEIQAKEILRMKAKLNELI 156


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 26,052,650
Number of Sequences: 219361
Number of extensions: 394791
Number of successful extensions: 1042
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1028
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1042
length of database: 80,573,946
effective HSP length: 37
effective length of database: 72,457,589
effective search space used: 1738982136
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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